Metagenome Family F100684

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100684
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	60 residues
Representative Sequence	MSNINQSPNGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.28 %
% of genes near scaffold ends (potentially truncated)	22.55 %
% of genes from short scaffolds (< 2000 bps)	75.49 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.569 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (30.392 % of family members)
Environment Ontology (ENVO)	Unclassified (81.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (81.373 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.03% β-sheet: 0.00% Coil/Unstructured: 77.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00145	DNA_methylase	2.94
PF07510	DUF1524	1.96
PF13589	HATPase_c_3	0.98
PF01580	FtsK_SpoIIIE	0.98
PF04471	Mrr_cat	0.98
PF11159	DUF2939	0.98
PF00149	Metallophos	0.98
PF05930	Phage_AlpA	0.98
PF13245	AAA_19	0.98
PF00271	Helicase_C	0.98
PF13455	MUG113	0.98
PF12680	SnoaL_2	0.98
PF01661	Macro	0.98
PF16565	MIT_C	0.98
PF00589	Phage_integrase	0.98
PF13517	FG-GAP_3	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.94
COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.98
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
All Organisms	root	All Organisms	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
cellular organisms	root	All Organisms → cellular organisms	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.90 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	2.94 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.96 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.98 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.98 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.90 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	2.94 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.96 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %
PS1 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade	0.98 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1.96 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	1.96 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	1.96 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.98 %
alpha proteobacterium IMCC14465	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → alpha proteobacterium IMCC14465	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bradyrhizobium hipponense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	4.90 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.96 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1.96 %
Fundidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio	1.96 %
Halobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Halobacillus	0.98 %
alpha proteobacterium IMCC14465	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → alpha proteobacterium IMCC14465	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bradyrhizobium hipponense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	4.90 %
unclassified Fundidesulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio	1.96 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.96 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1.96 %
Halobacillus salinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Halobacillus → Halobacillus salinus	0.98 %
alpha proteobacterium IMCC14465	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → alpha proteobacterium IMCC14465	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bradyrhizobium hipponense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	4.90 %
Fundidesulfovibrio sp. SG106	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio → Fundidesulfovibrio sp. SG106	1.96 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.96 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1.96 %
Halobacillus salinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Halobacillus → Halobacillus salinus	0.98 %
alpha proteobacterium IMCC14465	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → alpha proteobacterium IMCC14465	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000864\|OpTDRAFT_1008207	Not Available	699	Open in IMG/M
3300001346\|JGI20151J14362_10065211	Not Available	1459	Open in IMG/M
3300001348\|JGI20154J14316_10063970	Not Available	1421	Open in IMG/M
3300001349\|JGI20160J14292_10243113	Not Available	501	Open in IMG/M
3300004279\|Ga0066605_10188942	Not Available	796	Open in IMG/M
3300005424\|Ga0066826_10138970	Not Available	864	Open in IMG/M
3300005837\|Ga0078893_10080871	All Organisms → cellular organisms → Bacteria	3646	Open in IMG/M
3300005837\|Ga0078893_11036770	Not Available	677	Open in IMG/M
3300005945\|Ga0066381_10079800	Not Available	917	Open in IMG/M
3300006803\|Ga0075467_10382467	Not Available	735	Open in IMG/M
3300009024\|Ga0102811_1288755	Not Available	614	Open in IMG/M
3300009052\|Ga0102886_1156960	Not Available	678	Open in IMG/M
3300009074\|Ga0115549_1277432	Not Available	530	Open in IMG/M
3300009076\|Ga0115550_1026720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio → Fundidesulfovibrio sp. SG106	2639	Open in IMG/M
3300009076\|Ga0115550_1141894	Not Available	846	Open in IMG/M
3300009132\|Ga0118730_1058815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	2799	Open in IMG/M
3300009172\|Ga0114995_10116727	Not Available	1496	Open in IMG/M
3300009172\|Ga0114995_10732547	Not Available	541	Open in IMG/M
3300009420\|Ga0114994_10063143	Not Available	2540	Open in IMG/M
3300009422\|Ga0114998_10131063	Not Available	1217	Open in IMG/M
3300009423\|Ga0115548_1091386	Not Available	1004	Open in IMG/M
3300009425\|Ga0114997_10509306	Not Available	641	Open in IMG/M
3300009425\|Ga0114997_10630674	Not Available	563	Open in IMG/M
3300009425\|Ga0114997_10726485	Not Available	518	Open in IMG/M
3300009428\|Ga0114915_1092527	Not Available	908	Open in IMG/M
3300009432\|Ga0115005_10052794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	3113	Open in IMG/M
3300009434\|Ga0115562_1099188	Not Available	1157	Open in IMG/M
3300009438\|Ga0115559_1065844	Not Available	1498	Open in IMG/M
3300009441\|Ga0115007_10313425	Not Available	1019	Open in IMG/M
3300009441\|Ga0115007_10381278	Not Available	921	Open in IMG/M
3300009467\|Ga0115565_10191494	Not Available	945	Open in IMG/M
3300009505\|Ga0115564_10132983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1351	Open in IMG/M
3300009507\|Ga0115572_10176008	Not Available	1246	Open in IMG/M
3300009512\|Ga0115003_10490450	Not Available	719	Open in IMG/M
3300009526\|Ga0115004_10072884	Not Available	2143	Open in IMG/M
3300009544\|Ga0115006_10460800	Not Available	1113	Open in IMG/M
3300009544\|Ga0115006_11616160	Not Available	589	Open in IMG/M
3300009785\|Ga0115001_10097815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	1923	Open in IMG/M
3300017776\|Ga0181394_1265641	Not Available	511	Open in IMG/M
3300020165\|Ga0206125_10007560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8414	Open in IMG/M
3300020165\|Ga0206125_10046775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2143	Open in IMG/M
3300020165\|Ga0206125_10264809	Not Available	651	Open in IMG/M
3300020166\|Ga0206128_1012804	All Organisms → cellular organisms → Bacteria → Proteobacteria	5205	Open in IMG/M
3300020166\|Ga0206128_1111702	Not Available	1162	Open in IMG/M
3300020169\|Ga0206127_1174391	Not Available	806	Open in IMG/M
3300020175\|Ga0206124_10121256	Not Available	1070	Open in IMG/M
3300020182\|Ga0206129_10005665	All Organisms → cellular organisms → Bacteria	13082	Open in IMG/M
3300020182\|Ga0206129_10032873	All Organisms → cellular organisms → Bacteria → Proteobacteria	3631	Open in IMG/M
3300020185\|Ga0206131_10235924	Not Available	865	Open in IMG/M
3300020187\|Ga0206130_10033386	Not Available	4054	Open in IMG/M
3300020385\|Ga0211677_10210244	Not Available	803	Open in IMG/M
3300020469\|Ga0211577_10623230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	640	Open in IMG/M
3300021084\|Ga0206678_10489728	Not Available	568	Open in IMG/M
3300021085\|Ga0206677_10004233	All Organisms → cellular organisms → Bacteria → Proteobacteria	11803	Open in IMG/M
3300021085\|Ga0206677_10008648	All Organisms → cellular organisms → Bacteria	7380	Open in IMG/M
3300021185\|Ga0206682_10104077	Not Available	1403	Open in IMG/M
3300021371\|Ga0213863_10096733	Not Available	1420	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10029510	All Organisms → cellular organisms → Bacteria → Proteobacteria	2842	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10045991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2116	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10047456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	2074	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10332522	Not Available	580	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10251926	Not Available	757	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10239870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Halobacillus → Halobacillus salinus	875	Open in IMG/M
3300023243\|Ga0222630_1021021	Not Available	1383	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10348174	Not Available	554	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10070641	Not Available	1954	Open in IMG/M
3300024346\|Ga0244775_10804769	Not Available	752	Open in IMG/M
3300025276\|Ga0208814_1096956	Not Available	749	Open in IMG/M
3300025577\|Ga0209304_1133129	Not Available	529	Open in IMG/M
3300025621\|Ga0209504_1106095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio → Fundidesulfovibrio sp. SG106	727	Open in IMG/M
3300025639\|Ga0209495_1089342	Not Available	959	Open in IMG/M
3300025673\|Ga0209494_1097153	Not Available	903	Open in IMG/M
3300025704\|Ga0209602_1136038	Not Available	809	Open in IMG/M
3300025704\|Ga0209602_1141330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	785	Open in IMG/M
3300025705\|Ga0209374_1025905	Not Available	2504	Open in IMG/M
3300025809\|Ga0209199_1126486	Not Available	997	Open in IMG/M
3300025809\|Ga0209199_1160513	Not Available	827	Open in IMG/M
3300025880\|Ga0209534_10121156	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300025886\|Ga0209632_10258000	Not Available	888	Open in IMG/M
3300025897\|Ga0209425_10086150	All Organisms → cellular organisms → Bacteria → Proteobacteria	1913	Open in IMG/M
3300026086\|Ga0207964_1040226	Not Available	1047	Open in IMG/M
3300027714\|Ga0209815_1069647	Not Available	1223	Open in IMG/M
3300027771\|Ga0209279_10128875	Not Available	731	Open in IMG/M
3300027779\|Ga0209709_10011596	All Organisms → cellular organisms → Bacteria	6258	Open in IMG/M
3300027779\|Ga0209709_10119283	Not Available	1346	Open in IMG/M
3300027779\|Ga0209709_10384104	Not Available	562	Open in IMG/M
3300027780\|Ga0209502_10242942	Not Available	804	Open in IMG/M
3300027788\|Ga0209711_10124700	Not Available	1269	Open in IMG/M
3300027810\|Ga0209302_10292316	Not Available	755	Open in IMG/M
3300027849\|Ga0209712_10066009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	2136	Open in IMG/M
3300028284\|Ga0257120_1011588	All Organisms → cellular organisms → Bacteria	3474	Open in IMG/M
3300028284\|Ga0257120_1035999	Not Available	1399	Open in IMG/M
3300031519\|Ga0307488_10056911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → alpha proteobacterium IMCC14465	3000	Open in IMG/M
3300031519\|Ga0307488_10083241	Not Available	2374	Open in IMG/M
3300031594\|Ga0302131_1020766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2743	Open in IMG/M
3300031594\|Ga0302131_1107367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	971	Open in IMG/M
3300031596\|Ga0302134_10167291	Not Available	910	Open in IMG/M
3300031621\|Ga0302114_10203942	Not Available	830	Open in IMG/M
3300031622\|Ga0302126_10246873	Not Available	619	Open in IMG/M
3300031702\|Ga0307998_1087622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	1170	Open in IMG/M
3300032151\|Ga0302127_10141764	Not Available	1138	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.98%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	32.35%
Pelagic	Environmental → Aquatic → Marine → Pelagic	25.49%
Inlet	Environmental → Aquatic → Marine → Inlet	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.80%
Coastal	Environmental → Aquatic → Marine → Coastal	6.86%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.88%
Strait	Environmental → Aquatic → Marine → Strait	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	32.35%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	25.49%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.92%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	30.39%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	14.71%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	10.78%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	8.82%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.88%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	5.88%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.92%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.96%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.96%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.96%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.96%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.96%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.98%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.98%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.98%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.98%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000864	Marine plume microbial communities from the Columbia River - Metatranscriptome 25 PSU	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023243	Saline water microbial communities from Ace Lake, Antarctica - #3	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025639	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300025673	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026086	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028284	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031596	Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCM	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300032151	Marine microbial communities from Western Arctic Ocean, Canada - CB4_SCM	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
OpTDRAFT_10082071	3300000864	Freshwater And Marine	DIKSKPSTANKQRVKVQRLTSQEAQEFRERMGLSNSYLVIGNTIKGGRK*
JGI20151J14362_100652111	3300001346	Pelagic Marine	MSNINQSLNGDSKSKPSTTNKPRLKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK*
JGI20154J14316_100639701	3300001348	Pelagic Marine	LQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQRLTYQEAQEFRERIGLPNSYLVIGNTIKGGRK*
JGI20160J14292_102431132	3300001349	Pelagic Marine	NQSLNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERTGLCDSYLVMSEWACVIAI*
Ga0066605_101889421	3300004279	Marine	MSVIHGSLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0066826_101389701	3300005424	Marine	MSNINQSPNGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK*
Ga0078893_100808715	3300005837	Marine Surface Water	QSTKEDNAMSVIHGSLKGDIKSKPSTANKPRVKVQRLTSQKAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0078893_110367702	3300005837	Marine Surface Water	MSNINQSPKGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRKAILIYPVPLI
Ga0066381_100798001	3300005945	Marine	MLQSTKEDKVMSDINQSPNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK*
Ga0075467_103824672	3300006803	Aqueous	HGSLKGDIKSKPSITNKRRVNVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0102811_12887552	3300009024	Estuarine	MSVTHESLKGDIKSKPSTANKQRVKVQRLTSQEAQEFRERMGLSNSYLVIGNTIKGGRK*
Ga0102886_11569602	3300009052	Estuarine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0115549_12774321	3300009074	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTYQEAQEFRERIGLPNSYLVIGNTIKGGRK*
Ga0115550_10267204	3300009076	Pelagic Marine	LCARILQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQRLTYQEAQEFRERIGLPNSYLVIGNTIKGGRK*
Ga0115550_11418943	3300009076	Pelagic Marine	LCARILQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQLLTSQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0118730_10588151	3300009132	Marine	VMSNINQSLNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0114995_101167272	3300009172	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGHK*
Ga0114995_107325472	3300009172	Marine	MSDINRSPNGDIKSKVVAEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0114994_100631435	3300009420	Marine	LQSTKEDNDMSDINGSPNGDIKSKVVTEAKPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0114998_101310631	3300009422	Marine	MSDINGSPNGDIKSKVVTEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115548_10913862	3300009423	Pelagic Marine	MSVIHESLKGDIKSKPSTANKQRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0114997_105093062	3300009425	Marine	LQSTKEDNDMSDINGSPNGDIKSKVVTEAKPRVKVKHLSPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0114997_106306741	3300009425	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0114997_107264851	3300009425	Marine	MSDNNGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0114915_10925272	3300009428	Deep Ocean	MSDINGSPNGDIKSKVAAVVQPRVNVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115005_100527942	3300009432	Marine	MSDINESPNGDIKSKVATEAKPRVKVKHLTRADPREFNHRMGLSDSYLVIGNTIKGGHK*
Ga0115562_10991882	3300009434	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQKAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0115559_10658442	3300009438	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRPTFQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0115007_103134252	3300009441	Marine	MLRSTKEDNDMSDINGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115007_103812783	3300009441	Marine	MSDINGSPNGDIKSKVVTEARPRVKVKHLSPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115565_101914943	3300009467	Pelagic Marine	MSVIHGSLKGDIKSKPSTANKPRVMVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK*
Ga0115564_101329831	3300009505	Pelagic Marine	KEAKVMSNINQSPNGDSKSKSPTTNKPRVKVKRLTPEEAREFRERMGLSDSYLVIGNTIKGGSK*
Ga0115572_101760083	3300009507	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEIRERMGLPNSYLVIGNTIKGGRK*
Ga0115003_104904502	3300009512	Marine	MSDINGSPNGDIKSKVVTEAKPRLKVKHLTPAETREFNLRMGLSDSYLVIGNTIKGGRK*
Ga0115004_100728844	3300009526	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVRHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115006_104608002	3300009544	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115006_116161601	3300009544	Marine	RLCACISQSTKEDNDMSDINGSPNGDIKSKVVTEARPRVKVKHLSPAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0115001_100978152	3300009785	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKLLTRAETREFNHRMGLSDSYLVIGNTIKGGRK*
Ga0181394_12656411	3300017776	Seawater	MFDIHQSPKGDIKSKPCAANKPSVKLQRLTFQEAQEVRERMDLPNSYLVIGNTIKGGRK
Ga0206125_100075606	3300020165	Seawater	MSNINQSPNGDSKSKSPTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0206125_100467753	3300020165	Seawater	MSNISQSLNGDSKSKSSTTNKPRLKVKRLTPEEAREFPERMGLCDSYLVIGNTIKGGRK
Ga0206125_102648092	3300020165	Seawater	GDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIRGGRK
Ga0206128_10128042	3300020166	Seawater	MSVIHGSLKGDIKSKPSTANKPRVKVQRLTFQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0206128_11117022	3300020166	Seawater	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNAIKGGRK
Ga0206127_11743911	3300020169	Seawater	MSDINQSPKGDSKSKSSTTNKPRVKVKRLTPEEAREFRERMGLSDSYLVIGNIIKGGRK
Ga0206124_101212563	3300020175	Seawater	MSNINQSLNGDSKSKPSTTNKPRLKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0206129_100056657	3300020182	Seawater	MLQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNAIKGGRK
Ga0206129_100328734	3300020182	Seawater	MSNINQSLNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0206131_102359242	3300020185	Seawater	MSDINQSPNGDSKSKSSTTNKPRVKVKRLTPEEAREFRKRMGLCDSYLVIGNTIKGGRK
Ga0206130_100333865	3300020187	Seawater	MSNINQSLNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERTGLCDSYLVIGNTIKGGRK
Ga0211677_102102442	3300020385	Marine	MSVIHELLKGDIKSKPSTTNKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0211577_106232303	3300020469	Marine	GSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNRRMGLSDSYLVIGNTIKGGRK
Ga0206678_104897281	3300021084	Seawater	MSDINQSPNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0206677_100042336	3300021085	Seawater	MSVIHESLKGDIKSKSSTANKPCIKVQRLTFQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0206677_100086484	3300021085	Seawater	MSVIHESLKGDIKSKPSTANKPRAKVQRLTPQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0206682_101040772	3300021185	Seawater	LCARILQSTKEDNVMSVIHESLKGDIKSKSSTANKPCIKVQRLTFQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0213863_100967332	3300021371	Seawater	MSVIHESLKGDIKSKPSTAKKPRVKVQRLTYQEAQEFRERIGLPNSYLVIGNTIKGGRK
(restricted) Ga0233426_100295102	3300022920	Seawater	MSDINESPNGYIKSKVVTEAKPRVKVKHLTRAETQEFNHRMGLSDSYLVIGNTIKGGHK
(restricted) Ga0233426_100459914	3300022920	Seawater	RILQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGSRK
(restricted) Ga0233426_100474561	3300022920	Seawater	MSNINQSPNGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
(restricted) Ga0233426_100931783	3300022920	Seawater	LITSLCARILQSTKEDNVMSVIHESLKGDIKSKRSTANKPRAKVQRLTPQEAQEFRERLGLP
(restricted) Ga0233426_103325221	3300022920	Seawater	LQSTKEDNVMSVIHESLKGDIKSKPSTANKPRAKVQRLTPQEAQEFRERLGLPNSYLVIGNTIKGGRK
(restricted) Ga0233427_102519262	3300022933	Seawater	QSTKEAKVMSNINQSLNGDIESKSSTTNKPRVKVKRLTPDEAREFRERMGLCDSYLVIGNTIKGGRK
(restricted) Ga0233432_102398701	3300023109	Seawater	MSDINQSPNGDSKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0222630_10210211	3300023243	Saline Water	DNDMSDINGSPNGDIKSKVVTEAKPRVKVKYLSPAETREFNHRMGLSDSYLAIGNTIKGGRK
(restricted) Ga0233438_103481742	3300024255	Seawater	MSVIHESLKGDIKSKPSTANKPRVKVQLLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
(restricted) Ga0233444_100706414	3300024264	Seawater	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0244775_108047691	3300024346	Estuarine	MSVTHESLKGDIKSKPSTANKQRVKVQRLTSQEAQEFRERMGLSNSYLVIGNTIKGGRK
Ga0208814_10969562	3300025276	Deep Ocean	MSDINGSPNGDIKSKVAAVVQPRVNVKHLTRAETREFNHRMGLSDS
Ga0209304_11331292	3300025577	Pelagic Marine	MSVIHESLKGDIKSKPSTANKQRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0209504_11060951	3300025621	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTYQEAQEFRERIGLPNSYLVIGNTIKGGRK
Ga0209495_10893422	3300025639	Methane Seep Mesocosm	MSDIYQSPNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLSDSYLVIGNTIKGGRK
Ga0209494_10971532	3300025673	Methane Seep Mesocosm	MSNINQSPNGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNT
Ga0209602_11360383	3300025704	Pelagic Marine	ARIKQSTKEAKVMSNINQSLNGDTKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0209602_11413302	3300025704	Pelagic Marine	MFDIHQSPKGDIKSKPCAANKPSVKVQRLTFQEAQKIRERMDLPNSYLVIGNIIKGGRK
Ga0209374_10259054	3300025705	Marine	MSVIHGSLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0209199_11264862	3300025809	Pelagic Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQKAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0209199_11605131	3300025809	Pelagic Marine	PNGDIKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGSK
Ga0209534_101211562	3300025880	Pelagic Marine	MSNINQSLNGDSKSKPSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0209632_102580002	3300025886	Pelagic Marine	MLQSTKEDNVMSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGGRK
Ga0209425_100861502	3300025897	Pelagic Marine	MSDINQSPNGDSKSKSPTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0207964_10402263	3300026086	Marine	MSDINQSPKGDSKSKSSTTNKPRVKVKRLTPEEAREFRERMGLCDSYLVIGNTIKGGRK
Ga0209815_10696473	3300027714	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209279_101288752	3300027771	Marine	DNDMSDINGSPNGDIKSKVVTEAKPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209709_100115962	3300027779	Marine	MSDNNGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209709_101192832	3300027779	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLSPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209709_103841041	3300027779	Marine	QSTKEDNDMSDINGSPNGDIKSKVVTEARPRVKVKHLSPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209502_102429422	3300027780	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVRHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209711_101247002	3300027788	Marine	MSDINGSPNGDIKSKVVTEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0209302_102923162	3300027810	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNDRMGLSDSYLVIGN
Ga0209712_100660092	3300027849	Marine	MSDINESANGDIKSKVVTEAKPRVKVKHLMRADTREFNHRMGLSDSYLVIGNTIKGGHK
Ga0257120_10115884	3300028284	Marine	MSVIHESLKGDIKSKPSTANKPRVKVQRLTSQEAQEFRERMGLPNSYLVIGNTIKGSRK
Ga0257120_10359991	3300028284	Marine	MSDINESPNGDIKSKVAAEAKPRVKVKHLTRADTREFNHRMGLSDSYLVISNTIKGGHK
Ga0307488_100569114	3300031519	Sackhole Brine	MSDINGSPNGDIKSKAVTEAKPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0307488_100832414	3300031519	Sackhole Brine	MSDINRSPNGDIKSKVVAEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0302131_10207662	3300031594	Marine	MSDINGSPNGDIKSKVVTEAKPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGHK
Ga0302131_11073672	3300031594	Marine	MSDINRSPNGDIKSKVVAEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRKXAALVYPXVPPTSL
Ga0302134_101672912	3300031596	Marine	MSDINRSPNGDIKSKVVAEARPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0302114_102039421	3300031621	Marine	EDNDMSDINRSPNGDIKSKVVAEARPRVKVKHLTPAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0302126_102468731	3300031622	Marine	MSDINRSPNGDIKSKVVTEAEPRVKVKHLTRAETREFNHRMGLSDSYLVIGNTIKGGRK
Ga0307998_10876222	3300031702	Marine	MSDINESPNGHIKSKVVTEAKPRVKVKHLTRADTREFNHRMGLSDSYLVISNTIKGGHK
Ga0302127_101417643	3300032151	Marine	MSDINGAPIGDIKSKVVTEAKPRVKVKHLTCAETREFNHRMGLSDSYLVIGNTIKGGRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters