Metagenome / Metatranscriptome Family F100683

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100683
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MTDHAAAAAEALEKIIAMLRAGHVPEDLGEAVILIGRLMARRT
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	24.51 %
% of genes from short scaffolds (< 2000 bps)	70.59 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (41.176 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.608 % of family members)
Environment Ontology (ENVO)	Unclassified (52.941 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.89% β-sheet: 0.00% Coil/Unstructured: 52.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00271	Helicase_C	29.41
PF13539	Peptidase_M15_4	10.78
PF00182	Glyco_hydro_19	9.80
PF10926	DUF2800	2.94
PF16510	P22_portal	1.96
PF01510	Amidase_2	1.96
PF16793	RepB_primase	0.98
PF00959	Phage_lysozyme	0.98
PF03237	Terminase_6N	0.98
PF04404	ERF	0.98
PF12728	HTH_17	0.98
PF11134	Phage_stabilise	0.98
PF05118	Asp_Arg_Hydrox	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	9.80
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	9.80
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.82 %
Unclassified	root	N/A	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
cellular organisms	root	All Organisms → cellular organisms	36.27 %
Viruses	superkingdom	All Organisms → Viruses	22.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.27 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	21.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	21.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.76 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	21.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.90 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	21.57 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.96 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	19.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.96 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.96 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	19.61 %
Shimia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia	1.96 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.96 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	19.61 %
unclassified Shimia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → unclassified Shimia	1.96 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.96 %
Yuavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Yuavirus	0.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	19.61 %
Nitrospira sp. SG-bin2	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SG-bin2	1.96 %
Shimia sp. WX04	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → unclassified Shimia → Shimia sp. WX04	1.96 %
Alphaproteobacteria virus phiJl001	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Yuavirus → Alphaproteobacteria virus phiJl001	0.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001097\|JGIcombinedJ13537_10111446	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Yuavirus → Alphaproteobacteria virus phiJl001	586	Open in IMG/M
3300002220\|MLSBCLC_10623625	Not Available	761	Open in IMG/M
3300002835\|B570J40625_100525030	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300002930\|Water_100017	Not Available	41566	Open in IMG/M
3300003393\|JGI25909J50240_1033473	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300003394\|JGI25907J50239_1083877	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300003395\|JGI25917J50250_1026627	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300003404\|JGI25920J50251_10043751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300003429\|JGI25914J50564_10015907	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300003429\|JGI25914J50564_10029924	Not Available	1584	Open in IMG/M
3300003429\|JGI25914J50564_10067128	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300004481\|Ga0069718_16240121	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005581\|Ga0049081_10004014	All Organisms → cellular organisms → Bacteria → Proteobacteria	5534	Open in IMG/M
3300005582\|Ga0049080_10146799	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	791	Open in IMG/M
3300006803\|Ga0075467_10397984	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	717	Open in IMG/M
3300006805\|Ga0075464_10190133	Not Available	1217	Open in IMG/M
3300006863\|Ga0075459_1001934	All Organisms → cellular organisms → Bacteria	3316	Open in IMG/M
3300006875\|Ga0075473_10218661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	770	Open in IMG/M
3300006920\|Ga0070748_1361245	Not Available	511	Open in IMG/M
3300007516\|Ga0105050_10017721	Not Available	6741	Open in IMG/M
3300007523\|Ga0105052_10913912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548	Open in IMG/M
3300007559\|Ga0102828_1070886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	827	Open in IMG/M
3300007667\|Ga0102910_1005963	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300008950\|Ga0102891_1019942	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300008995\|Ga0102888_1031712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	996	Open in IMG/M
3300008996\|Ga0102831_1004891	Not Available	5073	Open in IMG/M
3300009037\|Ga0105093_10172914	Not Available	1096	Open in IMG/M
3300009081\|Ga0105098_10040858	Not Available	1859	Open in IMG/M
3300009081\|Ga0105098_10106099	Not Available	1218	Open in IMG/M
3300009085\|Ga0105103_10115600	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1403	Open in IMG/M
3300009160\|Ga0114981_10318291	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300009161\|Ga0114966_10588516	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009169\|Ga0105097_10107781	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1525	Open in IMG/M
3300010157\|Ga0114964_10089459	Not Available	1540	Open in IMG/M
3300010885\|Ga0133913_10514907	All Organisms → cellular organisms → Bacteria → Proteobacteria	3151	Open in IMG/M
3300010885\|Ga0133913_10680426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2694	Open in IMG/M
3300011334\|Ga0153697_1061	Not Available	34735	Open in IMG/M
3300012738\|Ga0157537_155198	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SG-bin2	781	Open in IMG/M
3300013065\|Ga0157547_115812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → unclassified Shimia → Shimia sp. WX04	979	Open in IMG/M
3300016690\|Ga0180048_1080266	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SG-bin2	1001	Open in IMG/M
3300016693\|Ga0180038_1065791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → unclassified Shimia → Shimia sp. WX04	1807	Open in IMG/M
3300017716\|Ga0181350_1018772	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300017716\|Ga0181350_1140053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	570	Open in IMG/M
3300017736\|Ga0181365_1029736	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300017761\|Ga0181356_1065537	Not Available	1227	Open in IMG/M
3300017766\|Ga0181343_1140540	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	675	Open in IMG/M
3300017777\|Ga0181357_1108258	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300017777\|Ga0181357_1156783	Not Available	836	Open in IMG/M
3300017784\|Ga0181348_1008925	All Organisms → cellular organisms → Bacteria → Proteobacteria	4374	Open in IMG/M
3300018405\|Ga0194138_10068307	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300019784\|Ga0181359_1068872	Not Available	1343	Open in IMG/M
3300019784\|Ga0181359_1075268	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300020160\|Ga0211733_10983479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	747	Open in IMG/M
3300021959\|Ga0222716_10000372	Not Available	38276	Open in IMG/M
3300021961\|Ga0222714_10085807	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300022190\|Ga0181354_1026956	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1860	Open in IMG/M
3300022213\|Ga0224500_10280913	Not Available	605	Open in IMG/M
3300023184\|Ga0214919_10363764	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300024343\|Ga0244777_10000359	Not Available	36260	Open in IMG/M
3300025896\|Ga0208916_10010466	All Organisms → cellular organisms → Bacteria	3612	Open in IMG/M
3300025896\|Ga0208916_10479227	Not Available	542	Open in IMG/M
3300027608\|Ga0208974_1096301	Not Available	794	Open in IMG/M
3300027659\|Ga0208975_1000145	Not Available	37065	Open in IMG/M
3300027659\|Ga0208975_1002889	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6683	Open in IMG/M
3300027712\|Ga0209499_1151422	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	847	Open in IMG/M
3300027721\|Ga0209492_1075274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1192	Open in IMG/M
3300027734\|Ga0209087_1006237	Not Available	6340	Open in IMG/M
3300027749\|Ga0209084_1269797	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	653	Open in IMG/M
3300027754\|Ga0209596_1132154	Not Available	1132	Open in IMG/M
3300027754\|Ga0209596_1399554	Not Available	516	Open in IMG/M
3300027759\|Ga0209296_1026674	All Organisms → cellular organisms → Bacteria	3225	Open in IMG/M
3300027770\|Ga0209086_10000801	Not Available	26081	Open in IMG/M
3300027782\|Ga0209500_10043216	Not Available	2455	Open in IMG/M
3300027797\|Ga0209107_10355192	Not Available	677	Open in IMG/M
3300027798\|Ga0209353_10059219	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300027808\|Ga0209354_10202778	Not Available	804	Open in IMG/M
3300027848\|Ga0209390_10446878	Not Available	898	Open in IMG/M
3300027976\|Ga0209702_10015311	All Organisms → cellular organisms → Bacteria	7115	Open in IMG/M
3300028066\|Ga0255200_1012702	Not Available	1452	Open in IMG/M
(restricted) 3300028581\|Ga0247840_10494187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	572	Open in IMG/M
3300031578\|Ga0307376_10123690	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300031787\|Ga0315900_10930223	Not Available	580	Open in IMG/M
3300031951\|Ga0315904_11119609	Not Available	612	Open in IMG/M
3300031952\|Ga0315294_10061545	All Organisms → cellular organisms → Bacteria	3969	Open in IMG/M
3300031952\|Ga0315294_10212198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1916	Open in IMG/M
3300031999\|Ga0315274_11331162	Not Available	698	Open in IMG/M
3300032018\|Ga0315272_10746703	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300032092\|Ga0315905_10003064	All Organisms → cellular organisms → Bacteria → Proteobacteria	17357	Open in IMG/M
3300032092\|Ga0315905_10261443	Not Available	1676	Open in IMG/M
3300032143\|Ga0315292_11377470	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300033816\|Ga0334980_0266218	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300033992\|Ga0334992_0132881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300033993\|Ga0334994_0132778	Not Available	1421	Open in IMG/M
3300033996\|Ga0334979_0195041	Not Available	1198	Open in IMG/M
3300033996\|Ga0334979_0750050	Not Available	506	Open in IMG/M
3300034022\|Ga0335005_0051750	Not Available	2764	Open in IMG/M
3300034062\|Ga0334995_0126699	Not Available	1882	Open in IMG/M
3300034073\|Ga0310130_0019818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2160	Open in IMG/M
3300034101\|Ga0335027_0499693	Not Available	763	Open in IMG/M
3300034104\|Ga0335031_0035359	Not Available	3634	Open in IMG/M
3300034119\|Ga0335054_0000143	Not Available	37016	Open in IMG/M
3300034356\|Ga0335048_0073838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2118	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.06%
Terrestrial	Environmental → Terrestrial	1.96%
Wastewater	Engineered → Wastewater	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.41%
Marine	Environmental → Aquatic → Marine	16.67%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.98%
Soil	Environmental → Terrestrial → Soil	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.98%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.86%
Coastal	Environmental → Aquatic → Marine → Coastal	6.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.90%
Ice	Environmental → Aquatic → Freshwater → Ice	3.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.96%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.98%
River	Environmental → Aquatic → Freshwater → River	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%
Clay	Environmental → Terrestrial → Soil → Clay	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.39%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	24.51%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.86%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.90%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	3.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	12.75%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.88%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	3.92%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.98%
Watersheds	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Watersheds	0.98%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.98%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.98%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001097	Saline microbial communities from Lake Vida, Antarctica (Lake Vida Brine Hole Two - Combined Assembly 2 samples, Mar 2013 Assem)	Environmental	Open in IMG/M
3300002220	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300012738	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES023 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013065	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES037 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016690	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES019 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016693	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES036 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300018405	Freshwater microbial communities from Pennsylvania, USA, analyzing microbe dynamics in response to fracking - TARM_MetaG_T2_14	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300028066	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepB_8h	Environmental	Open in IMG/M
3300028581 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17m	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13537_101114462	3300001097	Hypersaline	MTDHAAATVEALEKVIALLKAGQSPEDLGEAVILLGRMMARRT*
MLSBCLC_106236252	3300002220	Hydrocarbon Resource Environments	MTDHAEAAAILLQAIIDKLKAGETPEDLGREVTLIGRMMERKT*
B570J40625_1005250304	3300002835	Freshwater	MTDHAAAAAEALEKIIAMLRAGHAPEDLGEAVILLGRLMARRT*
Water_10001718	3300002930	Estuary Water	MTDHAEAAALMLEKVADLLRAGRPPEDLGQYVVWIGRMMARKT*
JGI25909J50240_10334733	3300003393	Freshwater Lake	MTDHAAAAAEALEKVLAMLRAGHAPEDLGEAVILLGRLMARRT*
JGI25907J50239_10838772	3300003394	Freshwater Lake	MTDHAAAAAEALEKVLALLRAGHVPEDLGEAVILIGRLMARRT*
JGI25917J50250_10266271	3300003395	Freshwater Lake	MTDHSAAAVEALEKIIAMLRAGHSPEDLGEAVILLGRLMARRT*
JGI25920J50251_100437512	3300003404	Freshwater Lake	MTDHAAAAAEALEKVLAMLRAGHAPEDLGEAVILIGRLMARRT*
JGI25914J50564_100159072	3300003429	Freshwater Lake	MTDHAAAAAEALEKVLAMLRAGHVPEDLGEAVILIGRLMARRT*
JGI25914J50564_100299243	3300003429	Freshwater Lake	YEEMTDHAAAAAEALEKVLAMLRAGHAPEDLGEAVILIGRLMARRT*
JGI25914J50564_100671281	3300003429	Freshwater Lake	MTDHSAAAVEALEKIIAMLRAGHSPEDLGEAVILLGRLMA
Ga0069718_162401212	3300004481	Sediment	MTDHAAATAEALEMVIAMLKAGQSPEDLGPMVILIGRMMARRT*
Ga0049081_100040142	3300005581	Freshwater Lentic	MTDHAAAAAEALEKIIAMLRAGHVPEDLGEAVILIGRLMARRT*
Ga0049080_101467994	3300005582	Freshwater Lentic	MTDHAAATAEALEKIIALLRAGHSPEDLGEAVILIGRMMARRT*
Ga0075467_103979843	3300006803	Aqueous	MTDHAAAAAEALEKILALLRAGHAPEDLGEAVILLGRLMARRT*
Ga0075464_101901332	3300006805	Aqueous	MTDHAAAAAEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT*
Ga0075459_10019344	3300006863	Aqueous	MTDHAAATAEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT*
Ga0075473_102186614	3300006875	Aqueous	VTDHAAAAAEALEKIVALLRAGQPPEDLGPMVILVGRLMARRT*
Ga0070748_13612452	3300006920	Aqueous	MTDHAAATAEALEMVIAMLKAGQSPEDLGPTVILIGRMMARRT*
Ga0105050_100177216	3300007516	Freshwater	MTDHAAATAEALEKIITLLRAGESPEDLGTTVILIGRMMARRT*
Ga0105052_109139123	3300007523	Freshwater	MTDHAAATAEALEKIITLLRAGESPEDLGTTVILIGRMM
Ga0102828_10708863	3300007559	Estuarine	MTDHAAATAEALEKVIAMLRAGQSPEDLGPIVILIGRMMARRT*
Ga0102910_10059636	3300007667	Estuarine	MTDHAAATVEALEELIALLRAGYSPEDLGDAVILLG
Ga0102891_10199425	3300008950	Estuarine	MTDHAAATVEALEELIALLRAGYSPEDLGDAVILLGRLMARRT*
Ga0102888_10317124	3300008995	Estuarine	MTDHAAATVEALEELIALLRAGYSPEDLGDAVILLGRLMAR
Ga0102831_10048917	3300008996	Estuarine	MTDHAEAAAEALEAIVAMLKAGYPPEDLGKDVILVGRLMARRT*
Ga0105093_101729143	3300009037	Freshwater Sediment	MTDHAAATVEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT*
Ga0105098_100408582	3300009081	Freshwater Sediment	MTDHAAASAEALEMVIAMLRAGRPPEDLGPIVILIGRMMARRT*
Ga0105098_101060991	3300009081	Freshwater Sediment	MTDHAAATAEALEMVIAMLRAGQSPEDLGPMVILIGRMMAR
Ga0105103_101156004	3300009085	Freshwater Sediment	MTDHAEAAAEALEKMTALLRAGQSPEDLGPMVILIGRMMARRT*
Ga0114981_103182911	3300009160	Freshwater Lake	MTDHAAATVEALEKIIALLRAGHAPEDLGEAVILLGRLMARRT*
Ga0114966_105885163	3300009161	Freshwater Lake	MTDHAAATVEALEKIIALLRAGHVPEDLGEAVILLGRLMARRT*
Ga0105097_101077815	3300009169	Freshwater Sediment	VEEMTDHAAATAEALEMVIAMLKAGQSPEDLGPMVILIGRMMARRT*
Ga0114964_100894593	3300010157	Freshwater Lake	MTDHAEAAALMLEKVADLLRAGRPPEDLGELVVLIGRMMARRT*
Ga0133913_105149074	3300010885	Freshwater Lake	VTDHAEAAALMLEKVADLLRAGRPPEDLGQYVVWIGRMMARKT*
Ga0133913_106804267	3300010885	Freshwater Lake	VTDHAEAAALMLEKVADLLRAGRPPEDLGELVVLIGRMMARRT*
Ga0153697_106147	3300011334	Freshwater	MTDHAAATAEALEKVIAMLKAGQSPEDLGSMVILIGRMMARRT*
Ga0157537_1551983	3300012738	Freshwater	RDRAMTDHAEAAALMLEKVADLLRAGRSPEDLGQYVVWIGRMMARKT*
Ga0157547_1158121	3300013065	Freshwater	LMLEKVADLLRAGRSPEDLGQYVVWIGRMMARKT*
Ga0180048_10802663	3300016690	Freshwater	MTDHAEAAALMLEKVADLLRAGRSPEDLGQYVVWIGRMMARKT
Ga0180038_10657916	3300016693	Freshwater	DHAEAAALMLEKVADLLRAGRSPEDLGQYVVWIGRMMARKT
Ga0181350_10187723	3300017716	Freshwater Lake	VDKQMTDHADAAAAALEKVIAMLLAGHPPEDLGEAVILIGRMMARRT
Ga0181350_11400532	3300017716	Freshwater Lake	MTDHAAAAAEALEKIIAMLRAGHVPENLGEAVILIGRLMARRT
Ga0181365_10297363	3300017736	Freshwater Lake	MTDHAEATAEALERIIALLRANVPPEDLGRQVQIIGRMMERRT
Ga0181356_10655372	3300017761	Freshwater Lake	AAAAAEALEKVLALLRAGHVPEDLGEAVILIGRLMARRT
Ga0181343_11405401	3300017766	Freshwater Lake	MTDHAEATVEALEKIIALLRAGHSPEDLGEAVILIGRMMARRT
Ga0181357_11082582	3300017777	Freshwater Lake	MTDHAEATAEALERVIALLRANVPPEDLGRQVQIIGRMMERRT
Ga0181357_11567832	3300017777	Freshwater Lake	MTDHADAAAAALEKVIAMLLAGHPPEDLGEAVILIGRMMARRT
Ga0181348_10089253	3300017784	Freshwater Lake	MTDHAAAAVEAMEKIIAMLRAGHSPEDLGEAVILIGRLMARRT
Ga0194138_100683071	3300018405	Watersheds	MTDHAAATVEALEKILALLRAGHAPEDLGEAVILLGRLMARRT
Ga0181359_10688722	3300019784	Freshwater Lake	MTDHSAAAVEALEKIIAMLRAGHSPEDLGEAVILLGRLMARRT
Ga0181359_10752682	3300019784	Freshwater Lake	MTDHAAAAAEALEKIIALLRAGHAPEDLGEAVILIGRLMARRT
Ga0211733_109834792	3300020160	Freshwater	MTDHAEAAAEALEKVIAMLRAGHAPEDLGEAVILIGRMMARRT
Ga0222716_1000037236	3300021959	Estuarine Water	MTDHAEAAVEMLEQIIEGLRAGYSPEDLGPLVVLIGRLMARRT
Ga0222714_100858072	3300021961	Estuarine Water	MTDHAAATVEALEKVLALLRAGHSPEDLGETVILLGRLMARRT
Ga0181354_10269562	3300022190	Freshwater Lake	MTDHAAAAAEALEKVLAMLRAGHAPEDLGEAVILIGRLMARRT
Ga0224500_102809132	3300022213	Sediment	MIDHAEAAVEMLEQIIEGLRAGYSPEDLGPLVVLIGRLMARRT
Ga0214919_103637642	3300023184	Freshwater	MTDHAEAAAVMLEKVAALLRAGHAPEDLGEAVILLGRLMARRT
Ga0244777_1000035923	3300024343	Estuarine	MTDHAAATVEALEELIALLRAGYSPEDLGDAVILLGRLMARRT
Ga0208916_100104661	3300025896	Aqueous	MTDHAAAAAEALEKVLALLRAGHVPEDLGEAVILI
Ga0208916_104792272	3300025896	Aqueous	MTDHAAAAAEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT
Ga0208974_10963012	3300027608	Freshwater Lentic	DHAAAAAEALEKVLALLRAGHVPEDLGEAVILIGRLMARRT
Ga0208975_100014536	3300027659	Freshwater Lentic	MTDHAAAAAEALEKVLALLRAGHVPEDLGEAVILIGRLMARRT
Ga0208975_10028893	3300027659	Freshwater Lentic	MTDHAAAAAEALEKIIAMLRAGHAPEDLGEAVIILGRLMARRT
Ga0209499_11514221	3300027712	Freshwater Lake	VTDHAEAAALMLEKVADLLRAGRPPEDLGELVVLIGRMMARRT
Ga0209492_10752743	3300027721	Freshwater Sediment	MTDHAEAAAEALEKMTALLRAGQSPEDLGPMVILIGRMMARRT
Ga0209087_10062373	3300027734	Freshwater Lake	MTDHAEAAALMLEKVADLLRAGRPPEDLGELVVLIGRMMARRT
Ga0209084_12697973	3300027749	Freshwater Lake	VTDHAEAAALMLEKVADLLRAGRPPEDLGELVVLIGR
Ga0209596_11321541	3300027754	Freshwater Lake	TDHAAAAAEALEKVLAMLRAGHVPEDLGEAVILIGRLMARRT
Ga0209596_13995543	3300027754	Freshwater Lake	MTDHAAATVEALEKIIALLRAGHAPEDLGEAVILLGRLMARRT
Ga0209296_10266741	3300027759	Freshwater Lake	MTDHAAATVEALEKIIALLRAGHVPEDLGEAVILLGRLMARRT
Ga0209086_100008013	3300027770	Freshwater Lake	MTDHAAAAAEALEKVLAMLRAGHVPEDLGEAVILIGRLMARRT
Ga0209500_100432163	3300027782	Freshwater Lake	MTDHAAAAAEALEKIIAMLRAGHVPEDLGDDVILIGRLMARRT
Ga0209107_103551922	3300027797	Freshwater And Sediment	MTDHAAAAAEALENIIAMLRAGHAPEDLGEAVIILGRLMARRT
Ga0209353_100592192	3300027798	Freshwater Lake	MTDHADAAAEALEKVLAMLRAGHAPEDLGEAVILIGRLMARRT
Ga0209354_102027782	3300027808	Freshwater Lake	AAAVEAMEKIIAMLRAGHSPEDLGEAVILIGRLMARRT
Ga0209390_104468782	3300027848	Freshwater	MTDHAAATVEALEKVIALLKAGQSPEDLGEAVILLGRMMARRT
Ga0209702_100153117	3300027976	Freshwater	MTDHAAATAEALEKIITLLRAGESPEDLGTTVILIGRMMARRT
Ga0255200_10127024	3300028066	Freshwater	EMTDHAAATAEALEMVIAMLKAGQSPEDLGPMVILIGRMMARRT
(restricted) Ga0247840_104941873	3300028581	Freshwater	MTDHAAAAVEAMEKIIAMLRAGVSPEDLGEAVILLGRLMARRT
Ga0307376_101236903	3300031578	Soil	MTDHAAAAAEALEKVVAMLRAGVSPEDLGEAVILIGRLMARRT
Ga0315900_109302232	3300031787	Freshwater	MTDHAEAAAEALEKITALLRAGGSPEDLGPWVILLGRMMARKT
Ga0315904_111196093	3300031951	Freshwater	HAEAAALALEKMAALLRAGRPPEELGADVVLIGRMMARRT
Ga0315294_100615451	3300031952	Sediment	MTDHAAAAVEALEKIIAMLRAGHVPENLGEAVILI
Ga0315294_102121985	3300031952	Sediment	MTDHAAAAVEALEKIIAMLRAGHVPENLGEAVILIGRLMARRT
Ga0315274_113311623	3300031999	Sediment	MTDHAAAAAEALEKILALLRAGHAPEDLGEGVILLGRLMARRT
Ga0315272_107467031	3300032018	Sediment	EEMTDHAAAAVEALEKIIAMLRAGHVPENLGEAVILIGRLMARRT
Ga0315905_1000306418	3300032092	Freshwater	MTDHAAAAAEALEKILALLRAGHSPEDLGEAVVLLGRLMARRT
Ga0315905_102614433	3300032092	Freshwater	MTDHAEAAAEALEAIVDLLKAGYPPEDLGEDVILVGRLMARRT
Ga0315292_113774701	3300032143	Sediment	MTDHAAATVEALEKIIAMLRAGHVPENLGEAVILIGRLMARRT
Ga0334980_0266218_559_672	3300033816	Freshwater	MTDHAAATAEALEMVIAMLKAGQSPEDLGPMVILIGRM
Ga0334992_0132881_290_421	3300033992	Freshwater	VTDHAEAAALLLEAVAAKLRAGFPPEDLGREVALIGRMMERKT
Ga0334994_0132778_788_919	3300033993	Freshwater	MTDHAAAAAEALEKIIAMLRAGHAPEDLGEAVILLGRLMARRT
Ga0334979_0195041_211_342	3300033996	Freshwater	MTDHAAATAEALEMVIAMLRAGQSPEDLGPIVILIGRMMARRT
Ga0334979_0750050_359_505	3300033996	Freshwater	DEVEEMTDHAAATAEALEMVIAMLKAGQSPEDLGPMVILIGRMMARRT
Ga0335005_0051750_335_466	3300034022	Freshwater	MTDHAAAAAEALEKIIAMLRAGYAPEDLGEAVILLGRLMARRT
Ga0334995_0126699_1_117	3300034062	Freshwater	AAAAEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT
Ga0310130_0019818_2005_2136	3300034073	Fracking Water	MTDHAEAAAIMLEKMAALLRAGRPPEDLGEMVVLIGRMMARKT
Ga0335027_0499693_1_126	3300034101	Freshwater	DHAAATAEALEKVIAMLKAGQSPEDLGPMVILIGRMMARRT
Ga0335031_0035359_2368_2499	3300034104	Freshwater	MTDHAAATAEALEKVIAMLKAGQSPEDLGPIVILIGRMMARRT
Ga0335054_0000143_18996_19127	3300034119	Freshwater	MTDHAAAAAEALDKIIAMLRAGHVPEDLGEAVILIGRLMARRT
Ga0335048_0073838_652_783	3300034356	Freshwater	VTDHAEAAALLLEAVVAKLRAGFPPEDLGREVALIGRMMERKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters