NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F100677

Metagenome / Metatranscriptome Family F100677

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100677
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 44 residues
Representative Sequence VALTSAREKMEFEITPFFPYLTRLSTGGTEKVALTTTSPSQTEQK
Number of Associated Samples 90
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 98.04 %
% of genes from short scaffolds (< 2000 bps) 96.08 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.098 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(34.314 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.804 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 16.44%    Coil/Unstructured: 83.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00196GerE 31.37
PF07730HisKA_3 1.96
PF01435Peptidase_M48 0.98
PF11154DUF2934 0.98
PF00356LacI 0.98
PF02518HATPase_c 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 1.96
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 1.96
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 1.96
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 1.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.10 %
UnclassifiedrootN/A4.90 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig177680All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8615Open in IMG/M
3300001546|JGI12659J15293_10027067All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300001686|C688J18823_10707066All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300004120|Ga0058901_1475302All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300004268|Ga0066398_10161873All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300004476|Ga0068966_1416790All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300004603|Ga0068918_1241283All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005435|Ga0070714_100699960All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter978Open in IMG/M
3300005534|Ga0070735_10342651All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter897Open in IMG/M
3300005542|Ga0070732_10774822All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8585Open in IMG/M
3300005542|Ga0070732_11008762All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005575|Ga0066702_10196161All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1220Open in IMG/M
3300005610|Ga0070763_10108748All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300005921|Ga0070766_10727708All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300006162|Ga0075030_100778683All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300006162|Ga0075030_101228143All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300006804|Ga0079221_10873920All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009012|Ga0066710_104453744All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8523Open in IMG/M
3300009523|Ga0116221_1157013All Organisms → cellular organisms → Bacteria → Acidobacteria990Open in IMG/M
3300010339|Ga0074046_10704108All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8593Open in IMG/M
3300010361|Ga0126378_11003135All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300010376|Ga0126381_102877876All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300010379|Ga0136449_101052268All Organisms → cellular organisms → Bacteria → Acidobacteria1302Open in IMG/M
3300010999|Ga0138505_100015549All Organisms → cellular organisms → Bacteria → Acidobacteria928Open in IMG/M
3300011075|Ga0138555_1011014All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8506Open in IMG/M
3300011085|Ga0138581_1106477All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300011120|Ga0150983_14408211All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8510Open in IMG/M
3300012208|Ga0137376_10105732All Organisms → cellular organisms → Bacteria → Acidobacteria2389Open in IMG/M
3300012212|Ga0150985_100741486All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8663Open in IMG/M
3300012212|Ga0150985_102787190Not Available590Open in IMG/M
3300012384|Ga0134036_1036790All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8517Open in IMG/M
3300012469|Ga0150984_104157172All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8515Open in IMG/M
3300012971|Ga0126369_10245027All Organisms → cellular organisms → Bacteria → Acidobacteria1760Open in IMG/M
3300012986|Ga0164304_11515140All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8555Open in IMG/M
3300012989|Ga0164305_11848654All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8547Open in IMG/M
3300014164|Ga0181532_10546519All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8632Open in IMG/M
3300016700|Ga0181513_1299196All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8526Open in IMG/M
3300017823|Ga0187818_10288512Not Available720Open in IMG/M
3300017933|Ga0187801_10057318All Organisms → cellular organisms → Bacteria → Acidobacteria1425Open in IMG/M
3300017942|Ga0187808_10236070All Organisms → cellular organisms → Bacteria → Acidobacteria817Open in IMG/M
3300017959|Ga0187779_11330649All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8509Open in IMG/M
3300017972|Ga0187781_11325297Not Available531Open in IMG/M
3300017994|Ga0187822_10179247Not Available696Open in IMG/M
3300018006|Ga0187804_10462352All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8567Open in IMG/M
3300018047|Ga0187859_10449762All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300018058|Ga0187766_10984118All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8600Open in IMG/M
3300019258|Ga0181504_1008058All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8654Open in IMG/M
3300019258|Ga0181504_1240970All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8609Open in IMG/M
3300019270|Ga0181512_1467344All Organisms → cellular organisms → Bacteria → Acidobacteria1021Open in IMG/M
3300019278|Ga0187800_1332699All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8505Open in IMG/M
3300019278|Ga0187800_1550819All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300019888|Ga0193751_1047820All Organisms → cellular organisms → Bacteria → Acidobacteria1863Open in IMG/M
3300020580|Ga0210403_11409088All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8528Open in IMG/M
3300021420|Ga0210394_10128289All Organisms → cellular organisms → Bacteria → Acidobacteria2198Open in IMG/M
3300021477|Ga0210398_11086771All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8636Open in IMG/M
3300021477|Ga0210398_11249681All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8585Open in IMG/M
3300021478|Ga0210402_11272104All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300022498|Ga0242644_1030946Not Available575Open in IMG/M
3300022500|Ga0242643_122459All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8521Open in IMG/M
3300022508|Ga0222728_1105668All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8538Open in IMG/M
3300022508|Ga0222728_1107000All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8536Open in IMG/M
3300022522|Ga0242659_1033735All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300022533|Ga0242662_10072633All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M
3300022714|Ga0242671_1122046All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8515Open in IMG/M
3300022717|Ga0242661_1100747All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8604Open in IMG/M
3300022724|Ga0242665_10203719All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8653Open in IMG/M
3300022726|Ga0242654_10138654All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300022726|Ga0242654_10178887All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300022726|Ga0242654_10211467All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8679Open in IMG/M
3300026078|Ga0207702_10533975All Organisms → cellular organisms → Bacteria → Acidobacteria1146Open in IMG/M
3300027516|Ga0207761_1013768All Organisms → cellular organisms → Bacteria → Acidobacteria1705Open in IMG/M
3300027629|Ga0209422_1159471All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8504Open in IMG/M
3300027641|Ga0208827_1059659All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_81243Open in IMG/M
3300027867|Ga0209167_10086122All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_81590Open in IMG/M
3300027867|Ga0209167_10726838All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8542Open in IMG/M
3300027884|Ga0209275_10248832All Organisms → cellular organisms → Bacteria → Acidobacteria974Open in IMG/M
3300027884|Ga0209275_10812558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8539Open in IMG/M
3300027986|Ga0209168_10240526All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis897Open in IMG/M
3300028906|Ga0308309_10375668All Organisms → cellular organisms → Bacteria → Acidobacteria1215Open in IMG/M
3300030528|Ga0210277_10996991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8512Open in IMG/M
3300030545|Ga0210271_10155930All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8541Open in IMG/M
3300030596|Ga0210278_1115846All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8622Open in IMG/M
3300030626|Ga0210291_11458555All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8571Open in IMG/M
3300030707|Ga0310038_10159522All Organisms → cellular organisms → Bacteria → Acidobacteria1113Open in IMG/M
3300030738|Ga0265462_11236302All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8670Open in IMG/M
3300030743|Ga0265461_13368488All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8540Open in IMG/M
3300030847|Ga0075405_11923444All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8582Open in IMG/M
3300031057|Ga0170834_100248210All Organisms → cellular organisms → Bacteria → Acidobacteria1188Open in IMG/M
3300031057|Ga0170834_112127270All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300031231|Ga0170824_105118264All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8501Open in IMG/M
3300031233|Ga0302307_10650248All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8530Open in IMG/M
3300031249|Ga0265339_10347093All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8700Open in IMG/M
3300031715|Ga0307476_10031885All Organisms → cellular organisms → Bacteria3508Open in IMG/M
3300031823|Ga0307478_11751747All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8511Open in IMG/M
3300031866|Ga0316049_115809All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8584Open in IMG/M
3300031962|Ga0307479_11295720All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300032180|Ga0307471_100897246All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300032515|Ga0348332_11683971All Organisms → cellular organisms → Bacteria → Acidobacteria2414Open in IMG/M
3300032782|Ga0335082_10519760All Organisms → cellular organisms → Bacteria → Acidobacteria1052Open in IMG/M
3300032898|Ga0335072_11535057All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8566Open in IMG/M
3300032954|Ga0335083_11194242All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8590Open in IMG/M
3300033887|Ga0334790_207122All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8560Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.53%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.84%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil5.88%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.94%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.96%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.98%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.98%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.98%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.98%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.98%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.98%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.98%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.98%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004603Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011075Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011085Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012384Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300016700Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022500Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030545Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030596Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031866Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_022847102140918007SoilALTLAREKMEFEITPFFPYLTRLSTGGTEKVALTTPSPSQTEQK
JGI12659J15293_1002706743300001546Forest SoilLTSSREKMEFEITPFFPHLTRLSSGTEKVALTTTSPASGNEAK*
C688J18823_1070706623300001686SoilVELSKAKPVALTSAREKLEFEITPFFPYLTRLSAGNNEKMAQTAPAAAENQPK*
Ga0058901_147530213300004120Forest SoilLSKAKPVTLALAREKMEFEITPFFPYLTRVSTGGIEKVALTTASPSQTEQK*
Ga0066398_1016187313300004268Tropical Forest SoilKPVALTSAREKMEFEITPFFPYLTRIQTDGEKVALQTTSRENAAAK*
Ga0068966_141679033300004476Peatlands SoilAREKMEFEITPFFPYLTRLSAGGADKVALTTSSPSQAEQK*
Ga0068918_124128313300004603Peatlands SoilSAREKMEFEITPFFPYLTRLSTGGAEKVALTTSSPSQTEQK*
Ga0070714_10069996033300005435Agricultural SoilALTSAREKLEFEITPFFPYLTRSSSGGEKMAQTKPASTENQPK*
Ga0070735_1034265113300005534Surface SoilWSDQAELSKAKPVALTSSREKMEFEITPFFPYITRISTGAEKVALTTTGTPVANQPK*
Ga0070732_1077482213300005542Surface SoilFGITPFFPYLNRFSTGSTEKMALTTSNPSAQAPEQK*
Ga0070732_1100876223300005542Surface SoilPVALTSAREKMEFEITPVFPYLTRLSVDGAEKVALTTTSSASAEQK*
Ga0066702_1019616113300005575SoilTVALTSSREKMEFEITPFFPYLTRNSAGGTEKVAVTTATPTATSAPEQK*
Ga0070763_1010874813300005610SoilEKMEFEITPFFPFLTRVSTGTEKVALTTTERSGSDAK*
Ga0070766_1072770823300005921SoilAKPVALTSAREKMEFEITPFFPFLTRVSTGTEKVALTTTERSGSDAK*
Ga0075030_10077868313300006162WatershedsPVALTSAREKMEFEITPFFPYLTRFSTAGTEKVALTTTSPSATEQK*
Ga0075030_10122814323300006162WatershedsLSKAKAVALTSPREKMEFEVAPFFPYLTRISTGGTEKVALSTTSTTPSTPEQK*
Ga0079221_1087392013300006804Agricultural SoilQVELTKAKPVALTSAREKLEFEITPFFPYVTRLSSGGEKMAQTTPASAENHSK*
Ga0066710_10445374423300009012Grasslands SoilSAREKIEFAITPFFPHLTRLSTGGIEKVAQTTPSPSQSEQK
Ga0116221_115701313300009523Peatlands SoilVALTSAREKMEFEITPFFPYLTRLSAGGAEKVALTTSTPSQAEQK*
Ga0074046_1070410813300010339Bog Forest SoilEKMEFEITPFFPYLTRISTGGEKVALSTTGSAPEPK*
Ga0126378_1100313533300010361Tropical Forest SoilSAHEKMEFEITPFFPYLTRMATGATEKMALTTTTPASDGGQK*
Ga0126381_10287787613300010376Tropical Forest SoilALTSAREKMEFEITPFFPYLTRLSTGGSEKMALTATSPGVQTQQK*
Ga0136449_10105226833300010379Peatlands SoilSAREKMEFEITPFFPYLTRLSAGGADKVALTTSSPSQAEQK*
Ga0138505_10001554923300010999SoilSKAKQVALTSAKEKMEFELTPFFPHLSRLSNSPDKVALTTSSQSENEAK*
Ga0138555_101101413300011075Peatlands SoilKMEFEITPFFPYLTRLSAGGADKVALTTSSPSQAEQK*
Ga0138581_110647713300011085Peatlands SoilEFEITPFFPYLTRLSAGGAEKVALTTSTPSQAEQK*
Ga0150983_1440821123300011120Forest SoilSKAKPVALTAAREKMEFEITPVFPYLSRFSTGGAEKMALTTSSPSENTPK*
Ga0137376_1010573213300012208Vadose Zone SoilELSKAKPVQLTSAREKMEFEITPVFLYLTRMTTGGTEKMALTTTTPAAETTPK*
Ga0150985_10074148613300012212Avena Fatua RhizosphereSKAKPVALTSAREKLEFEITPFFPYLTRLSTGGAEKMAQTSTAPAENQRK*
Ga0150985_10278719033300012212Avena Fatua RhizosphereAREKMEFEITPFFPYLTRITTGQADKMALTTATPAGESSPK*
Ga0134036_103679023300012384Grasslands SoilVELTKAKPVALTSAREKLEFEITPFFPYLTRLSSGGEKMAQTTPASAENQPK*
Ga0150984_10415717213300012469Avena Fatua RhizosphereKPVALTSAREKLEFEITPFFPYLTRLSTGGAEKMAQTSTAPAENQRK*
Ga0126369_1024502743300012971Tropical Forest SoilVALTSAREKMEFEITPFFPYLTRIQTDGEKVALQTTSRENAAAK*
Ga0164304_1151514013300012986SoilKAKPVALTSAREKLEFEITPFFPYLTRLSSGGEKMAQTTPASAENQPK*
Ga0164305_1184865413300012989SoilDQVELTKAKPVALTSAREKLEFEITPFFPYLTRLSSGGEKMAQTTPASAENQPK*
Ga0181532_1054651913300014164BogITPFFPYLTRLSANGTEKVALTAGSPAPAPTQQK*
Ga0181513_129919613300016700PeatlandALTSAREKMEFEITPFFPYLTRLSASGTEKVALTTGSPSQTQQK
Ga0187818_1028851223300017823Freshwater SedimentREKMEFEITPFLPYLTRLSNGGTKKTALNAASPDATPAK
Ga0187801_1005731813300017933Freshwater SedimentEKMEFEITPFFPYLTRLATGGTEKMALTTTTPAADTTPK
Ga0187808_1023607013300017942Freshwater SedimentAKPVPLTSAREKMEFEITPFFPYLTRLATGGTEKMALTTTTPAADTTPK
Ga0187779_1133064923300017959Tropical PeatlandAREKMEFEITPFFPYLTRLSTGGAEKVALTTTSPEHDQPK
Ga0187781_1132529713300017972Tropical PeatlandKPVALASAREKMEFEITPFFPYLIRLSGPVVQKVALTTTVPSAPAQK
Ga0187822_1017924713300017994Freshwater SedimentVALTSQKEKMEFEITPFFPYLTRFPTGGTDKVALTTTTQSGTEEK
Ga0187804_1046235233300018006Freshwater SedimentALASPREKMEFEITPFFPYLTRLSSRTAEKVALTTSAPSAAEHK
Ga0187859_1044976223300018047PeatlandASEKRPFEITPFFPYLSRVTNSGAEKVALASPPAE
Ga0187766_1098411823300018058Tropical PeatlandEKMEFEITPFFPHLTRLSTGNTEKVALTSTSPASNQQK
Ga0181504_100805823300019258PeatlandVALTSSREKMEFEITPFFPHLTRLSSGTEKVALTTTSPASGNEAK
Ga0181504_124097013300019258PeatlandEITPFFPYLTRLSADGAEKAALTTSAPSSAVRNKK
Ga0181512_146734433300019270PeatlandSVKEKMEFEITPFFPYLTRLSSGGAEKVALTTSAPTQTK
Ga0187800_133269913300019278PeatlandLSKAKPVALVSAHEKMEFEITPFFPYLTRLSTGGEKVALTNSAPASDGAPK
Ga0187800_155081913300019278PeatlandLTSAHEKMEFEITPFFPYLTRISTGGEKMALTTSSPQPQNTPK
Ga0193751_104782023300019888SoilMEFEITPFFPYLTRLSTGGIEKVAQTTTSQSETEQK
Ga0210403_1140908813300020580SoilPVTLALAREKMEFEITPFFPYLTRVSTGGIEKVALTTASPSQTEQK
Ga0210394_1012828943300021420SoilALTSAREKMEFEITPFFPYLTRIGTGGEKMALSSSSSAAPQSAPK
Ga0210398_1108677123300021477SoilELSKAKPVALLSAHEKMEFEISPFFPYLTRFANGSAEKVARTTTSSPSDTEPK
Ga0210398_1124968123300021477SoilELSKAKPVALTSAREKMEFEITPLFPYLVRLSAGGADKVALTTTLPSQTQQK
Ga0210402_1127210413300021478SoilREKMEFEITPFFPYLTRLSTGGTEKVALTTSSPSK
Ga0242644_103094613300022498SoilAREKMEFEITPFFPYLMRLSANGTDKVALTTGSPSQTQQK
Ga0242643_12245913300022500SoilKMEFEITPFFPYLMRLSANGTDKVALTTGSPSQTQQK
Ga0222728_110566823300022508SoilEFEITPFFPYLTRLSTGGTEKVALTTASPSQSEQK
Ga0222728_110700023300022508SoilLSKAKPVALLSAHEKMEFEISPFFPYLTRFANGSAEKVARTTTSSPSDTEPK
Ga0242659_103373513300022522SoilEKMEFEITPVFPYLVRFPSGNGENVALTTSSPSENSQK
Ga0242662_1007263333300022533SoilVELSKAKPVTLALAREKMEFEITPFFPYLTRVSTGGIEKVALTTASPSQTEQK
Ga0242671_112204623300022714SoilVALTSAHEKMEFGITPFFPYLTRLSTGGAEKVALTTTPSAPIEPAQK
Ga0242661_110074723300022717SoilELNKSKPVALTSAREKMEFEITPFFPYLMRLSANGTDKVALTTGSPSQTQQK
Ga0242665_1020371913300022724SoilKMEFEITPFFPYLTRLSTGGAEKVALTTSSPSQTEQK
Ga0242654_1013865413300022726SoilAREKMEFEITPFFPYLTRLSTGGAEKVALTTGSPSQTQQK
Ga0242654_1017888733300022726SoilAKAKLVALNSAREKMEFEITPFFPHLTRTATAGAEKVAQTTSTPEQK
Ga0242654_1021146733300022726SoilEFEITPFFPYLTRLSTGGTEKVAQTTTSQSETEQK
Ga0207702_1053397513300026078Corn RhizosphereQVELTKAKPVALTSAREKLEFEITPFFPYLTRLSSGGEKMAQTTPASAENHPK
Ga0207761_101376843300027516Tropical Forest SoilVALTSAREKMEFEITPFFPYLTRLSTGGTDKVALTTSSPSAAEQK
Ga0209422_115947113300027629Forest SoilLTSAKEKLEFEITPFFPYLTRFSSGGSEKVALTTQSPSENTQK
Ga0208827_105965913300027641Peatlands SoilKAVALTSAREKMEFEITPFFPYLTRLSTGSEKVALTTSTPSAPEQK
Ga0209167_1008612233300027867Surface SoilEKMEFGITPFFPYLSRFSTGSPEKVALTTSTPSQPDPAPQQK
Ga0209167_1072683813300027867Surface SoilEFEITPFFPYLARLALNSTEKVALTTAAQQGSTPK
Ga0209275_1024883233300027884SoilLEFEITPFFPYLTRFSSGGSEKVALTTQSPSENTQK
Ga0209275_1081255813300027884SoilLSKAKPVTLALAREKMEFEITPFFPYLTRVSTGGIEKVALTTASPSQTEQK
Ga0209168_1024052613300027986Surface SoilWSDQAELSKAKPVALTSSREKMEFEITPFFPYITRISTGAEKVALTTTGTPVANQPK
Ga0308309_1037566813300028906SoilELAKAKPVALTSARENIPFEITPFFPYLTRLSAAGSEKVALTTPSPK
Ga0210277_1099699113300030528SoilREKMEFEITPFFPYLTRISVNGTDKVALTTGSPSQTGQK
Ga0210271_1015593013300030545SoilELSKAKPVTLALAREKMEFEITPFFPYLTRVSTGGIEKVALTTGSPSQTEQK
Ga0210278_111584633300030596SoilAKTVALTSAHEKMEFGITPFFPYLTRFATGNQEKVALTTSTPSQPEQK
Ga0210291_1145855523300030626SoilMEFEITPFFPYLTRVSTGGIEKVALTTGSPSQTEQK
Ga0310038_1015952233300030707Peatlands SoilLTSAREKMEFEITPFFPYLTRLSAGGADKVALTTSSPSQAEQK
Ga0265462_1123630233300030738SoilLTSAREKMEFEITPFFPYLTRLATVGAEKVALTTTERSAAEQK
Ga0265461_1336848813300030743SoilLSKAKPVALTSAREKLELEITPFFPYLTRLSTGGTEKVALTTTSPSQAEQK
Ga0075405_1192344413300030847SoilPVALTSAKEKMEFEITPFFPYLTRLPNGGTDKMALTTSTPSQTEQK
Ga0170834_10024821013300031057Forest SoilVALTSAKEKMEFEITPFFPYLTRVSSGIEKVALTTASPSEQK
Ga0170834_11212727033300031057Forest SoilAREKMEFEITPVFPYLSRFSTGGAEKMALTTSSPSDNTPK
Ga0170824_10511826423300031231Forest SoilVALTSAREKMEFEITPFFPYLTRLSTGGTEKVALTTTSPSQTEQK
Ga0302307_1065024813300031233PalsaVALASAHEKMEFEITPFFPYLTRLSAGGDKVALTTSPPQSQNTPK
Ga0265339_1034709323300031249RhizosphereKPVALTSAREKMEFEITPFFPYLTRVSNGGTEKVALTTASPSQTEQK
Ga0307476_1003188553300031715Hardwood Forest SoilKLEFEITPFFPYLTRFSSGVSEKMALTTQSPSENTQK
Ga0307478_1175174713300031823Hardwood Forest SoilEKMEFEITPFFPYLTRLSTGGTEKVALTTTSPSQSEQK
Ga0316049_11580913300031866SoilKMEFEITPVFPYLTRLSAGGEKVALTTSAPSATPQAPTPEQK
Ga0307479_1129572013300031962Hardwood Forest SoilHEKMESEITPFFPYLTRLSTVGSDRVALTTTSQSETEQK
Ga0307471_10089724613300032180Hardwood Forest SoilEKMEFEITPFFPYLTRLSTGGTEKVALTTTSPSQTEQK
Ga0348332_1168397113300032515Plant LitterAREKMEFEITPFFPYLTRLSAGGAEKVALTTASPSQQK
Ga0335082_1051976013300032782SoilPVALVSAREKMEFEITPFFPHLTRMSTGGAEKMATNTSPVAGTNPK
Ga0335072_1153505723300032898SoilMGFEITPFFPHLTRLGNGAEKVALSTTSTPSTTSDPK
Ga0335083_1119424223300032954SoilLTSEKEKIEFEVTPFFPHLTRLNNGAEKVALSTNAPAPSTTNEPK
Ga0334790_207122_423_5603300033887SoilVALASAREKMEFEITPFFPYLTRLSTGGTDKVALTTSSPSQTEQK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.