Metagenome / Metatranscriptome Family F100673

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100673
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAQDGISHPRRANLLFLTLTGLITVGILAVLFLEFQQLVTS
Number of Associated Samples	53
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.57 %
% of genes near scaffold ends (potentially truncated)	22.55 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.765 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (52.941 % of family members)
Environment Ontology (ENVO)	Unclassified (63.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.373 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 63.73% β-sheet: 0.00% Coil/Unstructured: 36.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01694	Rhomboid	5.88
PF07486	Hydrolase_2	2.94
PF05974	DUF892	1.96
PF07589	PEP-CTERM	1.96
PF14534	DUF4440	1.96
PF05960	DUF885	1.96
PF01624	MutS_I	0.98
PF00561	Abhydrolase_1	0.98
PF07690	MFS_1	0.98
PF07883	Cupin_2	0.98
PF05345	He_PIG	0.98
PF01625	PMSR	0.98
PF11306	DUF3108	0.98
PF06172	Cupin_5	0.98
PF04679	DNA_ligase_A_C	0.98
PF01833	TIG	0.98
PF00005	ABC_tran	0.98
PF03301	Trp_dioxygenase	0.98
PF08439	Peptidase_M3_N	0.98
PF03459	TOBE	0.98
PF02540	NAD_synthase	0.98
PF13545	HTH_Crp_2	0.98
PF13439	Glyco_transf_4	0.98
PF00583	Acetyltransf_1	0.98
PF10459	Peptidase_S46	0.98
PF00398	RrnaAD	0.98
PF00550	PP-binding	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	5.88
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	2.94
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.96
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.96
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.98
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.98
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.98
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.98
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.98
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	0.98
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
All Organisms	root	All Organisms	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
cellular organisms	root	All Organisms → cellular organisms	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.98 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.98 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.96 %
Allosphingosinicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella	0.98 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	1.96 %
Allosphingosinicella indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	0.98 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10900434	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005332\|Ga0066388_108028255	Not Available	528	Open in IMG/M
3300005355\|Ga0070671_100866839	Not Available	788	Open in IMG/M
3300005363\|Ga0008090_14262740	Not Available	660	Open in IMG/M
3300005542\|Ga0070732_10562899	Not Available	692	Open in IMG/M
3300005764\|Ga0066903_100240355	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300005764\|Ga0066903_100341574	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300005764\|Ga0066903_100655060	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300005764\|Ga0066903_101879239	Not Available	1146	Open in IMG/M
3300005764\|Ga0066903_105640982	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_108573924	Not Available	521	Open in IMG/M
3300006059\|Ga0075017_101227555	Not Available	587	Open in IMG/M
3300006804\|Ga0079221_11727620	Not Available	511	Open in IMG/M
3300009792\|Ga0126374_10810071	Not Available	716	Open in IMG/M
3300010043\|Ga0126380_10976265	Not Available	711	Open in IMG/M
3300010046\|Ga0126384_10218224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	1521	Open in IMG/M
3300010046\|Ga0126384_10285903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1349	Open in IMG/M
3300010046\|Ga0126384_10578733	Not Available	980	Open in IMG/M
3300010046\|Ga0126384_12081399	Not Available	544	Open in IMG/M
3300010047\|Ga0126382_10523414	Not Available	959	Open in IMG/M
3300010048\|Ga0126373_10008366	All Organisms → cellular organisms → Bacteria → Proteobacteria	8218	Open in IMG/M
3300010048\|Ga0126373_10134824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2328	Open in IMG/M
3300010048\|Ga0126373_10244520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1763	Open in IMG/M
3300010048\|Ga0126373_10433910	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300010048\|Ga0126373_10820545	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300010048\|Ga0126373_10976303	Not Available	912	Open in IMG/M
3300010048\|Ga0126373_11036355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	886	Open in IMG/M
3300010048\|Ga0126373_11167540	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300010048\|Ga0126373_11231472	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010048\|Ga0126373_11716163	Not Available	692	Open in IMG/M
3300010048\|Ga0126373_12944070	Not Available	531	Open in IMG/M
3300010358\|Ga0126370_12307939	Not Available	532	Open in IMG/M
3300010359\|Ga0126376_10217404	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300010359\|Ga0126376_12599564	Not Available	555	Open in IMG/M
3300010360\|Ga0126372_11992163	Not Available	627	Open in IMG/M
3300010360\|Ga0126372_12074584	Not Available	616	Open in IMG/M
3300010361\|Ga0126378_11043116	Not Available	920	Open in IMG/M
3300010361\|Ga0126378_11612564	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010361\|Ga0126378_11685173	Not Available	720	Open in IMG/M
3300010361\|Ga0126378_11690841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	719	Open in IMG/M
3300010366\|Ga0126379_10233271	Not Available	1798	Open in IMG/M
3300010366\|Ga0126379_10752870	Not Available	1071	Open in IMG/M
3300010366\|Ga0126379_11224965	Not Available	857	Open in IMG/M
3300010366\|Ga0126379_11522004	Not Available	775	Open in IMG/M
3300010376\|Ga0126381_100006037	All Organisms → cellular organisms → Bacteria → Proteobacteria	13377	Open in IMG/M
3300010376\|Ga0126381_100202191	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300010376\|Ga0126381_100301237	Not Available	2195	Open in IMG/M
3300010376\|Ga0126381_100392127	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300010376\|Ga0126381_100878470	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300010376\|Ga0126381_101509857	Not Available	971	Open in IMG/M
3300010376\|Ga0126381_102815502	Not Available	694	Open in IMG/M
3300010398\|Ga0126383_10798678	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300010398\|Ga0126383_11213637	Not Available	844	Open in IMG/M
3300010398\|Ga0126383_11705100	Not Available	719	Open in IMG/M
3300010398\|Ga0126383_11723498	Not Available	715	Open in IMG/M
3300012948\|Ga0126375_10294306	Not Available	1124	Open in IMG/M
3300012971\|Ga0126369_13714182	Not Available	500	Open in IMG/M
3300015371\|Ga0132258_10366095	Not Available	3571	Open in IMG/M
3300015372\|Ga0132256_101040101	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300015374\|Ga0132255_105188336	Not Available	551	Open in IMG/M
3300016270\|Ga0182036_10644006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	853	Open in IMG/M
3300016371\|Ga0182034_12041698	Not Available	506	Open in IMG/M
3300016422\|Ga0182039_10087489	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300016422\|Ga0182039_10247874	Not Available	1449	Open in IMG/M
3300017927\|Ga0187824_10223401	Not Available	647	Open in IMG/M
3300017937\|Ga0187809_10103005	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300017947\|Ga0187785_10039819	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300017947\|Ga0187785_10075093	Not Available	1311	Open in IMG/M
3300017959\|Ga0187779_10250411	Not Available	1121	Open in IMG/M
3300018060\|Ga0187765_10746170	Not Available	647	Open in IMG/M
3300021560\|Ga0126371_10053960	All Organisms → cellular organisms → Bacteria	3854	Open in IMG/M
3300021560\|Ga0126371_10231964	All Organisms → cellular organisms → Bacteria → Proteobacteria	1954	Open in IMG/M
3300021560\|Ga0126371_10268329	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300021560\|Ga0126371_10413711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1491	Open in IMG/M
3300021560\|Ga0126371_10609050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1241	Open in IMG/M
3300021560\|Ga0126371_10810952	Not Available	1082	Open in IMG/M
3300021560\|Ga0126371_11393528	Not Available	832	Open in IMG/M
3300021560\|Ga0126371_11450249	Not Available	816	Open in IMG/M
3300021560\|Ga0126371_11509141	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300021560\|Ga0126371_11625766	Not Available	772	Open in IMG/M
3300027842\|Ga0209580_10383249	Not Available	701	Open in IMG/M
3300027874\|Ga0209465_10097221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1442	Open in IMG/M
3300030730\|Ga0307482_1276697	Not Available	534	Open in IMG/M
3300031545\|Ga0318541_10540593	Not Available	652	Open in IMG/M
3300031561\|Ga0318528_10014792	Not Available	3627	Open in IMG/M
3300031573\|Ga0310915_10466221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	898	Open in IMG/M
3300031640\|Ga0318555_10546014	Not Available	628	Open in IMG/M
3300031744\|Ga0306918_10764314	Not Available	755	Open in IMG/M
3300031765\|Ga0318554_10650239	Not Available	593	Open in IMG/M
3300031770\|Ga0318521_10664728	Not Available	632	Open in IMG/M
3300031781\|Ga0318547_10626103	Not Available	668	Open in IMG/M
3300031890\|Ga0306925_10161107	Not Available	2416	Open in IMG/M
3300031897\|Ga0318520_10501923	Not Available	749	Open in IMG/M
3300031910\|Ga0306923_10006371	All Organisms → cellular organisms → Bacteria	11627	Open in IMG/M
3300031910\|Ga0306923_11610116	Not Available	675	Open in IMG/M
3300031912\|Ga0306921_10710523	Not Available	1154	Open in IMG/M
3300031912\|Ga0306921_11188086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	850	Open in IMG/M
3300031912\|Ga0306921_12324335	Not Available	561	Open in IMG/M
3300031945\|Ga0310913_10959665	Not Available	600	Open in IMG/M
3300032076\|Ga0306924_10297230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1853	Open in IMG/M
3300032783\|Ga0335079_11554334	Not Available	652	Open in IMG/M
3300033158\|Ga0335077_10136416	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.14%
Plants	Host-Associated → Plants	3.92%
Aquatic	Environmental → Aquatic	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.43%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	52.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_109004341	3300004633	Tropical Forest Soil	MGITTMALALMVLTVVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTTVGILTVLLLEFQQIITS*
Ga0066388_1080282551	3300005332	Tropical Forest Soil	MGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAKHGILQARTARLLFLTLAGLTTAGILVVLFLELLQLVTS*
Ga0070671_1008668391	3300005355	Switchgrass Rhizosphere	MEITAVVVALMVLTSVAGCLLWTLLSHFEEFYPVAKDRASYARRAGLLFRALTGLTTAGILVVLLLELQQLISSPL*
Ga0008090_142627402	3300005363	Tropical Rainforest Soil	FGCPRKSVNVGNAVAKEDAMGMTLALGLIVLTVVAGCLLWTLLFHFEEFYPAARDGISHPRRARLFFLTLTGLTTVGILVLLFLEFQQLVTS*
Ga0070732_105628992	3300005542	Surface Soil	MGITAMALGLMGLTLVAGCLLWILQLRFEEFYPAAKDGILNPRSAGLLFRALAGVTTLGILAVLALEFQQLATP*
Ga0066903_1002403555	3300005764	Tropical Forest Soil	MTLVLGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLTTVGILALLFLEFQQLVTS*
Ga0066903_1003415742	3300005764	Tropical Forest Soil	MGITTMVLALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVPHARRAGLLFRTFTGLITVGILAVLLLEFQQLVTS*
Ga0066903_1006550604	3300005764	Tropical Forest Soil	MGITTMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTTVGILTVLLLEFQQIITS*
Ga0066903_1018792392	3300005764	Tropical Forest Soil	MGISAMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTAVGILTVLLLEFQQIITS*
Ga0066903_1056409822	3300005764	Tropical Forest Soil	MGMTLALGLIVLTLVAGCFLWTLLFHFEEFYPAATNGILHPRRARMLFLTLTGLTTVGILAVLLLELQQLLTS*
Ga0066903_1085739241	3300005764	Tropical Forest Soil	MEIAAVVVALIVLTSVAGCLLWTLLRHFEEFYPVAKDRVAHARRAGLLFRALTGLTTAGILVVLLLEF
Ga0075017_1012275552	3300006059	Watersheds	MGITAMALALLVLTLVAGCLQWSLLFYSEELYPAAEGGFSHPLRVRLFFRTLTGLTTVGVLAVLLLEFRLVTS*
Ga0079221_117276202	3300006804	Agricultural Soil	MEITAVVVALMVLTSVAGCLLWTLLSHFEEFYPVAKDRASYARRAGLLFRALTGLTTAGILVVLLL
Ga0126374_108100711	3300009792	Tropical Forest Soil	AMGMTLALGLIVLTLVAGCFLWSLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLTTVGILALLFLEFQQLVTS*
Ga0126380_109762652	3300010043	Tropical Forest Soil	MGMTLALGLIVLTLVAGCFLWSLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLITVGILALLFLEFQQLVT
Ga0126384_102182241	3300010046	Tropical Forest Soil	MTAMALGLIVLTLVAGCLLWTLLFHFEQFYPAAKDGISHPRRANLLFLTFTGLITVGILAVLFLELQQLVTS*
Ga0126384_102859032	3300010046	Tropical Forest Soil	MGMTLVLGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLTTVGILALLFLEFQQLVTS*
Ga0126384_105787332	3300010046	Tropical Forest Soil	MGITAMALALMVLTLVAGCLLWTLLCHMEEFYPVPKDRISHARRAGLLFRTLTGLATVGILAVLLLEFQQLITS*
Ga0126384_120813991	3300010046	Tropical Forest Soil	MGITTMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTTVGILAVLLLEFQQIITS*
Ga0126382_105234142	3300010047	Tropical Forest Soil	MGITAMALALMVLTLVAGCLLWILVFHFEEFYPVAKDRVSNARRAGLLFRTFTGLTTVGILTVLLLAFQQLVTS*
Ga0126373_100083662	3300010048	Tropical Forest Soil	VLTILTDPSKSAGTEKEDVMGITAVALALIVMTFVAGCLLWTLMFHFEEFYPTAKDGFSHPRRAKLLFLTLTGLMTFGIVAVLFLEFQQLVTS*
Ga0126373_101348242	3300010048	Tropical Forest Soil	MSMTAAALALIVLTLVAGCLLWTLLFHFEDFYPAAKDEISSPRTAGMLFLTLTGLTTLGILAVLLLELQQLVT*
Ga0126373_102445202	3300010048	Tropical Forest Soil	LRYEKEGTMGITAMAVALMVSTLVAGCLLWTLLFHFEELYPVAKDRVSHARRAGLLFRTLTGLSTVGILVVLFLAVQLLVTS*
Ga0126373_104339101	3300010048	Tropical Forest Soil	RKGGAMRIAAAMAVGLMVLTLVAGCVLWTFLFHFEEFYPVAKDRVSQARRAALLFRTLTGLATVGILAVLLMEFQLLVTS*
Ga0126373_108205452	3300010048	Tropical Forest Soil	MTLGLIFLTLMAGCLLWTLLFHFEEFYPTAKDGFSHPRRAKLLFLTFTGLITAGILAVLFLNFQQLIAS*
Ga0126373_109763032	3300010048	Tropical Forest Soil	MGIAAAMVLALMILTLVAGCLLWTLLCHMEEFYPVPKDRISHARRAGLLFRTLTGLTTIGIVAVLLLEFRQLVTS*
Ga0126373_110363552	3300010048	Tropical Forest Soil	MGMTLALGLIVLTVVAGCLLWTLLFHFEEFYPAAKEGISHPRRVRLLFLTLTGLTTVGILALLFLEFQQLVTS*
Ga0126373_111675401	3300010048	Tropical Forest Soil	MGITALALALMVLTLVAGCLLWTLVSHFEEFYPVAKERVSHARRAGLVFRTFTGLTTVGILTVLLLEFQQLVTW*
Ga0126373_112314722	3300010048	Tropical Forest Soil	TLVAGCLLWTLLFHFEEFYPVAQDGISHPRWAELLFLTLTGLITVGILVVLILEFQQLVTS*
Ga0126373_117161631	3300010048	Tropical Forest Soil	MRIAAAMAVALMVLTLVAGCVLWTFLFHFEEFYPVARERVSQARRAALLFRTLTGLATVGIVAVLLIEFQLLVTS*
Ga0126373_129440701	3300010048	Tropical Forest Soil	MGMTAMALGLIVLTLVAACLLWTLLFHFEEFYPAAQDGISHPRRANLLFLTLTGLITVGILAVLFLEFQQLVTS*
Ga0126370_123079391	3300010358	Tropical Forest Soil	KVRNVVAKEDAMGMTLALGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILQPQTARLVFLALTGITTAGILTILFLEFQQLITS*
Ga0126376_102174042	3300010359	Tropical Forest Soil	MGIAAMALALMVLTLVAGCLLWILVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTTVGILTVLLLAFQQLVTS*
Ga0126376_125995642	3300010359	Tropical Forest Soil	MGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLITVGILAVLFLEFQQLVTS*
Ga0126372_119921631	3300010360	Tropical Forest Soil	MGITAMALALMVLTLVAGCLLWILVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLITVGILTV
Ga0126372_120745841	3300010360	Tropical Forest Soil	MNLGNAVATEDAMGMTLALGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLTTAGILALLFLEFQQLVTS*
Ga0126378_110431162	3300010361	Tropical Forest Soil	MDCFTVSRRKCRSKEDDMGTTAMALGLIVLTLAAGCLLWTLMFHFEEFYPAARDGILNRRRAGLLFLTLTGLTTAGILAVLFLEFQQLITS*
Ga0126378_116125642	3300010361	Tropical Forest Soil	MGITTMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRAFTGLTTVGILTVLLLEFQQIITS*
Ga0126378_116851732	3300010361	Tropical Forest Soil	MALGLIFLTLMAGCLLWTLLFHFEEFYPTAKDGFSHPRRAKLLFLTFTGLITAGILAVLFLNFQQLIAS*
Ga0126378_116908412	3300010361	Tropical Forest Soil	MSMTAATLALIVLTLVAGCLLWTLLFHFEDFCPAAKDEISSPRTAGMLFLTLTGLTTLGILAVLLLEVQQLVTS*
Ga0126379_102332712	3300010366	Tropical Forest Soil	MGMTLALGLIVLTLVAGCFLWSLLFHFEEFYPAAKHGILHPQRVRLLFLTLTGLTTAAILALLFLEFQQLVTS*
Ga0126379_107528702	3300010366	Tropical Forest Soil	MGISAMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVPHARRAGLLFRTFTGLITVGILAVLLLEFQQLVTS*
Ga0126379_112249652	3300010366	Tropical Forest Soil	MRRACREGQKCPSLSNIELSHFSTLRMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAKDGISHPRRANLLFLTLTGLITVGILAVLFLELQQLVTS*
Ga0126379_115220041	3300010366	Tropical Forest Soil	MALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTLTGLATVGILAVLLLEFQQLITS*
Ga0126381_10000603712	3300010376	Tropical Forest Soil	MSMTAATLALIVLTLVAGCLLWTLLFHFEDFYPAAKDEISSPRTAGMLFLTLTGLTTLGILAVLLLELQQLVTS*
Ga0126381_1002021914	3300010376	Tropical Forest Soil	MRIAAAMAVALMVLTLVAGCVLWTFLFHFEEFYPVSKEPVSHARRAALLFRTLAGLATVGIVAALLIEFQLLVTS*
Ga0126381_1003012372	3300010376	Tropical Forest Soil	MRRACREGQKCPSLSDIELLHFSTMGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPVAQDGISHPRWAELLFLTLTGLITVGILVVLILEFQQLVTS*
Ga0126381_1003921273	3300010376	Tropical Forest Soil	MGIKAMALALMILALVAGCLQWSLLFHLEEFYPVAADGFSHARRVGLVFRTLTGLTTVGILAVLLLELQQLLTS*
Ga0126381_1008784701	3300010376	Tropical Forest Soil	KDAMGMTLVLGLIVLTVVAGCFLWTLLFHFEEFYPATKGGMLHPRRAKLLFLTLTGLTTVGIIALLVLELQQLVTS*
Ga0126381_1015098572	3300010376	Tropical Forest Soil	MGLTAMAVALMVLTLVAACFLWTLLFRFEEFHPVAEDPVSHPRRVGLLFRTLTGLTTVGVFAVLLLEFYLLV
Ga0126381_1028155021	3300010376	Tropical Forest Soil	MGMTLALGLIVLTLVAGCFLWSLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLITVGILALLFLEFQQLVTS*
Ga0126383_107986782	3300010398	Tropical Forest Soil	MGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAQDGISHPRRANLLFLTLTGLITVGILAVLFLEFQQLVTS*
Ga0126383_112136371	3300010398	Tropical Forest Soil	MAVALMLLTLVAGCLLWILLFHFEEFYPVAQERVSHARRAGLLFRTLTGLTTVGILAVLLLEIQQLITSPL*
Ga0126383_117051001	3300010398	Tropical Forest Soil	MGMTLVLGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILQARTARLLFLTLAGLTTAGILVVLFLELQQLVTS*
Ga0126383_117234981	3300010398	Tropical Forest Soil	MGIAAMALALMVLTLVAGCLLWILVFHFEEFYPVAKDRVPHARRAGLLFRTFTGLTTVGILTVLLLEFQQLVTS*
Ga0126375_102943062	3300012948	Tropical Forest Soil	MGIAAMALALMVLTLVAGCLLWILVFHFEEFYPVAKERVSHARRAGQLFRTFTGLTTVGILTVLLLAFQQIVTS*
Ga0126369_137141821	3300012971	Tropical Forest Soil	MVLTCVAGCLLWTLLFRFEEFYPVAKDRASHARRAGLLFRTLTGVTTVGIIAILLLEFQQLVTW*
Ga0132258_103660954	3300015371	Arabidopsis Rhizosphere	MGMTAVALGLIVLTLVAGCLLWTLLFHFEEFYPVAKNGILHSGRARLLFLTLTGLTTVGILAVILLEFQQLLIS*
Ga0132256_1010401011	3300015372	Arabidopsis Rhizosphere	MGMTAVALGLIVLTLVAGCLLWTLLFHFEEFYPVAKNGILHSGRARLLFLTLTGLTTVGILAVLLLELQQLVTSPL*
Ga0132255_1051883361	3300015374	Arabidopsis Rhizosphere	MTAVALGLIVLTLVAGCLLWTLLFHFEEFYPVAKNGILHSGRARLLFLTLTGLTTVGILAVILLEFQQLLIS*
Ga0182036_106440062	3300016270	Soil	MGMTAGALALIVVTLVAGCLLWALLYHVEEFCPAAKDEISNPRRAGLLFLALTGLTTVGILAVLFLEFQQLVTP
Ga0182034_120416981	3300016371	Soil	MTLALGLIVLTVVAGCFLWTLLFHFEEFYPAAQDGILHLRRARLLFLTLTGLTTVGILAVLLLELH
Ga0182039_100874893	3300016422	Soil	MGMTTVALGLIVLTLVAGCLLWTLLFHFEDFYPMAKDGISHPQRAKLLFLTLTGLMTVGIVAVLFLEFQQLVTS
Ga0182039_102478743	3300016422	Soil	MGMTAIALGLVVLTLAAGCLLWTLQLHFEEFYPVTSEGIPNPRRARLLFLTLTGLTTVGIIAVLLLEFQQLVISQAL
Ga0187824_102234011	3300017927	Freshwater Sediment	MEITAVVVALMVLTSVAGCLLWTLLSHFEEFYPVANDRASHARRAGLLFRALTGLTTAGILVVLLLELQQLISAPL
Ga0187809_101030052	3300017937	Freshwater Sediment	MGTTAMALGLIVLTLAAGCLLWTLLLHFEEIYPAARKARVLFLALTGVTTVGILAVLLLEVRQLVSS
Ga0187785_100398191	3300017947	Tropical Peatland	MEIAAVVVALIVLTLVAGCLLWTLLWHFEEFYPVAKDRVWYARRAGLLFRALTGLTTVGILVVLLLEFQQLLTARF
Ga0187785_100750932	3300017947	Tropical Peatland	MEMTLALGLIVLTVVAGCFLWTLLFHFEEFYPAANHGILHPQTAKLVFLTLTGITTAGILTILFLEFQQLVIS
Ga0187779_102504112	3300017959	Tropical Peatland	MGITAMALALIILTLVAGCLLWTLLFHYEEFYAAAKNGISHPRRARLLFLTLTGLTTIGILAVLLLEVQQLVTS
Ga0187765_107461702	3300018060	Tropical Peatland	VLTLMAGCFLWTLLFHFEEFYPAAKDGILHPRRARLLFLTLTGLTTVGILAVLFLELQQLVAS
Ga0126371_100539602	3300021560	Tropical Forest Soil	MTLVLGLIVLTVVAGCFLWTLLFHFEEFYPATKGGMLHPRRAKLLFLTLTGLTTVGIIALLVLELQQLVTS
Ga0126371_102319644	3300021560	Tropical Forest Soil	MAITSVAAALMVLTLVAGYLLWTLMFHFEEFYPVAKDRVSHARRAGLLFRILTGLATVGILAVLLLEFQQLVTS
Ga0126371_102683292	3300021560	Tropical Forest Soil	MGISAMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVPHARRAGLLFRTFTGLITVGILAVLLLEFQQLVTS
Ga0126371_104137111	3300021560	Tropical Forest Soil	EDVMGITSMALGLIFLTLMAGCLLWTLLFHFEEFYPTAKDGFSHPRRAKLLFLTLTGVITAGILAVLFLNFQQLIAS
Ga0126371_106090502	3300021560	Tropical Forest Soil	MGITAMAVALMVSTLVAGCLLWTLLFHFEELYPVAKDRVSHARRAGLLFRTLTGLSTVGILVVLFLAVQLLVTS
Ga0126371_108109522	3300021560	Tropical Forest Soil	MGITTMALALMVLTLVAGCLLWTLVFHFEEFYPVAKDRVSHARRAGLLFRTFTGLTTVGILTVLLLEFQQIITS
Ga0126371_113935282	3300021560	Tropical Forest Soil	MSMTAAALALIVLTLVAGCLLWTLLFHFEDFCPAAKDEISSPRTAGMLFLTLTGLTTLGILAVLLLELQQLVTS
Ga0126371_114502491	3300021560	Tropical Forest Soil	MGMTLALGLIVLTVVAGCFLWSLLFHFEEFYPAARDGILHPRRARLLFLTLTGLTTVGILTVLFLEFQQLVTS
Ga0126371_115091411	3300021560	Tropical Forest Soil	MGITAIAVALMVSTLVAGCLLWTLMFHFEELYPVAKDRARRAGLLFRTFTVLTAVGILAVLLLEFQELVTS
Ga0126371_116257661	3300021560	Tropical Forest Soil	MALGLIVLTLVAGCLLWTLLFHFEEFYPAAQDGISHARRANLLFLTLTGLITVGILAVLFLEFQQLVTS
Ga0209580_103832491	3300027842	Surface Soil	MGITAMALGLMGLTLVAGCLLWILQLRFEEFYPAAKDGILNPRSAGLLFRALAGVTTLGILAVLALEFQQLATP
Ga0209465_100972211	3300027874	Tropical Forest Soil	TLKDAMGMTLVLGLIVLTVVAGCFLWTLLFHFEEFYPAAKHGILHPRRARLLFLTLTGLTTVGILALLFLEFQQLVTS
Ga0307482_12766971	3300030730	Hardwood Forest Soil	DAMGITAMALGLMGLTLVAGCLLWILQLRFEEFYPAAKDGILNPRSAGLLFRALAGVTTLGILAVLALEFQQLATP
Ga0318541_105405931	3300031545	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISHSRRVNLLFLTLTGLITVGILAILFLEFQQLVTS
Ga0318528_100147922	3300031561	Soil	MGMTAIALGLVVLTLAAGCLLWTLQFHFEEFYPVTSEGIPNPRRARLLFLTLTGLTTVGIIAVLLLEFQQLVISQAL
Ga0310915_104662211	3300031573	Soil	MGMSAAALALIVVTLVAGCLLWALLYHVEEFCPAAKDEISNPRRAGLLFLALTGLTTVGILAVLLLELH
Ga0318555_105460141	3300031640	Soil	MGMTAIALGLVVLTLAAGCLLWTLQFHFEEFYPVTREGISNPRRARLLFLTLTGLTTVGIIAVLLLEFQQLVISQAL
Ga0306918_107643141	3300031744	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISHSRRVNLLFLTLTGLITVG
Ga0318554_106502391	3300031765	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLLFHFEEFYPAAQDGISHPRRANLLFLTLTGLITAGILAVLFLEFQQLVTS
Ga0318521_106647282	3300031770	Soil	QLHRSRADTLKDAMGMTLALGLIVLTVVAGCFLWTLLFHFEEFYPAAQDGILHLRRARLLFLTLTGLTTVGILAVLLLELH
Ga0318547_106261032	3300031781	Soil	MRRACREGQKCPSLSNIELSHFSTMGMTTVALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISHPRRARLLFVAFTGLTTIGILAELFLEFQQLVTS
Ga0306925_101611072	3300031890	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISHSRRVNLLFLTLTGLITVGILAILFLEFQQLVSS
Ga0318520_105019231	3300031897	Soil	MGMTAIALGLVVLTLAAGCLLWTLQFHFEEFYPVTREGISNPRRARLVFLTLTGLTTVGIIAVLLLEFQQLVISQAL
Ga0306923_100063711	3300031910	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISQSRRVNLLFLTLTGLITVG
Ga0306923_116101162	3300031910	Soil	MGMTAAALALIVLTLVAGGLLWTLLYHFEDFYPAAKDEIAYPRRAGLLFLTLTGLTTVGILAVLLLELQQLGTW
Ga0306921_107105231	3300031912	Soil	MALPFYIELSHFSTMGMTAMALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISQSRRVNLLFLTLTGLITVGILAILFLEFQQLVTS
Ga0306921_111880862	3300031912	Soil	MSVTAMALALVALTLVAGCLLWTLSFHFEEFYPDTKDGASHARRAGLLFRAVTGLTAVAILAVLLLEFQQLITW
Ga0306921_123243352	3300031912	Soil	MGMTTVALGLIVLTLVAGCLLWTLLLHFEEFYPTAKDGISHPRRANLLFLTLTGLITVGILALLFLEFQQVGTS
Ga0310913_109596651	3300031945	Soil	MGMTLALGLIVMILVAACFLWTLLFHFEEFYPAANDGISHLRRARLLFITVTGLTTVGILAVLFLELQQLVTS
Ga0306924_102972302	3300032076	Soil	MGMTTVALGLIVLTLVAGCLLWTLQFHFEEFYPAAKDGISHSRRVNLLFLTLTGLITVGILAILFLEFQQLVTS
Ga0335079_115543341	3300032783	Soil	LTLVAGCLLWTLLSHFEEFYPVAKDRVSYARRAGVLFRALTGLTTAGILVVLILELQQLISSPL
Ga0335077_101364162	3300033158	Soil	MEITAVVVALMVLTLVAGCLLWTLLSHFEEFYPVAKDRVSYARRAGVLFRALTGLTTAGILVVLILELQQLISSPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100673

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences