Basic Information | |
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Family ID | F100669 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 58 residues |
Representative Sequence | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTTQNRFR |
Number of Associated Samples | 60 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 85.29 % |
% of genes from short scaffolds (< 2000 bps) | 66.67 % |
Associated GOLD sequencing projects | 55 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (57.843 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (51.961 % of family members) |
Environment Ontology (ENVO) | Unclassified (84.314 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (86.275 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 63.53% β-sheet: 0.00% Coil/Unstructured: 36.47% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
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Pfam ID | Name | % Frequency in 102 Family Scaffolds |
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PF06725 | 3D | 13.73 |
PF14090 | HTH_39 | 7.84 |
PF02195 | ParBc | 4.90 |
PF00145 | DNA_methylase | 2.94 |
PF05876 | GpA_ATPase | 1.96 |
PF05014 | Nuc_deoxyrib_tr | 0.98 |
PF12850 | Metallophos_2 | 0.98 |
PF00535 | Glycos_transf_2 | 0.98 |
COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
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COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 2.94 |
COG5525 | Phage terminase, large subunit GpA | Mobilome: prophages, transposons [X] | 1.96 |
COG3613 | Nucleoside 2-deoxyribosyltransferase | Nucleotide transport and metabolism [F] | 0.98 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 57.84 % |
All Organisms | root | All Organisms | 42.16 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000736|JGI12547J11936_1000276 | Not Available | 13154 | Open in IMG/M |
3300003277|JGI25908J49247_10116254 | Not Available | 636 | Open in IMG/M |
3300003393|JGI25909J50240_1020712 | All Organisms → Viruses → Predicted Viral | 1513 | Open in IMG/M |
3300003393|JGI25909J50240_1068073 | Not Available | 722 | Open in IMG/M |
3300003490|JGI25926J51410_1010060 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1960 | Open in IMG/M |
3300003491|JGI25924J51412_1000451 | All Organisms → cellular organisms → Bacteria | 6628 | Open in IMG/M |
3300006805|Ga0075464_10012800 | Not Available | 4178 | Open in IMG/M |
3300009152|Ga0114980_10632477 | Not Available | 603 | Open in IMG/M |
3300009155|Ga0114968_10651022 | Not Available | 554 | Open in IMG/M |
3300009158|Ga0114977_10009103 | All Organisms → cellular organisms → Bacteria | 6304 | Open in IMG/M |
3300009159|Ga0114978_10088045 | All Organisms → Viruses → Predicted Viral | 2067 | Open in IMG/M |
3300009160|Ga0114981_10001814 | Not Available | 13856 | Open in IMG/M |
3300010160|Ga0114967_10028053 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 3818 | Open in IMG/M |
3300010334|Ga0136644_10429573 | Not Available | 745 | Open in IMG/M |
3300010885|Ga0133913_10507477 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 3177 | Open in IMG/M |
3300011010|Ga0139557_1002373 | All Organisms → Viruses → Predicted Viral | 4201 | Open in IMG/M |
3300013006|Ga0164294_10031425 | All Organisms → Viruses → Predicted Viral | 4246 | Open in IMG/M |
3300017701|Ga0181364_1045112 | Not Available | 697 | Open in IMG/M |
3300017701|Ga0181364_1047190 | Not Available | 679 | Open in IMG/M |
3300017701|Ga0181364_1079276 | Not Available | 500 | Open in IMG/M |
3300017716|Ga0181350_1035842 | All Organisms → Viruses → Predicted Viral | 1354 | Open in IMG/M |
3300017722|Ga0181347_1116130 | Not Available | 752 | Open in IMG/M |
3300017722|Ga0181347_1131740 | Not Available | 693 | Open in IMG/M |
3300017723|Ga0181362_1037460 | All Organisms → Viruses → Predicted Viral | 1026 | Open in IMG/M |
3300017736|Ga0181365_1100668 | Not Available | 700 | Open in IMG/M |
3300017736|Ga0181365_1108446 | Not Available | 670 | Open in IMG/M |
3300017736|Ga0181365_1126927 | Not Available | 610 | Open in IMG/M |
3300017761|Ga0181356_1171419 | Not Available | 660 | Open in IMG/M |
3300017761|Ga0181356_1199936 | Not Available | 592 | Open in IMG/M |
3300017761|Ga0181356_1204757 | Not Available | 582 | Open in IMG/M |
3300017774|Ga0181358_1096043 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1067 | Open in IMG/M |
3300017774|Ga0181358_1189914 | Not Available | 678 | Open in IMG/M |
3300017774|Ga0181358_1212055 | Not Available | 628 | Open in IMG/M |
3300017774|Ga0181358_1229486 | Not Available | 593 | Open in IMG/M |
3300017774|Ga0181358_1251553 | Not Available | 556 | Open in IMG/M |
3300017777|Ga0181357_1199781 | Not Available | 714 | Open in IMG/M |
3300017777|Ga0181357_1222130 | Not Available | 666 | Open in IMG/M |
3300017778|Ga0181349_1199424 | Not Available | 692 | Open in IMG/M |
3300017778|Ga0181349_1201158 | Not Available | 688 | Open in IMG/M |
3300017778|Ga0181349_1232914 | Not Available | 622 | Open in IMG/M |
3300017778|Ga0181349_1246601 | Not Available | 598 | Open in IMG/M |
3300017784|Ga0181348_1296673 | Not Available | 543 | Open in IMG/M |
3300017785|Ga0181355_1091771 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1262 | Open in IMG/M |
3300017785|Ga0181355_1131307 | All Organisms → Viruses → Predicted Viral | 1020 | Open in IMG/M |
3300017785|Ga0181355_1236296 | Not Available | 705 | Open in IMG/M |
3300017785|Ga0181355_1248860 | Not Available | 682 | Open in IMG/M |
3300017785|Ga0181355_1274207 | Not Available | 641 | Open in IMG/M |
3300018815|Ga0187845_1021220 | All Organisms → cellular organisms → Bacteria | 2461 | Open in IMG/M |
3300019784|Ga0181359_1000028 | All Organisms → cellular organisms → Bacteria | 28461 | Open in IMG/M |
3300019784|Ga0181359_1179540 | Not Available | 700 | Open in IMG/M |
3300019784|Ga0181359_1179913 | Not Available | 699 | Open in IMG/M |
3300019784|Ga0181359_1238213 | Not Available | 560 | Open in IMG/M |
3300021963|Ga0222712_10098423 | All Organisms → Viruses → Predicted Viral | 2052 | Open in IMG/M |
3300022190|Ga0181354_1000617 | All Organisms → cellular organisms → Bacteria | 6548 | Open in IMG/M |
3300022190|Ga0181354_1085795 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1035 | Open in IMG/M |
3300022190|Ga0181354_1121594 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 838 | Open in IMG/M |
3300022190|Ga0181354_1135777 | Not Available | 780 | Open in IMG/M |
3300022190|Ga0181354_1178324 | Not Available | 647 | Open in IMG/M |
3300022407|Ga0181351_1052414 | All Organisms → Viruses → Predicted Viral | 1699 | Open in IMG/M |
3300022407|Ga0181351_1076814 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1339 | Open in IMG/M |
3300022407|Ga0181351_1114463 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1021 | Open in IMG/M |
3300022407|Ga0181351_1183133 | Not Available | 718 | Open in IMG/M |
3300022752|Ga0214917_10002440 | All Organisms → cellular organisms → Bacteria | 22567 | Open in IMG/M |
3300022752|Ga0214917_10012920 | All Organisms → cellular organisms → Bacteria | 7516 | Open in IMG/M |
3300022752|Ga0214917_10043048 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 3166 | Open in IMG/M |
3300022752|Ga0214917_10313494 | Not Available | 690 | Open in IMG/M |
3300023174|Ga0214921_10001655 | Not Available | 37446 | Open in IMG/M |
3300023174|Ga0214921_10001813 | Not Available | 35724 | Open in IMG/M |
3300023179|Ga0214923_10041580 | All Organisms → cellular organisms → Bacteria | 3642 | Open in IMG/M |
3300023184|Ga0214919_10021261 | All Organisms → cellular organisms → Bacteria | 7233 | Open in IMG/M |
3300023184|Ga0214919_10024942 | All Organisms → cellular organisms → Bacteria | 6472 | Open in IMG/M |
3300025896|Ga0208916_10000965 | All Organisms → cellular organisms → Bacteria | 12636 | Open in IMG/M |
3300025896|Ga0208916_10379806 | Not Available | 617 | Open in IMG/M |
3300027581|Ga0209651_1000144 | Not Available | 25061 | Open in IMG/M |
3300027581|Ga0209651_1165700 | Not Available | 592 | Open in IMG/M |
3300027608|Ga0208974_1002678 | Not Available | 6580 | Open in IMG/M |
3300027656|Ga0209357_1001649 | Not Available | 9082 | Open in IMG/M |
3300027656|Ga0209357_1071605 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1033 | Open in IMG/M |
3300027659|Ga0208975_1002651 | Not Available | 7026 | Open in IMG/M |
3300027720|Ga0209617_10000694 | Not Available | 15265 | Open in IMG/M |
3300027733|Ga0209297_1166064 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 897 | Open in IMG/M |
3300027734|Ga0209087_1006613 | All Organisms → cellular organisms → Bacteria | 6152 | Open in IMG/M |
3300027736|Ga0209190_1172708 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 915 | Open in IMG/M |
3300027754|Ga0209596_1285840 | Not Available | 661 | Open in IMG/M |
3300027759|Ga0209296_1111003 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1292 | Open in IMG/M |
3300027763|Ga0209088_10131011 | All Organisms → Viruses → Predicted Viral | 1123 | Open in IMG/M |
3300027785|Ga0209246_10091576 | All Organisms → Viruses → Predicted Viral | 1188 | Open in IMG/M |
(restricted) 3300027970|Ga0247837_1247514 | Not Available | 703 | Open in IMG/M |
3300027971|Ga0209401_1020522 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 3373 | Open in IMG/M |
3300027973|Ga0209298_10000459 | All Organisms → cellular organisms → Bacteria | 27025 | Open in IMG/M |
3300027973|Ga0209298_10385018 | Not Available | 529 | Open in IMG/M |
(restricted) 3300028553|Ga0247839_1121341 | Not Available | 1195 | Open in IMG/M |
3300032018|Ga0315272_10136013 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 1152 | Open in IMG/M |
3300032053|Ga0315284_11727135 | Not Available | 650 | Open in IMG/M |
3300032092|Ga0315905_10001705 | Not Available | 23441 | Open in IMG/M |
3300032092|Ga0315905_10177300 | All Organisms → Viruses → Predicted Viral | 2110 | Open in IMG/M |
3300032092|Ga0315905_10917005 | Not Available | 747 | Open in IMG/M |
3300032118|Ga0315277_10849978 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 854 | Open in IMG/M |
3300032156|Ga0315295_11372476 | Not Available | 686 | Open in IMG/M |
3300033233|Ga0334722_10837758 | Not Available | 650 | Open in IMG/M |
3300034061|Ga0334987_0050813 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB | 3440 | Open in IMG/M |
3300034061|Ga0334987_0574821 | Not Available | 670 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 51.96% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 16.67% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 13.73% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 4.90% |
Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 2.94% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 2.94% |
Freshwater And Sediment | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment | 1.96% |
Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 1.96% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.98% |
Freshwater | Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater | 0.98% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.98% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000736 | Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 | Environmental | Open in IMG/M |
3300003277 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD | Environmental | Open in IMG/M |
3300003393 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD | Environmental | Open in IMG/M |
3300003490 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN | Environmental | Open in IMG/M |
3300003491 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD | Environmental | Open in IMG/M |
3300006805 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA | Environmental | Open in IMG/M |
3300009152 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG | Environmental | Open in IMG/M |
3300009155 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG | Environmental | Open in IMG/M |
3300009158 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG | Environmental | Open in IMG/M |
3300009159 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG | Environmental | Open in IMG/M |
3300009160 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG | Environmental | Open in IMG/M |
3300010160 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG | Environmental | Open in IMG/M |
3300010334 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2) | Environmental | Open in IMG/M |
3300010885 | northern Canada Lakes Co-assembly | Environmental | Open in IMG/M |
3300011010 | Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice | Environmental | Open in IMG/M |
3300013006 | Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG | Environmental | Open in IMG/M |
3300017701 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N | Environmental | Open in IMG/M |
3300017716 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D | Environmental | Open in IMG/M |
3300017722 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017723 | Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N | Environmental | Open in IMG/M |
3300017736 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N | Environmental | Open in IMG/M |
3300017761 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017774 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D | Environmental | Open in IMG/M |
3300017777 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N | Environmental | Open in IMG/M |
3300017778 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D | Environmental | Open in IMG/M |
3300017784 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N | Environmental | Open in IMG/M |
3300017785 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N | Environmental | Open in IMG/M |
3300018815 | Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68 | Environmental | Open in IMG/M |
3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
3300022190 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N | Environmental | Open in IMG/M |
3300022407 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D | Environmental | Open in IMG/M |
3300022752 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB | Environmental | Open in IMG/M |
3300023174 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505 | Environmental | Open in IMG/M |
3300023179 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510 | Environmental | Open in IMG/M |
3300023184 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503 | Environmental | Open in IMG/M |
3300025896 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300027581 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes) | Environmental | Open in IMG/M |
3300027608 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027656 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes) | Environmental | Open in IMG/M |
3300027659 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027720 | Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes) | Environmental | Open in IMG/M |
3300027733 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027734 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027736 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027754 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027759 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027763 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027785 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes) | Environmental | Open in IMG/M |
3300027970 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5m | Environmental | Open in IMG/M |
3300027971 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027973 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300028553 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_16m | Environmental | Open in IMG/M |
3300032018 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle | Environmental | Open in IMG/M |
3300032053 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16 | Environmental | Open in IMG/M |
3300032092 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121 | Environmental | Open in IMG/M |
3300032118 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15 | Environmental | Open in IMG/M |
3300032156 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0 | Environmental | Open in IMG/M |
3300033233 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom | Environmental | Open in IMG/M |
3300034061 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12547J11936_10002769 | 3300000736 | Freshwater And Sediment | MTKGICDLRKFLHKAQVRLTEAGLLIIGYLRKTEARVRGINKLEDSYNAKYTQNRFRPRLFCAN* |
JGI25908J49247_101162541 | 3300003277 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNRFR |
JGI25909J50240_10207121 | 3300003393 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTTQNRFR |
JGI25909J50240_10680732 | 3300003393 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTTQNRF |
JGI25926J51410_10100601 | 3300003490 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQN |
JGI25924J51412_100045116 | 3300003491 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAK |
Ga0075464_100128001 | 3300006805 | Aqueous | MTKVICHLRKILHKAQVRLTQVGSLIIGYLRKIEAIVRGINKLGNFYFTKCTQNRFR |
Ga0114980_106324771 | 3300009152 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQVGSLIIGYLRKMVSIVRGINKLGDSYYVKSTQNRFR |
Ga0114968_106510222 | 3300009155 | Freshwater Lake | MTKGICDLRKFLQKAQVRLTQAGSLIIGYLRKIGSLVRDINKLGDSYNAKCTQNRFR |
Ga0114977_100091036 | 3300009158 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLYKIGSLVRSINNLEDSYIAKTTQNRFRPRIICGS* |
Ga0114978_100880455 | 3300009159 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRGINELGDYYNAKCTQNRFR |
Ga0114981_100018144 | 3300009160 | Freshwater Lake | MTKGISDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRSINKLGDSYDAKCTQNRFRPRLFCTN* |
Ga0114967_100280531 | 3300010160 | Freshwater Lake | MTKGICDLRKFLQKAQVRLTQAGSLIIGYLRKIGSLVRDINKLGDSYNAKCTQNRFRPQLFCAS* |
Ga0136644_104295733 | 3300010334 | Freshwater Lake | MTKGICHLRKFLHKAQVRLTQAGSLIIGYLRKIRSIVRGINKLGDSYNAKSTQNRFR |
Ga0133913_105074777 | 3300010885 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRGINELGDY |
Ga0139557_10023739 | 3300011010 | Freshwater | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIIGYLRITRRNLLWLGHLGNFYFAKS |
Ga0164294_100314253 | 3300013006 | Freshwater | MTKGTHPKGICDLRKFLQKAQVRLTQAGSLSIGHLRITRRNSLWLGHLGNFYFCKTPLNRFRGANFLCELT* |
Ga0181364_10451121 | 3300017701 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKTTQNIPLFSPLHL |
Ga0181364_10471902 | 3300017701 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNTQIGR |
Ga0181364_10792762 | 3300017701 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLCKIGSLVRGISNLGDSYIAKTTQNIFSLRSEE |
Ga0181350_10358424 | 3300017716 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGHLRKIGSLVRGVNDLGNFYFAQTPQN |
Ga0181347_11161303 | 3300017722 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAKT |
Ga0181347_11317402 | 3300017722 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGLLIIGYLRKIGSIVRGINELGNFYFAKCT |
Ga0181362_10374603 | 3300017723 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTP |
Ga0181365_11006681 | 3300017736 | Freshwater Lake | MTKVICHLRKFLHKAQVRLTQAGLLIIGYLRKIGSIVRGINELGNFYFAKCTQNIFFLL |
Ga0181365_11084461 | 3300017736 | Freshwater Lake | MTKVICDLRKILHKAQVRLTQAGSLIIGYLRITRRNLLWLGHLGNFYFAKYTQNTSPLFPPPF |
Ga0181365_11269271 | 3300017736 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTTQNTLSSSLSSS |
Ga0181356_11714192 | 3300017761 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAKTPQN |
Ga0181356_11999361 | 3300017761 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKTTQNIFPRSE |
Ga0181356_12047572 | 3300017761 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLCKIGSLVRGISNLGDSYIAKTTQNISFRSE |
Ga0181358_10960431 | 3300017774 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNI |
Ga0181358_11899141 | 3300017774 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKT |
Ga0181358_12120552 | 3300017774 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGISNLGDSYIAKTTQN |
Ga0181358_12294862 | 3300017774 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQVRLTQAGSLIIGYLRKIGSLVRGVSNLGDSYIAKTTQNTPHQIGR |
Ga0181358_12515532 | 3300017774 | Freshwater Lake | MTKGTHPKGICYLRKILHKAQVRLTQAGSLIIGYLRKIRSLVRGVNNLGNFYFAKCT |
Ga0181357_11997812 | 3300017777 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTPQ |
Ga0181357_12221301 | 3300017777 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAKTPQNIFF |
Ga0181349_11994242 | 3300017778 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGN |
Ga0181349_12011581 | 3300017778 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGN |
Ga0181349_12329142 | 3300017778 | Freshwater Lake | MTKVICDLRKILHKAQVRLTQAGSLIIGYLRITRRNLLWLGHLGNFYFAKYTQNT |
Ga0181349_12466011 | 3300017778 | Freshwater Lake | MTKGTHLKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTTQN |
Ga0181348_12966731 | 3300017784 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQMRLTQVWSLIIGYLRITRRNLLWLGHLGNFYFAQTTQNI |
Ga0181355_10917714 | 3300017785 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSIMRGINKLGDSYNAQCTQNT |
Ga0181355_11313073 | 3300017785 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGISNLGDSYIAKTTQN |
Ga0181355_12362962 | 3300017785 | Freshwater Lake | MTKVICDLRKILHKAQVRLTQAGSLIIGYLRITRRNLLWLGHLGNFYFAKYTQ |
Ga0181355_12488602 | 3300017785 | Freshwater Lake | MTKGICDLRKFLHKAQVQLTQAGSLIIGHLRKIGSIVRGINELGNFYFAKCTQNT |
Ga0181355_12742072 | 3300017785 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFA |
Ga0187845_10212205 | 3300018815 | Freshwater | MTKGICDLRKFLHKAQVRLTQAGSLSIGYLRKIGSLVRDVNNLGNFYFAKTTQNRFRRRTFCGS |
Ga0181359_100002849 | 3300019784 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNIPF |
Ga0181359_11795402 | 3300019784 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAKTPQNI |
Ga0181359_11799132 | 3300019784 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKTTQNI |
Ga0181359_12382131 | 3300019784 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQVRLTQAGSLIIGYLRKIGSLVRGVSNLGDSYIAKTTQNI |
Ga0222712_100984231 | 3300021963 | Estuarine Water | VTKGTHPKGICDLRKFLQKAQVRLTQAGSLIIGYLRKTGSLVRGVNDLGNFYFAKTPQNRFR |
Ga0181354_100061716 | 3300022190 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNILS |
Ga0181354_10857951 | 3300022190 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKTTQNIP |
Ga0181354_11215943 | 3300022190 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTTQNI |
Ga0181354_11357773 | 3300022190 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQVRLTQAGSLIIGYLRKIGSLVRGVSNLGDSYIAKTTQN |
Ga0181354_11783241 | 3300022190 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAKTTQN |
Ga0181351_10524141 | 3300022407 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTTQN |
Ga0181351_10768141 | 3300022407 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTTQNIF |
Ga0181351_11144633 | 3300022407 | Freshwater Lake | MTKGTHPKGICDLRKILHKAQVRLTQAGSLIMGYLRKIGSLVRGVNDLGNFYFAQPP |
Ga0181351_11831331 | 3300022407 | Freshwater Lake | MTKVICDLRKILHKAQVRLTQAGSLIIGYLRITRRNLLWLGHLGNFYFAKYTQNI |
Ga0214917_100024401 | 3300022752 | Freshwater | MTKGICDLRKFLHKAQVRLTKAGSLIIGYLRKIESIVRGINKLGDSYNAKCTQNRFR |
Ga0214917_100129201 | 3300022752 | Freshwater | MTKGICDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRGINKLGDSYNAKSTQNRFR |
Ga0214917_100430481 | 3300022752 | Freshwater | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRDINKLGDSYNAKCTQNRFR |
Ga0214917_103134941 | 3300022752 | Freshwater | MTKGTHPKGICDLRKFLQKAQVRLTQAGSLSIGYLRITRRNSLWLGHLGNFYFCKTPLNRFR |
Ga0214921_1000165511 | 3300023174 | Freshwater | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKAGSLVRSINDLGNFYFAKTPQNRFRPRLFCTN |
Ga0214921_1000181353 | 3300023174 | Freshwater | MTKGICDLRKFLHKAQVRLTEAGSLIIGYLRKIRRIVRGINKLGDSYNAKCTQNRFRPRLFCES |
Ga0214923_100415801 | 3300023179 | Freshwater | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKAGSLVRSINDLGNFYFAKTPQNRFR |
Ga0214919_100212614 | 3300023184 | Freshwater | MTKGICDLRKILHKAQVRLTQAGSLIIGYLRKIGSLVRDINKLGDSYNAKCTQNRFRPRLFCAS |
Ga0214919_100249428 | 3300023184 | Freshwater | MTKGTHPKGICDLRKFLQKAQVRLTQAGSLSIGYLRITRRNSLWLGHLGNFYFCKTPLNRFRGATFL |
Ga0208916_100009651 | 3300025896 | Aqueous | MTKVIRYLRKFLHKAQVRLKQAGSLIIGYLRKIGSIVRGINKLGDSYNAKCTQNRFR |
Ga0208916_103798062 | 3300025896 | Aqueous | MTKGICDLRKILHKAQVRLTEAGLLSIGYLRITRRNLLWLGHLGNFYFAQTTQNRFR |
Ga0209651_10001448 | 3300027581 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNRFRSATFLYEFPVKHL |
Ga0209651_11657002 | 3300027581 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQVRLTQAGSLIIGYLRKIGSLVRGVSNLGDSY |
Ga0208974_10026781 | 3300027608 | Freshwater Lentic | MTKGICDLRKFLHKAQVRLTEAGLLIIGYLRKTEARVRGINKLGDSYNAKYTQNRFR |
Ga0209357_10016493 | 3300027656 | Freshwater Lake | MTKGTHPKGICDLRKLLQKAQVRLTQAGSLIIGYLRKIGSLVRGVSNLGDSYIAKTTQNRFRPRLFCES |
Ga0209357_10716053 | 3300027656 | Freshwater Lake | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFY |
Ga0208975_100265118 | 3300027659 | Freshwater Lentic | MTKGICDLRKFLHKAQVRLTEAGLLIIGYLRKTEARVRGINKLEDSYNAKYTQNRFR |
Ga0209617_1000069413 | 3300027720 | Freshwater And Sediment | MTKGICDLRKFLHKAQVRLTEAGLLIIGYLRKTEARVRGINKLGDSYNAKYTQNRFRPRLFCAN |
Ga0209297_11660641 | 3300027733 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLYKIGSLVRSINNLEDSYIAKTTQNRFR |
Ga0209087_10066138 | 3300027734 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLYKIGSLVRSINNLEDSYIAKTTQNRFRPRIICGS |
Ga0209190_11727081 | 3300027736 | Freshwater Lake | MTKGICDLRKFLQKAQERLTQAGSLSIGYLRITRRNSLWLGHLGNFYFCKTPLNRFR |
Ga0209596_12858401 | 3300027754 | Freshwater Lake | MRKVICHLRKFLHKAQVRLTQAGSLIIGYLRKAGSLVRSINDLGNFYFAQTPQNRFR |
Ga0209296_11110031 | 3300027759 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQAGSLIIGYLRKIGRIVRGINKLGDSYYAKCTQNRFR |
Ga0209088_101310114 | 3300027763 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRGINELGDYYYAKCTQNRFR |
Ga0209246_100915763 | 3300027785 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTTQNRFR |
(restricted) Ga0247837_12475141 | 3300027970 | Freshwater | MTKGICDLRKILHKAEVRLTEAGSLIIGHLGITKRNLLWLRHLGNFYFVITLLNRFP |
Ga0209401_10205228 | 3300027971 | Freshwater Lake | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNSLWLGHLGNFYFYKTPLNRFR |
Ga0209298_100004591 | 3300027973 | Freshwater Lake | MTKGISDLRKFLHKAQVRLTQAGSLIIGYLRKIGSIVRSINKLGDSYDAKCTQNRFR |
Ga0209298_103850181 | 3300027973 | Freshwater Lake | MTKGICDLRKFLHKAQVRLTQVGSLIIGYLRKMVSIVRGINKLGDSYYAKSTQNRFR |
(restricted) Ga0247839_11213413 | 3300028553 | Freshwater | MTKGICDLRKFLHKAQVRLTKAGSLIIGHLGITKRNLLWLRHLGNFYFVITLLNRFPPRPFCAN |
Ga0315272_101360131 | 3300032018 | Sediment | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKTTQNRFR |
Ga0315284_117271351 | 3300032053 | Sediment | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKCTQNRFR |
Ga0315905_100017051 | 3300032092 | Freshwater | MTKGTHPKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKSLQNRFR |
Ga0315905_101773006 | 3300032092 | Freshwater | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNSLWLGHLGNFYFCKTPLNRFR |
Ga0315905_109170052 | 3300032092 | Freshwater | MTKGTHPKGICDLRKLLQKGQMRLTQAGSLIIGYLRKIGSLVRGVNDLGNFYFAKTPQNRFR |
Ga0315277_108499781 | 3300032118 | Sediment | MTKGICDLRKFLQKAQVRLTQAGSLSIGYLRITRRNLLWLGHLGNFYFAKCTQNRF |
Ga0315295_113724761 | 3300032156 | Sediment | MTKGICDLRKILHKAQVRLTQAGSLSIGYLRITRRNLLWPRHLGNFYFAKTPQTR |
Ga0334722_108377581 | 3300033233 | Sediment | MTKGTHPKGICDLRKILHKAQVRLTQAGSLSIGYLRKIGSLVRGVNDLGNFYFAKTTQNRFR |
Ga0334987_0050813_2_172 | 3300034061 | Freshwater | MTKVICHLRKFLHKAQVRLTQARSLIIGYLCKIGSIVRGINELGDSYNAKSTQNRFR |
Ga0334987_0574821_499_669 | 3300034061 | Freshwater | MTKGICDLRKFLHKGIMRLTQAGSLIIGYLRKIEAIVRGINKLGDFYNAKSTQNRFQ |
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