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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F100631 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 146 residues |
| Representative Sequence | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Number of Associated Samples | 93 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 72.55 % |
| % of genes near scaffold ends (potentially truncated) | 42.16 % |
| % of genes from short scaffolds (< 2000 bps) | 80.39 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (54.902 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.706 % of family members) |
| Environment Ontology (ENVO) | Unclassified (32.353 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (37.255 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Mixed | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 79.19% β-sheet: 0.00% Coil/Unstructured: 20.81% | Feature Viewer |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF01916 | DS | 9.80 |
| PF08240 | ADH_N | 7.84 |
| PF00107 | ADH_zinc_N | 5.88 |
| PF00883 | Peptidase_M17 | 1.96 |
| PF01370 | Epimerase | 1.96 |
| PF07238 | PilZ | 0.98 |
| PF04582 | Reo_sigmaC | 0.98 |
| PF12698 | ABC2_membrane_3 | 0.98 |
| PF00005 | ABC_tran | 0.98 |
| PF00440 | TetR_N | 0.98 |
| PF12704 | MacB_PCD | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG1899 | Deoxyhypusine synthase | Translation, ribosomal structure and biogenesis [J] | 9.80 |
| COG0260 | Leucyl aminopeptidase | Amino acid transport and metabolism [E] | 1.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 54.90 % |
| All Organisms | root | All Organisms | 45.10 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 14.71% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 12.75% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 9.80% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.84% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 6.86% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 3.92% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.92% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.94% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.94% |
| Bio-Ooze | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze | 2.94% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 1.96% |
| Freshwater Microbial Mat | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.96% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment | 0.98% |
| Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.98% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.98% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.98% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.98% |
| Microbial Mat On Rocks | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005829 | Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC | Environmental | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009609 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 | Environmental | Open in IMG/M |
| 3300009610 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 | Environmental | Open in IMG/M |
| 3300009678 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 | Environmental | Open in IMG/M |
| 3300010391 | Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300011402 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2 | Environmental | Open in IMG/M |
| 3300011416 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2 | Environmental | Open in IMG/M |
| 3300011430 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2 | Environmental | Open in IMG/M |
| 3300012179 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014299 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014868 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D | Environmental | Open in IMG/M |
| 3300014879 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D | Environmental | Open in IMG/M |
| 3300014884 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da | Environmental | Open in IMG/M |
| 3300015255 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D | Environmental | Open in IMG/M |
| 3300015256 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D | Environmental | Open in IMG/M |
| 3300015259 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
| 3300018063 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2 | Environmental | Open in IMG/M |
| 3300018071 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1 | Environmental | Open in IMG/M |
| 3300018077 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1 | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
| 3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300019228 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019238 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019257 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
| 3300019458 | Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG | Environmental | Open in IMG/M |
| 3300019487 | White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG | Environmental | Open in IMG/M |
| 3300020063 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020084 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m | Environmental | Open in IMG/M |
| 3300020186 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1 | Environmental | Open in IMG/M |
| 3300020200 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m | Environmental | Open in IMG/M |
| 3300020213 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2 | Environmental | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300032000 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
| 3300032177 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0 | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034662 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034666 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034674 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034676 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034678 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| INPhiseqgaiiFebDRAFT_1056843141 | 3300000364 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAAPAALERTAEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| JGI1027J11758_118253441 | 3300000789 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAAPAALERTAEEKSIRPFDKEKAKALAA |
| JGI10216J12902_1067382081 | 3300000956 | Soil | MLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETVLENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN* |
| Ga0062590_1022631392 | 3300004157 | Soil | MSKESPLSSLLGQLNKEYSLSEEFKNRVTHLIERLEGLNLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSRPTPRPALASPAEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0062591_1012338461 | 3300004643 | Soil | MLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN* |
| Ga0065715_107533322 | 3300005293 | Miscanthus Rhizosphere | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPPAALERSSEEKSIRPFDKEKAKALAAFA |
| Ga0070680_1003920752 | 3300005336 | Corn Rhizosphere | MASCVECEHFADLLGSTRIQTHHSFIVDLHCLRSFMSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLNSKPAPPTALERSS |
| Ga0070689_1019190801 | 3300005340 | Switchgrass Rhizosphere | FMSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0070688_1005553332 | 3300005365 | Switchgrass Rhizosphere | KRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN |
| Ga0070705_1002245481 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0070700_1015133811 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | STSQIFWVALVFKTHHSFIVDFDCLRSFMSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAVLERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0068857_1020004411 | 3300005577 | Corn Rhizosphere | TQLNLSTFFLEVPMLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN* |
| Ga0074479_105155281 | 3300005829 | Sediment (Intertidal) | MSKESPLSTLLGQLNKEYSLSEEFKNRVTQLIERLEGLNLPAEQVQTLVGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPTPRPALADPAEEKSIRP |
| Ga0068860_1011047121 | 3300005843 | Switchgrass Rhizosphere | LNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN* |
| Ga0075428_1000213092 | 3300006844 | Populus Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAARERSSEEKSIRPFDKEKARALAAFASISSKNSRVN* |
| Ga0075428_1025961521 | 3300006844 | Populus Rhizosphere | THHSFIVDLHCLRSFMSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLGSKPAPPAALERSSEKSIRPFDKERAKALAAFASISSKNSRVN* |
| Ga0075421_10000389118 | 3300006845 | Populus Rhizosphere | MPKENPLRDLLGQLNQEFSLSEEFKTRVGRLIDRLDGLQLPQEQVETLMAKVRDTYERQALVEACREESHKSFDRIQSAITAYSNALNNIDRRLRQAETTLENLSSANSLSQRAREEKAVVLFDKEKARALAAFASMNSKNSRIN* |
| Ga0075421_1007688852 | 3300006845 | Populus Rhizosphere | MSKDSPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQIQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPPTALLGRSAEEKSIRPLDKEKAKALAAFANISSKNSRVN* |
| Ga0075421_1015350661 | 3300006845 | Populus Rhizosphere | MSKESPLSTLLGQLNKEYSLSEEFKNRVTHLIERLEGLNLPDDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSVKPTAALVQSSEEKSIRPIDKEKAKA |
| Ga0075425_1006630292 | 3300006854 | Populus Rhizosphere | MSKESPLSSLLGQLNKEYSLSEEFKNRVTHLIERLEGLNLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSTALNHINQRLDQAEAALENLLSSKPMPRPALPSPAEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0075425_1029957111 | 3300006854 | Populus Rhizosphere | MSKESPLSALLGQLNKEYDLSEEFKTRVTRLIERLEGLNLPPDQVQTLLGKVRETYERQVLVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSQVKARPALQHPQEGKIVPFDKEKAKALAAFASITSKNSRIN* |
| Ga0075434_1005509252 | 3300006871 | Populus Rhizosphere | MSKESPLSALLGQLNKEYDLSEEFKTRVTRLIERLEGLNLPPDQVQTLLGKVRETYERQVLVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSQEKARPALQRPQEGKAIVPFDKEKAKALAAFASITSKNSRIN* |
| Ga0075429_1013762482 | 3300006880 | Populus Rhizosphere | SLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPSAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0075429_1016736192 | 3300006880 | Populus Rhizosphere | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAK |
| Ga0111539_102810662 | 3300009094 | Populus Rhizosphere | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLNSKPAPPTALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0111538_100293324 | 3300009156 | Populus Rhizosphere | MASCVECEHFAEILGSTRIQTHHSFIVDLHCLRSFMSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAARERSSEEKSIRPFDKEKARALAAFASISSKNSRVN* |
| Ga0105242_129651371 | 3300009176 | Miscanthus Rhizosphere | STSQIFWAALVFKTHHSFIVDLHCLRSFMSKESPLSALLAQLNKEYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNS |
| Ga0105347_14201271 | 3300009609 | Soil | LLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPPAALERSSEEKSIRPFDKERAKALPAFSSISIKNSRVN* |
| Ga0105340_12323931 | 3300009610 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0105252_103583562 | 3300009678 | Soil | MSKESPLSALLGQLNKEYSLSGECKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSILPFDKDKAKALAAFASISSKNSRIN* |
| Ga0136847_109547261 | 3300010391 | Freshwater Sediment | LRVFMSKESPLSALLDQLNKEYSLSEEFKSRVTQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESLKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRAASPRPSEEKTIFPFDKEKAKALVAFASISSKNSRVN* |
| Ga0134127_107922251 | 3300010399 | Terrestrial Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLGSKPAPPAALERSSEKSIRPFDKERAKALAAFASISSKNSRVN* |
| Ga0134127_133858161 | 3300010399 | Terrestrial Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQLQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAAPAALERTAEEKSIRPFDKEKAK |
| Ga0134122_103412011 | 3300010400 | Terrestrial Soil | VTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAAPAALERTAEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0134123_106748341 | 3300010403 | Terrestrial Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSI |
| Ga0137356_10145993 | 3300011402 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSILPFDKDKAKALAAFASISSKNSRIN* |
| Ga0137422_10551682 | 3300011416 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSILPFDKDKAKALAAFACISSKNSRIN* |
| Ga0137423_10870731 | 3300011430 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRHASPRSSEEKSILPFDKDKARALAAFASISSKNSRIN* |
| Ga0137334_10268971 | 3300012179 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQDEAALKNLLSSKPALHPASPRSSEEKSIL |
| Ga0157285_101625932 | 3300012897 | Soil | RVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAVLERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0137410_113450731 | 3300012944 | Vadose Zone Soil | MSKESPLSALLGQLNKEYGLSEEFKNRVTKLIERLEGLNLPADQLQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALEDLLSSKPAPRPALARSSEEKSIRPFDKEKAKALAAFASISSK |
| Ga0164302_111178431 | 3300012961 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAAWENLLSSKPAAPAALERTAEEKSIRPFDKEKAKAL |
| Ga0163162_106692001 | 3300013306 | Switchgrass Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0157375_121556952 | 3300013308 | Miscanthus Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKARALAAFASISSKNSRVN* |
| Ga0075303_10241772 | 3300014299 | Natural And Restored Wetlands | FMSKDSPLSALLGQLNREYNLSEEFKNRVSNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALDSLLSSKAAPPAALNRSPEEKSIRLFDKEKAKAFAAFASISSKNSRIN* |
| Ga0163163_113742761 | 3300014325 | Switchgrass Rhizosphere | RSRNGQTQLNLSTFFLEVPMLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN* |
| Ga0180088_10421121 | 3300014868 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSTLPFDKDKAKALAAFASISSKNSRIN* |
| Ga0180062_10175761 | 3300014879 | Soil | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSILP |
| Ga0180104_10303952 | 3300014884 | Soil | CIVDLHWLRVFMSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRIQDAIQSYSNALNNINQRLDQAEAALENLLSSKPVPRYASPRSSEEKSIIPFDKDKAKALAAFSSISSKNSRINEPG* |
| Ga0180077_10814051 | 3300015255 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0180073_10308242 | 3300015256 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAALAGSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0180085_100023213 | 3300015259 | Soil | MSKDSPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALEHLLSSKPTAPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0132258_127156162 | 3300015371 | Arabidopsis Rhizosphere | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPEDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNMNQRLDQAEAALENLLSSKPAAPAALERTAEEKSIRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0132256_1000128576 | 3300015372 | Arabidopsis Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSVRPFDKEKAKALAAFASISSKNSRVN* |
| Ga0132255_1033723891 | 3300015374 | Arabidopsis Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPLAARERSSEEKSIRPFDKERAKALAAFASISSKNSRVN* |
| Ga0163161_104209322 | 3300017792 | Switchgrass Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0184638_12975291 | 3300018052 | Groundwater Sediment | MSKESPLSALLGQLNREYTLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESQKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKSAPPAALARSSEEKSIRPLDKEKAKALAAFASISSKNSRVN |
| Ga0184637_100705723 | 3300018063 | Groundwater Sediment | GQLNKEYSLSEEFKNRVTQLIERLEGLNLPADQVQALLRKVRETYERQLLVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRPASPRLSEEKTIFPFDKEKAKALVAFASISTKNSRIN |
| Ga0184618_104602161 | 3300018071 | Groundwater Sediment | SKESPLSALLDQLNKEYSLSKEFKNRVTELIERLEGLNLPADQLQTLLRKVRETYERQVMVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALESLLSSKPVPRPTAPRSSEERAIIPLDKEKAKALAAFASISSKNSRIN |
| Ga0184633_101385172 | 3300018077 | Groundwater Sediment | MPKESPLSALLGQLNKEYSLSEEFTNRVTQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRPASPRLSEEKTIFPFDKEKAKALVAFASISTKNSRIN |
| Ga0184625_100976103 | 3300018081 | Groundwater Sediment | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0184639_100273272 | 3300018082 | Groundwater Sediment | MPKESPLSALLGQLNKEYSLSEEFKNRVSQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCRKESRRSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRPASPRLSEEKTIFPFDKEKAKALVAFASISTKNSRIN |
| Ga0184628_100367862 | 3300018083 | Groundwater Sediment | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPPAALERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0190270_100823912 | 3300018469 | Soil | MSKENPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLNSKPAPPAALERSSEEKSIRPFDKEKAKAFAAFASISSKNSRVN |
| Ga0180119_10844961 | 3300019228 | Groundwater Sediment | CGLFPIIRVRLALKTHHRCIVDLHWLRVFMSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRVQDAIQSYSNALNNINQRLDQAEAALENLLSSKPAPHPASPRSSEEKSILPFDKDKAKALAAFASISSKNSRIN |
| Ga0180112_10768271 | 3300019238 | Groundwater Sediment | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPTDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAALAGSSEEKSIRPFDKEKAKALAAFASISSKNSR |
| Ga0180115_13095401 | 3300019257 | Groundwater Sediment | LNREYSLSEEFKNRVTNLIERLEGLDLPTDQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALSNINQRLDQAEAALENLLSSKPAPPAALAGSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0173481_105657011 | 3300019356 | Soil | MLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLASGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN |
| Ga0173482_103346882 | 3300019361 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0173479_104793381 | 3300019362 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLGSKPAPPAALERSSEEKSIRPFDKEKARALAAFASISSKNSRVN |
| Ga0187892_1000033415 | 3300019458 | Bio-Ooze | MSKESPLRALLGQLNQEYNLSEEFKTRVGHLIDRLDGLNLPVDQVNTLLGKVRETYERQVLVESCREESRKSLDRIQSTIQAYSSALNNVNQRLDQAEAALESLLSSNPAQQPARGEKAVVPFDKEKAKALAAFASINTKNSRVN |
| Ga0187892_100074955 | 3300019458 | Bio-Ooze | MSKESPLSTLLGQLNKEYSLSEEFKNRVTHLIERLEGLNLPEDQVQTLVGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAAAMAQSMEDKSIRPIDKEKAKALAAFASISSKNSRVN |
| Ga0187892_102075321 | 3300019458 | Bio-Ooze | MSKESPLSALLGQLNKEYSLSEEFKNRVTQLIERLEGLNLPAEQVQALLGKVRETYERQVLVESCREESRKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPALRPASPRHSEEKTILPFDKEKAKALAAFASISSKNSRIN |
| Ga0187893_1000869912 | 3300019487 | Microbial Mat On Rocks | MSKESRLSALLGQLNKEYSLSEEFKNRVSQLIERLDGLNLPADQVQTLLGKVRETYERQVLVESCREESRRSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPPTLPTSRRPAEEKPMHPFDKEKAKALAAFASISSKNSRIN |
| Ga0180118_11338531 | 3300020063 | Groundwater Sediment | MSKESPLSALLGQLNKEYSLSGEFKNRVTQLIERLEGLNLPDEQVQVLLGKVRETYERQVLVESCREESRKSLDRIQDAIQSYSNALNNINQRLDQAEAALENLLSSKPVPRYASPRSSEEKSIIPFDKDKAKALAAFASISSKNSRIN |
| Ga0194110_104283142 | 3300020084 | Freshwater Lake | MSKESPLSKLLGQLDREYSLSEEFKNRVTRLVERLEGLNLPAEQVQILLGKVRETYDRQVLVESCREESRRSLDRIHSAIQSYSSALNNINQRLDQAEAALESLLSSKAAVRPVPPRPSEEKAILPFDKEKARALAAFVSISSKNSRIN |
| Ga0163153_101150473 | 3300020186 | Freshwater Microbial Mat | MSKESPLSALLGQLNKEYSLSEEFKNRVTLLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCRQESRKSLDRIQGAIQSYSNALNNINQRLDQAEVALENLLSSKPAPRPASPCLSEEKAIFPFDKDKAKALAAFASLSSKNSRIN |
| Ga0194121_100322157 | 3300020200 | Freshwater Lake | SKESPLSKLLGQLDREYSLSEEFKNRVTRLVERLEGLNLPAEQVQILLGKVRETYDRQVLVESCREESRRSLDRIHSAIQSYSSALNNINQRLDQAEAALESLLSSKAAVRPVPPRPSEEKAILPFDKEKARALAAFVSISSKNSRIN |
| Ga0163152_103597982 | 3300020213 | Freshwater Microbial Mat | MSKESPLSALLGQLNKEYSLSEEFKNRVTLLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCRQESRKSLDRIQGAIQSYSNALNNINQRLDQAEVALENLLSSKPAPRPASPCLSEEKAIFPFDK |
| Ga0207681_103427841 | 3300025923 | Switchgrass Rhizosphere | MLKDSPLRSLLQQLNQEYCLSDDFKRRVAELVDRLELLDLPPDQVQILRGKVRETYERQVLVESCRDESRKSLDRIQGAISAYSNALSNINQRLSQAETALENLLSSGPSSPPVEEKPMSRIDKERARALAAFASINSKNSRVN |
| Ga0207709_115739201 | 3300025935 | Miscanthus Rhizosphere | AQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPLAARERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0207712_100749304 | 3300025961 | Switchgrass Rhizosphere | PLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLRSKPAPPAGRERSSEEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0207708_111432421 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLGSKPAPPAALERSSEKSIRPFDKERAKALAAFASISSKNSRIN |
| Ga0207641_109483001 | 3300026088 | Switchgrass Rhizosphere | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAAPAALERSSEKSIRPFDKEKAKALAAFASISSKNSRVN |
| Ga0207428_101640151 | 3300027907 | Populus Rhizosphere | VECEHFADLLGSTRIQTHHSFIVDLHCLRSFMSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAARERSSEEKSIRPFDKEKARALAAFASISSKNSRVN |
| Ga0209382_100148036 | 3300027909 | Populus Rhizosphere | MPKENPLRDLLGQLNQEFSLSEEFKTRVGRLIDRLDGLQLPQEQVETLMAKVRDTYERQALVEACREESHKSFDRIQSAITAYSNALNNIDRRLRQAETTLENLSSANSLSQRAREEKAVVLFDKEKARALAAFASMNSKNSRIN |
| Ga0209382_102202002 | 3300027909 | Populus Rhizosphere | MSKDSPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQIQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPPTALLGRSAEEKSIRPLDKEKAKALAAFANISSKNSRVN |
| Ga0308187_103943041 | 3300031114 | Soil | MSKESPLSALLGQLNREYSLSKEFKNRVTELIERLEGLNLPADQLQTLLGKVRETYERQVLVESCREENRKSLDRIQGAIQSYSNALNNINQRLDQAEAALESLLSSKPVPRPTSPRSSEERAIIPLDKEKAKALAAFASISSKNSRIN |
| Ga0310888_100146263 | 3300031538 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
| Ga0310886_100132453 | 3300031562 | Soil | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
| Ga0315290_101710702 | 3300031834 | Sediment | MSKESPLSALLDQLNKEYSLSEEFKSRVNQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESLKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRAASPRPSEEKTIFPFDKEKAKALVAFASISSKNSRVN |
| Ga0310900_119621181 | 3300031908 | Soil | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSE |
| Ga0310903_104182041 | 3300032000 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAKALA |
| Ga0310890_100448713 | 3300032075 | Soil | MSKESPLSALLAQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPLAARERSSEEKSIRPFDKERAKALAAFASISSKNSRVN |
| Ga0315281_110630541 | 3300032163 | Sediment | MSKESPLSALLDQLNKEYSLSEEFKSRVTQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESLKSLDRIQGAVQSYSNALNNINQRLDQAEAALENLLSSKPAPRAASPRPSEEKTIFPFDKEKAKALVAFASISSKNSRVN |
| Ga0315276_104643671 | 3300032177 | Sediment | MSKESPLSALLDQLNKEYSLSEEFKSRVNQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESLKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAPRAASPRPSEEKTIFPFDKEKAKALVAFASIS |
| Ga0370545_169533_1_423 | 3300034643 | Soil | MSKESPLSTLLGQLNKEYSLSEEFKSRVTQLIERLEGLNLPAEQVQTLLGKVRETYERQVLVESCREESLKSLDRIQGAIQSYSNALNNINQRLDQAEAALENLLSSKPAQRPASPPLSEEKAIFPFDKDKAKALAAFASL |
| Ga0314783_083009_124_570 | 3300034662 | Soil | MSKESPLSALLGQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
| Ga0314788_105023_108_554 | 3300034666 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFEREKATALAAFASISSKNSRVN |
| Ga0314799_011500_349_795 | 3300034674 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLVKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALESLLSSKPAPPAALERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
| Ga0314801_021566_84_530 | 3300034676 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAALERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
| Ga0314803_050237_90_536 | 3300034678 | Soil | MSKESPLSALLSQLNREYSLSEEFKNRVTNLIERLEGLDLPADQVQTLLGKVRETYERQVLVESCREESRKSLERIQGAIQSYSNALTNINQRLDQAEAALDSLLSSKPAPPAAPERSSEKSIRPFDREKAKALAAFASISSKNSRVN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |