Metagenome / Metatranscriptome Family F100595

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100595
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	114 residues
Representative Sequence	VCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (44.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.863 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 53.70% Coil/Unstructured: 46.30%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08450	SGL	6.86
PF11954	DUF3471	4.90
PF07635	PSCyt1	2.94
PF00069	Pkinase	2.94
PF04377	ATE_C	2.94
PF00753	Lactamase_B	1.96
PF00144	Beta-lactamase	1.96
PF01850	PIN	0.98
PF13683	rve_3	0.98
PF07332	Phage_holin_3_6	0.98
PF00890	FAD_binding_2	0.98
PF07693	KAP_NTPase	0.98
PF01515	PTA_PTB	0.98
PF07637	PSD5	0.98
PF11303	DUF3105	0.98
PF12543	DUF3738	0.98
PF02687	FtsX	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.76
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	6.86
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	6.86
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	2.94
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.96
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.98
COG4928	Predicted P-loop ATPase, KAP-like	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.92 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	9.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.98 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	9.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.98 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.98 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Ruminococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus	0.98 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Ruminococcus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	0.98 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1057723	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300000956\|JGI10216J12902_100869756	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300000956\|JGI10216J12902_102519896	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300000956\|JGI10216J12902_118163414	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300004114\|Ga0062593_103483237	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005183\|Ga0068993_10388586	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300005288\|Ga0065714_10190914	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300005289\|Ga0065704_10615236	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300005290\|Ga0065712_10002233	All Organisms → cellular organisms → Bacteria → Proteobacteria	5347	Open in IMG/M
3300005330\|Ga0070690_101584355	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005335\|Ga0070666_10171053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1521	Open in IMG/M
3300005340\|Ga0070689_102045197	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300005347\|Ga0070668_100489452	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300005353\|Ga0070669_101608188	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300005355\|Ga0070671_100415658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1152	Open in IMG/M
3300005367\|Ga0070667_101686227	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300005456\|Ga0070678_100902497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	808	Open in IMG/M
3300005456\|Ga0070678_101829133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	573	Open in IMG/M
3300005457\|Ga0070662_100128091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1953	Open in IMG/M
3300005459\|Ga0068867_101989953	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300005535\|Ga0070684_100393013	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300005543\|Ga0070672_100410827	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005546\|Ga0070696_101358875	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300005564\|Ga0070664_101196735	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300005577\|Ga0068857_102447547	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005617\|Ga0068859_102608469	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005719\|Ga0068861_101154062	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300006049\|Ga0075417_10512616	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300006845\|Ga0075421_101365206	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300006852\|Ga0075433_10123026	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300006880\|Ga0075429_100597658	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300009094\|Ga0111539_13448762	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300009098\|Ga0105245_13089740	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300009100\|Ga0075418_10003454	All Organisms → cellular organisms → Bacteria	18040	Open in IMG/M
3300009162\|Ga0075423_12025751	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300009176\|Ga0105242_12242316	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300009527\|Ga0114942_1341890	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300009609\|Ga0105347_1321958	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300009789\|Ga0126307_10690562	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300010040\|Ga0126308_10056504	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300011119\|Ga0105246_12551121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300011445\|Ga0137427_10276109	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300012040\|Ga0137461_1150659	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300012486\|Ga0157331_1011485	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300012509\|Ga0157334_1046739	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300012514\|Ga0157330_1028197	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300012899\|Ga0157299_10273697	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012907\|Ga0157283_10110484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	753	Open in IMG/M
3300012907\|Ga0157283_10299684	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300012910\|Ga0157308_10166200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	717	Open in IMG/M
3300012913\|Ga0157298_10089958	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300012913\|Ga0157298_10192548	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300012915\|Ga0157302_10445370	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300013296\|Ga0157374_12976361	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300014325\|Ga0163163_10401675	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300014326\|Ga0157380_11241432	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300014326\|Ga0157380_12438748	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300015374\|Ga0132255_100726627	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018084\|Ga0184629_10551154	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300018422\|Ga0190265_10136570	All Organisms → cellular organisms → Bacteria → Acidobacteria	2373	Open in IMG/M
3300018469\|Ga0190270_10639186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300018469\|Ga0190270_11659224	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300018476\|Ga0190274_12377886	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300019361\|Ga0173482_10598982	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300025885\|Ga0207653_10136535	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300025885\|Ga0207653_10419975	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300025899\|Ga0207642_10262153	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300025908\|Ga0207643_10138342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300025923\|Ga0207681_10860684	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300025925\|Ga0207650_10288076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1339	Open in IMG/M
3300025926\|Ga0207659_10058714	All Organisms → cellular organisms → Bacteria → Acidobacteria	2762	Open in IMG/M
3300025930\|Ga0207701_10382183	All Organisms → cellular organisms → Bacteria → Acidobacteria	1215	Open in IMG/M
3300025937\|Ga0207669_10394574	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300025940\|Ga0207691_11452762	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300025941\|Ga0207711_12002737	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300025972\|Ga0207668_11105612	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300026023\|Ga0207677_10193500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1610	Open in IMG/M
3300027617\|Ga0210002_1016166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300028380\|Ga0268265_10312025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1420	Open in IMG/M
3300031548\|Ga0307408_100860333	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300031562\|Ga0310886_10879766	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300031854\|Ga0310904_10049549	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300031854\|Ga0310904_11025173	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300031858\|Ga0310892_10081493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1715	Open in IMG/M
3300031892\|Ga0310893_10108845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1028	Open in IMG/M
3300031908\|Ga0310900_10768784	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300031913\|Ga0310891_10205461	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300031940\|Ga0310901_10354724	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300032002\|Ga0307416_103892614	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300032012\|Ga0310902_10227106	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032013\|Ga0310906_10480580	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300032013\|Ga0310906_11165398	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300032017\|Ga0310899_10166202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	953	Open in IMG/M
3300032075\|Ga0310890_10033290	All Organisms → cellular organisms → Bacteria → Acidobacteria	2801	Open in IMG/M
3300032075\|Ga0310890_10220323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300032157\|Ga0315912_10268004	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1344	Open in IMG/M
3300032179\|Ga0310889_10227907	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300032179\|Ga0310889_10555405	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300032421\|Ga0310812_10126760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1070	Open in IMG/M
3300033550\|Ga0247829_10684041	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300034149\|Ga0364929_0159362	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300034659\|Ga0314780_198726	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.90%
Host-Associated	Host-Associated	45.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.02%
Plants	Host-Associated → Plants	45.10%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.71%
Sediment	Environmental → Aquatic → Sediment	3.92%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Marine	Environmental → Aquatic → Marine	0.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.82%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10577231	2228664021	Soil	MLENVCNENNRSRLVGAERAGVSVDAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFSLDAKGTVTRLV
JGI10216J12902_1008697562	3300000956	Soil	DMLENVCNENNRSRLVGVERAGVSVDAAVLTRYEGQYAFSGGSRTVAGFMGMNHKVTLVNGRLHLNALPLIPLSATTFESTGAIAEFFLDASGRVTRLVLGQTEGEAVYTRK*
JGI10216J12902_1025198962	3300000956	Soil	MLEAVCNENNRSRLVGVQRAGVSIDAAVLARYEGQYGFSAGSRVVAGFMGMNHKVRLVNGRLYLNALPLIPLSATTFESTGAIAEFFVDANGAVARLVLGQTEGEAVYTRK*
JGI10216J12902_1181634141	3300000956	Soil	LASWASSGQGVAVDTAVLARYEGQYAFSAGSRTVAGFMGTNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLSQTEGEAVYTPRQ*
Ga0062593_1034832371	3300004114	Soil	AGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0068993_103885861	3300005183	Natural And Restored Wetlands	RSRLVGVQRAAVAVDAAVLARYQGRYAFSAGSRVVAGFMGMNHTVTLVNGRLYLNALPLIPLSATTFESTGAVAEFFLDASGAVTRLVLGQTEGEAVYTRATAGIDGTGQRR*
Ga0065714_101909142	3300005288	Miscanthus Rhizosphere	MLENVCNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVDDRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYTPAPRAR*
Ga0065704_106152361	3300005289	Switchgrass Rhizosphere	LVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK*
Ga0065712_100022336	3300005290	Miscanthus Rhizosphere	RADTDMLENVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070690_1015843551	3300005330	Switchgrass Rhizosphere	DMLENVCNENNRSRLVGVQRAGVAVETAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSQTRFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070666_101710531	3300005335	Switchgrass Rhizosphere	NENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSQTRFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070689_1020451971	3300005340	Switchgrass Rhizosphere	ENNRSRLVGVQRAGVPVDAAVLARYEGRYAFSSGSRTVAGFMGMNHKVTLVEGRLYLNALPLIPLSATKFESTGAIAEFFVDASGKVTRLALGQTEGEAVYLPAR*
Ga0070668_1004894521	3300005347	Switchgrass Rhizosphere	VRYQADADMLENVCSENSRSRLVGVQRAGVPVDTAVLARYQGQYAFSGGSRTVAGFMGTNHKVTLVNGRLYLNALPLIPLSPTLFESTGAVAQFFVDASGAVTHLVLGQTEGEAVYLPASR*
Ga0070669_1016081881	3300005353	Switchgrass Rhizosphere	LTLSLPVRYQADADMLENVCNENNRSRLVGVQRAGVRVDAAVLARYEGQYEFSGGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSSTMFESTGAVAQFFLDASGAVTRLVLGQTEGEAVYLPVTRAAK*
Ga0070671_1004156582	3300005355	Switchgrass Rhizosphere	RSRLVGVQRAGVAVETAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSQTRFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070667_1016862271	3300005367	Switchgrass Rhizosphere	ENNRSRLVGVQRAGVAVDTAILARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070678_1009024971	3300005456	Miscanthus Rhizosphere	LVGVQRAGVAVDRAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSQTRFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070678_1018291331	3300005456	Miscanthus Rhizosphere	SLPVSYRADTDMLENVCNENNRSRLVGIERAGVSVDTAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLDALPLIPLSATMFESTGAIAQFFLDANGTVTRLVLGQTEGEAVYTPVCCATNNRNPRK*
Ga0070662_1001280911	3300005457	Corn Rhizosphere	SLPVSYRADTDMLENVCNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYTPAPRAR*
Ga0068867_1019899531	3300005459	Miscanthus Rhizosphere	CNENNRSRLVGVERAGVPVDTAVLARYQGQYGFSAGSRVVAGFMGMNHTVTLVNGRLYLNALPLIPLSATTFESTGAVAEFFLDASGRVTRLVLGQTEGEAVYTRK*
Ga0070684_1003930131	3300005535	Corn Rhizosphere	ADTDMLENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYIPVCCATDRDPRK*
Ga0070672_1004108273	3300005543	Miscanthus Rhizosphere	RLVGVQRAGVKVDAAVLGRYEGQYAFSGGSRTVAGFMGMNHKVTFVNGRLYLNALPLIPLSPTMFESTGAVAEFHVDASGAVTRLVLGQTEGEAVYLPGNRDRK*
Ga0070696_1013588751	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ADTDMLENVCNENNRSRLVGVQRAGVAVDPAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0070664_1011967352	3300005564	Corn Rhizosphere	NVCNENNRSRLVGAERAGVSADAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDAKGTVTRLVLGQTEGEAIYTPAPRAR*
Ga0068857_1024475472	3300005577	Corn Rhizosphere	TDMLENVCNENNRSRLVGAERAGVSVDMAVLARYEGQYAFSAGSRTVAGFMGMNHTVTLVDGRLYLNALPLIPLSATMFESTGAIAQFFLDASGTVTRLVLGQTEGEAVYTPVCCATNRNLRK*
Ga0068859_1026084692	3300005617	Switchgrass Rhizosphere	PVSYQADTDMLENVCNENNRSRLVGVQRAGVPVDAAVLARYEGRYAFSSGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSTTKFESTGAIAEFFVDASGKVTRLALGQTEGEAVYLPAR*
Ga0068861_1011540621	3300005719	Switchgrass Rhizosphere	VCNENNRDLVHLVGTARAGVQVGPAVLARYIGRYAFRDGSRTVAGFMGMNQNVTLVADRLYLNALPLVPLSETTFESTGAIVEFFVDASGQVTRLVLGQTEGEATYDLKR*
Ga0075417_105126162	3300006049	Populus Rhizosphere	LSLPVSYQADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0075421_1013652062	3300006845	Populus Rhizosphere	MLENVCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0075433_101230261	3300006852	Populus Rhizosphere	DMLENVCNENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK*
Ga0075429_1005976582	3300006880	Populus Rhizosphere	RAGVTVDATVLARYEGQYVFSGGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIATFSLDASGSVTRLVLGQTEGEAVYTLRK*
Ga0111539_134487622	3300009094	Populus Rhizosphere	PLTLSLPVNYRADTDMLENVCNENNRSRLVGVQRPGVSVDTAVLARYQGQYAFSAGSRIVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTTRK*
Ga0105245_130897401	3300009098	Miscanthus Rhizosphere	SGVSVDTAVLSRYQGHYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK*
Ga0075418_1000345424	3300009100	Populus Rhizosphere	VERAGVSVDTAVLARYQGQYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFFLDARGTVTRLVLGQTEGEAVYTPRLLRDEPQPPQVNPD*
Ga0075423_120257512	3300009162	Populus Rhizosphere	MLENVCNENNRSRLVGAERAGVSVDTAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVDDRLYLDALPLIPLSATMFESTGAIAEFFMDANGAVTRLVLGQTEGEAIYTPAQRAR*
Ga0105242_122423162	3300009176	Miscanthus Rhizosphere	YQADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFEATGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0114942_13418901	3300009527	Groundwater	RSRLVGVERAAVPVDAAILARYQGRYAFSSGSRTVAGFMGMNHRVTLVNGRLYLNALPLIPLSTTMFESTGAIAEFFLDAGGTVTRLVLGQTEGEAVYTPRR*
Ga0105347_13219581	3300009609	Soil	NNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0126307_106905621	3300009789	Serpentine Soil	MRENVCSENNRSHLVGVERAGVPVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRR*
Ga0126308_100565041	3300010040	Serpentine Soil	MLENVCNENNRSHLVGVERAGVPVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRR*
Ga0105246_125511211	3300011119	Miscanthus Rhizosphere	NENNRDVVHLVGTARAGVRVGAEVLARYIGRYAFRDGSRTVAGFMGMNQNVTLVNDRLYLNALPLNPLSETTFESTGAIAEFFV*
Ga0137427_102761091	3300011445	Soil	QRAGVAVDTAVLARYEGQYAFSAGSPIVAGFMGMNQRVTLVNGRLYLNALPLIPLSPTMFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0137461_11506592	3300012040	Soil	GVQRAGVAVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSRTRFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0157331_10114851	3300012486	Soil	LPVNYQADTDMLENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFVVDANGTVTRMALGQTEGEAVYTPVCCATDRDPRK*
Ga0157334_10467391	3300012509	Soil	GVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK*
Ga0157330_10281971	3300012514	Soil	ETLTKPLTLSLPVSYRADTDMLENVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0157299_102736971	3300012899	Soil	KPLTLSLPVSYRADTDMLENVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0157283_101104842	3300012907	Soil	DMLENVCNENNRSRLVGVQRAGVAVDAAVLARYQGQYAFSGGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYQRVSASVPASRPPP*
Ga0157283_102996842	3300012907	Soil	DMLENVCNENNRSRLVGAERAGVSVDAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK*
Ga0157308_101662002	3300012910	Soil	SRLVGVQRAGVAVDAAVLARYQGQYAFSGGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK*
Ga0157298_100899581	3300012913	Soil	VSYRADTDMLENVCNENNRSRLVGAERAGVSVDAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK*
Ga0157298_101925482	3300012913	Soil	ADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK*
Ga0157302_104453702	3300012915	Soil	CNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVDDRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYTPAPRAR*
Ga0157374_129763611	3300013296	Miscanthus Rhizosphere	PVNYQADTDMLENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK*
Ga0163163_104016753	3300014325	Switchgrass Rhizosphere	ADMLENVCNENSRSRLVGVQRAGVKVDAAVLGRYEGQYAFSGGSRTVAGFMGMNHKVTFVNGRLYLNALPLIPLSPTMFESTGAVAEFHVDASGAVTRLVLGQTEGEAVYLPGNRDRK*
Ga0157380_112414321	3300014326	Switchgrass Rhizosphere	VSYRADTDMLENVCNENNRSRLVGVQRAGVAVDTAILARYQGQYAFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0157380_124387481	3300014326	Switchgrass Rhizosphere	YRADTDMLENVCNENNRSRLVGAERAGVSVDAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDAKGTVTRLVLGQTEGEAIYTPAPRAR*
Ga0132255_1007266273	3300015374	Arabidopsis Rhizosphere	VCNENSRSRLVGVQRAGGKVDAAVLGRYEGQYAFSGGSRTVAGFMGMNHKVTFVNGRLYLNALPLIPLSPTMFESTGAVAEFHVDASGAVTRLVLGQTEGEAVYLPGNRDRK*
Ga0184629_105511542	3300018084	Groundwater Sediment	CNENNRSRLVGVQRAGVAVDPAVLARYEGQYAFSAGSRTVAGFMGMDHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRR
Ga0190265_101365702	3300018422	Soil	TYRADTDMLENVCAENNRDIPHLVGVERTSVPLDAAVLARYVGRYSFNGDSRIVAGFMGMDQNVTLVDGLLYLNALPLIALSDTKFESSGAIAEFFLDTRGVVTRMVLGQTEGEASYTPR
Ga0190270_106391863	3300018469	Soil	LSLSLPVSYRADTDMLENVCNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNDRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYTPAPRAR
Ga0190270_116592241	3300018469	Soil	DMLENVCAENNRDIPRLVGVERTSVPLDAAVLARYVGRYSFSGESRIVAGFMGMNQNVTLVDGQLYLNALPLIALSDTKFESSGATAEFFLDTRGVVTRMVLGQTEGEATYTPRR
Ga0190274_123778862	3300018476	Soil	YRADTDMLENVCAENNRDIPRLVGVERTGVPLEAAVLARYVGRYSFNGGSRTVAGFMGMDQNVTLVDGRLYLNALPLIALSDTKFESSGAIAEFFLDTRGVVTRMVLGQTEGEATYTPRP
Ga0173482_105989821	3300019361	Soil	DTDMLENVCNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYAPAPRAR
Ga0207653_101365351	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LENVCNENNRSRLVGVQRAGVAVDSAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0207653_104199751	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RSRLVGVERAGVSVDTAVLSRYQGQYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK
Ga0207642_102621531	3300025899	Miscanthus Rhizosphere	VCNENNRSRLVGVQRAGVAVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0207643_101383421	3300025908	Miscanthus Rhizosphere	LPVSYRADTDMLENVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0207681_108606841	3300025923	Switchgrass Rhizosphere	LEYQITFDDPEVLTKPLTLSLPVRYQADADMLENVCSENSRSRLVGVQRAGVPVDTAVLARYQGQYAFSGGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGAVAQFFVDASGAVTHLVLGQTEGEAVYLPASR
Ga0207650_102880761	3300025925	Switchgrass Rhizosphere	SRLGGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDAKGTVTRLVLGQTEGEAIYTPAPRAR
Ga0207659_100587141	3300025926	Miscanthus Rhizosphere	TLSLPVSYQADTDMLENVCNENNRSRLVGVQRAAVAVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0207701_103821833	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LPVSYRADTDMLENVCNENNRSRLVGIERAGVSVDTAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLDALPLIPLSATMFESTGAIAQFFLDANGTVTRLVLGQTEGEAVYTPVCCATNNRNPRK
Ga0207669_103945741	3300025937	Miscanthus Rhizosphere	ADTDMLENVCNENNRSRLVGVQRAAVAVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0207691_114527621	3300025940	Miscanthus Rhizosphere	ENSRSRLVGVQRAGVKVDAAVLGRYEGQYAFSGGSRTVAGFMGMNHKVTFVNGRLYLNALPLIPLSPTMFESTGAVAEFHVDASGAVTRLVLGQTEGEAVYLPGNRDRK
Ga0207711_120027371	3300025941	Switchgrass Rhizosphere	ENNRSRLVGVERAGVSVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK
Ga0207668_111056122	3300025972	Switchgrass Rhizosphere	VCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTMFESTGAIAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0207677_101935003	3300026023	Miscanthus Rhizosphere	SVPVNYQADTDMLENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK
Ga0210002_10161661	3300027617	Arabidopsis Thaliana Rhizosphere	NENNRSRLVGVQRAGVAVDTAVLARYEGQYVFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0268265_103120251	3300028380	Switchgrass Rhizosphere	ENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATERDPRK
Ga0307408_1008603331	3300031548	Rhizosphere	TLSLPVTYRADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKITLVNGRLYLNALPLIPLSPTMFESTGAIATFFLDASGSVTRLVLAQTEGEAVYTPRK
Ga0310886_108797661	3300031562	Soil	TDMLENVCNENNRSRLVGAERAGVSVDAALLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDAKGTVTRLVLGQTEGEAIYTPAPRAR
Ga0310904_100495493	3300031854	Soil	RPLSLSLPVNYQADTDMLENVCSENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK
Ga0310904_110251732	3300031854	Soil	SLPVGYRADTDMLENVCNENNRSRLVGAERAGVSVDMAVLARYEGQYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFFLDASGTVTRLILGQTEGEAVYTPVCCATNRNLRK
Ga0310892_100814931	3300031858	Soil	LPVSYRADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0310893_101088451	3300031892	Soil	NENNRSRLVGAERTGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNGRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAVYTPVPRAR
Ga0310900_107687841	3300031908	Soil	VGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0310891_102054611	3300031913	Soil	SLSLPVNYQADTDMLENVCNENNRSRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAQFSLDASGTVTRLVLGQTEGEAVYTPVCCATDRDPRK
Ga0310901_103547241	3300031940	Soil	RLVGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0307416_1038926142	3300032002	Rhizosphere	YQADTDMLENVCNENNRSRLVGVQRAGVAVDTAVLARYEGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSQTRFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0310902_102271061	3300032012	Soil	ENVCNENNRSRLVGVQRAAVAVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0310906_104805801	3300032013	Soil	RLVGVQRAGVAVDTAILARYQGQYAFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLTPTLFESSGATAEFFLDAGGSVTRLVLGQTEGEAVYTPRK
Ga0310906_111653981	3300032013	Soil	SYRADTDMLENVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0310899_101662022	3300032017	Soil	VGVQRAGVAVDTAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTTFESTGAIATFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0310890_100332903	3300032075	Soil	RSRLVGVQRAAVAVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0310890_102203232	3300032075	Soil	NVCNENNRSRLVGVQQAGVAVDTAVLARYQGQYVFSAGSRIVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK
Ga0315912_102680042	3300032157	Soil	LPVSYRADTDMLENVCNENNRSRLVGVERAAVAVDAAVLARYEGQYAFSTGSRTVAGFMGMSHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFFLDASGAVTRLVLGQTEGEAVYTPVRKRQ
Ga0310889_102279072	3300032179	Soil	RSRLVGAERAGVSVDMAVLARYEGQYAFSAGSRTVAGFMGMNHTVTLVDGRLYLNALPLIPLSATMFESTGAIAQFFLDASGTVTRLVLGQTEGEAVYTPVCCATNRNLRK
Ga0310889_105554052	3300032179	Soil	LSLPVSYRADTDMLENVCNENNRSRLVGAERAGVSVDAAVLARYEGKYAFSAGSRTVAGFMGMNHTVTLVNDRLYLDALPLIPLSATMFESTGAIAEFFLDANGTVTRLVLGQTEGEAIYTPAPRAR
Ga0310812_101267601	3300032421	Soil	SRLVGVERAGVSVDTAVLSRYQGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSATMFESTGAIAEFSLDAKGTVTRLVLGQTEGEAIYTPAPRAR
Ga0247829_106840411	3300033550	Soil	RSRLVGVQRAGVAVDTAVLARYEGRYAFSAGSRTVAGFMGMNHTVTLVNGRLYLNALPLIPLSPTTFESTGAIAEFFLDASGSVTRLALGQTEGEAVYTPRK
Ga0364929_0159362_399_713	3300034149	Sediment	VGVERAGLPLDAAVLARYEGRYAFSDGSRIVAGFMGMNHNVTLVDGRLYLNALPLIPLSATKFESTGAIAEFFLDASGSVTRLVLGQAEGEAGYTRVSNGNPRK
Ga0314780_198726_131_520	3300034659	Soil	TKPLTFSLPVNYQADTDMLENVCNENNRSRLVGVQRAGVAVETAVLARYQGQYAFSAGSRTVAGFMGMNHKVTLVNGRLYLNALPLIPLSPTLFESTGATAEFFLDASGSVTRLVLGQTEGEAVYTPRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100595

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences