NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F100581

Metagenome / Metatranscriptome Family F100581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100581
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 52 residues
Representative Sequence LKRELAAAIAIPIVLAVLFLAPPVAFKLLVAAVALGALWEFYRLAEKT
Number of Associated Samples 97
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.86 %
% of genes near scaffold ends (potentially truncated) 99.02 %
% of genes from short scaffolds (< 2000 bps) 93.14 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.157 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(8.823 % of family members)
Environment Ontology (ENVO) Unclassified
(30.392 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.020 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.89%    β-sheet: 0.00%    Coil/Unstructured: 42.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01255Prenyltransf 89.22
PF01416PseudoU_synth_1 5.88
PF02163Peptidase_M50 0.98
PF03764EFG_IV 0.98
PF01148CTP_transf_1 0.98
PF02245Pur_DNA_glyco 0.98
PF00403HMA 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 89.22
COG0101tRNA U38,U39,U40 pseudouridine synthase TruATranslation, ribosomal structure and biogenesis [J] 5.88
COG0480Translation elongation factor EF-G, a GTPaseTranslation, ribosomal structure and biogenesis [J] 0.98
COG20943-methyladenine DNA glycosylase MpgReplication, recombination and repair [L] 0.98
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.98
COG2608Copper chaperone CopZInorganic ion transport and metabolism [P] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.16 %
UnclassifiedrootN/A7.84 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003502|JGI26143J51219_1001554All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300003503|JGI26141J51220_1000996All Organisms → cellular organisms → Bacteria1662Open in IMG/M
3300004013|Ga0055465_10021860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1481Open in IMG/M
3300004156|Ga0062589_101057277All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300004463|Ga0063356_102652458All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300005093|Ga0062594_102412264All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005332|Ga0066388_103560859All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005353|Ga0070669_100850750All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005363|Ga0008090_15370309All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005364|Ga0070673_100202879All Organisms → cellular organisms → Bacteria1708Open in IMG/M
3300005440|Ga0070705_101842511All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005444|Ga0070694_101129302All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005446|Ga0066686_10895976All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300005468|Ga0070707_100355698All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300005471|Ga0070698_101188828All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005518|Ga0070699_100147156All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300005518|Ga0070699_101590999All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005536|Ga0070697_101794391All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005543|Ga0070672_100130937All Organisms → cellular organisms → Bacteria2061Open in IMG/M
3300005549|Ga0070704_100047787All Organisms → cellular organisms → Bacteria2993Open in IMG/M
3300005549|Ga0070704_101317988All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005563|Ga0068855_101650798All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005764|Ga0066903_104177858All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300005843|Ga0068860_102389209All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005843|Ga0068860_102665950All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005993|Ga0080027_10317425All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006034|Ga0066656_10245698All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300006852|Ga0075433_10027796All Organisms → cellular organisms → Bacteria → Proteobacteria4802Open in IMG/M
3300006852|Ga0075433_10443745All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300007004|Ga0079218_10334929All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300007076|Ga0075435_100355440All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300009038|Ga0099829_10485694All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300009089|Ga0099828_10652208Not Available946Open in IMG/M
3300009090|Ga0099827_10986401All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300009098|Ga0105245_11876856All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300009162|Ga0075423_12359515All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300010046|Ga0126384_10862103All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300010360|Ga0126372_11996725All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300010361|Ga0126378_11878320All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300010397|Ga0134124_11685254All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300010400|Ga0134122_12428352All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300010401|Ga0134121_10327598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1364Open in IMG/M
3300012206|Ga0137380_11038230All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300012211|Ga0137377_11355290All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012350|Ga0137372_10256031All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300012353|Ga0137367_10311672All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300012491|Ga0157329_1026484All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012513|Ga0157326_1036386All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012961|Ga0164302_10282938All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300012971|Ga0126369_13244487All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300013308|Ga0157375_10316212All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300013503|Ga0120127_10149574All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300014326|Ga0157380_10177684All Organisms → cellular organisms → Bacteria1867Open in IMG/M
3300014969|Ga0157376_10822320All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300014969|Ga0157376_12838244All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300015371|Ga0132258_10558821All Organisms → cellular organisms → Bacteria2869Open in IMG/M
3300017944|Ga0187786_10424493All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300017947|Ga0187785_10241260All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → unclassified Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter sp. MAG AM2806Open in IMG/M
3300017997|Ga0184610_1046170All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300018029|Ga0187787_10465280Not Available512Open in IMG/M
3300018058|Ga0187766_11027397All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300018064|Ga0187773_10143677All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300018071|Ga0184618_10383171All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300019249|Ga0184648_1143786All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300019362|Ga0173479_10132193All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300021432|Ga0210384_10269216All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300021560|Ga0126371_12624686Not Available610Open in IMG/M
3300022534|Ga0224452_1239487All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium556Open in IMG/M
3300025899|Ga0207642_10211444All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300025933|Ga0207706_10438373All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300025935|Ga0207709_11657364Not Available531Open in IMG/M
3300025940|Ga0207691_10036613All Organisms → cellular organisms → Bacteria4547Open in IMG/M
3300025961|Ga0207712_11309204All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300025972|Ga0207668_11553480All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300025981|Ga0207640_11507127Not Available604Open in IMG/M
3300026023|Ga0207677_11453309All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300026142|Ga0207698_12183724All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300026272|Ga0209913_1093682Not Available636Open in IMG/M
3300026291|Ga0209890_10173767All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → unclassified Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter sp. MAG AM2704Open in IMG/M
3300026331|Ga0209267_1278389Not Available563Open in IMG/M
3300026542|Ga0209805_1170807All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300027846|Ga0209180_10472685All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300027862|Ga0209701_10608281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300027873|Ga0209814_10555825All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300027874|Ga0209465_10416335All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300027886|Ga0209486_10525318All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300027907|Ga0207428_10920830All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300028809|Ga0247824_10971601All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300030336|Ga0247826_10380054All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300030620|Ga0302046_10091482All Organisms → cellular organisms → Bacteria2476Open in IMG/M
3300031549|Ga0318571_10448470All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300031640|Ga0318555_10388799All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300031943|Ga0310885_10463530All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300032180|Ga0307471_101640241All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300032205|Ga0307472_100708184All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300032256|Ga0315271_10808114All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300032261|Ga0306920_101624176All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300032770|Ga0335085_12113345All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300032828|Ga0335080_12110027Not Available543Open in IMG/M
3300033433|Ga0326726_11952897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300034123|Ga0370479_0123360All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300034178|Ga0364934_0255136All Organisms → cellular organisms → Bacteria664Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.94%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.98%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.98%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.98%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.98%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.98%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.98%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.98%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.98%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.98%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003502Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PMHost-AssociatedOpen in IMG/M
3300003503Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AMHost-AssociatedOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012513Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510Host-AssociatedOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026272Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034123Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26143J51219_100155413300003502Arabidopsis Thaliana RhizosphereLTIGRRELAAAISIPIVFAVLFYTPPLAFNLLVAVVALGALWEFYRLAEKTG
JGI26141J51220_100099633300003503Arabidopsis Thaliana RhizosphereLTIGRRELAAAISIPIVFAVLFYTPPLAFNLLVAVVALGALWEFYRLAEKTGLPVAKTVGIVAGA
Ga0055465_1002186033300004013Natural And Restored WetlandsVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRIAEK
Ga0062589_10105727713300004156SoilLKRELAAAIAIPIVMAVLFLLPPPAFNLLVAAVALAALWEFYRLAEKTGLPVAKTVGMIF
Ga0063356_10265245823300004463Arabidopsis Thaliana RhizosphereLTIGRRELAAAISIPIVFAVLFYTPPLAFNLLVAVVALGALWEFYRLAEKTGLPVAKTVG
Ga0062594_10241226423300005093SoilMKRELAAAVAIPLVLAALFLAPPIVFNALVAALTLCAVWEFYRLAERTGHPV
Ga0066388_10356085913300005332Tropical Forest SoilLALKRELAAAVAIPVVFAILFFAPPVAFHLVAAAIALAALWEFYRLAEKTGLPPAKTVGL
Ga0070669_10085075013300005353Switchgrass RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNVLVAVLTLGAVWEFYRIAERT
Ga0008090_1537030913300005363Tropical Rainforest SoilVALKREAAAAVAIPVVLAILFLTPPVFFHLLVAVITLGALWEFYRIAEKS
Ga0070673_10020287933300005364Switchgrass RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNVLVAVLTLGAVWEFYRI
Ga0070705_10184251123300005440Corn, Switchgrass And Miscanthus RhizosphereVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRIA
Ga0070694_10112930223300005444Corn, Switchgrass And Miscanthus RhizosphereLALKRELAAAVAIPVVLAILFFAPPVVFDALVGAIALAALWEFYRI
Ga0066686_1089597623300005446SoilMTIPYKREIAAAVAIPIVLAILFCLPPAAFDALAALVSLAALWEFYRIAEKSGHPVVKTVGMAAA
Ga0070707_10035569813300005468Corn, Switchgrass And Miscanthus RhizosphereVGPRELAAAVAIPIVLAVLFFLPPLAFNLLVAAVALAALWE
Ga0070698_10118882823300005471Corn, Switchgrass And Miscanthus RhizosphereVALKRELAAAIAIPIVLAILFFAPPVVFDALVGAIALAALWEFYRIAEKT
Ga0070699_10014715643300005518Corn, Switchgrass And Miscanthus RhizosphereLGHQRELAAAVAIPIVLAALFLAPPIIFNVLVAVVALCAVWEFYRLAEKTGHPVSKTL
Ga0070699_10159099923300005518Corn, Switchgrass And Miscanthus RhizosphereVALKREAAAAVAIPVVLAVLFYTPPIFFDLLVALVSLGALWEFYRIAEKT
Ga0070697_10179439113300005536Corn, Switchgrass And Miscanthus RhizosphereVTTGLRREVAAAIAIPIVLAILFLLPAVAFDLLVAVIALGALWEFYRLAEK
Ga0070672_10013093713300005543Miscanthus RhizosphereLALKRELAAAIAIPIVFAVLFLAPAVAFNGLVAAVALG
Ga0070704_10004778713300005549Corn, Switchgrass And Miscanthus RhizosphereVALKRELAAAVAIPIVLAILFAGPALLFNLLVAVVALCALWE
Ga0070704_10131798823300005549Corn, Switchgrass And Miscanthus RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFDILVAVLTLGAVWEFYRIAERTG
Ga0068855_10165079823300005563Corn RhizosphereVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRIAEKTGHPVAKTVGLAG
Ga0066903_10417785823300005764Tropical Forest SoilVKRELAAAVAIPIVLAILFLAPPIAFHLLVAAVALAALW
Ga0068860_10238920923300005843Switchgrass RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNVLVAVLTLGAVWEFYRIAERTGHPVAKTV
Ga0068860_10266595023300005843Switchgrass RhizosphereLALKRELAAAIAIPIVFAVLFLAPPVAFDLLVAAIALAALWEFYRLAEKTGLPVAKTVGMVFG
Ga0080027_1031742513300005993Prmafrost SoilVALKREIAAAVAIPVVLGILFFLPSIAFDLLVAAIGLAALWEFYRLAEKTGHPVAKSVGIAAGALVLLAAAF
Ga0066656_1024569813300006034SoilMTIPYKREIAAAVAIPIVLAILFWLPPAAFDALAALVSLAALWEFYRIAEKSGHPVVKTVGMAA
Ga0075433_1002779653300006852Populus RhizosphereMTLARRELAAAIAIPIVMAVLFLAPPLAFNLLVDAVTLA
Ga0075433_1044374513300006852Populus RhizosphereVGPRELAAAVAIPIVLAVLFFLPPLAFNLLVAAVALAALWEFYRLAERTGLP
Ga0079218_1033492913300007004Agricultural SoilVKRELAAAVAIPIVLAVLFLAPPIVFNVLVGAVALAALWEFYRIAEKTGLPVAKTVGLAGGLAA
Ga0075435_10035544023300007076Populus RhizosphereVKRELAAAVAIPVVLAILFLTPPIFFHFLVAAVGLAALWEFYRLAEKTGHPVAKTVGMASGAL
Ga0099829_1048569413300009038Vadose Zone SoilVGPRELAAAVAIPIVLAVLFFLPPLAFNLLVTAVALPALWEFYRLAEKAGFPVAKTVGMF
Ga0099828_1065220823300009089Vadose Zone SoilMTTPFKREIAAAVTIPIVLAILFGLPPPAFDALAALAALAALWEFYRIAEKSGHPVVKTVGMAAGAL
Ga0099827_1098640113300009090Vadose Zone SoilVALKRELAAAVAIPIVLALLFFTPPVVFNLLVAAIALCALWEFYRLAEKTGHPVAKTVGLAAAA
Ga0105245_1187685623300009098Miscanthus RhizosphereVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRIAEKTGHPVAKTVG
Ga0075423_1235951513300009162Populus RhizosphereMTVSRREPAAAIAIPIVLAVLFLAPPIAFNLLVAA
Ga0126384_1086210313300010046Tropical Forest SoilLAGKREEAAAVAIPAVLAVLFFTPPVFFYLLIAVITLGALWEFYR
Ga0126372_1199672513300010360Tropical Forest SoilMKREIAAAVAIPAVLAILFFTPPLVFHLLLDLVTLGALWEFYRMAEKTGHPVAKT
Ga0126378_1187832023300010361Tropical Forest SoilLAVGTRELAAAVAIPIVLAALFLAPAIVFNALVGFVALAALWEFYRMAEKAGHPVAK
Ga0134124_1168525413300010397Terrestrial SoilMKRELAAAVAIPLVLAALFLAPPIVFNALVAALTLCAVWEFYRLAERTGHPVAKTIGLAS
Ga0134122_1242835213300010400Terrestrial SoilLALKRELAAAVAIPVVLAILFWLPPYVFDVLVAAIALAALWEFYRIAE
Ga0134121_1032759823300010401Terrestrial SoilVALKRELAAAVAIPIVLAILFAGPPLLFNLLVAVVALCALWEFYRMA*
Ga0137380_1103823013300012206Vadose Zone SoilMTVGRRELAAAVAIPIVLSVLFFLPPLAFNLLVAAVTLAALWEFYRLAEKAGL
Ga0137377_1135529023300012211Vadose Zone SoilVGPRELAAAVAIPIVLAVLFFLPPLAFNLLVAAVALAALWEFYRLA
Ga0137372_1025603113300012350Vadose Zone SoilLKREAAAAVAIPIVLAILFFTPPVVFDLLVAAVALAALW
Ga0137367_1031167223300012353Vadose Zone SoilMTFGRRELAAAVAIPIVLAILFFLPPLAFNRLVAAVTLAALWEFYRLAEKSGLPVAKTVGMVFG
Ga0157329_102648413300012491Arabidopsis RhizosphereLALKRELAAAVAIPIVLAILFLLPPIAFDLLVVAIGLATLWEFFRIAE
Ga0157326_103638623300012513Arabidopsis RhizosphereLALKRELAAAIAIPIVFAVLFLAPPVAFDLLVAAIALAALWEFYRLAEKTGL
Ga0164302_1028293823300012961SoilLALKREPAAAIAIPIVFAVLFLAPPVAFDLLVAAIALAALWEFYRLAEKTGLPV
Ga0126369_1324448713300012971Tropical Forest SoilLARLQRELAAGIAIPLVLGVLYFAPPIAFDLLVAAVTLAALYEFLRL
Ga0157375_1031621233300013308Miscanthus RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNALVAALTLCAVWEFYRLAERTGHPVAKTIGLASSALLLGGA
Ga0120127_1014957423300013503PermafrostLKRELAAAIAIPIVLAVLFFAPPLGFNLLVAAVALAALWEVYRLRA
Ga0157380_1017768413300014326Switchgrass RhizosphereLALKRELAAAIAIPIVFAVLFLAPAVAFNGLVAAVALGALWEFYRLAEKTGLPVAKTVGMVFGV
Ga0157376_1082232023300014969Miscanthus RhizosphereVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRIAEKTGHPVAKTVGLAGSALL
Ga0157376_1283824413300014969Miscanthus RhizosphereMKRELAAAVAIPIVLAALFKAPPIVFNLLVAFIALGALWEFY
Ga0132258_1055882113300015371Arabidopsis RhizosphereLALKRELAAAVAIPIVLAILFLLPPIAFDLLVAAIALATLWEFFRIAEKTGLPVAKTVGLASGLAVLLSI
Ga0187786_1042449323300017944Tropical PeatlandLTLTRELAAGIAIPIVLGVLFGLPAVAFDLLVAAVALA
Ga0187785_1024126013300017947Tropical PeatlandLALQRELAAGIAIPLVLGILFFAPPIAFNLLVAAVTLAALYEFLRLAERIGHP
Ga0184610_104617013300017997Groundwater SedimentLKRELAAAVAIPIVFAVLFIAPPLAFDVLVAAVALAALWEFYRLAEKTGMPVAKAVGLVFGAAI
Ga0187787_1046528023300018029Tropical PeatlandVALKRELAAAVAIPIVLGILFFTPPIVFDALVAGVALATLWEFYRLAEKTGHPVAKTVGLLAGLAGL
Ga0187766_1102739723300018058Tropical PeatlandVAVGTRELSAAVAIPIVLAALFLAPAIVFNALVAFVALAALWEFYRLAEKAGHPVA
Ga0187773_1014367733300018064Tropical PeatlandLTLKRELAAGIAIPIVLGVLFGLPAVAFDLLVAAVALAALFEFYRLAEKSGHAVSKTVGIGGG
Ga0184618_1038317123300018071Groundwater SedimentLKRELAAAIAIPIVLAVLFLAPPVAFKLLVAAVALGALWEFYRLAEKT
Ga0184648_114378623300019249Groundwater SedimentLKRELAAAIAIPIVLAVLFLAPALAFDLLVAAVALAALWEF
Ga0173479_1013219313300019362SoilMKRELAAAVAIPLVLAALFLAPPIVFNALVAALTLCAVWEFYRLAERTGHPVAKTIGLASSAL
Ga0210384_1026921633300021432SoilMKRELAAAVAIPLVLGILFLAPALAFNVLVAAIALAA
Ga0126371_1262468623300021560Tropical Forest SoilLALKRELAAAVAIPIVLAILFWPAAVVFNLLVAAVALATLWEFYRLAEKTALPVSKT
Ga0224452_123948723300022534Groundwater SedimentLKRELAAAIAIPIVMAVLFLAPPVAFDLLVAAVALAALWEFYR
Ga0207642_1021144423300025899Miscanthus RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNVLVAVLTLGAVWEFYRIAERTGHPVAKTVGVAA
Ga0207706_1043837323300025933Corn RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNVLVAVLTLGAVWEFYRIAERTGHPVAKTVGVAASALVLG
Ga0207709_1165736413300025935Miscanthus RhizosphereVALKRELAAAVAIPIVLAILFAGPALLFNLLVAVVALCALWEFY
Ga0207691_1003661353300025940Miscanthus RhizosphereLALKRELAAAIAIPIVFAVLFLAPAVAFNGLVAAVALGALWEFYRLAEKT
Ga0207712_1130920423300025961Switchgrass RhizosphereLALKRELAAAIAIPIVFAVLFLAPAVAFNGLVAAVALGALWEFYRLAEKTGLPVAKTVGV
Ga0207668_1155348013300025972Switchgrass RhizosphereLALKRELAAAIAIPIVFAVLFLAPPVAFDLLVAAIALAALWEFYRLAEKTG
Ga0207640_1150712723300025981Corn RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFDVLVAVLTLGAVWEFYRIAERTGHPVAKTVGVAASALV
Ga0207677_1145330923300026023Miscanthus RhizosphereMKRELAAAVAIPLVLAALFLAPPIVFNALVAALTLCAVWEFYRL
Ga0207698_1218372423300026142Corn RhizosphereLALKRELAAAIAIPIVFAVLFLAPAVAFNGLVAAVALGALW
Ga0209913_109368223300026272SoilVALKREIAAAVAIPIVLSILFFAPPVVFNALVAAVALAALWEFYRLA
Ga0209890_1017376723300026291SoilLAGKRELAAAVAIPIVFAVLFFAPAWAFNCLVVAVALGALWEFYKIAEKSGHPAAKT
Ga0209267_127838923300026331SoilVSVGRRELAAAVAIPIVLAVLFFLPSLAFNLLVAAVALAALWEFYRLAEKSGLPVAKTVGMV
Ga0209805_117080723300026542SoilVTVGPRELAAAVAIPIVLAVLFFLPSLAFNLLVAAVALAALWEFYRLAEKS
Ga0209180_1047268513300027846Vadose Zone SoilVALKRELAAAVAIPIVLAVLFFAPPIAFNLLVALVALAALWEFYRLAEKTGYPAA
Ga0209701_1060828113300027862Vadose Zone SoilLAFKREIAAAVTIPIILAILFGLPPAAFDALAALVSLAALWEFYRIAEKSRYPVVKTVGMAAGA
Ga0209814_1055582513300027873Populus RhizosphereVGPRELAAAVAIPIVLAVLFFLPPLAFNLLVAAVALAA
Ga0209465_1041633513300027874Tropical Forest SoilLRLGTRELAAAVAIPLVLAALFLAPPVVFNVLVAAVSLGALWEFYRMAE
Ga0209486_1052531823300027886Agricultural SoilMKRELAAAVAIPIVLAVLFFAPPVVFNALVAGIGLAALWEFYRIAEKTGLPVAKTVGIAGGA
Ga0207428_1092083013300027907Populus RhizosphereVKRELAGAVAIPIVLVILFRGPAILFNALVAVIALGAVWEFYRMAEKTGHPVAK
Ga0247824_1097160123300028809SoilVALGQRELAGAVAIPLVLAALFLAPPVVFNVLVALVALGALWEFYRIAEKT
Ga0247826_1038005413300030336SoilVALGQRELAGAVAIPLVLAALFLAPPVVFNVLVALVALGALWEF
Ga0302046_1009148213300030620SoilMRVGRRELAAAIAIPVVLAVLFLAPPLAFNLLVAAVALAALWEFYRLAEKIGLPVAK
Ga0318571_1044847023300031549SoilLALKRELAAAVAIPIVFAILFFAPAIVFHLVAAAIALTALWE
Ga0318555_1038879923300031640SoilLAVGTRELAAAVAIPIVLLALFRAPAIVFNALVGFVALAALWEFYRMAEKAGHAVAKTLGIVYGGLV
Ga0310885_1046353023300031943SoilVKRELAGAVAIPIVLVILFKGPAILFNALVAVIALGAVWEFYRMAEK
Ga0307471_10164024113300032180Hardwood Forest SoilLAGKRELAAAVAIPIVFAILFYAPSWAFHLVVTAV
Ga0307472_10070818413300032205Hardwood Forest SoilVKRELAAAVSIPVVLAILFFTPPIFFHALVAAVALAALWEFYTLAEKT
Ga0315271_1080811413300032256SedimentMKRELAAAVAIPIVLAALFKAPPIVFNVLVAFIALGALWEF
Ga0306920_10162417613300032261SoilLAVGTRELAAAVAIPIVLAALFLAPAIVFNALVGFVALAALWEFYRMAEKAG
Ga0335085_1211334523300032770SoilLALGTRELAAAVAIPIVLAVLFLGPPVAFNALVAVVGLGALWEFYR
Ga0335080_1211002723300032828SoilVPRDTKGRTRVAVGTRELAAAVAIPIVLAALFLAPAIVFNALVGFVALAALWEFYRMAEK
Ga0326726_1195289723300033433Peat SoilLALKREAAAAVAIPIVLAILFLTPPLIFDLLVAAIALAALWEFYRLAEKTGHPVAKTVGMFA
Ga0370479_0123360_2_1393300034123Untreated Peat SoilVKRELAAAVAIPIVLAVLFLGPPLLFNALVAVVALGAVWEFYRIAE
Ga0364934_0255136_3_1733300034178SedimentLKRELAAAIAIPIVLAVLFLAPALAFDLLVAAVALAALWEFYRLAEKTGIPVAKTVG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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