Metagenome Family F100557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100557
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	48 residues
Representative Sequence	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEAEAEPPPDR
Number of Associated Samples	83
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.69 %
% of genes near scaffold ends (potentially truncated)	45.10 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.392 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (55.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.05% β-sheet: 0.00% Coil/Unstructured: 51.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.7.12.1: PhoU-like	d1vcta1	1vct	0.85161
a.25.1.0: automated matches	d5hjfa_	5hjf	0.85116
e.32.1.1: Phase 1 flagellin	d1io1a_	1io1	0.84577
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.84394
a.25.1.0: automated matches	d2c41a_	2c41	0.83464

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01555	N6_N4_Mtase	49.02
PF11994	DUF3489	25.49
PF02195	ParBc	5.88
PF05876	GpA_ATPase	1.96
PF00436	SSB	0.98
PF02782	FGGY_C	0.98
PF13730	HTH_36	0.98
PF07728	AAA_5	0.98
PF00589	Phage_integrase	0.98
PF01844	HNH	0.98
PF06983	3-dmu-9_3-mt	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	49.02
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	49.02
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	49.02
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	1.96
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.98
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.98
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.98
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.39 %
Unclassified	root	N/A	19.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.39 %
Unclassified	root	N/A	19.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.39 %
Unclassified	root	N/A	19.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.55 %
Unclassified	root	N/A	19.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.98 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.98 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.98 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.98 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.98 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.98 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.98 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.98 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.98 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.61 %
Rhodopirellula europaea 6C	strain	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea → Rhodopirellula europaea 6C	0.98 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.98 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005445\|Ga0070708_100668197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300005467\|Ga0070706_101669043	Not Available	581	Open in IMG/M
3300005468\|Ga0070707_101484276	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300006854\|Ga0075425_101732201	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300009038\|Ga0099829_10819072	Not Available	773	Open in IMG/M
3300009088\|Ga0099830_10645236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300009093\|Ga0105240_10648720	Not Available	1157	Open in IMG/M
3300009519\|Ga0116108_1023475	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300009547\|Ga0116136_1172504	Not Available	544	Open in IMG/M
3300009616\|Ga0116111_1020777	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea → Rhodopirellula europaea 6C	2300	Open in IMG/M
3300009623\|Ga0116133_1111779	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009629\|Ga0116119_1186498	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009630\|Ga0116114_1133412	Not Available	642	Open in IMG/M
3300009630\|Ga0116114_1147267	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009632\|Ga0116102_1108468	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009641\|Ga0116120_1031968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	1867	Open in IMG/M
3300009643\|Ga0116110_1194692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300009665\|Ga0116135_1453642	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009824\|Ga0116219_10564076	Not Available	627	Open in IMG/M
3300010361\|Ga0126378_11842397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	688	Open in IMG/M
3300010379\|Ga0136449_102558463	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300011444\|Ga0137463_1132226	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300012189\|Ga0137388_11144731	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300012210\|Ga0137378_11422879	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012923\|Ga0137359_10033989	All Organisms → cellular organisms → Bacteria → Proteobacteria	4390	Open in IMG/M
3300012930\|Ga0137407_12296530	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300014151\|Ga0181539_1184389	Not Available	811	Open in IMG/M
3300014152\|Ga0181533_1186195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300014153\|Ga0181527_1343116	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300014156\|Ga0181518_10363180	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300014158\|Ga0181521_10431893	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300014159\|Ga0181530_10000629	All Organisms → cellular organisms → Bacteria	45362	Open in IMG/M
3300014159\|Ga0181530_10009478	All Organisms → cellular organisms → Bacteria	8756	Open in IMG/M
3300014160\|Ga0181517_10391375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300014161\|Ga0181529_10408445	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300014161\|Ga0181529_10629412	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300014161\|Ga0181529_10633366	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300014164\|Ga0181532_10248585	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300014167\|Ga0181528_10489515	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	675	Open in IMG/M
3300014201\|Ga0181537_10503941	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300014491\|Ga0182014_10014687	All Organisms → cellular organisms → Bacteria → Acidobacteria	7204	Open in IMG/M
3300014492\|Ga0182013_10399236	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300014498\|Ga0182019_11061172	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300014638\|Ga0181536_10429886	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300014838\|Ga0182030_10112587	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300014838\|Ga0182030_10707113	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300014839\|Ga0182027_10598808	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300014839\|Ga0182027_10873783	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300014839\|Ga0182027_12070802	Not Available	543	Open in IMG/M
3300014882\|Ga0180069_1002060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4178	Open in IMG/M
3300017931\|Ga0187877_1125625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300017935\|Ga0187848_10229702	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300017935\|Ga0187848_10348753	Not Available	613	Open in IMG/M
3300017946\|Ga0187879_10580330	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017946\|Ga0187879_10843092	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300017948\|Ga0187847_10903733	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300017988\|Ga0181520_10790166	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300017988\|Ga0181520_10945614	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300017996\|Ga0187891_1000175	All Organisms → cellular organisms → Bacteria	67781	Open in IMG/M
3300018009\|Ga0187884_10269159	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300018009\|Ga0187884_10421868	Not Available	536	Open in IMG/M
3300018014\|Ga0187860_1155097	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300018015\|Ga0187866_1229007	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300018022\|Ga0187864_10063680	All Organisms → cellular organisms → Bacteria → Proteobacteria	2018	Open in IMG/M
3300018022\|Ga0187864_10511262	Not Available	501	Open in IMG/M
3300018024\|Ga0187881_10263457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	720	Open in IMG/M
3300018030\|Ga0187869_10501522	Not Available	576	Open in IMG/M
3300018034\|Ga0187863_10058944	Not Available	2183	Open in IMG/M
3300018035\|Ga0187875_10483029	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018038\|Ga0187855_10543164	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300018040\|Ga0187862_10579270	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300018057\|Ga0187858_10594533	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300018086\|Ga0187769_10843163	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300018089\|Ga0187774_10646433	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300019082\|Ga0187852_1436614	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300019361\|Ga0173482_10632087	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300020200\|Ga0194121_10275113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	868	Open in IMG/M
3300025858\|Ga0209099_1016614	All Organisms → cellular organisms → Bacteria → Proteobacteria	4336	Open in IMG/M
3300025922\|Ga0207646_10187820	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300025922\|Ga0207646_10721927	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300027703\|Ga0207862_1147707	Not Available	703	Open in IMG/M
3300027854\|Ga0209517_10086796	All Organisms → cellular organisms → Bacteria → Proteobacteria	2152	Open in IMG/M
3300029943\|Ga0311340_11318973	Not Available	574	Open in IMG/M
3300029944\|Ga0311352_10586774	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300031708\|Ga0310686_107065777	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	820	Open in IMG/M
3300031720\|Ga0307469_11596669	Not Available	627	Open in IMG/M
3300031730\|Ga0307516_10740238	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032421\|Ga0310812_10086944	Not Available	1268	Open in IMG/M
3300032770\|Ga0335085_10341532	Not Available	1758	Open in IMG/M
3300032770\|Ga0335085_10344672	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300032770\|Ga0335085_10593074	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032805\|Ga0335078_10318349	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300032805\|Ga0335078_11183921	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300032805\|Ga0335078_11311766	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300032828\|Ga0335080_10267900	Not Available	1862	Open in IMG/M
3300032893\|Ga0335069_11511332	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300032954\|Ga0335083_10756293	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300033402\|Ga0326728_10002356	All Organisms → cellular organisms → Bacteria	63326	Open in IMG/M
3300033402\|Ga0326728_10049897	All Organisms → cellular organisms → Bacteria → Proteobacteria	6143	Open in IMG/M
3300033402\|Ga0326728_10618436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	838	Open in IMG/M
3300033977\|Ga0314861_0152089	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	2.94%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.98%
Terrestrial	Environmental → Terrestrial	45.10%
Plants	Host-Associated → Plants	2.94%
Wastewater	Engineered → Wastewater	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.02%
Soil	Environmental → Terrestrial → Soil	40.20%
Peat	Environmental → Terrestrial → Peat	4.90%
Sediment	Environmental → Aquatic → Sediment	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Roots	Host-Associated → Plants → Roots	0.98%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	48.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.73%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.98%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	37.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	20.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	16.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300025858	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070708_1006681972	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSREHEIMRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAEPPPDR*
Ga0070706_1016690431	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CEVDRCRAEIADIQALLLAGHPDIEGLCLALSDWSAELRILEGAEAEPPPDR*
Ga0070707_1014842762	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VDRCRAEIADIEALLLAGHPDIEGLCLALSDWSAELRILEGAEAEPPPDR*
Ga0075425_1017322012	3300006854	Populus Rhizosphere	LDRCRAEIADIEALLLAGHPDIEGLCLALSDWSAELRVLEGAEAEPPPDR*
Ga0099829_108190722	3300009038	Vadose Zone Soil	MAIERCRAEIAEIEALILAGHPDVQGLCQALADWSAELRLLESGLRR*
Ga0099830_106452362	3300009088	Vadose Zone Soil	VDRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAGPPPDR*
Ga0105240_106487203	3300009093	Corn Rhizosphere	VDRCHAEIASVEALLRAAHPDVEGLCMALADWSAELRILEAEAEPPPER*
Ga0116108_10234751	3300009519	Peatland	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAESSPPG
Ga0116136_11725041	3300009547	Peatland	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAESSPPGRGIRRFG*
Ga0116111_10207772	3300009616	Peatland	VDRCRAEIAATESLLLAGHLDVEGLCMTLADWSAELRILEAEAPPPGREIRQWEASTGGQARREG*
Ga0116133_11117791	3300009623	Peatland	LPQRDAQWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEAEAEPPPDR
Ga0116119_11864981	3300009629	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRILEAEAEP
Ga0116114_11334122	3300009630	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILKAEAEPPPDR*
Ga0116114_11472671	3300009630	Peatland	AQWQREVDRCRAEIAATEALLLAGHPDIEGLCMALADWSAELRILERVGDE*
Ga0116102_11084682	3300009632	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRFLEA
Ga0116120_10319681	3300009641	Peatland	VDRCRAEIAATESLLLAGHLDVEGLCMTLADWSAELRILEAEAPPPGREIRQWEAS
Ga0116110_11946922	3300009643	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRFLEAEAEPPPDR*
Ga0116135_14536422	3300009665	Peatland	VDRCRAEIATAEILLRAAHPDVEGLCMALADWSAE
Ga0116219_105640762	3300009824	Peatlands Soil	VDRCRAEIATAEAWLLAGHTDVEGLCMALADWSAELRILEHEQR*
Ga0126378_118423971	3300010361	Tropical Forest Soil	MEKASVIPLQNDSQRLSEIGRCRTELAAIEALLLDGHPDVEGLCMALADWSAELRILLDA
Ga0136449_1025584632	3300010379	Peatlands Soil	VDRCRAEIANTEALLLAGHSDVEGLCIALADWSAELRILEREPR*
Ga0137463_11322262	3300011444	Soil	VDRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAEPPPDR*
Ga0137388_111447312	3300012189	Vadose Zone Soil	VDRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAEPPADR*
Ga0137378_114228791	3300012210	Vadose Zone Soil	VDRCSAEIAAIEALLLAGHPDVEGLCLELSDWSAELRILEG
Ga0137359_100339897	3300012923	Vadose Zone Soil	VDRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAGSPPDR*
Ga0137407_122965301	3300012930	Vadose Zone Soil	VDRCRAEIAAIEALLLAGHPDIEGLCMALSDWSAELRILEGAEAVPP
Ga0181539_11843892	3300014151	Bog	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDRDE*
Ga0181533_11861952	3300014152	Bog	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRFLEAEAEPPPDR*
Ga0181527_13431162	3300014153	Bog	VDRCRDEIAAAELLLLAGHPDVEGLCMALADWSAELRMLEAEAPPPGIYGSR*
Ga0181518_103631801	3300014156	Bog	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILER
Ga0181521_104318932	3300014158	Bog	VERCHAEIATAETLLRAGHPDVDGLCMALADWSAELRILEAEAEPPPDR*
Ga0181530_100006292	3300014159	Bog	VDRCRAEIAAAEALLRAGHPDVEGLCMALADWSAELRILERGRDE*
Ga0181530_1000947811	3300014159	Bog	LQSEKERCRQELVAIEAELHAGSPDVEGLCQALQDWSAELRILEGLSLEP*
Ga0181517_103913752	3300014160	Bog	LPEREAQWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRILEAEAEPPPDR
Ga0181529_104084452	3300014161	Bog	VERCHAEIATAEALLRAGHPDDEGLCMALADWSAELRILERDRDE*
Ga0181529_106294122	3300014161	Bog	VDRCRDEIAAAELLLLAGHPDVEGLCMALADWSAELRILEAESQPPGRGIRQWE
Ga0181529_106333662	3300014161	Bog	LPEREAQWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRFLEAEAEPPPDR
Ga0181532_102485852	3300014164	Bog	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAESSPPGRGIR*
Ga0181528_104895151	3300014167	Bog	MEQWQREVARCRGEIAEVEALLIAGHPDVEGLCMALSDWSAELRIIERDVGSG*
Ga0181537_105039411	3300014201	Bog	AEIGTAETLLRAGHPDLDGLCMALADWSAELRILAAEAEPPPDR*
Ga0182014_1001468712	3300014491	Bog	VRCRQEIAAIKSQLLAGHPDIEGLCLGLRDWSWELRRLQAAQQRHPPFK*
Ga0182013_103992361	3300014492	Bog	VDRCRAEIAAAKSLLLAVHPEVEGLCMALADWSAELRILEEEAPPQWDASTVA*
Ga0182019_110611722	3300014498	Fen	DEIAAAELLLLAGHPDVEGLCMALADWSAELRMLEAEAPPPGIYGSR*
Ga0182024_117953103	3300014501	Permafrost	MEVCLREIAAIEKQLRAGHPDVHGLCLALADWSAELRILEIERKK
Ga0181536_104298863	3300014638	Bog	QWQREVDRCRAEIAAAEALLRAGHPDVEGLCMALADWSAELRILERGRDE*
Ga0182030_101125872	3300014838	Bog	MEQWRREVDRCRAEIAEAERLLLAGHPDVEGLCMALSDWSAELRILEAEPPPDR*
Ga0182030_107071132	3300014838	Bog	VDRCRAEIAAAKSLLLAGHPDVEGLCMALADWSAELRILEAEAPPQWDASTVA*
Ga0182027_105988083	3300014839	Fen	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAGSSPPVRGIRQWEALTGGGATDR*
Ga0182027_108737833	3300014839	Fen	VDCCHAEIAATEALLLAGHPDVEGLCMALADWSAELRFLEREPQ*
Ga0182027_120708021	3300014839	Fen	VDRCRDEIAAAELLLLAGHPDVEGLCMALADWSAELR
Ga0180069_10020604	3300014882	Soil	VDRCRAEIEAIEALLLAGHPDVEGLCLALSDWSAELRILAGAEAEPPPDC*
Ga0187877_11256253	3300017931	Peatland	VDRCRAEIAATEALLLAGHPDLEGLCMALADWSAEV
Ga0187848_102297021	3300017935	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAEL
Ga0187848_103487531	3300017935	Peatland	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAESSPPGRGIRRFG
Ga0187879_105803301	3300017946	Peatland	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAES
Ga0187879_108430923	3300017946	Peatland	EVDRCRAEIAAAEALLRAGHPDVEGLCMALADWSAELRILERGRDE
Ga0187847_109037332	3300017948	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDRDE
Ga0181520_107901662	3300017988	Bog	QWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEAEAEPPPDR
Ga0181520_109456141	3300017988	Bog	QRDAQWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDRDE
Ga0187891_100017545	3300017996	Peatland	VDRCRAEIAAAEALLRAGHPDVEGLCMALADWSAELRILERGRDE
Ga0187884_102691592	3300018009	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRFLEAEAEPPPDR
Ga0187884_104218682	3300018009	Peatland	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAESSPP
Ga0187860_11550971	3300018014	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEAEAEPPPDR
Ga0187866_12290072	3300018015	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEAEAEPPLDR
Ga0187864_100636803	3300018022	Peatland	VDRCRAEIAATESLLLAGHLDVEGLCMTLADWSAELRILEAEAPSPGREIR
Ga0187864_105112622	3300018022	Peatland	ADIAATEALLRAGHPDVEGLCLALADWSAELRILEAEPPPDR
Ga0187881_102634572	3300018024	Peatland	VDRCRAEIAATESLLLAGHLDVEGLCMTLADWSAELRILEAEAPPPGREIRQWEASTGGQARREG
Ga0187869_105015221	3300018030	Peatland	LLRAGHPDLQGLCRALVDWSAELRIREADAEPPPER
Ga0187863_100589445	3300018034	Peatland	CRQEIAAIKAQLLAGHPDIEGLCLALMDWSSELRLIEKARQRQPPPLQ
Ga0187875_104830291	3300018035	Peatland	VDRCCAEIATAEALLRAGHPDVEGLCMALADWSAELRILEAEAL
Ga0187855_105431641	3300018038	Peatland	QWQREVDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDRDE
Ga0187862_105792701	3300018040	Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSVELRI
Ga0187858_105945331	3300018057	Peatland	VDRCRAEIATAETLLRAGHPDVEGLCMALADWSAELRILEAEAEPPPDR
Ga0187769_108431632	3300018086	Tropical Peatland	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILEREQR
Ga0187774_106464331	3300018089	Tropical Peatland	VERCRAEIATAEALLRAGHPDVEGLCMALADWSAELRLL
Ga0187852_14366141	3300019082	Peatland	AQWQREVDRCRAEIAAAEALLRAGHPDVEGLCMALADWSAELRILERGRDE
Ga0173482_106320872	3300019361	Soil	VSQEHEIVRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAEPPPDR
Ga0194121_102751131	3300020200	Freshwater Lake	CRAEIAAIEALLLAGHPDIEGLCLALSDWSAELRILEGSGAERPPDR
Ga0209099_10166141	3300025858	Anaerobic Digestor Sludge	QWQREVDRCRAEIYEAERLLRAGHPDVEGLVLALADWSEELRMIAREKQEAAG
Ga0207646_101878205	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EAQWRCEVDRCRAEIADIEALLLAGHPDIEGLCLALSDWSAELRILEGAEAEPPPDR
Ga0207646_107219272	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRCRAEIAAIEALLLAGHPDVEGLCLALSDWSAELRILEGAEAEPPPDR
Ga0207862_11477071	3300027703	Tropical Forest Soil	CRRELAAAETELRAGNPDVEGLCLALMDWSAELRILERERRTPSREGMA
Ga0209517_100867962	3300027854	Peatlands Soil	VDRCRAEIATAEAWLLAGHTDVEGLCMALADWSAELRILEHEQR
Ga0311340_113189731	3300029943	Palsa	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAELRILEAKAPPQWDAFTVA
Ga0311352_105867741	3300029944	Palsa	VDRCRAEIAATESLLLAGHPDVEGLCMALADWSAE
Ga0310686_1070657771	3300031708	Soil	ARCRLEIAEIESLLLAGHPDVQGLCLALSDWSAELRLLQRDK
Ga0307469_115966691	3300031720	Hardwood Forest Soil	AEIAAIEALLHSGNPDVEGLCLALSDWSTERRILEGAEAGPPPDR
Ga0307516_107402382	3300031730	Ectomycorrhiza	VDRCRAEIAAIEALLLAGHPDIEGLCLALSDWSAELRILEGAETVPPPDR
Ga0310812_100869441	3300032421	Soil	MRCRLEIAAIETQIRAGHPDVDGLCLALADWSAELRLLLGRQ
Ga0335085_103415322	3300032770	Soil	VDRCRAEIAATEALLLAGHPDIEGLCMALADWSAELRILERDGDD
Ga0335085_103446722	3300032770	Soil	VDRCRAEIAATEALLLAGHPDIEGLCMALADWSAELRILERVGDE
Ga0335085_105930742	3300032770	Soil	VDRCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDGDD
Ga0335078_103183495	3300032805	Soil	VDRCQAEIAATEALLLAGHPDVEGLCMALADWSAELRILERDGDD
Ga0335078_111839212	3300032805	Soil	VDRCRAEIAATEAFLLAGHPDVEGLCMALADWSAELRILERDGDD
Ga0335078_113117661	3300032805	Soil	QREVERCLAEIAAIEALLLAGHADVEGLCMALADWSAELRILESDSDE
Ga0335080_102679002	3300032828	Soil	VDRCRAEIAASEALLLAGHPDVEGLCMALADWSAELRILERDGDD
Ga0335069_115113322	3300032893	Soil	VDRCRAEIAASEALLLAGHPDIEGLCMALADWSAELRILERVGDE
Ga0335083_107562931	3300032954	Soil	MDRCRAEIAEAKRLLRAGHPDVEGLCLMLSDWSAELRLLEEEQRRQ
Ga0326728_100023563	3300033402	Peat Soil	VDRCRAEIATAESLLRAGHPDVEGLCMALADWSSELRILEAEAEAEPPPDR
Ga0326728_100498976	3300033402	Peat Soil	VERCRAEIAATEALLLAGHPDVEGLCMALADWSAELRILNGDQ
Ga0326728_106184362	3300033402	Peat Soil	MSPGREAEWQRKVDRCRAEIATAEALLRAGHPDIEGLCLALSDWSAELRILEAGAEPPPD
Ga0314861_0152089_1003_1128	3300033977	Peatland	CRAEIAAAEALLLAGHPDVEGLCMALADWSAELRILERERL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences