NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100527

Metagenome Family F100527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100527
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 49 residues
Representative Sequence MIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP
Number of Associated Samples 70
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.39 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.490 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(16.667 % of family members)
Environment Ontology (ENVO) Unclassified
(47.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(75.490 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.71%    β-sheet: 0.00%    Coil/Unstructured: 35.29%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF05272VirE 5.88
PF13481AAA_25 4.90
PF01555N6_N4_Mtase 3.92
PF07120DUF1376 1.96
PF09669Phage_pRha 0.98
PF03747ADP_ribosyl_GH 0.98
PF08774VRR_NUC 0.98
PF07589PEP-CTERM 0.98
PF02518HATPase_c 0.98
PF07969Amidohydro_3 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG5545Predicted P-loop ATPase and inactivated derivativesMobilome: prophages, transposons [X] 5.88
COG0863DNA modification methylaseReplication, recombination and repair [L] 3.92
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 3.92
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 3.92
COG3756Uncharacterized conserved protein YdaU, DUF1376 familyFunction unknown [S] 1.96
COG1397ADP-ribosylglycohydrolasePosttranslational modification, protein turnover, chaperones [O] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.49 %
All OrganismsrootAll Organisms24.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004114|Ga0062593_100038065Not Available2845Open in IMG/M
3300004114|Ga0062593_100047118Not Available2649Open in IMG/M
3300004156|Ga0062589_100117117Not Available1743Open in IMG/M
3300004156|Ga0062589_100168932All Organisms → cellular organisms → Bacteria → Proteobacteria1531Open in IMG/M
3300004156|Ga0062589_100484911Not Available1036Open in IMG/M
3300004156|Ga0062589_100569930Not Available974Open in IMG/M
3300004463|Ga0063356_101082090Not Available1153Open in IMG/M
3300004643|Ga0062591_100146553Not Available1637Open in IMG/M
3300005093|Ga0062594_101627897Not Available670Open in IMG/M
3300005093|Ga0062594_102193047Not Available597Open in IMG/M
3300005093|Ga0062594_103158030Not Available516Open in IMG/M
3300005288|Ga0065714_10323135Not Available638Open in IMG/M
3300005290|Ga0065712_10078196Not Available3381Open in IMG/M
3300005293|Ga0065715_10016247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Indioceanicola → Indioceanicola profundi1881Open in IMG/M
3300005293|Ga0065715_10625417Not Available693Open in IMG/M
3300005329|Ga0070683_100000360All Organisms → cellular organisms → Bacteria → Proteobacteria31521Open in IMG/M
3300005329|Ga0070683_100000651All Organisms → cellular organisms → Bacteria → Proteobacteria25067Open in IMG/M
3300005330|Ga0070690_100242909Not Available1270Open in IMG/M
3300005330|Ga0070690_100582798Not Available847Open in IMG/M
3300005331|Ga0070670_100190096Not Available1783Open in IMG/M
3300005331|Ga0070670_101386925Not Available644Open in IMG/M
3300005335|Ga0070666_10657443Not Available767Open in IMG/M
3300005341|Ga0070691_10615983Not Available642Open in IMG/M
3300005344|Ga0070661_100437372Not Available1039Open in IMG/M
3300005355|Ga0070671_100445232Not Available1111Open in IMG/M
3300005356|Ga0070674_100247452Not Available1399Open in IMG/M
3300005441|Ga0070700_100878786Not Available728Open in IMG/M
3300005457|Ga0070662_101104505Not Available680Open in IMG/M
3300005466|Ga0070685_10925389Not Available650Open in IMG/M
3300005466|Ga0070685_10931936All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300005535|Ga0070684_100128558Not Available2284Open in IMG/M
3300005535|Ga0070684_100242393All Organisms → cellular organisms → Bacteria → Proteobacteria1647Open in IMG/M
3300005543|Ga0070672_101195835Not Available677Open in IMG/M
3300005544|Ga0070686_100327253Not Available1144Open in IMG/M
3300005544|Ga0070686_100554405Not Available899Open in IMG/M
3300005544|Ga0070686_100940258Not Available705Open in IMG/M
3300005564|Ga0070664_100095126Not Available2584Open in IMG/M
3300005617|Ga0068859_100859907All Organisms → cellular organisms → Bacteria → Proteobacteria993Open in IMG/M
3300005718|Ga0068866_10159698Not Available1313Open in IMG/M
3300005718|Ga0068866_10842078Not Available641Open in IMG/M
3300005719|Ga0068861_100793037Not Available888Open in IMG/M
3300005841|Ga0068863_101977707Not Available593Open in IMG/M
3300005842|Ga0068858_100604053Not Available1064Open in IMG/M
3300005844|Ga0068862_100500746Not Available1153Open in IMG/M
3300006881|Ga0068865_101319922Not Available642Open in IMG/M
3300009094|Ga0111539_12540834Not Available594Open in IMG/M
3300009177|Ga0105248_10771501All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300009551|Ga0105238_10157078Not Available2249Open in IMG/M
3300010397|Ga0134124_11310317All Organisms → cellular organisms → Bacteria → Proteobacteria748Open in IMG/M
3300010400|Ga0134122_11023555Not Available811Open in IMG/M
3300010403|Ga0134123_10324559All Organisms → cellular organisms → Bacteria → Proteobacteria1377Open in IMG/M
3300010403|Ga0134123_11365423All Organisms → cellular organisms → Bacteria → Proteobacteria747Open in IMG/M
3300010403|Ga0134123_11794003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. GC11667Open in IMG/M
3300011119|Ga0105246_11806550All Organisms → cellular organisms → Bacteria → Proteobacteria584Open in IMG/M
3300012892|Ga0157294_10024139All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300012892|Ga0157294_10235564Not Available556Open in IMG/M
3300014745|Ga0157377_11193531All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300014968|Ga0157379_10448893Not Available1190Open in IMG/M
3300015374|Ga0132255_102264799Not Available829Open in IMG/M
3300015374|Ga0132255_102510675Not Available787Open in IMG/M
3300019362|Ga0173479_10448677All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300023263|Ga0247800_1042490All Organisms → cellular organisms → Bacteria → Proteobacteria809Open in IMG/M
3300025315|Ga0207697_10014967All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans3210Open in IMG/M
3300025315|Ga0207697_10134505All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300025900|Ga0207710_10539929Not Available607Open in IMG/M
3300025901|Ga0207688_10511962Not Available752Open in IMG/M
3300025903|Ga0207680_10114726Not Available1753Open in IMG/M
3300025903|Ga0207680_10279564Not Available1159Open in IMG/M
3300025903|Ga0207680_10370259Not Available1009Open in IMG/M
3300025918|Ga0207662_10239675All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300025918|Ga0207662_10812212Not Available659Open in IMG/M
3300025920|Ga0207649_11122720All Organisms → cellular organisms → Bacteria → Proteobacteria620Open in IMG/M
3300025923|Ga0207681_10249385Not Available1385Open in IMG/M
3300025925|Ga0207650_11399035Not Available595Open in IMG/M
3300025926|Ga0207659_10124892Not Available1977Open in IMG/M
3300025926|Ga0207659_11378691Not Available605Open in IMG/M
3300025930|Ga0207701_10178130Not Available1876Open in IMG/M
3300025931|Ga0207644_10570383Not Available938Open in IMG/M
3300025931|Ga0207644_11234387Not Available628Open in IMG/M
3300025931|Ga0207644_11433924All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300025934|Ga0207686_10180970Not Available1495Open in IMG/M
3300025937|Ga0207669_10143276Not Available1662Open in IMG/M
3300025937|Ga0207669_11895031Not Available509Open in IMG/M
3300025938|Ga0207704_11144198All Organisms → cellular organisms → Bacteria → Proteobacteria662Open in IMG/M
3300025941|Ga0207711_10577293Not Available1049Open in IMG/M
3300025942|Ga0207689_11372050Not Available593Open in IMG/M
3300025944|Ga0207661_10005924Not Available8629Open in IMG/M
3300025944|Ga0207661_10230344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. GC111640Open in IMG/M
3300025960|Ga0207651_10026915All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium3602Open in IMG/M
3300025960|Ga0207651_10130232Not Available1924Open in IMG/M
3300025960|Ga0207651_11985993Not Available523Open in IMG/M
3300025972|Ga0207668_10133532Not Available1899Open in IMG/M
3300026035|Ga0207703_10541601Not Available1097Open in IMG/M
3300026088|Ga0207641_10458633Not Available1233Open in IMG/M
3300026088|Ga0207641_12423873Not Available523Open in IMG/M
3300028379|Ga0268266_11504420Not Available649Open in IMG/M
3300031547|Ga0310887_10386320Not Available821Open in IMG/M
3300031547|Ga0310887_10883747Not Available565Open in IMG/M
3300031847|Ga0310907_10856585Not Available512Open in IMG/M
3300032003|Ga0310897_10646582Not Available526Open in IMG/M
3300032075|Ga0310890_10049009Not Available2405Open in IMG/M
3300032211|Ga0310896_10416608Not Available721Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere16.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil9.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere8.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.88%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere3.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.94%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062593_10003806543300004114SoilMIAILCLLLAVVFALLSTTGIPEHPRWRFLSAAILFLALALLVGHLPWPPA*
Ga0062593_10004711833300004114SoilMIATLCLLLAVVFAALSATGVPEHPRWRFLSAAILFLALALLVGHLPWPAP*
Ga0062589_10011711743300004156SoilMIATLCLLVSLVFALLSATGVPEHPRWRHLSAALAFLVLALLLARLPWPAP*
Ga0062589_10016893253300004156SoilMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWTAP*
Ga0062589_10048491113300004156SoilMIATLCLLLAVVFAALSTTGIPEYPRSRFLSAAILFLALALLVGHLPWPAP*
Ga0062589_10056993013300004156SoilMIAILCLLLAVVFALLSTTGIPEHPRWRFLSAAILFLALALLVGHLPW
Ga0063356_10108209043300004463Arabidopsis Thaliana RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP*
Ga0062591_10014655313300004643SoilMIATLCLLLAVVFAALSTTGIPEYPRSRFLSAAILFLALALLVGHL
Ga0062594_10162789723300005093SoilMLATLCLILALACALLSAAGIPEYRRWRPLSAAVAFIVLALLLARLPWPPS*
Ga0062594_10219304733300005093SoilMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPAP*
Ga0062594_10315803023300005093SoilMIATLCLLIALVFALLSATGVPEHPRWRHLSAAIAFLVLALLLARLPWMPP*
Ga0065714_1032313523300005288Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPSP*
Ga0065712_1007819673300005290Miscanthus RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP*
Ga0065715_1001624733300005293Miscanthus RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPSP*
Ga0065715_1062541733300005293Miscanthus RhizosphereMIETLFLLIAAVFALLSTTGIPEHPRWYHLSAAILFLALALLVGHLPWPSP*
Ga0070683_100000360303300005329Corn RhizosphereMIATLFLLLAVVFALLSTTGVPEHPRWHHLSAAILFLALALLAGHLPWPAP*
Ga0070683_100000651203300005329Corn RhizosphereMIATLCLVVALAFALLSATGVPEHPRWRHLPAAIAFLVLALLLARLPWMPP*
Ga0070690_10024290943300005330Switchgrass RhizosphereMIETLFLLIAVVFALLSTTGIPEHPRWYHLSAAILFLALALLVGHLPWPSP*
Ga0070690_10058279813300005330Switchgrass RhizosphereMIATLCLLVALVFALLSATGVPEHPRWRFLSAAVAFLVLALLLARLPWPPS*
Ga0070670_10019009613300005331Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPW
Ga0070670_10138692533300005331Switchgrass RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPPA*
Ga0070666_1065744323300005335Switchgrass RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPPP*
Ga0070691_1061598313300005341Corn, Switchgrass And Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLVLALLVGHLPWSAP*
Ga0070661_10043737213300005344Corn RhizosphereMIATLFLLIAVVFALLSTTGIPEHHLSAAVLFLALALLVGHLPWPPA*
Ga0070671_10044523233300005355Switchgrass RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPP*
Ga0070674_10024745233300005356Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVSHLPWPAP*
Ga0070700_10087878623300005441Corn, Switchgrass And Miscanthus RhizosphereMIATLCLLVSLAFALLSATGVPEHPRWRFLSAAVAFLVLALLVARLPWTAP*
Ga0070662_10110450523300005457Corn RhizosphereMIATLCLLISLVFALLSATGIPEHPRWRHLSAAIAFLVLALLLARLP*
Ga0070685_1092538933300005466Switchgrass RhizosphereRLRAAMIATLCLLVALVFALLSATGVPEHPRWRFLSAAVAFLVLALLLARLPWPAP*
Ga0070685_1093193623300005466Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAAIAFLVLALLLARLPWMPP*
Ga0070684_10012855813300005535Corn RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHL
Ga0070684_10024239343300005535Corn RhizosphereLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWTAP*
Ga0070672_10119583543300005543Miscanthus RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALL
Ga0070686_10032725313300005544Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAALAFLVLALLLARLPWPPS*
Ga0070686_10055440523300005544Switchgrass RhizosphereMIATLFLLLSVVFALLSTTGIPQHPRWHHLSAAVLFLALALLVGHLPAWQP*
Ga0070686_10094025813300005544Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAAVAFLVLALLLARLPWPPS*
Ga0070664_10009512613300005564Corn RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHL
Ga0068859_10085990723300005617Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRHLPAAIAFLVLALLLARLPWMPP*
Ga0068866_1015969813300005718Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALA
Ga0068866_1084207813300005718Miscanthus RhizosphereMIATLCLLVSLAFALLSATGVPEHPRWRFLSAAVAFLVLALLVA
Ga0068861_10079303723300005719Switchgrass RhizosphereMIATLCLLISLVFALLSATGIPEHPRWRHLSAAIA
Ga0068863_10197770733300005841Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFL
Ga0068858_10060405333300005842Switchgrass RhizosphereMIATLCLLVALVFALLSATGVPEHPRWRFLSAAVAFLVLALLLARLPWPAP*
Ga0068862_10050074643300005844Switchgrass RhizosphereCLLVSLVFALLSATGVPEHPRWRHLSAALAFLVLALLLARLPWPAP*
Ga0068865_10131992213300006881Miscanthus RhizosphereLLAVVFAALSATGVPEHPRWRFLSAAILFLALALLVGHLPWPAP*
Ga0111539_1254083423300009094Populus RhizosphereMIATLCLLIALVFALLSATGVPEHPRWRHLSAAVAFLVLALLVARLPWPAP*
Ga0105248_1077150133300009177Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPP*
Ga0105238_1015707843300009551Corn RhizosphereMIATLFLLIAVVFASLSTTGIPEHPRWHHLSAAIVFLVLALLLARLPWMPP*
Ga0134124_1131031713300010397Terrestrial SoilLVSLVFALLSATGVPEHPRWRHLSAAVAFLVLALLVGHLPWPPA*
Ga0134122_1102355523300010400Terrestrial SoilMLATLCLLIALVFALLSATGIPEHPRWHHLSAAILFLALALLVGHLPWPAP*
Ga0134123_1032455943300010403Terrestrial SoilMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWMPP*
Ga0134123_1136542323300010403Terrestrial SoilMIATLCLLIAVVFALLSTTGVPEHPRWHHLSAAILFVALALLVGHLPWGAP*
Ga0134123_1179400313300010403Terrestrial SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPEP*
Ga0105246_1180655013300011119Miscanthus RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPA*
Ga0157294_1002413923300012892SoilMIATLFLLIAVVFALLSTNGIPEHPRWHHLSAAILFLALALLVGHLPWPPA*
Ga0157294_1023556423300012892SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAQ*
Ga0157377_1119353113300014745Miscanthus RhizosphereIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPP*
Ga0157379_1044889313300014968Switchgrass RhizosphereLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP*
Ga0132255_10226479923300015374Arabidopsis RhizosphereMIATLFLLLAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAQ*
Ga0132255_10251067513300015374Arabidopsis RhizosphereATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPSP*
Ga0173479_1044867723300019362SoilMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWTAP
Ga0247800_104249033300023263SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWTAP
Ga0207697_1001496773300025315Corn, Switchgrass And Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP
Ga0207697_1013450523300025315Corn, Switchgrass And Miscanthus RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRHLPAAIAFLVLALLLARLPWMPP
Ga0207710_1053992923300025900Switchgrass RhizosphereMIETLFLLIAVVFALLSTTGIPEHPRWYHLSAAILFLALALLVGHLPWPSP
Ga0207688_1051196223300025901Corn, Switchgrass And Miscanthus RhizosphereMIATLCLLLAVVFAALSATGVPEHPRWRFLSAAILFLALALLVGHLPWPAP
Ga0207680_1011472633300025903Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP
Ga0207680_1027956423300025903Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAAVAFLVLALLLARLPWPPS
Ga0207680_1037025913300025903Switchgrass RhizosphereMIATLCLLLAVVFAALSATGVPEHPRWRFLSAAILFLAL
Ga0207662_1023967533300025918Switchgrass RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPAP
Ga0207662_1081221233300025918Switchgrass RhizosphereMIETLFLLIAAVFALLSTTGIPEHPRWYHLSAAILFLALALLVGHLPWPSP
Ga0207649_1112272033300025920Corn RhizosphereMIATLFLLLAVVFALLSTTGVPEHPRWHHLSAAILFLALALLAGHLPWPAP
Ga0207681_1024938523300025923Switchgrass RhizosphereMIATLCLLISLVFALLSATGIPEHPRWRHLSAAIAFLVLALLLARLP
Ga0207650_1139903513300025925Switchgrass RhizosphereATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPPA
Ga0207659_1012489253300025926Miscanthus RhizosphereTLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAP
Ga0207659_1137869123300025926Miscanthus RhizosphereMIATLFLLIAVVFALLSTSGIPEHPRWHHLSAAILFLALA
Ga0207701_1017813013300025930Corn, Switchgrass And Miscanthus RhizosphereMIATLFLLLSVVFALLSTTGIPQHPRWHHLSAAVLFLALALLVGHLPAWQP
Ga0207644_1057038333300025931Switchgrass RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPP
Ga0207644_1123438733300025931Switchgrass RhizosphereCLLIALVFALLSATGIPEHPRWRFLPAALAFLVLALLLARLPWPPS
Ga0207644_1143392433300025931Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAAIAFLVLALLLARLPWMPP
Ga0207686_1018097053300025934Miscanthus RhizosphereMIATLCLLVSLAFALLSATGVPEHPRWRFLSAAVAFLVLALLVARLPWTAP
Ga0207669_1014327643300025937Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVSHLPWPAP
Ga0207669_1189503123300025937Miscanthus RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPA
Ga0207704_1114419833300025938Miscanthus RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRFLPAAIAFLVLALLLARLPWMPP
Ga0207711_1057729333300025941Switchgrass RhizosphereMIATLCLLLAVVFAALSATGIPEHPRWRFLSAAILFLALALLVGHLPWPAP
Ga0207689_1137205023300025942Miscanthus RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPAP
Ga0207661_10005924123300025944Corn RhizosphereMIATLCLVVALAFALLSATGVPEHPRWRHLPAAIAFLVLALLLARLPWMPP
Ga0207661_1023034413300025944Corn RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGH
Ga0207651_1002691553300025960Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPPP
Ga0207651_1013023233300025960Switchgrass RhizosphereMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLA
Ga0207651_1198599333300025960Switchgrass RhizosphereRATGAEMIATLFLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPSP
Ga0207668_1013353243300025972Switchgrass RhizosphereMIATLCLLIALVFALLSATGIPEHPRWRFLPAALAFLVLALLLARLPWPPS
Ga0207703_1054160133300026035Switchgrass RhizosphereMIATLCLLVALVFALLSATGVPEHPRWRFLSAAVAFLVLALLLARLPWPAP
Ga0207641_1045863343300026088Switchgrass RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPW
Ga0207641_1242387313300026088Switchgrass RhizosphereMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLP
Ga0268266_1150442023300028379Switchgrass RhizosphereMLATLCLLIALVFALLSATGIPEHPRWRFLPAALAFLVLALLLARLPWPPS
Ga0310887_1038632013300031547SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALL
Ga0310887_1088374713300031547SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILF
Ga0310907_1085658513300031847SoilMIATLCLLIAVVFALLSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPAQ
Ga0310897_1064658233300032003SoilTLSLLVSLVFALLSATGIPEHPRWRHLSAAIAFLVLALLLARLPWMPP
Ga0310890_1004900923300032075SoilMIATLCLLIALVFALLSATGIPEHPRWRHLSAAVAFLVLALLLARLPWPPA
Ga0310896_1041660833300032211SoilLLIAVVFAALSTTGIPEHPRWHHLSAAILFLALALLVGHLPWPSP


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