Metagenome / Metatranscriptome Family F100523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	85 residues
Representative Sequence	MTFVSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.06 %
% of genes near scaffold ends (potentially truncated)	18.63 %
% of genes from short scaffolds (< 2000 bps)	64.71 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (42.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.54% β-sheet: 14.29% Coil/Unstructured: 65.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03704	BTAD	52.94
PF00072	Response_reg	4.90
PF12833	HTH_18	4.90
PF04820	Trp_halogenase	3.92
PF00196	GerE	1.96
PF04632	FUSC	1.96
PF07730	HisKA_3	1.96
PF06114	Peptidase_M78	0.98
PF13533	Biotin_lipoyl_2	0.98
PF05145	AbrB	0.98
PF02803	Thiolase_C	0.98
PF07969	Amidohydro_3	0.98
PF08450	SGL	0.98
PF13360	PQQ_2	0.98
PF04970	LRAT	0.98
PF01435	Peptidase_M48	0.98
PF00486	Trans_reg_C	0.98
PF06071	YchF-GTPase_C	0.98
PF06628	Catalase-rel	0.98
PF02771	Acyl-CoA_dh_N	0.98
PF00174	Oxidored_molyb	0.98
PF13426	PAS_9	0.98
PF12821	ThrE_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	52.94
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	52.94
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	1.96
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.96
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.96
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.96
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.96
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.98
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.98
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.98
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.98
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.98
COG3180	Uncharacterized membrane protein AbrB, regulator of aidB expression	General function prediction only [R]	0.98
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.98
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.98
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	35.29 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	33.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	33.33 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	33.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.98 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	33.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.98 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	33.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
unclassified Syntrophobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter	0.98 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	33.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Syntrophobacter sp. SbD1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD1	0.98 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1031530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	570	Open in IMG/M
3300001471\|JGI12712J15308_10106781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	712	Open in IMG/M
3300002245\|JGIcombinedJ26739_100545702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1036	Open in IMG/M
3300002245\|JGIcombinedJ26739_101118087	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300002245\|JGIcombinedJ26739_101685887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	533	Open in IMG/M
3300002917\|JGI25616J43925_10016419	All Organisms → cellular organisms → Bacteria → Proteobacteria	3281	Open in IMG/M
3300006059\|Ga0075017_100134857	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300006059\|Ga0075017_100281426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1224	Open in IMG/M
3300006162\|Ga0075030_100187072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1670	Open in IMG/M
3300006893\|Ga0073928_10003110	All Organisms → cellular organisms → Bacteria → Proteobacteria	26789	Open in IMG/M
3300007258\|Ga0099793_10096288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1365	Open in IMG/M
3300007265\|Ga0099794_10121218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1316	Open in IMG/M
3300007788\|Ga0099795_10006228	All Organisms → cellular organisms → Bacteria → Proteobacteria	3241	Open in IMG/M
3300009038\|Ga0099829_10782801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	792	Open in IMG/M
3300010880\|Ga0126350_11324659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	710	Open in IMG/M
3300010880\|Ga0126350_11773100	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300011269\|Ga0137392_11086678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300011271\|Ga0137393_11324699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	609	Open in IMG/M
3300012096\|Ga0137389_11551343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	558	Open in IMG/M
3300012189\|Ga0137388_10447683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1198	Open in IMG/M
3300012202\|Ga0137363_11032998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	698	Open in IMG/M
3300012205\|Ga0137362_10398316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1192	Open in IMG/M
3300012359\|Ga0137385_10728053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	827	Open in IMG/M
3300012363\|Ga0137390_11808911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300012923\|Ga0137359_10520393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1048	Open in IMG/M
3300012924\|Ga0137413_11000669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
3300012925\|Ga0137419_10015234	All Organisms → cellular organisms → Bacteria → Proteobacteria	4320	Open in IMG/M
3300013306\|Ga0163162_11620624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	738	Open in IMG/M
3300015051\|Ga0137414_1143335	All Organisms → cellular organisms → Bacteria	3921	Open in IMG/M
3300015242\|Ga0137412_10004605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11003	Open in IMG/M
3300015242\|Ga0137412_10275429	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300019789\|Ga0137408_1297895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1346	Open in IMG/M
3300019886\|Ga0193727_1000318	All Organisms → cellular organisms → Bacteria → Proteobacteria	18208	Open in IMG/M
3300019886\|Ga0193727_1000519	All Organisms → cellular organisms → Bacteria → Proteobacteria	15025	Open in IMG/M
3300019886\|Ga0193727_1000696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13363	Open in IMG/M
3300019886\|Ga0193727_1004251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5875	Open in IMG/M
3300019886\|Ga0193727_1004469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	5716	Open in IMG/M
3300019886\|Ga0193727_1006844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4564	Open in IMG/M
3300019887\|Ga0193729_1084327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300019887\|Ga0193729_1152824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	832	Open in IMG/M
3300020001\|Ga0193731_1042307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1203	Open in IMG/M
3300020002\|Ga0193730_1162059	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300020004\|Ga0193755_1031089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1767	Open in IMG/M
3300020021\|Ga0193726_1105537	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300020034\|Ga0193753_10293152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	703	Open in IMG/M
3300020060\|Ga0193717_1025665	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300020061\|Ga0193716_1071426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1560	Open in IMG/M
3300020199\|Ga0179592_10000016	All Organisms → cellular organisms → Bacteria → Proteobacteria	81374	Open in IMG/M
3300020199\|Ga0179592_10000149	All Organisms → cellular organisms → Bacteria → Proteobacteria	28978	Open in IMG/M
3300020199\|Ga0179592_10019259	All Organisms → cellular organisms → Bacteria → Proteobacteria	3020	Open in IMG/M
3300020579\|Ga0210407_10010391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6947	Open in IMG/M
3300020580\|Ga0210403_10054674	All Organisms → cellular organisms → Bacteria → Proteobacteria	3194	Open in IMG/M
3300020580\|Ga0210403_10158676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1851	Open in IMG/M
3300020583\|Ga0210401_10021648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	6163	Open in IMG/M
3300021168\|Ga0210406_10019380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6373	Open in IMG/M
3300021170\|Ga0210400_10319551	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300021433\|Ga0210391_11108025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	615	Open in IMG/M
3300021475\|Ga0210392_11196780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300021475\|Ga0210392_11219573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	563	Open in IMG/M
3300021478\|Ga0210402_10196543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1852	Open in IMG/M
3300021478\|Ga0210402_10468994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1169	Open in IMG/M
3300021478\|Ga0210402_10933876	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300021479\|Ga0210410_10136877	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300022557\|Ga0212123_10007792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	16783	Open in IMG/M
3300022726\|Ga0242654_10336109	Not Available	565	Open in IMG/M
3300024330\|Ga0137417_1090028	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300026304\|Ga0209240_1036489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1869	Open in IMG/M
3300026319\|Ga0209647_1084779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1554	Open in IMG/M
3300026320\|Ga0209131_1030372	All Organisms → cellular organisms → Bacteria → Proteobacteria	3172	Open in IMG/M
3300026475\|Ga0257147_1023899	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300026514\|Ga0257168_1088201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	689	Open in IMG/M
3300026551\|Ga0209648_10315090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300026555\|Ga0179593_1071828	All Organisms → cellular organisms → Bacteria → Proteobacteria	2757	Open in IMG/M
3300026555\|Ga0179593_1151204	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300026557\|Ga0179587_10521136	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300027521\|Ga0209524_1052137	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300027528\|Ga0208985_1067791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	689	Open in IMG/M
3300027605\|Ga0209329_1014512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1541	Open in IMG/M
3300027660\|Ga0209736_1022233	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937	Open in IMG/M
3300027671\|Ga0209588_1038070	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300027674\|Ga0209118_1099474	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300027684\|Ga0209626_1020324	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300027684\|Ga0209626_1162834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD1	590	Open in IMG/M
3300027829\|Ga0209773_10315827	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300027862\|Ga0209701_10055140	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300027903\|Ga0209488_10051276	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300027908\|Ga0209006_10021063	All Organisms → cellular organisms → Bacteria → Proteobacteria	5909	Open in IMG/M
3300027908\|Ga0209006_10088574	All Organisms → cellular organisms → Bacteria → Proteobacteria	2751	Open in IMG/M
3300027908\|Ga0209006_10314090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1334	Open in IMG/M
3300027911\|Ga0209698_10824283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	700	Open in IMG/M
3300028047\|Ga0209526_10044651	All Organisms → cellular organisms → Bacteria	3118	Open in IMG/M
3300028536\|Ga0137415_10257919	All Organisms → cellular organisms → Bacteria → Proteobacteria	1551	Open in IMG/M
3300031057\|Ga0170834_111786023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	942	Open in IMG/M
3300031231\|Ga0170824_110737705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1406	Open in IMG/M
3300031236\|Ga0302324_100150962	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
3300031446\|Ga0170820_14959289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	650	Open in IMG/M
3300031474\|Ga0170818_108343631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	786	Open in IMG/M
3300031823\|Ga0307478_10052227	All Organisms → cellular organisms → Bacteria	3035	Open in IMG/M
3300032174\|Ga0307470_10000481	All Organisms → cellular organisms → Bacteria → Proteobacteria	19611	Open in IMG/M
3300032174\|Ga0307470_10001004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	11687	Open in IMG/M
3300032174\|Ga0307470_10039943	All Organisms → cellular organisms → Bacteria → Proteobacteria	2316	Open in IMG/M
3300032180\|Ga0307471_102559355	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.18%
Aquatic	Environmental → Aquatic	6.86%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Sediment	Environmental → Aquatic → Sediment	3.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.49%
Loam	Environmental → Terrestrial → Soil → Loam	14.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.98%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10315301	3300000546	Quercus Rhizosphere	MTFVSQRMSEYYLAGNSEATGFWSGTKNPRWVRTLSRRALVICITASTSVLARSFTTRGSRAVCAGDQWKKFLSLISRADIASG*
JGI12712J15308_101067811	3300001471	Forest Soil	MIFVSQGLSVRYLAGNSEATGSWSGTKNPRXVRTLSHLGAAISITASTSVLARSFTTRDSRTVYAEDRWKKFLSLISRADSASG*
JGIcombinedJ26739_1005457022	3300002245	Forest Soil	MMYVSQGVSVRYLAGNSEATGSWSGTKNLRWVRTLSHLGVAICITASTSVLAMSFTTRGARTVCAENRWKRFLSLISRADSASG*
JGIcombinedJ26739_1011180872	3300002245	Forest Soil	MTFVFQGVSVRYFAGDSVATGSWSGTKNLRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISR
JGIcombinedJ26739_1016858871	3300002245	Forest Soil	MTIDSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRDSRAVCAVDRWKKFLSLISRADSASG*
JGI25616J43925_100164193	3300002917	Grasslands Soil	MTFVSQGVSVRYLAGNSEAIGYWSGTKNPRWVRTLSHPGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0075017_1001348571	3300006059	Watersheds	MTFVSQGVGVRYLAGNSEATGPWWGTKNLRWVRTLSHPGAAISIMASTSELSRSFTTRGSRTVCAEDRWKKFLSL
Ga0075017_1002814261	3300006059	Watersheds	MMFVSQNVSVRYLSGNLAATGSWSIAKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLVSRADITSG*
Ga0075030_1001870721	3300006162	Watersheds	MTFVSQGVGVRYLAGNSEATGPWWGTKNLRWVRTLSHPGAAISIMASTSELSRSFTTRGSRTVCAEDRWKKFLSLISRADITSG*
Ga0073928_100031108	3300006893	Iron-Sulfur Acid Spring	MTFVSQGVSVRYLAGNSEATGFWSGSKNPRWVRTLSHLGAAICITASTSVLARSCTTRGSRTVCAEDRWKKFLSLISRAESASG*
Ga0099793_100962881	3300007258	Vadose Zone Soil	MTFVSQGVSVRYLAGNSVATGSWSGTRNSRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRSDSASGCDRTRHPISMFERSSAEHDPV
Ga0099794_101212181	3300007265	Vadose Zone Soil	MTLVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSTSG*
Ga0099795_100062281	3300007788	Vadose Zone Soil	MTLVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSACG*
Ga0099829_107828012	3300009038	Vadose Zone Soil	MTFVSQGVSVRYLDGNSEASGFWSGTRNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSACG*
Ga0126350_113246592	3300010880	Boreal Forest Soil	MTCISQGVIVRYLAENLAATGSWSGTKNPRWVRTLSHLGAAICITASTSVRARSFTIRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0126350_117731001	3300010880	Boreal Forest Soil	MTFVSQSVSVRYLAGNSEATGLWSGTKNPRWVRTLSHLGAAICITASTSALARSFTTQGSRRVCVEDRWKKFLSLISRADS
Ga0137392_110866782	3300011269	Vadose Zone Soil	MTFVSQGVNVRYLAGNSEATGAWSGTKNPRWDRTLSHLGGAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRAHSGSG*
Ga0137393_113246992	3300011271	Vadose Zone Soil	MTFVSQGVSVRCLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0137389_115513432	3300012096	Vadose Zone Soil	MTLVSQGVSVRYLAGNSEATGSWSGTKNLRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADS
Ga0137388_104476832	3300012189	Vadose Zone Soil	MTIVSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHRGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0137363_110329981	3300012202	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0137362_103983162	3300012205	Vadose Zone Soil	MTFVSQGVSVRSLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSACG*
Ga0137385_107280532	3300012359	Vadose Zone Soil	MTFVSQGVSVRDLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG*
Ga0137390_118089111	3300012363	Vadose Zone Soil	MTFVSQGVNVRYLAGNSEATGAWSGTKNPRWDRTLSHLGAAICITASTSVPARSFTTRGSHTVCAEDRWKKFLSLISRADSASG*
Ga0137359_105203931	3300012923	Vadose Zone Soil	MTFVSQGVSVRYLAVDSEATGFWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSTSG*
Ga0137413_110006691	3300012924	Vadose Zone Soil	MTFVSPSVSVRYLTGKSEPTGSWSATKNPRWVRTLSHRGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLWLISRGGTPELHLAQLKG*
Ga0137419_100152342	3300012925	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGSWPGTRNPRWVRTLSHLGAAICITASTSVLARSCTTQGSRTVCAEDRWKRFLSLISRANSTSG*
Ga0163162_116206242	3300013306	Switchgrass Rhizosphere	VSECYLADHSEATSYWSGTRNPRWVRTLSHPGAAVCITTSTSALAKSFTTRGSRTVCAEGRWKRFLSLISRADSALGRDRTRHLSFDQ*
Ga0137414_11433354	3300015051	Vadose Zone Soil	MTSVSQGVSVRYLAGNPEAAGFWSETKNPRWVRTLSHLGAAICITASTSVLARSCTTQGSRTVCAEDRWRRFLSLISRANSTSG*
Ga0137412_1000460511	3300015242	Vadose Zone Soil	MTFVSQDVSVRYLAGNSEATGSWPGTKNPRWVRTLSHLGAAICITASTSVLARSFTTQGSRTVCAEDRWKKFLSLISRADSTSG*
Ga0137412_102754291	3300015242	Vadose Zone Soil	MTFVSQDVNARYLAAVDSEATGFWSATENLRWVRTLSHLGAAICITASTSVPARSFTTRGSRTVCAEGRWKKFLSLISRADSVSG*
Ga0137408_12978951	3300019789	Vadose Zone Soil	MTFVSQGVSVLYLAGNSEATGFWSGTRNRRWVRTLSHPGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0193727_10003186	3300019886	Soil	MTLASETMGYWSGTKNPRWVRTLSRPGAAICITASMLVLARSFTTRGSRTVCAEDRWKKFLSFISRPESASG
Ga0193727_100051910	3300019886	Soil	MTFVSSCVSVRYLAGSLEATGSWSGTKNPRWVRTLSHLGAAIGITASTSALARSFTTRGSHTVYAEERWKKFLSLISRADSASG
Ga0193727_100069616	3300019886	Soil	MTFVSQGVSVRYLPGNGEATGSCSGTKNPRWVRTLSHLGAVICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSTYWCDRTRHPISTFERSSAEHDPVWGKTAIGC
Ga0193727_10042515	3300019886	Soil	MTLVSQGVSVCHLAGSSEATGFWSGTKSPRWVRTLSRLGVAICITASTPVLARSFTIRGSRTVCAEDRWKKFLSLISRARSASG
Ga0193727_10044696	3300019886	Soil	MMLVSQCVSVRYLADHAVVTVSWSGTKNPRWVRTLSHLGADICITASTSVLARSFTTRGSGTVCAEDRWKKFLSLISRADIASG
Ga0193727_10068443	3300019886	Soil	MIFVSQRMSEYYLAGNSEATGFWSGTKNPRWVRTLSRRALVICITASTSVLARSFTTRGSRAVCAGDQWKKFLSLISRADIASG
Ga0193729_10843271	3300019887	Soil	MTFVSQGASVRYLAGNSEATGSWSGTRNPRWVRTLSHLGAAICITASTSVLARSFTTRGSHTVCAEDRWKKFLSLISRAASASG
Ga0193729_11528242	3300019887	Soil	MTFVSQCVSVHYLAENSEATGWSGSKNPRWVRTLSHLGAAICITASTPVLATSFTARGSRTVCAEERWKKFLSLISRADIASG
Ga0193731_10423071	3300020001	Soil	MTIDSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRAASASG
Ga0193730_11620591	3300020002	Soil	MTFVSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTPVLATSFTARGSRTVCAEERWKKF
Ga0193755_10310892	3300020004	Soil	MTLVSQGVSVCHLAGSSEATGFWSGTKSPRWVRTLSRLGVAICITASTPVLARSFTIRGSRTVCAEDRWKKFLSLISRADSASG
Ga0193726_11055372	3300020021	Soil	MTFDSQSVSVHCLAGNTEATGTWSGIKNPRWVRTLSHLGAAICITASPSALARSFTTRGARTVCAGERWKKFLSLISRADIAS
Ga0193753_102931522	3300020034	Soil	MAFVSQRVSVCYLAGKSEAAGFWSETKSPPWVRTLSRRGLVICITASTSVLARSFTTRGSRMVCAGDQWKKFLSLISRADIASG
Ga0193717_10256654	3300020060	Soil	MMLVSQCVSARCPAGNSVAAGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISHADTAS
Ga0193716_10714262	3300020061	Soil	MTVVSQGLSTRHPDGDSGATCYWSGTKNPRWVRTLSHPGAAISITASMSVLARSFTTLGSPTVCAEGRWKRFLSIISRTDSASG
Ga0179592_1000001640	3300020199	Vadose Zone Soil	MTFVSPSVSVRYLTGKSEATGSWSATKNPRWVRTLSHRGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLWLISRGGTPELHLAQLKG
Ga0179592_1000014912	3300020199	Vadose Zone Soil	MTFVSQGVSVCYLAGNSVATGSWSAIKNPRWVCTLSRLGAAICITASTSVLAKSFTTRGSRTVCAEDRWKKFLSLVSRASSGSG
Ga0179592_100192592	3300020199	Vadose Zone Soil	MTFISQGASVRYLAGNSEATGSWSGTKNPRWVHTLSHLGAAICITASTSVLARSFITRGSLTVCAEDRWKKFLSLISRADGESG
Ga0210407_100103912	3300020579	Soil	VSACYLSGNAEATGFWSEPKNPRWVRTLSHLGAAVYITASTSVLARSFTAWGSPTVCAGDQWKKFLSFLALISSADIASR
Ga0210403_100546743	3300020580	Soil	MTFVSHGVSVLYLAGNSPATGYWSGNKNPRWVRTLSHPGAAICITASTLVSARSFTIRGSRTVCAEGRWKKFLSLISRADCASG
Ga0210403_101586761	3300020580	Soil	MMFVSQGVSVRYLAGNSEATGFWSGTKNPRWVRTWSLLGAAICITASPSVLARSFTTRDSRTVCAEDRWKKFLSLISRADSASG
Ga0210401_100216487	3300020583	Soil	VSACFLAGHSEATGYWPGTKNPRWVRTLSHPGAAICITASTSVLARSFTTRGSGTAYAEDRWKKFLSLISHGDSASTEAAAKPLRS
Ga0210406_100193806	3300021168	Soil	MFISQNASARYLAGNSEAAGVWTGTTNPRWVRTLSHLGAAICITASTSVLAWSFTTRGSRMVWAEDRWKKFLWLISRAGSESGCDPTRHPIWTFER
Ga0210400_103195511	3300021170	Soil	MTFVSQCVSVHYQAGNSEATGFWSGTKSPRWVRTLSHLGAAICITASTSVPARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0210391_111080252	3300021433	Soil	VSACFLAGHSEATGYWPGTKNPRWVRTLSHPGAAICITASTSVLARSFTTRGSGTAYAEDRWKKFLSLISHGDSASTEAAAK
Ga0210392_111967801	3300021475	Soil	MRAYQGVSVRCQTGNSEATGYWSGTKNPRWVRTLSHPGAAICITASTSVLAKLFITQGSRAVCVEDRWKKFLSLVSLAGSASG
Ga0210392_112195731	3300021475	Soil	VSACYLSGNAEATGFWSEPKNPRWVRTLSHLGAAVYITASTSVLARSFTAWGSPTVCAGDQWKKFLS
Ga0210402_101965432	3300021478	Soil	MMFVSQGVSVRYLAGNSEATGSWSGTKNSRWVRTLSHLGEAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSRISRADSACG
Ga0210402_104689941	3300021478	Soil	MTFVSQGVSVRYLAGNSEATGSWSGIRNPRWVRTLSHLGAAICITASTSAPARLFTTRGSRMVCAEDRWKKFLSLISRADSTSG
Ga0210402_109338761	3300021478	Soil	MTFVSQGVSARDLAGNSEAIGSWSGTTNLRWVRTLSHLGAAICITASTSVLAWSCTTRGSRTVCAEDRWKKFLSLIS
Ga0210410_101368772	3300021479	Soil	MTLDTQGVSAPYLAGNSEVTGYWSGTKNPRWVRTLSHPAAAICITASTSVLARSFTTRGTHTVCAEDRWKKFLSLVSRADITSG
Ga0212123_100077928	3300022557	Iron-Sulfur Acid Spring	MTFVSQGVSVRYLAGNSEATGFWSGSKNPRWVRTLSHLGAAICITASTSVLARSCTTRGSRTVCAEDRWKKFLSLISRAESASG
Ga0242654_103361092	3300022726	Soil	SQRARARRLPRARRRAVSACYLSGNAEATGFWSEPKNPRWVRTLSHLGAAVYITASTSVLARSFTAWGSPTVCAGDQWKKFLSFLALISSADIASR
Ga0137417_10900282	3300024330	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGSWPGTRNPRWVRTLSHLGAAICITASTSVLARSCTTQGSRTVCAEDRWKRFLSLISRANSTSG
Ga0209240_10364892	3300026304	Grasslands Soil	MTFVSQGVSVRYLAGNSEAIGYWSGTKNPRWVRTLSHPGAAICITSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0209647_10847792	3300026319	Grasslands Soil	MTFVSQGVSVRYLAGNSEATGSWSGSKNPRWVRTLSHLGAAICITASTSVLAKSFTTRGSRTVCVEDRWKKFLSLISRADSASG
Ga0209131_10303723	3300026320	Grasslands Soil	MTSVSQGVSVRYLAGNPEAAGFWSETKNPRWVRTLSHLGAAICITASTSVLARSCTTQGSRTVCAEDRWRRFLSLISRANSTSG
Ga0257147_10238991	3300026475	Soil	MMFVSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRAVCAEDR
Ga0257168_10882012	3300026514	Soil	MTFVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADGASGCDRTRHPISTFERSSAEHDPVWGKTAIGC
Ga0209648_103150902	3300026551	Grasslands Soil	MTFVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADGASG
Ga0179593_10718283	3300026555	Vadose Zone Soil	MTLISQSVSVRHLDGNSEASGFWSGTKNPRWARTLSHLGAAICITASTSVPATLFTTRDSRTVCAEDRWKRFLSLISRADSASG
Ga0179593_11512041	3300026555	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGFWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSACG
Ga0179587_105211362	3300026557	Vadose Zone Soil	MTLVSQGVSVRYLTGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWK
Ga0209524_10521372	3300027521	Forest Soil	MTFVFQGVSVRYFAGDSVATGSWSGTKNPRWVRTLSHLGAAICITASTSVPARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0208985_10677912	3300027528	Forest Soil	MTIVSQSASVRHLTGNSEATGCWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTQGSRTVCAEDRWKKFLSLISRTDSASG
Ga0209329_10145123	3300027605	Forest Soil	MTFVSQDVSVHYLAGNSEATGSWSGTKNLRWARTLSHLGAAICITASTSVPARSFTTRGSPTVCAEDRWKKFLSLISRADSTSG
Ga0209736_10222332	3300027660	Forest Soil	MRAYQGVSVRCQTENSEATGYWSGTKNPRWVRTLLHPGAAICITASTSALAKSFITQGSRAVCVEDRWKKFLSLISLAGNASG
Ga0209588_10380702	3300027671	Vadose Zone Soil	MTLVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSTSG
Ga0209118_10994741	3300027674	Forest Soil	MTFVSQGVSVRYLAGSSVANGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGARAVCAENRWKKFLSLISRADSASWC
Ga0209626_10203242	3300027684	Forest Soil	MKLLRLCSDEETTVTFVSQRVSVRYQAGNSDATSYWSGTEDPRWVRTLSHPGAAICITASTSVLARSFITRGSRTVCAEDRWKKFLSLISRSGSASG
Ga0209626_11628342	3300027684	Forest Soil	MTIDSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSALARSFTTRGSRTVCAEDRWKRFLSLISRADITS
Ga0209773_103158272	3300027829	Bog Forest Soil	MSFISQGVSVRYLAGKSDATGYWSGSKNPRWGRTLSPPGAAICITASTSVLTRSFTTRDSRTVCTEDRWKRFLSLI
Ga0209701_100551404	3300027862	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0209488_100512763	3300027903	Vadose Zone Soil	MTLVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSACG
Ga0209006_100210634	3300027908	Forest Soil	MTIVSQGASVRLLGGNAEATCSWSGTKNPRWARTLSHVGEAICITASTSALARSFTTRGSHTVFAEGRWKKFLSLISRAGGASGCDRTRHPISTFERSFAGRNPVWGKTAIGC
Ga0209006_100885742	3300027908	Forest Soil	MIFVSQGLSVRYLAGNSEATGSWSGTKNPRWVRTLSHLGAAISITASTSVLARSFTTRDSRTVYAEDRWKKFLSLISRADSASG
Ga0209006_103140902	3300027908	Forest Soil	MMFISQGVSVRCLAGNSEATGSWSGTKNLRWVRTLSHLGAAICITASTSVLATSFTTRDACTVCAENRWKKFLSLISRADSASGSDRTRHPISTFERSSAGHDPVWGKTVIGC
Ga0209698_108242832	3300027911	Watersheds	MTFVSQGVSVRQLAGNSETSAFWSTTKNPRWVRTLSHPGAAIYIMVSTSVLARSFITRGSRTVCAEDRWKKFLSLISRADITSG
Ga0209526_100446512	3300028047	Forest Soil	MMYVSQGVSVRYLAGNSEATGSWSGTKNLRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSASG
Ga0137415_102579192	3300028536	Vadose Zone Soil	MTFVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRADSVSG
Ga0170834_1117860231	3300031057	Forest Soil	MTFVSQGVSVRYLAGNSEATGSWSGTENPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSVISRADSASG
Ga0170824_1107377054	3300031231	Forest Soil	MYASHDPSVRYQAGNSVVTGSWSETRNPRWVRTLSHLGAANCITASTSVLAKSFTTRGSRTVCAEDRWKTFLSLISRTDSASG
Ga0302324_1001509622	3300031236	Palsa	MTFVSQGVSAGYPGGKSEATGSWSGTKNPRWVRTLSHLGAAICITGSTSVLARSFTTRGSHTVCAEDRWKKFLSIISRAGGASG
Ga0170820_149592892	3300031446	Forest Soil	MMFVSQGVSARCLAGNSEATGYWSGTKNPRWVRTLSHPGADICITASTSVLVRSFTTRGLRTVCAEDRWKKFLSLLSRAESPDHPCADIFVVPG
Ga0170818_1083436312	3300031474	Forest Soil	MTFVSQSVSMRHLAGNSEVTGSWSGTRNPRWVRTLSHLGAAICITASTSGLAKSFTTRDSRTACAEDRWKKFLSLISRADSASG
Ga0307478_100522273	3300031823	Hardwood Forest Soil	MTFVSQGVSARCLAGNSEATGAWSGTRNPRWVRTLSHLGAAICITASTSVLARSFTTRGSRTVCAEDRWKKFLSLISRAASASGCDRTRPPISTFERSSAEHDPVWGKPAIGC
Ga0307470_1000048111	3300032174	Hardwood Forest Soil	MTFVSQGVSVRYPAGNSVAAGSWSGTKNPRWVRTLSHLGAAICITASTSVLARSFTTRDSRTVCAEDRWKKFLSLISRAASASG
Ga0307470_100010044	3300032174	Hardwood Forest Soil	MTFVTQGVSVRYLAGNSEVTGAWSGTKNPRWVRTLSHLGAAICITASTSVPARSFTTRGSRAVCAEDRWKKFLSLISRADSVSGRDPTPHPISTFERSSAEHDPVWARTAIDC
Ga0307470_100399434	3300032174	Hardwood Forest Soil	MSASTWAAMTPTKNRRWVRTLSHPGAATCITASTVLARSFTIRGSRTVCAEGRWKKFLSLISRAGSASG
Ga0307471_1025593551	3300032180	Hardwood Forest Soil	MTFVSQGVSVRYLAGHPEWTGSWSGTTNPRWVRTLSHLGAAICITASTSVLARSFTTRDSRTVCAEDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences