Metagenome / Metatranscriptome Family F100522

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100522
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	73 residues
Representative Sequence	VSEKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHLDPPLHTEGSHEEGQRNVLKANAEGKVCFT
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.55 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (36.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.31% β-sheet: 0.00% Coil/Unstructured: 68.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04226	Transgly_assoc	40.20
PF00072	Response_reg	2.94
PF05532	CsbD	1.96
PF13419	HAD_2	1.96
PF14014	DUF4230	0.98
PF13495	Phage_int_SAM_4	0.98
PF01464	SLT	0.98
PF00198	2-oxoacid_dh	0.98
PF07963	N_methyl	0.98
PF02632	BioY	0.98
PF00069	Pkinase	0.98
PF01087	GalP_UDP_transf	0.98
PF00762	Ferrochelatase	0.98
PF00180	Iso_dh	0.98
PF00589	Phage_integrase	0.98
PF01048	PNP_UDP_1	0.98
PF01842	ACT	0.98
PF02233	PNTB	0.98
PF13620	CarboxypepD_reg	0.98
PF13545	HTH_Crp_2	0.98
PF13435	Cytochrome_C554	0.98
PF00912	Transgly	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	40.20
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.92
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.96
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	0.98
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.98
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.98
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.98
COG1268	Biotin transporter BioY	Coenzyme transport and metabolism [H]	0.98
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.98
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.98
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.98
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.45 %
Unclassified	root	N/A	15.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.63 %
Unclassified	root	N/A	15.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.69 %
Unclassified	root	N/A	15.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.94 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.69 %
Unclassified	root	N/A	15.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.94 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2.94 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.98 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.98 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	2.94 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.98 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.98 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2.94 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.98 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.98 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10163942	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300001137\|JGI12637J13337_1005181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1089	Open in IMG/M
3300001546\|JGI12659J15293_10004246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4270	Open in IMG/M
3300001593\|JGI12635J15846_10022959	All Organisms → cellular organisms → Bacteria	5093	Open in IMG/M
3300002245\|JGIcombinedJ26739_101267712	Not Available	627	Open in IMG/M
3300004091\|Ga0062387_101504814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300004104\|Ga0058891_1012313	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300004121\|Ga0058882_1451057	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004140\|Ga0058894_1479979	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300004152\|Ga0062386_101717093	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300004631\|Ga0058899_11729664	Not Available	606	Open in IMG/M
3300004631\|Ga0058899_12140684	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300004631\|Ga0058899_12259220	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300004635\|Ga0062388_100818646	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005445\|Ga0070708_100126781	All Organisms → cellular organisms → Bacteria → Acidobacteria	2360	Open in IMG/M
3300005445\|Ga0070708_100450310	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005445\|Ga0070708_101423842	Not Available	646	Open in IMG/M
3300005468\|Ga0070707_100325545	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300005468\|Ga0070707_100469519	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300005591\|Ga0070761_10000198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	39318	Open in IMG/M
3300005591\|Ga0070761_10013084	All Organisms → cellular organisms → Bacteria	4645	Open in IMG/M
3300005591\|Ga0070761_10684139	Not Available	641	Open in IMG/M
3300005602\|Ga0070762_10980606	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005610\|Ga0070763_10605691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300005921\|Ga0070766_10011350	All Organisms → cellular organisms → Bacteria → Acidobacteria	4577	Open in IMG/M
3300005921\|Ga0070766_10093137	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300006041\|Ga0075023_100502497	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300006052\|Ga0075029_100210979	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300006057\|Ga0075026_100532891	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006893\|Ga0073928_10004009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22386	Open in IMG/M
3300009764\|Ga0116134_1027512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2273	Open in IMG/M
3300009824\|Ga0116219_10659804	Not Available	573	Open in IMG/M
3300010339\|Ga0074046_10001450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21415	Open in IMG/M
3300010339\|Ga0074046_10254856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300010339\|Ga0074046_10536687	Not Available	696	Open in IMG/M
3300010379\|Ga0136449_100134321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4917	Open in IMG/M
3300010858\|Ga0126345_1131058	Not Available	603	Open in IMG/M
3300011120\|Ga0150983_10996276	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300011120\|Ga0150983_11570995	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300011120\|Ga0150983_11697563	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300011120\|Ga0150983_13485074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1306	Open in IMG/M
3300011120\|Ga0150983_15428350	Not Available	657	Open in IMG/M
3300011120\|Ga0150983_15614155	Not Available	516	Open in IMG/M
3300014156\|Ga0181518_10542835	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300014162\|Ga0181538_10299767	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300014164\|Ga0181532_10015721	All Organisms → cellular organisms → Bacteria	5663	Open in IMG/M
3300014168\|Ga0181534_10415963	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300014658\|Ga0181519_10189895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1297	Open in IMG/M
3300015193\|Ga0167668_1001121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5464	Open in IMG/M
3300015193\|Ga0167668_1046690	Not Available	916	Open in IMG/M
3300015195\|Ga0167658_1019555	All Organisms → cellular organisms → Bacteria → Acidobacteria	1910	Open in IMG/M
3300016702\|Ga0181511_1320052	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300016702\|Ga0181511_1345864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300017946\|Ga0187879_10246088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M
3300017948\|Ga0187847_10003679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11579	Open in IMG/M
3300018016\|Ga0187880_1350487	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300018034\|Ga0187863_10870348	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300018040\|Ga0187862_10363499	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300018047\|Ga0187859_10085074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1664	Open in IMG/M
3300019887\|Ga0193729_1015942	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300020579\|Ga0210407_10049630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3132	Open in IMG/M
3300020579\|Ga0210407_10053833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3007	Open in IMG/M
3300020580\|Ga0210403_11106962	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300020581\|Ga0210399_10038338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3836	Open in IMG/M
3300020581\|Ga0210399_10374641	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300020581\|Ga0210399_10867212	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300021171\|Ga0210405_10021882	All Organisms → cellular organisms → Bacteria	5179	Open in IMG/M
3300021171\|Ga0210405_10422259	Not Available	1049	Open in IMG/M
3300021181\|Ga0210388_10183299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1828	Open in IMG/M
3300021432\|Ga0210384_10247423	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300021477\|Ga0210398_10023037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5288	Open in IMG/M
3300021478\|Ga0210402_10120586	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2370	Open in IMG/M
3300021479\|Ga0210410_10008125	All Organisms → cellular organisms → Bacteria	9070	Open in IMG/M
3300022557\|Ga0212123_10003022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	36982	Open in IMG/M
3300025922\|Ga0207646_11228860	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300027535\|Ga0209734_1002280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3267	Open in IMG/M
3300027537\|Ga0209419_1125132	Not Available	513	Open in IMG/M
3300027562\|Ga0209735_1141809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	522	Open in IMG/M
3300027565\|Ga0209219_1036980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1217	Open in IMG/M
3300027587\|Ga0209220_1068658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	940	Open in IMG/M
3300027629\|Ga0209422_1073831	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300027648\|Ga0209420_1034685	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300027660\|Ga0209736_1002242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6390	Open in IMG/M
3300027674\|Ga0209118_1028909	Not Available	1712	Open in IMG/M
3300027674\|Ga0209118_1074370	Not Available	977	Open in IMG/M
3300027812\|Ga0209656_10359165	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300027824\|Ga0209040_10182364	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300027853\|Ga0209274_10000588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20801	Open in IMG/M
3300027853\|Ga0209274_10336345	Not Available	777	Open in IMG/M
3300027853\|Ga0209274_10565016	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027854\|Ga0209517_10070644	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300027884\|Ga0209275_10540427	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300027905\|Ga0209415_10373363	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027911\|Ga0209698_10045864	All Organisms → cellular organisms → Bacteria	3867	Open in IMG/M
3300028651\|Ga0302171_10033786	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300028906\|Ga0308309_10277268	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300030294\|Ga0311349_11196117	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300030800\|Ga0074032_10847477	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031525\|Ga0302326_13704101	Not Available	503	Open in IMG/M
3300031708\|Ga0310686_103133063	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031902\|Ga0302322_101722435	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032756\|Ga0315742_11624405	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Aquatic	Environmental → Aquatic	24.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.57%
Freshwater	Environmental → Aquatic → Freshwater	18.63%
Sediment	Environmental → Aquatic → Sediment	3.92%
Peat	Environmental → Terrestrial → Peat	3.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	43.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	37.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	25.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.94%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030800	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101639422	3300000567	Peatlands Soil	MSEHFERWKELATRCLGEQDPAKLTELAHEMNLVLTQKTPYLDLPLHAAGLREEGQRDVLKTNGEGKVCFT*
JGI12637J13337_10051811	3300001137	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELAAEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKVCFT*
JGI12659J15293_100042466	3300001546	Forest Soil	VSQALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNAEGKACFT*
JGI12635J15846_100229595	3300001593	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKVCFT*
JGIcombinedJ26739_1012677123	3300002245	Forest Soil	VSKNFERWKELAALAVREQDPAKLTELATEMNLVLNQKTPHLVSPLHDDVLQANAGGKVCFT*
Ga0062387_1015048141	3300004091	Bog Forest Soil	VSKTFERWRELASLTSREQDPAKLTELAHEMNLVLTEKTPHLDPLLHGSHEDGQRTLKANLEGKVCFT*
Ga0058891_10123132	3300004104	Forest Soil	VSKTFERWKELAARCLGEQDPAKLIELANEMNLVLAQKTPHLDPPLRAAGSNEEDQRDILKADAEGKVCFT*
Ga0058882_14510573	3300004121	Forest Soil	LAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT*
Ga0058894_14799791	3300004140	Forest Soil	LAAQCCGEQDPAKLTELANEMNLILAQKTPYLDPSFHAAVSHQEGERDVLKANPEGEVCFT*
Ga0062386_1017170932	3300004152	Bog Forest Soil	SSGPTLRFIRNQDYMSKNFERWKELAAMCRSEQDPAKLTELANEMNFVLTQKTPHLDPRLLAVGSHEEGQRDPLKANAEGKVCFT*
Ga0058899_117296642	3300004631	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLRAPTSGSHEESQLVLKANAGGKVCFT*
Ga0058899_121406841	3300004631	Forest Soil	VSKQFERWKELAARCRGEQDPAKLTELANEINIVLTQKTPHLDPPRHAAGPHEEGERDVLKEKAEGKICFT*
Ga0058899_122592201	3300004631	Forest Soil	FERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNAEGKACFT*
Ga0062388_1008186462	3300004635	Bog Forest Soil	VSKKFERWKELAARCLEEQDPAKLTELANEMNLVLTEKTPRFDPPLLALGPQEERQRGVQKANAEDKVCFA*
Ga0070708_1001267813	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSKKFERWKKLAARCFGEQDPAKLTEPANEMNLVLTQKTPHLDPPLHAERSHEEGQRDVPKANAEGKVCFT*
Ga0070708_1004503102	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSEKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHLDPPLHTEGSHEEGQRNVLKANAEGKVCFT*
Ga0070708_1014238422	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSKNFERWKELAAQCLGERDPAKLTELATEMNLILNQKTSNLVSPLHDDVLKANAGGKVCFT*
Ga0070707_1003255452	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSEKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHLDPPLHPEGSHEEGQRNVLKANAEGKVCFT*
Ga0070707_1004695192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSKKFERWKKLAARCLGEQDPAKLTEPANEMNLVLTQKTPHLDPPLHAERSHEEGQRDVPKANAKGKVCFT*
Ga0070761_100001985	3300005591	Soil	MSKQFEQWKELAARCLGEQDPAKLTELASEMNRVLTQKTLHLDPPLHAASSHEEGQRDVLKTNAGGKVCFT*
Ga0070761_100130842	3300005591	Soil	LAAQCLCEQDPARLTELANEMNLVLTQKNTVVDPPLHEAGLREERQRDVLKANTGGKVCFT*
Ga0070761_106841391	3300005591	Soil	VSKKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTAHLDALVHAAGSHEEGQGDVLKANAEGKVCFT*
Ga0070762_109806061	3300005602	Soil	MSKNFERWKELAARCLGEQDPAKLTELAKEMNLILAQKKPPLHAAGPHEEGKRDVLKPNDEGKVCFT*
Ga0070763_106056912	3300005610	Soil	MSKNFERWKELSTRCLGEQDPAKLTELASEMNLLLTQKTPYLDAPQYAAELHEDGQRDALKASAEGELCFT*
Ga0070766_100113503	3300005921	Soil	VPGRVSQALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT*
Ga0070766_100931371	3300005921	Soil	LRLGERPKLCRIKRNQDYVSKNFERWKELAARCLGEQDPAKLTELAKEMNLILAQKKPPLHAAGPHEEGKRDVLKPNDEGKVCFT*
Ga0075023_1005024971	3300006041	Watersheds	VSKKFERWKELAARCLGEQDPAKLTELANEMNLVLNQKTQHLDPPLHPAGSHENGKRDVLKEKAEGKI
Ga0075029_1002109792	3300006052	Watersheds	MWSILDRRLFSSGPTLFIQRNQDYLSKRFERWKELASLTSREQDPVKLTELAHEINLVLTQKIPYLVPPLHAAGSREEGQRDVPKANTEGKVCFT*
Ga0075026_1005328912	3300006057	Watersheds	VSQEFERWKEFAARCFGQQDPAKLRELASEMNFVLTQKTPHLDPPLHAGAHEEGQHDVLKAEVEGKVCFT*
Ga0073928_1000400924	3300006893	Iron-Sulfur Acid Spring	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKGCFT*
Ga0116134_10275121	3300009764	Peatland	VSKEFERWKELAARCLGEQDSAKLTELASEMNLVLTQKTPHLDPRLHTAGSHEEGQRDVLKANAEGKVCFT*
Ga0116219_106598041	3300009824	Peatlands Soil	MSEHFERWKELATRCLGEQDPAKLTELAHEMNLVLTQKTPYLDLPLHAAGLREEGQRDVL
Ga0074046_1000145010	3300010339	Bog Forest Soil	MSKKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHIDPPLQAAGSHEERQHDVVKAKAEGKVCFT*
Ga0074046_102548562	3300010339	Bog Forest Soil	MSKNFERWKELAAMCRSEQDPAKLTELANEMNFVLTQKTPHLDPRLLAVGSHEEGQRDPLKANAEGKVCFT*
Ga0074046_105366872	3300010339	Bog Forest Soil	MSKKFERWKELASLTSREQDPVKLTELAHEINLVPNHKIPYLDPPLHAAGPHEEGQRDILKANMKGKICFT*
Ga0136449_1001343213	3300010379	Peatlands Soil	MRNQDYVSKKFERWKELASLTSREQDPAKLTELAHEINLVLTQKIPHLPTQKVPHLDPPLQAAGSHEEGQRDVLKANTEGKVCFT*
Ga0126345_11310582	3300010858	Boreal Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHVDPPLHAPSSGSHEESQLVLKANAGGKVCFT*
Ga0150983_109962763	3300011120	Forest Soil	VSKQFERWKELAARCRGEQDPAKLTELANEINLVLAQKTPHLDPPRHAAGPHEEGKRDVLKAKAEGKICFT*
Ga0150983_115709951	3300011120	Forest Soil	QDYMSKNFERWKELSTRCLGEQDPAKLTELASEMNLLLTQKTPYLDAPQYAAELHEDGQRDALKASAEGELCFT*
Ga0150983_116975632	3300011120	Forest Soil	ERWKELAARCRGEQDPAKLTELANEINIVLTQKTPHLDPPRHAAGPHEEGERDVLKEKAEGKICFT*
Ga0150983_134850743	3300011120	Forest Soil	KQDYVSKTFERWKELAARCLGEQDPAKLTELAKEMNLILAQKKPPLHAAGSHEEGKRDVLKPNDEGKVCFT*
Ga0150983_154283501	3300011120	Forest Soil	VSKNFERWKELATLTSKEQDSAKLTELAKEMNLVLTQKTPYLVLTQKTPYPDAPLRAPAEGSNEESQLGDVLEATAGGKVCFT*
Ga0150983_156141551	3300011120	Forest Soil	VSKNFERWKELATLTSQEQDPAKLTELATEMNLVLNQKTPHVVSPLHDDVLTANAGGKVFFT*
Ga0181518_105428351	3300014156	Bog	PKICRIERNQDYMSKNFERWKELAARCLGEQDPAKLTELASEMNRVLAQKIPHFDPPLQAAGSHEEGQRDFLKANAGGKVCFT*
Ga0181538_102997672	3300014162	Bog	MSKKFERWKELAARCLGEQDPAKLAELANEMNLVLTQKTPHIDPPLQAAGSHEERQHDVVKAKAEGKVCFT*
Ga0181532_100157211	3300014164	Bog	VSKKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHPDLPLHAAGLHHEEGQGDVLKANAEGKVCFT*
Ga0181534_104159631	3300014168	Bog	KELAARCLGEQDPAKLTELAAEMNLVLADKVPTQKTPCPDPAPRAAGPHEENQRGGPNANPGGKVCFT*
Ga0181519_101898953	3300014658	Bog	SKKLERWKELAARCLGEQDPAKLTELAAEMNLVLADKVPTQKTPCPDPAPRAAGPHEENQRGGPNANPGGKVCFT*
Ga0167668_10011212	3300015193	Glacier Forefield Soil	VSKNFERWKELAALCLGERDPAKLTELANEINLVLTQKTPHLDPPLHAPSPAAGSHEESQLDDVLKANAEGKICFT*
Ga0167668_10466901	3300015193	Glacier Forefield Soil	LTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESELVLKENAGDKVCFT*
Ga0167658_10195553	3300015195	Glacier Forefield Soil	MSKNLERWKELADRCLGEQDPAKLAELAGEMNLVLTQKTPYLDPPLHVAGSHGAAQRDVLKSNAEDKVCFT*
Ga0181511_13200522	3300016702	Peatland	RIERNQDYMSKNFERWKELAARCLGEQDPAKLTELANEMNLMLTPKTPYAAGSHEEGQGDVLKTNNEGEICFT
Ga0181511_13458642	3300016702	Peatland	VSKHFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHPDLPLHAAGLHHEEGQGDVLKANAEGKVCFT
Ga0187879_102460882	3300017946	Peatland	VSKRFERWKELASLASREQDPAKLTELAHEINLVLTQEIPYLDPPESHEEGQRDVLKANAEGKVCFT
Ga0187847_1000367915	3300017948	Peatland	VSTKFERWKELAARCLDEQNPAKLTELASEMNLVLAEKTPRLNLPLHATAGSQGEVQRDVLNANAEGKVCFT
Ga0187880_13504872	3300018016	Peatland	VSKEFERWKELAARCLGEQDSAKLTELASEMNLVLTQKTPHLDPRLHTAGSHEEGQRDVLKANAEGKVCFT
Ga0187863_108703481	3300018034	Peatland	TKFERWKELAARCLDEQNPAKLTELASEMNLVLAEKTPRLNLPLHATVGSQEEEQRDVLKANAEGKVCFT
Ga0187862_103634991	3300018040	Peatland	LAARCLGEQDPEKLTELANEMNFVLTQKTPCLDLPPHAAGSHEEGQRDVLKPNAEG
Ga0187859_100850742	3300018047	Peatland	VSTKFERWKELAARCLDEQNPAKLTELASEMNLVLAEKTPRLNLPLHATAGSLEEEQRDVLKANAEGKVCFT
Ga0193729_10159422	3300019887	Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKTPHLVSPLHASPLHATAAGSHEESQLVLKANAGGKVCFT
Ga0210407_100496302	3300020579	Soil	VSKNFERWKELATLTSQEQDPAKLTELATEMNLVLNQKTPHVVSPLHDDVLTANAGGKVFFT
Ga0210407_100538331	3300020579	Soil	VSKNFERWKELATLTSKEQDSAKLTELAKEMNLVLTQKTPYLVLTQKTPYPDAPLRAPAEGSNEESQLGDVLEATAGGKVCFT
Ga0210403_111069621	3300020580	Soil	VSKNFERWKELAAQCCGEQDPAKLTELANEMNLILAQKTPYLDPSFHAAVSHEEGERDILKANPEGKVCFT
Ga0210399_100383382	3300020581	Soil	VSKNFERWKELATLTCQEQDPAKLTELATEMNLVLNQKTPHVASPLHDDVLTANAGGKVFFT
Ga0210399_103746412	3300020581	Soil	VSKNFERWKELAAQCCGEQDPAKLTELANEMNLILAQKTPYLDPSFHAAVSHQEGERDVLKANPEGEVCFT
Ga0210399_108672122	3300020581	Soil	VSQEFERWKEFAARCFGQQDPAKLRELASEMNFVLTQKTPHLDPPLHAGAHEEGQHDVLKAEVEGKVCFT
Ga0210405_1002188211	3300021171	Soil	VSQALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNAEGKACFT
Ga0210405_104222591	3300021171	Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLRAPTSGSHEESQLVLKANAGGKVCFT
Ga0210388_101832992	3300021181	Soil	MRIMSKHFERWKELAALASKEQDPATLTELAHEMNFVLTQKTPYIPQARAAGPREAGQRDVLKANTEGKVCFI
Ga0210384_102474233	3300021432	Soil	VSKTFERWKELAARCLGEQDPAKLIELANEMNLVLAQKTPHLDPPLHVAGSNEEDQRDVLKADAEGKVCFT
Ga0210398_100230375	3300021477	Soil	MSKNFERWKELSTRCLGEQDPAKLTELASEMNLLLTQKTPYLDAPQYAAELHEDGQRDALKASAEGELCFT
Ga0210402_101205865	3300021478	Soil	VSKNFERWKELAAQCCGEQDPAKLTELANEMNLILAQKTPYLDPSFHAAVSHEEGERDVLKANPEGKVCFT
Ga0210410_1000812511	3300021479	Soil	VSKTFERWKELAARCLGEQDPAKLIELANEMNLVLAQKTPHLDPPLRAAGSNEEDQRDILKADAEGKVCFT
Ga0212123_1000302236	3300022557	Iron-Sulfur Acid Spring	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKGCFT
Ga0207646_112288601	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ERWKELAARCLGEQDPAKLTELANEMNLVLTQKTPHLDPPLHPEGSHEEGQRNVLKANAEGKVCFT
Ga0209734_10022806	3300027535	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHVDPPLHAPSSGSHEESQLVLKANAGGKVCFT
Ga0209419_11251322	3300027537	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHVDPPLHAPSSGSHEESQLVLKANAGDKVCFT
Ga0209735_11418091	3300027562	Forest Soil	LRNFERWKELAAQCLVEQDSAKLTELANEMNLVLTQKTPQLDPPLHATAAGSHEESHLDDVLETNAGGKVCFT
Ga0209219_10369802	3300027565	Forest Soil	VSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKVCFT
Ga0209220_10686581	3300027587	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKVCFT
Ga0209422_10738312	3300027629	Forest Soil	VSKNFERWKELAALAVREQDPAKLTELATEMNLVLNQKTPHLVSPLHDDVLQANAGGKVCFT
Ga0209420_10346853	3300027648	Forest Soil	MSKHFERWKELAALASKEQDPATLTELAHEMNFVLTQKTPYIPQARAAGPHEAGQRDVLKANPESKVCFI
Ga0209736_10022424	3300027660	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELAAEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAGGKVCFT
Ga0209118_10289092	3300027674	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELATEMNLVLNQKTSNLDPPLHATAAGSHEESQLVLKANAGGKVCFT
Ga0209118_10743701	3300027674	Forest Soil	MSKNFERWKELATLTSKEQDPAKLTELAAEMNLVLNQKPPHLDPPLHAPSSGSHEESQLVLKANAG
Ga0209656_103591652	3300027812	Bog Forest Soil	MSKNFERWKELAAMCRSEQDPAKLTELANEMNFVLTQKTPHLDPRLLAVGSHEEGQRDPLKANAEGKVCFT
Ga0209040_101823643	3300027824	Bog Forest Soil	VSKKFERWKELASLTSREQDPAKLTELAHEINLALTQKIPYLDPPLHAAGSREEGQRDVPKANTEGKVCFT
Ga0209274_100005887	3300027853	Soil	MSKQFEQWKELAARCLGEQDPAKLTELASEMNRVLTQKTLHLDPPLHAASSHEEGQRDVLKTNAGGKVCFT
Ga0209274_103363451	3300027853	Soil	VSKKFERWKELAARCLGEQDPAKLTELANEMNLVLTQKTAHLDALVHAAGSHEEGQGDVLKANAEGKVCFT
Ga0209274_105650162	3300027853	Soil	YVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNAEGKACFT
Ga0209517_100706443	3300027854	Peatlands Soil	MSEHFERWKELATRCLGEQDPAKLTELAHEMNLVLTQKTPYLDLPLHAAGLREEGQRDVLKTNGEGKVCFT
Ga0209275_105404271	3300027884	Soil	RVSRALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT
Ga0209415_103733632	3300027905	Peatlands Soil	MRNQDYVSKKFERWKELASLTSREQDPAKLTELAHEINLVLTQKIPHLPTQKVPHLDPPLQAAGSHEEGQRDVLKANTEGKVCFT
Ga0209698_100458644	3300027911	Watersheds	MWSILDRRLFSSGPTLFIQRNQDYLSKRFERWKELASLTSREQDPVKLTELAHEINLVLTQKIPYLVPPLHAAGSREEGQRDVPKANTEGKVCFT
Ga0302171_100337863	3300028651	Fen	DRRLFSSGPSLSIQRNQDYVSKNFERWKELASLTSREQDPAKLTELAHEINLVLTQKIPYLDPPLHAAGSREEGQRDVPKANTEGKVCFT
Ga0308309_102772682	3300028906	Soil	MSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT
Ga0311349_111961172	3300030294	Fen	FQQPPSLSIQRNQDYVSKNFERWKELASLTSREQDPAKLTELAHEINLVLTQKIPYLDPPLHAAGSREEGQRDVPKANTEGKVCFT
Ga0074032_108474772	3300030800	Soil	GKVVPGRVSRALCIERNQDYVSRNFERWKELAARCLGEQDLGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT
Ga0302326_137041011	3300031525	Palsa	MSKKFERWKELAARCLDEQDPAKLTELANEMNRVLIQKTPHLDPPLQAAGSREESQSSMKTSPNYPQSH
Ga0310686_1031330631	3300031708	Soil	PGRVSQALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNAEGKACFT
Ga0302322_1017224352	3300031902	Fen	SMWSILDRRLFSSGPSLSIQRNQDYVSKNFERWKELASLTSREQDPAKLTELAHEINLVLTQKIPYLDPPLHAAGSREEGQRDVPKANTEGKVCFT
Ga0315742_116244052	3300032756	Forest Soil	GKVVPGRVSRALCIERNQDYVSRNFERWKELAARCLGEQDPGKLTELANEMNLILTQKTPYLDPSLCAAGSHEESQRDVLKPNVEGKACFT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100522

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences