Basic Information | |
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Family ID | F100488 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 64 residues |
Representative Sequence | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Number of Associated Samples | 8 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Eukaryota |
% of genes with valid RBS motifs | 0.98 % |
% of genes near scaffold ends (potentially truncated) | 99.02 % |
% of genes from short scaffolds (< 2000 bps) | 22.55 % |
Associated GOLD sequencing projects | 6 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Eukaryota (87.255 % of family members) |
NCBI Taxonomy ID | 2759 |
Taxonomy | All Organisms → cellular organisms → Eukaryota |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules (56.863 % of family members) |
Environment Ontology (ENVO) | Unclassified (100.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (100.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.73% β-sheet: 7.46% Coil/Unstructured: 38.81% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Root Nodules Root Nodules |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0099822_100085745 | 3300006943 | Root Nodules | FLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFNTRWIWVWKWG* |
Ga0099822_10009191 | 3300006943 | Root Nodules | IILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMRKKFDTR* |
Ga0099822_10011421 | 3300006943 | Root Nodules | YFKVFGIEENPPNIEYFIILCFFYRNFFSFIKINIEVVRTRIWVRDYTCYLVGMGMRKKFDIR* |
Ga0099822_100125640 | 3300006943 | Root Nodules | FKVFGIEENPPNIEYFIILCFLYRNFFFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTR* |
Ga0099822_100731419 | 3300006943 | Root Nodules | FKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRARVWVRDYTRYPVGMGMGMGKKFDTRWVWVWGWG* |
Ga0099822_100852619 | 3300006943 | Root Nodules | NIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYLVGMGMGKKFDTRWIWVWGCG* |
Ga0099822_100930817 | 3300006943 | Root Nodules | IYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWG* |
Ga0099822_10105421 | 3300006943 | Root Nodules | TIIIYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVIRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWG* |
Ga0099822_101246122 | 3300006943 | Root Nodules | NVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTWVQVWVRDYTRYPVGMGMGKKFDTRWVWVWGCG* |
Ga0099822_101401915 | 3300006943 | Root Nodules | VFGIEENPPNIEYFIILCFLYCNFFSFIKINIEVVRTRVRVRDYTRYPVRMGMGKKFDTRWIWVWG* |
Ga0099822_101912612 | 3300006943 | Root Nodules | NIEYFIILCFLYHNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKRFDTRWVWVWG* |
Ga0099822_10195271 | 3300006943 | Root Nodules | ENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDSIRYPVGMGMGKKFDTRWIWVWG* |
Ga0099822_102227611 | 3300006943 | Root Nodules | YFKVFGIKENPPNIEYFIILCFLYRNFFSFIKINIEVVRTLVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG* |
Ga0099822_10261361 | 3300006943 | Root Nodules | TIIIYFKVFDIKETNTPNIEYLIILCFLYRNFYYFIKISYKINIKVVSKWVRVWVRDYTRYPVGMGMRQKFDTRWVWVWGWG* |
Ga0099822_10279479 | 3300006943 | Root Nodules | IILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMGKKFDTRWVWVWGWG* |
Ga0099822_102828410 | 3300006943 | Root Nodules | MEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVWVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG* |
Ga0099822_10308403 | 3300006943 | Root Nodules | VFDIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVRDYTRYPVGMGMRKKFDTRWV* |
Ga0099822_10479475 | 3300006943 | Root Nodules | FLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKCDTRWVWVWGWG* |
Ga0099822_10492302 | 3300006943 | Root Nodules | IEENPHNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVQDYTRYLVGMGMGKKFDTRWVWVWGWG* |
Ga0099822_10499821 | 3300006943 | Root Nodules | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVQDYTRYPVGMGMGKKFDTRWVWVWEWG* |
Ga0099822_10546892 | 3300006943 | Root Nodules | FIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGIGKKFDTRWVWVWGWG* |
Ga0099822_10641781 | 3300006943 | Root Nodules | PNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGKKFDTRWVWVWGWG |
Ga0099822_10646772 | 3300006943 | Root Nodules | KVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMRKKFDTRWVWVWGWR* |
Ga0099822_10648911 | 3300006943 | Root Nodules | YFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGTGMEKKFDTRWV* |
Ga0099822_10667844 | 3300006943 | Root Nodules | IEYFIILCFLYGNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWR |
Ga0099822_10795301 | 3300006943 | Root Nodules | YFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTQVRVWVRDYTRHPVRMGIGKKFDTR* |
Ga0099822_10837593 | 3300006943 | Root Nodules | YFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTCWVWVWGWG* |
Ga0099823_10284055 | 3300006944 | Root Nodules | VFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWV* |
Ga0099823_10440271 | 3300006944 | Root Nodules | NIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMRKKFDTR* |
Ga0099823_10648442 | 3300006944 | Root Nodules | LCFLYRNFFSFIKINIEVVRTRVRVWVQDYTRYLVGMGMGKKFDTRWVWVWGWG* |
Ga0099823_10704474 | 3300006944 | Root Nodules | SNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVCVRDYTRYPVGMGMGKKFDTRWIWVWGWG* |
Ga0099823_10894361 | 3300006944 | Root Nodules | NPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGKKFDTRWVWVWGWG* |
Ga0099823_11286831 | 3300006944 | Root Nodules | GIEKNPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYPVGMGMEKKFDTRWVWVWGWG* |
Ga0214544_100123627 | 3300021320 | Root Nodules | YFKVFGIEENPPNIEYFIILCFLYRNFFFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTR |
Ga0214544_10018021 | 3300021320 | Root Nodules | CFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFNTRWIWVWKWG |
Ga0214544_10028081 | 3300021320 | Root Nodules | IIYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214544_100368031 | 3300021320 | Root Nodules | FGIEENSPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVQDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214544_10037421 | 3300021320 | Root Nodules | IYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWV |
Ga0214544_10037801 | 3300021320 | Root Nodules | FIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMGKKFDTRWVWVWGWG |
Ga0214544_10059371 | 3300021320 | Root Nodules | IIYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWG |
Ga0214544_10066231 | 3300021320 | Root Nodules | YFKVFDIEENPPNIEYFIILCFLYRNFFSFIKINIKVVRTRVQVWVRDYTRYPVGMGMRRKFDTRWVWVWGWG |
Ga0214544_100739023 | 3300021320 | Root Nodules | FKVFGIKENPPNIEYFIILCFLYRNFFSFIKINSEVVRTRVRIWVRDYTRYPVGMGMGKKFDTRWV |
Ga0214544_10097889 | 3300021320 | Root Nodules | IYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRARVWVRDYTRYPVGMGMGMGKKFDTRWVWVWGWG |
Ga0214544_10114889 | 3300021320 | Root Nodules | IIYFKVFGIKENPPNIEYFIILCFLYRNFFSFIKINIEVVRTLVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214544_10124986 | 3300021320 | Root Nodules | IEENSPNIEYFIILCFLYHNFFSFIKINIEVVRTRVRIWVRGYTRYPVVMGMGKKFDTRWVWVWEWG |
Ga0214544_10133208 | 3300021320 | Root Nodules | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGKKFDTRWVWVWGWG |
Ga0214544_10136291 | 3300021320 | Root Nodules | FDIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVQDYTRYPVGMGMGKKFDTRWVWVWEWG |
Ga0214544_10159593 | 3300021320 | Root Nodules | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDSIRYPVGMGMGKKFDTRWIWVWG |
Ga0214544_10200554 | 3300021320 | Root Nodules | NIEYFIILCFLYGNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGW |
Ga0214544_10203941 | 3300021320 | Root Nodules | IEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYLVGMGMGKKFDTRWIWVWGCG |
Ga0214544_10214401 | 3300021320 | Root Nodules | LYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTHWVWVWGWG |
Ga0214544_10247672 | 3300021320 | Root Nodules | VFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214544_10266403 | 3300021320 | Root Nodules | VFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWIRDYTRYPVGMGMGKKFDTRWV |
Ga0214544_10305111 | 3300021320 | Root Nodules | LCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKCDTRWVWVWGWG |
Ga0214544_10410581 | 3300021320 | Root Nodules | PPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMRKKFDTRWVWVWGWR |
Ga0214542_100006898 | 3300021321 | Root Nodules | FKVFDIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVRDYTRYPVGMGMRKKFDTRWV |
Ga0214542_100326227 | 3300021321 | Root Nodules | FGIEENPPNIEYFIILCFFYRNFFSFIKINIEVVRTRIWVRDYTCYLVGMGMRKKFDIR |
Ga0214542_10035551 | 3300021321 | Root Nodules | PPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMRKKFDTR |
Ga0214542_100477721 | 3300021321 | Root Nodules | NIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVRMGMGKKFDTRWVWVWDGDEFFMRR |
Ga0214542_100754717 | 3300021321 | Root Nodules | YFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVWVWVRDYTRYPVRMGMGKKFDTRWVWVWGWG |
Ga0214542_100872814 | 3300021321 | Root Nodules | ENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTCYPVGMGMGKKFDTRWV |
Ga0214542_10158145 | 3300021321 | Root Nodules | EENPPNIEYFIILCFFYRNFFSFIKINIEVVRTRVRVWVRDYIRYPVGMGMGKKFDTRWV |
Ga0214542_10208491 | 3300021321 | Root Nodules | EYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYLVGMGMGKKFDTRWIWVWGCG |
Ga0214542_10287792 | 3300021321 | Root Nodules | EYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMRKKFDTRWVWVWGWR |
Ga0214542_10309031 | 3300021321 | Root Nodules | ENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYPVGMGMGKKFDTHWVWVWGWG |
Ga0214542_10320611 | 3300021321 | Root Nodules | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDIRWVWVWGWG |
Ga0214542_10438071 | 3300021321 | Root Nodules | IIYFKVFGIKENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214545_100119135 | 3300021324 | Root Nodules | EYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMEMGKKFDTRWVWVWGWG |
Ga0214545_10028591 | 3300021324 | Root Nodules | EENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVQDYTRYPVGMGMGKKFDTRWVWVWEWG |
Ga0214545_100823220 | 3300021324 | Root Nodules | YFNVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTWVQVWVRDYTRYPVGMGMGKKFDTRWVWVWGCG |
Ga0214545_10083191 | 3300021324 | Root Nodules | IEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYNRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214545_10289333 | 3300021324 | Root Nodules | IYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWIRDYTRYPVGMGMGKKFDTRWV |
Ga0214543_101089212 | 3300021327 | Root Nodules | PPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYLVGMGMGKKFDTRWIWVWGCG |
Ga0214543_10174204 | 3300021327 | Root Nodules | IIYFKVFGIKENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGTGMEKKFDTRWV |
Ga0214543_10180072 | 3300021327 | Root Nodules | IYFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRIRVWVRDYTRYPVGMGMGKKFDTRWVWVWRWG |
Ga0214543_10272401 | 3300021327 | Root Nodules | YFKVFDIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVWVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0214543_10315381 | 3300021327 | Root Nodules | FLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDIRWVWVWGWG |
Ga0209389_10020931 | 3300027296 | Root Nodules | YFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMEMGKKFDTRWVWVWGWG |
Ga0209389_10082641 | 3300027296 | Root Nodules | LCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWE |
Ga0209389_10202021 | 3300027296 | Root Nodules | IKENPPNIEYFIILCFLYRNFFSFIKINIEVVRTLVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0209389_10259561 | 3300027296 | Root Nodules | IILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWG |
Ga0209389_10291391 | 3300027296 | Root Nodules | PNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYLVGMGMGKKFDTRWIWVWGCG |
Ga0209389_10378171 | 3300027296 | Root Nodules | GIEENPPNIEYFIILCFLYRNFFSFIKINIEVIRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWG |
Ga0209389_10444402 | 3300027296 | Root Nodules | IEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0209389_10603492 | 3300027296 | Root Nodules | YFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRARVWVRDYTRYPVGMGMGMGKKFDTRWVWVWGWG |
Ga0209389_10607921 | 3300027296 | Root Nodules | TIIIYFKVFDIEENPPNIEYFIILCFLYRNFFFFIKINIEVVRTRVRVRVRDYTRYPVEMRMGKKFDTRWIWV |
Ga0209389_10999671 | 3300027296 | Root Nodules | ENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGKKFDTRWVWVWGWG |
Ga0209389_11073481 | 3300027296 | Root Nodules | VFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWV |
Ga0209389_11083311 | 3300027296 | Root Nodules | LYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDIRWVWVWGWG |
Ga0209389_11123791 | 3300027296 | Root Nodules | GIEKNPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYPVGMGMEKKFDTRWVWVWGWG |
Ga0209589_100062039 | 3300027357 | Root Nodules | CFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKCDTRWVWVWGWG |
Ga0209589_100269623 | 3300027357 | Root Nodules | PNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYLVGMGMGKKFDTRWVWVWGWG |
Ga0209589_100374812 | 3300027357 | Root Nodules | FKVFGIEENSPNIEYFIILCFLYHNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMRMGKKFDTRWVWVWRWG |
Ga0209589_100488125 | 3300027357 | Root Nodules | FNVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTWVQVWVRDYTRYPVGMGMGKKFDTRWVWVWGCG |
Ga0209589_10070691 | 3300027357 | Root Nodules | DIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRIWVQDYTRYPVGMGMGKKFDTRWVWVWEWG |
Ga0209589_10170381 | 3300027357 | Root Nodules | NIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVRMGMGKKFDTRWVWVWGW |
Ga0209589_10187446 | 3300027357 | Root Nodules | CFLYHNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKRFDTRWVWVWG |
Ga0209589_10275165 | 3300027357 | Root Nodules | PPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYIRYPVGMGMGKKFDTRWIWVWGWG |
Ga0209589_10279985 | 3300027357 | Root Nodules | IIYFKVFDIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0209589_10307281 | 3300027357 | Root Nodules | YFKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVWVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
Ga0209589_10336801 | 3300027357 | Root Nodules | FKVFGIEENPPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMRKKFDTRWVWVWGWR |
Ga0209589_10620622 | 3300027357 | Root Nodules | PPNIEYFIILCFLYRNFFSFIKINIEVVRTRVRVWVRDYTRYPVGMGMGKKFDTRWVWVWGWG |
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