Metagenome Family F100485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100485
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MLVIDDLDEATFERAGALVAREHAAARRVRPELPAGFGSAGVCAAALQRLCDSGHRGLVAADNGRTVAVMTAT
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.00 %
% of genes near scaffold ends (potentially truncated)	92.16 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.804 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.549 % of family members)
Environment Ontology (ENVO)	Unclassified (13.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.66% β-sheet: 3.96% Coil/Unstructured: 62.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02566	OsmC	5.88
PF02635	DrsE	1.96
PF00571	CBS	1.96
PF01522	Polysacc_deac_1	1.96
PF00027	cNMP_binding	1.96
PF04978	DUF664	1.96
PF06463	Mob_synth_C	0.98
PF12867	DinB_2	0.98
PF01987	AIM24	0.98
PF04116	FA_hydroxylase	0.98
PF01083	Cutinase	0.98
PF12006	DUF3500	0.98
PF13601	HTH_34	0.98
PF12697	Abhydrolase_6	0.98
PF12840	HTH_20	0.98
PF13683	rve_3	0.98
PF13508	Acetyltransf_7	0.98
PF13271	DUF4062	0.98
PF00872	Transposase_mut	0.98
PF13302	Acetyltransf_3	0.98
PF00011	HSP20	0.98
PF04542	Sigma70_r2	0.98
PF00583	Acetyltransf_1	0.98
PF01979	Amidohydro_1	0.98
PF00196	GerE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	5.88
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	5.88
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.96
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.98
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.98
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	0.98
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.98
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.98
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.98
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
All Organisms	root	All Organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
cellular organisms	root	All Organisms → cellular organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.94 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.96 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.98 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.96 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.98 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.98 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.98 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.96 %
Kibdelosporangium banguiense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium banguiense	0.98 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.98 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	0.98 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.98 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.96 %
Amycolatopsis sp. FDAARGOS 1241	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	0.98 %
Kibdelosporangium banguiense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium banguiense	0.98 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.98 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	0.98 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10821016	Not Available	532	Open in IMG/M
3300003505\|JGIcombinedJ51221_10202612	Not Available	805	Open in IMG/M
3300004092\|Ga0062389_102486580	Not Available	687	Open in IMG/M
3300004092\|Ga0062389_104449448	Not Available	527	Open in IMG/M
3300004092\|Ga0062389_104515726	Not Available	524	Open in IMG/M
3300004479\|Ga0062595_101573947	Not Available	611	Open in IMG/M
3300005435\|Ga0070714_100430479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1251	Open in IMG/M
3300005439\|Ga0070711_100270539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1340	Open in IMG/M
3300005439\|Ga0070711_101117284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300005439\|Ga0070711_101323621	Not Available	625	Open in IMG/M
3300005468\|Ga0070707_101539879	Not Available	632	Open in IMG/M
3300005591\|Ga0070761_11114267	Not Available	503	Open in IMG/M
3300005952\|Ga0080026_10019946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1627	Open in IMG/M
3300006028\|Ga0070717_10191406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1787	Open in IMG/M
3300006028\|Ga0070717_10522031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1074	Open in IMG/M
3300006028\|Ga0070717_11422970	Not Available	629	Open in IMG/M
3300006954\|Ga0079219_10637956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300009698\|Ga0116216_10476433	Not Available	755	Open in IMG/M
3300010373\|Ga0134128_11497030	Not Available	743	Open in IMG/M
3300010379\|Ga0136449_100201699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	3782	Open in IMG/M
3300010379\|Ga0136449_100871818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	1473	Open in IMG/M
3300010379\|Ga0136449_102302087	Not Available	781	Open in IMG/M
3300012201\|Ga0137365_10029238	All Organisms → cellular organisms → Bacteria	4242	Open in IMG/M
3300012923\|Ga0137359_11627914	Not Available	533	Open in IMG/M
3300014655\|Ga0181516_10221779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	960	Open in IMG/M
3300016445\|Ga0182038_11635120	Not Available	580	Open in IMG/M
3300016445\|Ga0182038_12200232	Not Available	500	Open in IMG/M
3300017821\|Ga0187812_1068248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1182	Open in IMG/M
3300017823\|Ga0187818_10085948	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1358	Open in IMG/M
3300017924\|Ga0187820_1052896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300017926\|Ga0187807_1028828	Not Available	1718	Open in IMG/M
3300017928\|Ga0187806_1200991	Not Available	675	Open in IMG/M
3300017932\|Ga0187814_10051764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium banguiense	1512	Open in IMG/M
3300017943\|Ga0187819_10130405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1499	Open in IMG/M
3300017961\|Ga0187778_10717050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	677	Open in IMG/M
3300017973\|Ga0187780_10815145	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300017974\|Ga0187777_11473581	Not Available	504	Open in IMG/M
3300017975\|Ga0187782_11423366	Not Available	545	Open in IMG/M
3300018058\|Ga0187766_10392784	Not Available	916	Open in IMG/M
3300018085\|Ga0187772_11454953	Not Available	509	Open in IMG/M
3300019789\|Ga0137408_1303477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2692	Open in IMG/M
3300019890\|Ga0193728_1310308	Not Available	592	Open in IMG/M
3300020581\|Ga0210399_11470603	Not Available	530	Open in IMG/M
3300020582\|Ga0210395_10005804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9414	Open in IMG/M
3300020582\|Ga0210395_10507399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300020583\|Ga0210401_10653535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912	Open in IMG/M
3300020583\|Ga0210401_10848904	Not Available	772	Open in IMG/M
3300021180\|Ga0210396_11697583	Not Available	513	Open in IMG/M
3300021402\|Ga0210385_10353545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300021404\|Ga0210389_11368947	Not Available	541	Open in IMG/M
3300021406\|Ga0210386_11031131	Not Available	700	Open in IMG/M
3300021406\|Ga0210386_11511588	Not Available	559	Open in IMG/M
3300021432\|Ga0210384_10099300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2611	Open in IMG/M
3300021474\|Ga0210390_11592581	Not Available	514	Open in IMG/M
3300021479\|Ga0210410_10179248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1894	Open in IMG/M
3300021479\|Ga0210410_11016299	Not Available	718	Open in IMG/M
3300022840\|Ga0224549_1034377	Not Available	688	Open in IMG/M
3300025527\|Ga0208714_1046216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300025916\|Ga0207663_11247745	Not Available	599	Open in IMG/M
3300025929\|Ga0207664_10415743	Not Available	1197	Open in IMG/M
3300026217\|Ga0209871_1055569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300027096\|Ga0208099_1037950	Not Available	691	Open in IMG/M
3300027168\|Ga0208239_1002297	Not Available	1449	Open in IMG/M
3300027297\|Ga0208241_1045507	Not Available	692	Open in IMG/M
3300027680\|Ga0207826_1215824	Not Available	515	Open in IMG/M
3300027767\|Ga0209655_10051132	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300027768\|Ga0209772_10030827	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300028742\|Ga0302220_10106599	Not Available	1096	Open in IMG/M
3300028742\|Ga0302220_10363697	Not Available	521	Open in IMG/M
3300028773\|Ga0302234_10369927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300028773\|Ga0302234_10424972	Not Available	568	Open in IMG/M
3300028780\|Ga0302225_10114105	Not Available	1317	Open in IMG/M
3300028780\|Ga0302225_10620383	Not Available	500	Open in IMG/M
3300028808\|Ga0302228_10510638	Not Available	529	Open in IMG/M
3300028863\|Ga0302218_10218957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300029882\|Ga0311368_10639953	Not Available	743	Open in IMG/M
3300030058\|Ga0302179_10072203	Not Available	1533	Open in IMG/M
3300030399\|Ga0311353_10032284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5526	Open in IMG/M
3300030646\|Ga0302316_10405052	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031027\|Ga0302308_10111476	Not Available	1853	Open in IMG/M
3300031525\|Ga0302326_13625816	Not Available	510	Open in IMG/M
3300031543\|Ga0318516_10817258	Not Available	526	Open in IMG/M
3300031544\|Ga0318534_10746794	Not Available	551	Open in IMG/M
3300031549\|Ga0318571_10260787	Not Available	640	Open in IMG/M
3300031561\|Ga0318528_10542934	Not Available	624	Open in IMG/M
3300031744\|Ga0306918_11310264	Not Available	557	Open in IMG/M
3300031831\|Ga0318564_10146719	Not Available	1051	Open in IMG/M
3300031879\|Ga0306919_10996419	Not Available	641	Open in IMG/M
3300032001\|Ga0306922_11201872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300032008\|Ga0318562_10530173	Not Available	682	Open in IMG/M
3300032010\|Ga0318569_10299132	Not Available	749	Open in IMG/M
3300032041\|Ga0318549_10509526	Not Available	541	Open in IMG/M
3300032160\|Ga0311301_10019517	All Organisms → cellular organisms → Bacteria	19331	Open in IMG/M
3300032160\|Ga0311301_10451639	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300032783\|Ga0335079_10483724	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300032805\|Ga0335078_11633508	Not Available	711	Open in IMG/M
3300032892\|Ga0335081_10115487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3942	Open in IMG/M
3300032893\|Ga0335069_10626649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1231	Open in IMG/M
3300032898\|Ga0335072_10504328	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300033158\|Ga0335077_10126988	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.25%
Aquatic	Environmental → Aquatic	12.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.55%
Peat	Environmental → Terrestrial → Peat	14.71%
Freshwater	Environmental → Aquatic → Freshwater	12.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.18%
Loam	Environmental → Terrestrial → Soil → Loam	17.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108210161	3300001593	Forest Soil	MLVIDELDGTTVERAGALVAREHAAARQVRPELPAGFSSADVCAAALQRLRDSGHHGLVATDN
JGIcombinedJ51221_102026122	3300003505	Forest Soil	MITGTLAEDVWMLVIDDLGEATVERAGALVAREHAVARQVRPELPAGFDTADVCAAALQRLRDSGHGGLVATDNGRTVAVMTATVRQHPAGGQYARLPAE
Ga0062389_1024865802	3300004092	Bog Forest Soil	MITGMFAEGVVMLVIEDLDGATVECAGALVAREHAAARQVRPELPAAFDSAEVCAAALQRLCDSGHHGRLRRTQA*
Ga0062389_1044494481	3300004092	Bog Forest Soil	MLVIENLDGATVERAGALVALEHAAARQVRPELPAAFDSAEVCAAALERLSGGGHHGLVASSSGRTVAVMTATVR
Ga0062389_1045157261	3300004092	Bog Forest Soil	MLVIEALDGATVERAGALVACEQAAGRRVRPELPAAFEDPDVCTAALQRLCDSGQHGLVVMGNGRAAAVMAAAAR
Ga0062595_1015739471	3300004479	Soil	MLVIQALDGATVECAGALVACEQAAARRVRPELPAAFDSPDVCTAALQRLCDSGHHGLVV
Ga0070714_1004304791	3300005435	Agricultural Soil	MITGALAGVVLSLVIDDLDGATVERAGALVAREHAAARQVRPELPPGFEGAGVCAAALQRLC
Ga0070711_1002705392	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VALVIEALDEASFERAAALVAREHAAARQVRPELPAGFGDAAVCEAALRQLCGRGHHGLVVTSGGRAVAV
Ga0070711_1011172841	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VALVIEALGEATFERAAALVAREHAAARQVRPELPAGFGDAAVCEAALRHLCGSGHHGLVVTSGGRAVAVMTVTVRETPTVSRYARLPAEGFA
Ga0070711_1013236212	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VALDIEALGEATFERAAALVAREHAAARQVRPELPAGFGDAAVCEAALRQLCGRGHHGLVVTSGGRAVAVMTVTVRETPTVSRYARLP
Ga0070706_1002289143	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIEALDGVTVECAGALVACEQAAARRVRPELPAAFDSPDFCMAALQRLCDSG
Ga0070707_1015398791	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIEDLDQATFERAGMLVAREHAAARRVRPGLPADFGSAGLCAAALERLCGSGHRGLVATENGRTVAVMTATVRPHPAGGRYARL
Ga0070761_111142671	3300005591	Soil	MLVIETLDGATVERAGALVACEQAAARRVRPELPAAFGSPDVCTAALQRLCDSGQHGLVV
Ga0080026_100199463	3300005952	Permafrost Soil	MLVIDDLDDTTIECAGALMAREHAAARQVRPELPAGFEDGQACAAALQRLRDSGHRGLVAMTTAARSRSSPRRCARTLAP
Ga0070717_101914061	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIEALDGVTVECAGALVACEQAAARRVRPELPAAFEDPEVCTAALQRLCDSGQHGLVVMGNGRAAAVMAAAARENPAVGRYALLLAD
Ga0070717_105220314	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQVGLPSATLMITEALAEDVLILVIDDLDEATLERAGALVAREHAAVRQVRPELPAGFDSADVCVA
Ga0070717_114229701	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VALVIEALGEATFERAAALVASEHAAARQVRPELPAGFGDAAVCEAALRHLCGSGHHGLVVTSGGRAVAVMTVTVRETPTVSRYAR
Ga0079219_106379561	3300006954	Agricultural Soil	MLVIQALDGATVECAGALVACEQAAARQVRPELPTAFDSPDVCTAALQRLCDSGQHGLVVMGNGRAAAVMAAAARENPAVGRYA
Ga0116216_104764331	3300009698	Peatlands Soil	MVMLVIEALDGATVERAGALVACEQAAARQVRPELPAAFDSPDVCMAALQRLCDSGQHGLVVMGNGR
Ga0134128_114970301	3300010373	Terrestrial Soil	VVLVTEELGEATFERAAALVAREHAAARQVRPELPDGFGDAGVCEATLRHLCGSGHHGLVATSDGRAVAVLTVT
Ga0136449_1002016993	3300010379	Peatlands Soil	MITGASAEGMVMLVIEALGGATVECAGALVACEQAAARRVRPELPAAFDSPDVCMAALQRLCDSGQHGLVVMGNGR
Ga0136449_1008718181	3300010379	Peatlands Soil	LSLVIDDLGGAAVERAGALVARAHAVARQVRPELPADFEDAEVCAAALQRLCDSGHRGLVATDKGRTVAVMTATVRQHPAGGRYAR
Ga0136449_1023020871	3300010379	Peatlands Soil	MLVIEDLDEATVERAGALVAREHAAARQVRPELPAGFGGAGFCTAALQRLRDSGHHGLVATGDGRTVAVMTATVRQHPAGGRYAR
Ga0137365_100292381	3300012201	Vadose Zone Soil	MLVIEDLDQATLERAGMLVAREHAAARRVRPGLPADFGSAGLCEAALERLCGSGHRGLVATEN
Ga0137359_116279141	3300012923	Vadose Zone Soil	MITGALAEDIWMLVIDDLGEATVERAGALVAREHAAARQVRPELPAGFATADVCAAALQRLRDSGHGGL
Ga0181516_102217792	3300014655	Bog	VVAVAQSDDDRRALVEGVLMLVIDDLDGATFEGAGALVAREQATARRVRPEWPADFGSADACAAALERLCDSGHHGLVATENGRTVAV
Ga0182038_116351201	3300016445	Soil	MLVIDDLGRATVERAGALVAREHAAARQVRPELPAASGSAEVCAAALQRLCDSGHRGLVATKNWRTVAVMTATVRQHPAGGRYA
Ga0182038_122002321	3300016445	Soil	MLVIEALDGATVERAGMLVAREHAAARHVRPELPAAFDSAEACTAVLQRLCDSGHHGLVATGNGRAVAVLTAEVRE
Ga0187812_10682481	3300017821	Freshwater Sediment	MLISQNLDGATVERAGALMAREQAAARQVRPELPAAFDSAEVCAAALERLSGSGHHGLVGTEDGRAVAVMTAAVRENPHVGRYARLPAEGF
Ga0187818_100859481	3300017823	Freshwater Sediment	MLVIENLDQATVERAGTLVAREQAAARQVRPELPADFGSAEVCAAALKRLCGSGHRGLVATEGRRTVAVMTAVVRQHPAGGRYVRLPAEGFAVD
Ga0187820_10528961	3300017924	Freshwater Sediment	MLGIENLDGATLERAGTLVAREHAAARQVRPELPAAFESAQFCAAALERLSGSGHHGLVATDNGRA
Ga0187807_10288282	3300017926	Freshwater Sediment	MLVIENLDEATVECAGALIAREHAAARQVRPELPADFGTADVCAAALQRLRDSGHHGLVATEGGHTVAVMTATVRQHPAGGRY
Ga0187806_12009911	3300017928	Freshwater Sediment	MLVIEDLGEATVERAGALVAREHAAARQVRPELPAGFDTVGVCAAALQRLRDSGHRGLVATDNGRTVAVMTATVRQHPAGGQ
Ga0187814_100517643	3300017932	Freshwater Sediment	MITGALAEDVWMLVIEDLGEATVERAGALVAREHAAARQVRPELPAGFDTVGVCAAALQRLRDSGHRGLVATDNGRTVAVMTATVRQHPAGGQ
Ga0187819_101304052	3300017943	Freshwater Sediment	MITGALAEDVWMLVIEDLGEATVERAGALVAREHAAARQVRPELPAGFDTVGVCAAALQRLRDSGHRGLVATDNGRTVAVMTATVRQHPAGGQYARLPAEGFAV
Ga0187778_107170502	3300017961	Tropical Peatland	MLVIDDLDEATFERAGALVAREHAAARRVRPELPAGFGSAGVCAAALRRLCHSGHRGLVATDNGRTAAVMTATVRENPVVGRYA
Ga0187780_108151451	3300017973	Tropical Peatland	MLALDDLDETTVERAGALVACEHAAARQVRPELPAGFASADACAAALQRLCDSGHRGLVATDNGRTVAVMTATVRQNPVAGRYARLPAEGFAVDP
Ga0187777_114735812	3300017974	Tropical Peatland	MLVIDDLDEATFERAGALVAREHAAARRVRPELPAGFGSAGVCAAALQRLCDSGHRGLVAADNGRTVAVMTAT
Ga0187782_114233661	3300017975	Tropical Peatland	MLVIDDLAEATFERAGALVAREHAAARRVRPELPAGFGSAGVCAAALQRLCDSGHRGLVAADNGRTVAVMTATVRENPVVGRYARLPAEGFAVDP
Ga0187766_103927841	3300018058	Tropical Peatland	MLVINDLDGATVERAGALVAREHAAARQVRPELPASFEDAGVCAAALQRLRDSGHRGLVAAGNGRTVA
Ga0187772_114549531	3300018085	Tropical Peatland	MMTGVSEDGWMLVIDDLGGATVERAGALVAREHAAARQVRPELPAGSGSAGVCAAALQRLCGSGHHGLVATDNGRTVAVMTAAVRQHPAG
Ga0137408_13034771	3300019789	Vadose Zone Soil	MLVIEELGEATVERAAALVAREHAAARQVRPELPDGFGEAGACAVALRRLCASGHHGLVVSEGGRAVAVMTVTVREIPAV
Ga0193728_13103081	3300019890	Soil	MLAIEDLDHATFERAGTLVAREHAAARRVRPGLPADFGRAGPCAAALQRLCGSGHRGLVATENGRTVAVMTATVRPHPAG
Ga0210399_114706031	3300020581	Soil	MITGTLAEDVWMLVIDDLGEATIERAGALVAREHAAARQVRPELPAGFDTADVCAAALQRLRGSGHGGLVATDNGRTVAVMTATVRQHPAGGQYARLPAE
Ga0210395_100058048	3300020582	Soil	MLVIADLDEATVERAGALVAREHAAARQVRPELPADFGGAGFCTAALQRLRDSGHHGLVATG
Ga0210395_105073991	3300020582	Soil	MLVIEDLGEATVELAGALVAREHAAARQVRPELPDGFGGAGFCTAALQRLRDSGHHGLVATGDGRTVAVM
Ga0210401_106535352	3300020583	Soil	MLVIEDLGEATVELAGALVAREHAAARQVRPELPDGFGGAGFCTAALQRLRDSGHHGLVATGDGRTVAVMTATVRQH
Ga0210401_108489041	3300020583	Soil	MLVIEDLDEATVERAGALVAREHAAARQVRPELPAGFGGAGFCTAALQRLRDSGHHGLVATGDGRTVAVMTATVRQH
Ga0210396_116975831	3300021180	Soil	MLVIEALDGATVECAGALVACEQAAARRVRPELPAAFDSPDFCMAALQRLCDSGHLGLVVMG
Ga0210385_103535451	3300021402	Soil	MLVIEALDGATVECAGALVACEQAAARQVRPELPAAFEDPDVCTAALQRLCDSGQHGLVVMGNGRAAAVMAAAVR
Ga0210389_113689471	3300021404	Soil	MLGIETLDGATVERAGALVACEQAAARRVRPELPAAFENPDVCTAALQRLCDSGQRGLVVMGNRR
Ga0210386_110311312	3300021406	Soil	MVMLVIEALDGATVERAGALVACEQAAARQVRPELPAAFEDPDVCAAALQRLCDSGQHGLVVMDNGRAAGVMAA
Ga0210386_115115882	3300021406	Soil	MLVIEDLDEATVERAGALVAREHAAARQVRPELPAGFGGAGFCTAALQRLRDSGHRGLVATGDGRTVAVMTATVRQHPAGGRYARLPAEGFAVDPDL
Ga0210384_100993001	3300021432	Soil	MLAIEALDGATVECAGALVACEQAAARQVRPELPAAFDSPDVCTAALQRLCDSGQHGLVVMGEG
Ga0210390_115925812	3300021474	Soil	MITGTLAEDVWMLVIDDLGEATVERAGALVAREHAAARQVRPELPAGFDTADVCAAALQRLRGSGH
Ga0210410_101792483	3300021479	Soil	MLVIEDLDEATVERAGALVAREHAAARQVRPELPAGFGGAGFCTAALQRLRDSGHPGLVA
Ga0210410_110162991	3300021479	Soil	MLVIEDLGEATVELAGALVAREHAAARQVRPELPDGFGGAGFCTAALQRLRDSGHHGLVA
Ga0224549_10343771	3300022840	Soil	MLVIENLDGATVERAGALVAREHAAARQVRPELPAAFDSAEVCAAALERLSGGGHHGLVASSSGRTVAVMTATVRENPAVGRQ
Ga0208714_10462162	3300025527	Arctic Peat Soil	LSLVIDDLDGATVERAGALVAREHAAARQVRPELPAGFEDAGVCAAALQHLRDSGHRGLVVTGN
Ga0207663_112477452	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VALVIEALDEASFERAAALVAREHAAARQVRPELPAGFGDAAVCEAALRHLCGRGHHGLVVTSGGRA
Ga0207664_104157431	3300025929	Agricultural Soil	MLGIEALDGATVERAGALVACEQAAARRVRPELPAAFEDPEVCTAALQRLCDNGQHGLV
Ga0209871_10555692	3300026217	Permafrost Soil	MLVIDDLDDTTIECAGALMAREHAAARQVRPELPAGFEDGQACAAALQRLRDSGHRGLVATDDGRAVAVIT
Ga0208099_10379502	3300027096	Forest Soil	MLGIETLDGATVERAGALVACEQAAARRVRPELPAAFGSPDVCTAALQRLCDSGQHGLVVMGNGRAAAVM
Ga0208239_10022973	3300027168	Forest Soil	MLVTDDLGEATVDRAGALVAREHAAARQVRPELPAGFGSAAVCAAALQRLCDSGHHGLVATDNGRTVAVMT
Ga0208241_10455072	3300027297	Forest Soil	MLVIEILDGATVERAGALVACEQAAARRVRPELPAAFGSPDVCTAALQRLCDSGQHGLVVMGNGRAAAVMAA
Ga0207826_12158241	3300027680	Tropical Forest Soil	MLVIDDLDEATVEQAGALVAREHAAARQVRPELPTGFGRADVCAAALQRLCDSGNRGLVATDNGRMVAVMTATMRRH
Ga0209655_100511322	3300027767	Bog Forest Soil	MLGIEALDGATVECAGALVAREQAAARRVRPELPAAFGSPDLCTALLQDLCDSGHHGLVVMGNGR
Ga0209772_100308272	3300027768	Bog Forest Soil	MLGIEALDGATVECAGALVAREQAAARRVRPELPAAFGSPDLCTALLQDLCDSGHHGLVVMGNGRAAAVMAAAAREN
Ga0302220_101065991	3300028742	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANGRTVAVMTATVRQHPAGGR
Ga0302220_103636971	3300028742	Palsa	MLVVDDLGEATVERAAALVAREHAAARQVRPELPARFGTVGVCAAALQRLRDSGHGGLVATDNGRTVAVMTAAVR
Ga0302234_103699271	3300028773	Palsa	MLVIDDLDGATVECAGALVAREHAAARQVRPELPAGFDSAEVCAAALQRLCDSGHHGLVATGNGRIESALYG
Ga0302234_104249721	3300028773	Palsa	MLVVDDLGEATVERAAALVAREHAAARQVRPELPARFGTVGVCAAALQRLRDSGHGGLVATDNGRTVAVMTAAVRQHPAGGKYARLPAEGFAVD
Ga0302225_101141051	3300028780	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANGRTVAVMTATVRQHP
Ga0302225_106203831	3300028780	Palsa	MLVIENLDGATVERAGALVAREHAAARQVRPELPAAFDSAEVCAAALERLSGGGHHGLVASSSGR
Ga0302228_105106381	3300028808	Palsa	MLVVDDLGEATVERAAALVAREHAAARQVRPELPARFGTVGVCAAALQRLRDSGHGGLVATDNGRTVAVMTAAVRQHPA
Ga0302218_102189572	3300028863	Palsa	MLVIDDLGGATVDCAGALVAREHAAARQVRPELPAGFDSAEVCAAALQRLCDSGHHGLVATGNGRIESALYG
Ga0311368_106399531	3300029882	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANG
Ga0302179_100722031	3300030058	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANGRTVAVMTATVRQHPAGG
Ga0311353_100322848	3300030399	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANGRTVAVMT
Ga0302316_104050522	3300030646	Palsa	MLVIDDLNGATVECAGALVRWCAGALVAREHAAARQVRPELPAGFDSAEVCAAALQRLCDSGHHGLVATGNGRIESALCT
Ga0302308_101114761	3300031027	Palsa	MLVTDDLDDATIERAGALVAREHAAARQVRPELPAGFDSADVCAAALQQLRDSGHRGLVVTANGRTVAVMTATVRQHPAGGRYARLPAEGFAVEP
Ga0302326_136258161	3300031525	Palsa	MLVIDELDDATIECASALMAREHAVARQVRPELPAGFEGAQACAAALQGLRDSGHRGLVATDDGRAVAVMTAAVRESAGTG
Ga0318516_108172581	3300031543	Soil	MLLIEALDGATVERAGMLVAREHAAARHVRPELPAAFDSAEACTAVLQRLCDSGHHGLVATGNGR
Ga0318534_107467941	3300031544	Soil	MLVIEALDGATVERAGALVACEQAAARRVRPELPAAFDSPEVCTAALQRLCDSGQQQS
Ga0318571_102607871	3300031549	Soil	MLVIEDLDESTVERAGALVAREHAAARKARPALPAGFESADACTAALQRLYDSGHRGLVATDNGRAALVIAARVQEN
Ga0318528_105429341	3300031561	Soil	MLLIEALDGATVERAGMLVAREHAAARHVRPELPAAFDSAEACTAVLQRLCDSGHHGLVATGNGRAVAVLTAEVREN
Ga0306918_113102642	3300031744	Soil	MLVIDDLDEATVERAGALIAREHAVARQVRPELPAGFGSASVCAAALQRLCDSGHRGLVATDDGRTVAVMTATARENPVVGRYARLPAEGFAV
Ga0318564_101467191	3300031831	Soil	MLISQNLDGATVERAGALMAREQAAARQVRPELSAAFDSAEVCAAALERLSGSGHHGLVATEDG
Ga0306919_109964191	3300031879	Soil	MLVIDDLGRATVERAGALVAREHAAARQVRPELPAASGSAEVGAAALQRLCDSGHRGLVATKNWRTVA
Ga0306922_112018721	3300032001	Soil	MLVIDDLDEATVERAGALVAREQAAARRVRPELPTGFGDAGVCAAALQRLRDSGHRGLVATDNGGIVAVMTATVRENPVVGRYARLPAEGFAV
Ga0318562_105301732	3300032008	Soil	MLVIEALDGATVECAGALVACEQAAARRVRPELSAAFASPDVCTAALQRLCDSGHHGLVV
Ga0318569_102991321	3300032010	Soil	MLVIEDLDGATVERAGALVAREHAAARRVRPELPTRFEDADVCAAALQRLRDSGHRGLVATDNGRTAAVMTV
Ga0318549_105095261	3300032041	Soil	MLVIDDLDEATVERAGALVAREQAAARRVRPELPTGFGDAGVCAAALQRLRDSGHRGLVATDNGATVAVMTATVR
Ga0318558_101952212	3300032044	Soil	MLVIEALDGATVECAGALVACEQAAARRVRPELSAAFASPDVCTAALQRLCD
Ga0311301_1001951718	3300032160	Peatlands Soil	MLVIEALGGATVECAGALVACEQAAARRVRPELPAAFDSPDVCMAALQRLCDSGQHGLAVMGN
Ga0311301_104516391	3300032160	Peatlands Soil	EDLGEATVERAGALVAREHAAARQVRPELPAGFGGAGFCTAALQRLRDSGHHGLVATGDGRTVAVMTATVRQHPAGGRYAPAAG
Ga0335079_104837242	3300032783	Soil	MLGTETLDGATVERAGALVACEQAAARRVRPELSAAFEDPDVCTAALQRLCDSGYHGLVATDHGRVVAVMAAAARENPA
Ga0335078_116335081	3300032805	Soil	MLGIQVLDGATVECAGALVAREQAAARRVRPELPAAFDSPGVCAAALQRLCDSGHPFGSFQLRR
Ga0335081_101154873	3300032892	Soil	MLGIQVLDGATVECAGALVAREQAAARRVRPELPAAFDSPGVCAAALQRLCDSGHPFGSFQLRRSASATMMPSGRQA
Ga0335069_106266491	3300032893	Soil	VVLVIEELGEATFERAAVLVAREHAAARQVRPELPDGFGDAGICEATLRHLCGSGHHGLVVTSNG
Ga0335072_105043282	3300032898	Soil	MLVIDDLDDATVERAGALVAGEHAAARRVRPELPAAFEDAGACAGALQRLRDSGHRGLVATGGGRTLAVMT
Ga0335077_101269881	3300033158	Soil	MLVIDDLGEATLERAGALVAREHAAARRVRPELPAGFGTAGVCAAALQRLCDSGHRGLVATDDGRMVAVMTAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100485

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences