Metagenome / Metatranscriptome Family F100469

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100469
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	68 residues
Representative Sequence	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDEVYR
Number of Associated Samples	67
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.43 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	44.12 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.980 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (74.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 32.29% Coil/Unstructured: 55.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF06067	DUF932	12.75
PF01555	N6_N4_Mtase	11.76
PF07883	Cupin_2	4.90
PF00565	SNase	3.92
PF13578	Methyltransf_24	1.96
PF03150	CCP_MauG	1.96
PF14279	HNH_5	1.96
PF06035	Peptidase_C93	1.96
PF04545	Sigma70_r4	1.96
PF01230	HIT	0.98
PF05433	Rick_17kDa_Anti	0.98
PF08722	Tn7_TnsA-like_N	0.98
PF13328	HD_4	0.98
PF01370	Epimerase	0.98
PF05996	Fe_bilin_red	0.98
PF16861	Carbam_trans_C	0.98
PF11450	DUF3008	0.98
PF00154	RecA	0.98
PF01755	Glyco_transf_25	0.98
PF13671	AAA_33	0.98
PF16805	Trans_coact	0.98
PF13186	SPASM	0.98
PF13476	AAA_23	0.98
PF02562	PhoH	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	11.76
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	11.76
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	11.76
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.98
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.98
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.98
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
All Organisms	root	All Organisms	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Viruses	superkingdom	All Organisms → Viruses	25.49 %
cellular organisms	root	All Organisms → cellular organisms	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.51 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	16.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Vibrio phage Va1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage Va1	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876005\|none_p105143	Not Available	538	Open in IMG/M
3300000101\|DelMOSum2010_c10001853	All Organisms → cellular organisms → Bacteria	16666	Open in IMG/M
3300000115\|DelMOSum2011_c10008673	Not Available	5559	Open in IMG/M
3300000928\|OpTDRAFT_10349031	Not Available	773	Open in IMG/M
3300001352\|JGI20157J14317_10076389	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1336	Open in IMG/M
3300001353\|JGI20159J14440_10001019	Not Available	20542	Open in IMG/M
3300001353\|JGI20159J14440_10031199	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2278	Open in IMG/M
3300003264\|JGI26119J46589_1048323	Not Available	508	Open in IMG/M
3300005941\|Ga0070743_10004902	Not Available	4838	Open in IMG/M
3300005942\|Ga0070742_10069474	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	962	Open in IMG/M
3300007229\|Ga0075468_10033421	All Organisms → Viruses → Predicted Viral	1822	Open in IMG/M
3300007229\|Ga0075468_10094865	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	952	Open in IMG/M
3300007276\|Ga0070747_1004779	Not Available	6218	Open in IMG/M
3300007276\|Ga0070747_1018493	All Organisms → Viruses → Predicted Viral	2859	Open in IMG/M
3300007540\|Ga0099847_1000381	Not Available	15165	Open in IMG/M
3300007554\|Ga0102820_1001650	Not Available	6728	Open in IMG/M
3300007557\|Ga0102821_1010165	All Organisms → Viruses → Predicted Viral	2644	Open in IMG/M
3300007681\|Ga0102824_1075276	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	887	Open in IMG/M
3300007692\|Ga0102823_1020022	All Organisms → Viruses → Predicted Viral	1857	Open in IMG/M
3300009000\|Ga0102960_1082037	All Organisms → Viruses → Predicted Viral	1178	Open in IMG/M
3300009071\|Ga0115566_10000959	Not Available	24945	Open in IMG/M
3300009071\|Ga0115566_10001469	All Organisms → cellular organisms → Bacteria	20084	Open in IMG/M
3300009071\|Ga0115566_10011815	All Organisms → cellular organisms → Bacteria	6608	Open in IMG/M
3300009071\|Ga0115566_10065579	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300009071\|Ga0115566_10105160	All Organisms → Viruses → Predicted Viral	1810	Open in IMG/M
3300009071\|Ga0115566_10176969	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300009071\|Ga0115566_10206715	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300009071\|Ga0115566_10592440	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	621	Open in IMG/M
3300009074\|Ga0115549_1003680	Not Available	8080	Open in IMG/M
3300009076\|Ga0115550_1070370	All Organisms → Viruses → Predicted Viral	1362	Open in IMG/M
3300009193\|Ga0115551_1410760	Not Available	581	Open in IMG/M
3300009423\|Ga0115548_1060045	Not Available	1323	Open in IMG/M
3300009438\|Ga0115559_1039048	Not Available	2127	Open in IMG/M
3300009449\|Ga0115558_1181000	Not Available	877	Open in IMG/M
3300009449\|Ga0115558_1376303	Not Available	557	Open in IMG/M
3300009472\|Ga0115554_1175120	Not Available	878	Open in IMG/M
3300009495\|Ga0115571_1091728	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300009495\|Ga0115571_1113170	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1165	Open in IMG/M
3300009495\|Ga0115571_1370095	Not Available	563	Open in IMG/M
3300009498\|Ga0115568_10015614	Not Available	4475	Open in IMG/M
3300009505\|Ga0115564_10541718	Not Available	556	Open in IMG/M
3300009507\|Ga0115572_10216578	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300013010\|Ga0129327_10016123	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3998	Open in IMG/M
3300017697\|Ga0180120_10011650	Not Available	4192	Open in IMG/M
3300017764\|Ga0181385_1067412	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300018682\|Ga0188851_1004535	All Organisms → Viruses → Predicted Viral	2039	Open in IMG/M
3300020165\|Ga0206125_10003421	All Organisms → cellular organisms → Bacteria	15242	Open in IMG/M
3300020165\|Ga0206125_10012561	Not Available	5757	Open in IMG/M
3300020165\|Ga0206125_10030335	All Organisms → Viruses → Predicted Viral	2961	Open in IMG/M
3300020166\|Ga0206128_1000230	Not Available	67575	Open in IMG/M
3300020166\|Ga0206128_1002520	Not Available	16395	Open in IMG/M
3300020166\|Ga0206128_1009015	Not Available	6660	Open in IMG/M
3300020166\|Ga0206128_1031294	All Organisms → Viruses → Predicted Viral	2823	Open in IMG/M
3300020166\|Ga0206128_1233806	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	685	Open in IMG/M
3300020175\|Ga0206124_10004399	Not Available	9580	Open in IMG/M
3300020182\|Ga0206129_10025326	Not Available	4415	Open in IMG/M
3300020182\|Ga0206129_10027058	Not Available	4204	Open in IMG/M
3300020185\|Ga0206131_10022194	Not Available	5156	Open in IMG/M
3300020185\|Ga0206131_10162469	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1151	Open in IMG/M
3300021365\|Ga0206123_10002486	Not Available	16071	Open in IMG/M
3300021957\|Ga0222717_10000347	Not Available	40040	Open in IMG/M
3300021957\|Ga0222717_10006470	Not Available	8386	Open in IMG/M
3300021957\|Ga0222717_10013440	Not Available	5624	Open in IMG/M
3300021959\|Ga0222716_10002379	Not Available	15268	Open in IMG/M
3300021959\|Ga0222716_10025246	All Organisms → Viruses → Predicted Viral	4380	Open in IMG/M
3300021959\|Ga0222716_10140575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage Va1	1587	Open in IMG/M
3300022178\|Ga0196887_1049182	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300022178\|Ga0196887_1063709	Not Available	904	Open in IMG/M
3300022217\|Ga0224514_10188402	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	734	Open in IMG/M
3300022223\|Ga0224501_10612276	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	508	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10002224	Not Available	16577	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10003217	Not Available	14853	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10006800	Not Available	9707	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10087327	All Organisms → Viruses → Predicted Viral	1300	Open in IMG/M
3300024346\|Ga0244775_10090580	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2606	Open in IMG/M
3300025543\|Ga0208303_1000554	Not Available	15446	Open in IMG/M
3300025594\|Ga0209094_1008173	Not Available	4089	Open in IMG/M
3300025641\|Ga0209833_1083353	Not Available	965	Open in IMG/M
3300025666\|Ga0209601_1004547	Not Available	7364	Open in IMG/M
3300025680\|Ga0209306_1035914	All Organisms → Viruses → Predicted Viral	1661	Open in IMG/M
3300025699\|Ga0209715_1202840	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	619	Open in IMG/M
3300025704\|Ga0209602_1208191	Not Available	575	Open in IMG/M
3300025806\|Ga0208545_1078952	Not Available	902	Open in IMG/M
3300025869\|Ga0209308_10000051	Not Available	115072	Open in IMG/M
3300025869\|Ga0209308_10044452	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300025886\|Ga0209632_10476575	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	575	Open in IMG/M
3300025890\|Ga0209631_10016320	Not Available	6210	Open in IMG/M
3300025892\|Ga0209630_10225446	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	895	Open in IMG/M
3300025894\|Ga0209335_10017059	Not Available	5386	Open in IMG/M
3300025894\|Ga0209335_10057241	All Organisms → Viruses → Predicted Viral	2278	Open in IMG/M
3300025894\|Ga0209335_10171114	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300026183\|Ga0209932_1069312	Not Available	819	Open in IMG/M
3300027198\|Ga0208163_1037849	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	793	Open in IMG/M
3300027413\|Ga0208950_1008480	All Organisms → Viruses → Predicted Viral	3533	Open in IMG/M
3300027571\|Ga0208897_1009071	All Organisms → Viruses → Predicted Viral	3085	Open in IMG/M
3300027751\|Ga0208304_10016226	All Organisms → Viruses → Predicted Viral	3059	Open in IMG/M
3300031519\|Ga0307488_10002081	All Organisms → cellular organisms → Bacteria	16918	Open in IMG/M
3300031519\|Ga0307488_10013957	Not Available	6495	Open in IMG/M
3300031519\|Ga0307488_10014688	Not Available	6338	Open in IMG/M
3300031519\|Ga0307488_10053347	Not Available	3120	Open in IMG/M
3300031519\|Ga0307488_10089145	All Organisms → Viruses → Predicted Viral	2275	Open in IMG/M
3300031519\|Ga0307488_10415303	Not Available	828	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.06%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	43.14%
Coastal	Environmental → Aquatic → Marine → Coastal	16.67%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	11.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.82%
Inlet	Environmental → Aquatic → Marine → Inlet	3.92%
Sediment	Environmental → Aquatic → Marine → Sediment	1.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%
Strait	Environmental → Aquatic → Marine → Strait	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	43.14%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.80%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.86%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	29.41%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	13.73%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.82%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	8.82%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	5.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.88%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.92%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.96%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.96%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.96%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.98%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.98%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.98%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876005	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-3LG-ETM-15m	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300003264	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025594	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025666	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027198	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753 (SPAdes)	Environmental	Open in IMG/M
3300027413	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental	Open in IMG/M
3300027751	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
none_1051433	2236876005	Marine Estuarine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTGYTVFVKSEEVYR
DelMOSum2010_1000185318	3300000101	Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHDDRGFPNHNTDYTVFVKSEEVYR*
DelMOSum2011_1000867313	3300000115	Marine	MSGLTTNPKAYLNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTSEVSA*
OpTDRAFT_103490312	3300000928	Freshwater And Marine	MSELTINPKAYLNGSYVNFERGGKRATGFVSEVFDEGFAVDMVVHNDKRFPHHNTDYTVFVKSEEVYL*
JGI20157J14317_100763893	3300001352	Pelagic Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR*
JGI20159J14440_1000101925	3300001353	Pelagic Marine	MLKLNTKEFIVSELTRNPKAYLNGSYVNFERMGKRCTGFVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTENAFR*
JGI20159J14440_100311992	3300001353	Pelagic Marine	MSGSTHNPKAYLNGSFVNFERNGKRATGFVSEVFEDGFAVDMIVHDDKGFPKHNTDYTVFVKTEAISR*
JGI26119J46589_10483231	3300003264	Marine	MSELTINPKAYLNGSYVNFERGGKRATGFVSEVFDEGFAVDMVVHNDTRFPHHNTDYTVFVKTEEAKS*
Ga0070743_1000490210	3300005941	Estuarine	MNESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR*
Ga0070742_100694743	3300005942	Estuarine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKSEEVYR*
Ga0075468_100334216	3300007229	Aqueous	MSELTTNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVY
Ga0075468_100948651	3300007229	Aqueous	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSGFPGHNTDYTVFVKTDEAFR*
Ga0070747_100477915	3300007276	Aqueous	MSELTSNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR*
Ga0070747_10184931	3300007276	Aqueous	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFGVDMVVHNDKGFPNHNTDYTVFVKTDEVYR*
Ga0099847_100038125	3300007540	Aqueous	MSGLTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTSEVSA*
Ga0102820_100165018	3300007554	Estuarine	MNESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKSEEVYR*
Ga0102821_101016510	3300007557	Estuarine	MNESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKSE
Ga0102824_10752762	3300007681	Estuarine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR*
Ga0102823_10200221	3300007692	Estuarine	TTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKSEEVYR*
Ga0102960_10820372	3300009000	Pond Water	MSELTTNPKAHLNGSYVKFERMGKRCTGFVEEVFDDGFAVATVAHNDAGFPHHNTDYVVFVKTEEAYQ*
Ga0115566_1000095930	3300009071	Pelagic Marine	MSELTTNPKAYLNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDEAFR*
Ga0115566_1000146913	3300009071	Pelagic Marine	MSGSTHNPKAYLNGSFVNFERNGKRATGFVSEVFEDGFAVDMIVHDDKGFPKHNTDYTVFVKTKAISR*
Ga0115566_1001181512	3300009071	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSGFPGHNTEYTVFVKTDEAFR*
Ga0115566_100655793	3300009071	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTDEAFR*
Ga0115566_101051606	3300009071	Pelagic Marine	SMSELTSNPKAYLNGSYINFERNGKRTSGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR*
Ga0115566_101769695	3300009071	Pelagic Marine	VSELTRNPKAYLNGSYVNFERMGKRCTGFVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTENAFR*
Ga0115566_102067151	3300009071	Pelagic Marine	MSDNPKAYLNGSYVNFERMGKRKTGFVEEVFDDGFAVATVVHDDKGFPLHNTDYVVFVKTEDAFR*
Ga0115566_105924403	3300009071	Pelagic Marine	SMSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR*
Ga0115549_100368017	3300009074	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR*
Ga0115550_10703706	3300009076	Pelagic Marine	MSGLTTNPKAYMNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKT
Ga0115551_14107601	3300009193	Pelagic Marine	KAYLNGSYVNFERNGKRTTGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDEVYR
Ga0115548_10600454	3300009423	Pelagic Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHNEKGFPNHNTDY
Ga0115559_10390482	3300009438	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDEVYR*
Ga0115558_11810001	3300009449	Pelagic Marine	KAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSVFPGHNTEYTVFVKTDEAFR
Ga0115558_13763033	3300009449	Pelagic Marine	KNKRILSMSELTSNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR*
Ga0115554_11751201	3300009472	Pelagic Marine	MNELTTNPKSYLNGSYVNFERMGKRKTGFVEEVFDDGFAVATVVHDDKGFPLHNTDYVVFVKT
Ga0115571_10917285	3300009495	Pelagic Marine	ELTTNPKAYLNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR*
Ga0115571_11131702	3300009495	Pelagic Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDDGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR*
Ga0115571_13700952	3300009495	Pelagic Marine	MNELTTNPKSYLNGSYVNFERMGKRKTGFVEEVFDDGFAVATVVHDDQGFPLHNTDYVVFVKTEDAFR*
Ga0115568_100156146	3300009498	Pelagic Marine	MSGSTHNPKAYLNGSFVNFERNGKRATGFVSEVFEDGFAVDMIVHDDKGFPKHNTDYTIFVKTEAISR*
Ga0115564_105417182	3300009505	Pelagic Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHNDRGFPNHNTDYTVFVKSEEVYR*
Ga0115572_102165785	3300009507	Pelagic Marine	MSGLTTNPKAYMNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR*
Ga0129327_100161235	3300013010	Freshwater To Marine Saline Gradient	MSELTTNPKAYLNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTSEVSA*
Ga0180120_100116501	3300017697	Freshwater To Marine Saline Gradient	GSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR
Ga0181385_10674121	3300017764	Seawater	MSESNTNPKAYLSGSYVNFERMGKRCTGFVEEVFDDGFAVATVVHDDKAFPHHNTDYVVFVKTEDVSR
Ga0188851_10045358	3300018682	Freshwater Lake	MSESTTNPKAYLNGSYVNFERNGKRATGFVSEVFDDGFAVDMVAHDDKGFPNHNTDYTVFVKSEEVYR
Ga0206125_1000342121	3300020165	Seawater	MSESTTNPKAYLNGSYVNFERNGKRATGFVSEVFDDGFAVDTVVHNDRGFPNHNTDYTVFVKSEEVYR
Ga0206125_100125618	3300020165	Seawater	MSELTTNPKAYLNGSYVNFERNGKRRTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR
Ga0206125_100303355	3300020165	Seawater	VSELTRNPKAYLNGSYVNFERMGKRCTGFVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTENAFR
Ga0206128_100023037	3300020166	Seawater	MSELTTNPKAYLNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDEAFR
Ga0206128_100252022	3300020166	Seawater	MSDNPKAYLNGSYVNFERMGKRKTGFVEEVFDDGFAVATVVHDDKGFPLHNTDYVVFVKTEDAFR
Ga0206128_100901512	3300020166	Seawater	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTVFVKTDKVYR
Ga0206128_10312943	3300020166	Seawater	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0206128_12338063	3300020166	Seawater	PRRIFSMSESTTNPKAYLNGSYVNFERNGKRATGFVSEVFDDGFAVDTVVHNDRGFPNHNTDYTVFVKSEEVYR
Ga0206124_1000439910	3300020175	Seawater	VSELTRNPKAYLNGSYVNFERMGKRCTGGVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTENAFR
Ga0206129_100253263	3300020182	Seawater	MIESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0206129_100270586	3300020182	Seawater	MSKSTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKRFPNHNTDYTVFVKTEEASA
Ga0206131_100221943	3300020185	Seawater	MSELTSNPKAYLSGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKRFPRHNTDYTVFVKTEDASS
Ga0206131_101624693	3300020185	Seawater	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDDGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0206123_1000248626	3300021365	Seawater	GIRHHCQNHHRRMETKQFKKRRILSMSELTTNPKAYLNGSYVNFERNGKRRTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR
Ga0222717_1000034710	3300021957	Estuarine Water	MSEVTTNHKAYLNGCYVNFERNGKRAFGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDEVYR
Ga0222717_1000647013	3300021957	Estuarine Water	MSELTTNPKAYLNGTYVNFERNGKRSTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTEDAFR
Ga0222717_1001344015	3300021957	Estuarine Water	MSELTTNPKAYLNGSYVNFERNGKRRTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFIKTDEVYR
Ga0222716_100023795	3300021959	Estuarine Water	MSELTTNHKAYLNGTYVNFERNGKRSTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTEDAFR
Ga0222716_100252463	3300021959	Estuarine Water	MSNNPKAYLNGSYVNFERMGKRCTGFVEEVFDDGFAVAAVVHNDAGFPHHNTDYVVFVKTEDAFR
Ga0222716_101405752	3300021959	Estuarine Water	MSELTRNPKAYLNGSYVNFARMGKRCTGFVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTEDAFR
Ga0196887_10491823	3300022178	Aqueous	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSGFPGHNTDYTVFVKTDEAFR
Ga0196887_10637092	3300022178	Aqueous	MSELTSNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR
Ga0224514_101884023	3300022217	Sediment	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHNDKGFPNHNTDYTVFVKSEEVYR
Ga0224501_106122761	3300022223	Sediment	MSELTRNPKEYLNGSYVNFERMGKRCTGFVEEVFDDGFAVATVAHDDKGFPHHNTDYVVFVKTEGVFV
(restricted) Ga0233426_1000222412	3300022920	Seawater	MSKLTANPKAYLNGTYINFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTEAASS
(restricted) Ga0233432_1000321713	3300023109	Seawater	MSELTINPKAYFNGSYVNFERDGKRTTGFVSEVFDEGFAVDMVVGNDTRFPHHNTDYTVFVKTENASH
(restricted) Ga0233432_1000680019	3300023109	Seawater	MSELTTNPKAYLNGSYVNFERGGKRATGFVSEVFDEGFAVDMVVHNDKRFPHHNTDYTVFVKTEEAKS
(restricted) Ga0233412_100873274	3300023210	Seawater	MSNEVTTVNHKAYLDGCYVNFERNGKRATGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDEVYR
Ga0244775_100905803	3300024346	Estuarine	MNESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKSEEVYR
Ga0208303_100055432	3300025543	Aqueous	MSGLTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTSEVSA
Ga0209094_10081733	3300025594	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR
Ga0209833_10833533	3300025641	Pelagic Marine	MSELTSNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVFVKTDEVYR
Ga0209601_10045471	3300025666	Pelagic Marine	TSNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR
Ga0209306_10359146	3300025680	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSGFPGHNTEYTVFVKTDEAFR
Ga0209715_12028403	3300025699	Pelagic Marine	IKNKRIFSMSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0209602_12081911	3300025704	Pelagic Marine	SNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDKVYR
Ga0208545_10789524	3300025806	Aqueous	MSELTTNPKAYLNGSYVNFERNGKRTTGFVSEVFDEGFGVDMVVHDDKGFPGHNTDYTVFVKTDEAFR
Ga0209308_1000005173	3300025869	Pelagic Marine	MLKLNTKEFIVSELTRNPKAYLNGSYVNFERMGKRCTGFVEEVFDDGFAVATVVHNDAGFPHHNTDYVVFVKTENAFR
Ga0209308_100444525	3300025869	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDKGFPNHNTDYTVFVKTDEAFR
Ga0209632_104765751	3300025886	Pelagic Marine	MSELTSNPKAYLNGSFVNFERNGKRATGFVSEVFEDGFAVDMIVHDDKGFPKHNTDYTVFVKTKAISR
Ga0209631_1001632012	3300025890	Pelagic Marine	SMSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0209630_102254461	3300025892	Pelagic Marine	STTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0209335_1001705912	3300025894	Pelagic Marine	LTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHNDSGFPGHNTEYTVFVKTDEAFR
Ga0209335_100572411	3300025894	Pelagic Marine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVY
Ga0209335_101711141	3300025894	Pelagic Marine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTEYTVF
Ga0209932_10693122	3300026183	Pond Water	MSELTTNPKAHLNGSYVKFERMGKRCTGFVEEVFDDGFAVATVAHNDAGFPHHNTDYVVFVKTEEAYQ
Ga0208163_10378491	3300027198	Estuarine	WRRLSMSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0208950_10084803	3300027413	Marine	MSELTINPKAYLNGSYVNFERGGKRATGFVSEVFDEGFAVDMVVHNDTRFPHHNTDYTVFVKTEEAKS
Ga0208897_10090716	3300027571	Estuarine	MNESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDMVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0208304_100162266	3300027751	Estuarine	LSMSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0307488_100020813	3300031519	Sackhole Brine	MSESTTNPKAYLNGSYVNFERDGKRATGFVSEVFDEGFAVDTVVHDDKGFPNHNTDYTVFVKSEEVYR
Ga0307488_100139573	3300031519	Sackhole Brine	MSELTTNPKAYLNGSYVKFERNGKRTTGFVSEVFDEGFGVDVVVHDDKRFPLHNTDYTVFVKTAEAFV
Ga0307488_100146883	3300031519	Sackhole Brine	MSELTTNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFSVDMVVHNDKGFPNHNTDYTVFVKTDEAFR
Ga0307488_100533474	3300031519	Sackhole Brine	MSELTTNPKAYMNGSFVNFERNGKRATGFVSEVFDEGFAVDMVVHNDNRFPAHNTDYTVFVKTASVSA
Ga0307488_100891456	3300031519	Sackhole Brine	MSELTTNPKAYLNGSYVNFERNGKRSTGFVSEVFDEGFAVDMVVHNDSGFPGHNTDYTVFVKTDEVYR
Ga0307488_104153033	3300031519	Sackhole Brine	MSELITNPKAYLNGSYVNFERNGKRATGFVSEVFDEGFAVDMVVHDDKGFPGHNTDYTIFVKDAFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters