NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F100463

Metagenome / Metatranscriptome Family F100463

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100463
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 149 residues
Representative Sequence MSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Number of Associated Samples 55
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 58.82 %
% of genes near scaffold ends (potentially truncated) 39.22 %
% of genes from short scaffolds (< 2000 bps) 98.04 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (91.176 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(49.020 % of family members)
Environment Ontology (ENVO) Unclassified
(49.020 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(52.941 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.
1Ga0099791_100856882
2Ga0066710_1001726803
3Ga0105066_10324561
4Ga0105068_10665961
5Ga0105058_10751061
6Ga0127461_10882642
7Ga0127454_10415611
8Ga0127453_10516181
9Ga0127497_10799941
10Ga0127458_10855052
11Ga0127458_11090461
12Ga0127460_10373581
13Ga0127452_10454331
14Ga0127452_10662142
15Ga0127498_10468801
16Ga0127493_11686241
17Ga0127455_11451872
18Ga0126321_10343511
19Ga0126321_10532102
20Ga0127503_107339162
21Ga0126379_108602171
22Ga0150985_1039025361
23Ga0137369_109911191
24Ga0134054_11402981
25Ga0134052_12912221
26Ga0134057_12059751
27Ga0134057_13002251
28Ga0134048_11538761
29Ga0134055_11883862
30Ga0134053_11243721
31Ga0134053_12686041
32Ga0134060_14498661
33Ga0137394_107054021
34Ga0137403_103636341
35Ga0184645_10869331
36Ga0184645_11641841
37Ga0184645_11989541
38Ga0184643_10089701
39Ga0184646_13560212
40Ga0184646_14934961
41Ga0184646_14967491
42Ga0184644_17578091
43Ga0184642_13583151
44Ga0184642_13755922
45Ga0184642_14863951
46Ga0222624_10547611
47Ga0209887_10368231
48Ga0209590_103394081
49Ga0102757_100437621
50Ga0102757_114268521
51Ga0308203_10033091
52Ga0308203_10060933
53Ga0308203_10376581
54Ga0308205_10123971
55Ga0308205_10135741
56Ga0308205_10140391
57Ga0308205_10156651
58Ga0308205_10165571
59Ga0308205_10229351
60Ga0308205_10570122
61Ga0308202_10284641
62Ga0308206_10009421
63Ga0308206_10070253
64Ga0308206_10088971
65Ga0308206_10730841
66Ga0308206_11557691
67Ga0308206_11697041
68Ga0308206_11770521
69Ga0308206_11923891
70Ga0308206_11951411
71Ga0308200_10451391
72Ga0308200_10574331
73Ga0308200_10711811
74Ga0308200_10983971
75Ga0308200_11636011
76Ga0308196_10287031
77Ga0102760_107315931
78Ga0102760_109277491
79Ga0308189_101146181
80Ga0308189_101784821
81Ga0308189_104295061
82Ga0308192_10922931
83Ga0308201_100395901
84Ga0308201_100980602
85Ga0308201_101872081
86Ga0308204_100883151
87Ga0308204_101228741
88Ga0308204_101468031
89Ga0308204_102381611
90Ga0308204_102671451
91Ga0308204_103169861
92Ga0308197_100695942
93Ga0308197_100820221
94Ga0308197_102360451
95Ga0308197_103007791
96Ga0308197_104221491
97Ga0308193_10723421
98Ga0308188_10129541
99Ga0308187_104262681
100Ga0308187_104396911
101Ga0308194_100431421
102Ga0308186_10229791
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 7.19%    β-sheet: 35.95%    Coil/Unstructured: 56.86%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120140MSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCLSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
8.8%91.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Grasslands Soil
Soil
Groundwater Sand
Avena Fatua Rhizosphere
11.8%2.9%49.0%4.9%20.6%3.9%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0099791_1008568823300007255Vadose Zone SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVAATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPLTWGVADCL*
Ga0066710_10017268033300009012Grasslands SoilMSSTFRVMFVATLGVCMSVSLIIPTTSSPAGLPASVLPVASPDTPTPSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDSLPVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVANCL
Ga0105066_103245613300009822Groundwater SandMLVAALGVYMSMTLIIPTTSSPARLPASALPIVSPDTLTTSSMGYRDSPVVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVADCL*
Ga0105068_106659613300009836Groundwater SandMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYIGHQNSPVVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNKRSVQEVLTERALAEPPLTWGVADCL*
Ga0105058_107510613300009837Groundwater SandMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYIGHQNSPVVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTHEGQRLILYLAPTVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSDCL*
Ga0127461_108826423300010084Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPAHRTVAATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLAEPPLTWGVADCL*
Ga0127454_104156113300010089Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0127453_105161813300010102Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGVQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL*
Ga0127497_107999413300010109Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDRLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVADCL*
Ga0127458_108550523300010112Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPAHRTVAATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLAEPPLTWGVADCL*
Ga0127458_110904613300010112Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTECALAEPPLTWGVADCL*
Ga0127460_103735813300010114Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDRLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0127452_104543313300010119Grasslands SoilVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPAHRTVAATVLAVDRQIDQLKLQTHEGQRLVLYLAPVVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0127452_106621423300010119Grasslands SoilSRFRVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLAEPPLTWGVADCL*
Ga0127498_104688013300010124Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVL
Ga0127493_116862413300010130Grasslands SoilSRFRVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPAHRTVAATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0127455_114518723300010132Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLAEPPLTWGVADCL*
Ga0126321_103435113300010145SoilMLVAALGICMSVTLIIPTTSSPAGLRTSVLPIASSETPITSSIGHQDSPIVTLTVHAMAPEKIKVSDPARRTVQATVLAVDRQIDQLILQTHEGQRLVLYLAPSDLDGLQAGKQIMLQVNQRSVQEVL
Ga0126321_105321023300010145SoilMLVAALGVCMSVTLIIPTLSSAAGLRADILPVASPDTPITSFIRHQDSPIVTLTVHAMVPEKIKVSDPAHRTVSATVLAVDKQIYQVKLQTHEGQRLALYLAPATFDVLQVGKQIILQVAQRSVREVLTERAVAESSLAGGISDDYL*
Ga0127503_1073391623300010154SoilMLVAALGVYMSVTLIIPMTSSPAGLPARVLPVASPETPTTSSMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPAWGVSACF*
Ga0126379_1086021713300010366Tropical Forest SoilMLVAALVVYMGVTLMSPTMSSPAELLARVQPVASPDTPTTSYRRPQASSIVTLNVYAMVPEKIKVSDPAHGTVPATVLAIDRQLDQLKLQTHEGQRLVLYLAPEVLQDLQVGKQIMLQVNQRSVQEVLTE
Ga0150985_10390253613300012212Avena Fatua RhizosphereMVEGGYTMSSIFRVLLVAALVVYMNVTLILPATSSPAMLFASILPVASPDTPTTSYIGPQDSPILTLTVHAMVPEKIKVSDLARRRVQATVLAVDRQIDQLKLQTQEGQRLVLYLAPSVLDGLQVGKQIMLQVNQRSVQEVLTERSLAESPPTWGVSNCL*
Ga0137369_1099111913300012355Vadose Zone SoilMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPTPSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGLSACL*
Ga0134054_114029813300012390Grasslands SoilMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLAEPPLTWGVADCL*
Ga0134052_129122213300012393Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVA
Ga0134057_120597513300012396Grasslands SoilSSRFRVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDRLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0134057_130022513300012396Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTLGVAACL*
Ga0134048_115387613300012400Grasslands SoilGGDTMSSRFRVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSPDTPSTPYMGHQGSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPVVLDVLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL*
Ga0134055_118838623300012401Grasslands SoilMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVGSPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVANCL*
Ga0134053_112437213300012406Grasslands SoilSSRFRVMLVAALGVCMSVTLVIPTTSSPAGLLARVQPVGSLDTPSTPYMGHQDSPIVTLAVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVAACL*
Ga0134053_126860413300012406Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTREGQRLVLYLAPAVLDSLPVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL*
Ga0134060_144986613300012410Grasslands SoilMLVAALGVCMSVALIIPTTSSPAGLLARVQPVASPDTPSTPYMGHQNSPIVTLTVHAMVPEKIKVSDPTHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVADCL*
Ga0137394_1070540213300012922Vadose Zone SoilTSSPAGLLARVQPVGSPDTPSTPYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPSVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPLTWGVADCLQPLWPRRPCERHPPVPAPPRGQSGW*
Ga0137403_1036363413300015264Vadose Zone SoilMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVGSPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAEPPLTWGVADCL*
Ga0184645_108693313300019233Groundwater SedimentTMSSTFRVMLGAALGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYIGYQDSHIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0184645_116418413300019233Groundwater SedimentMSATFRATHGVALGVCMSVTLLILMMSSPARLLASALPGASPGAPSISHMEQNGPIVTLTVHAMVPEKIKVSDPAHRTVRAAVLAVDTQISQVKLQTHEGQRLVLYLEPAVCDGLQVGQQILLYVGQRSVQDVLTERSLAGAPSPWEACDYCL
Ga0184645_119895413300019233Groundwater SedimentMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAALDGLQVGKQIMLQVNQRSVQEVLTERALTESPSTWGVADCL
Ga0184643_100897013300019255Groundwater SedimentMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLVRVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0184646_135602123300019259Groundwater SedimentRATHGVALGVCMSVTLLILMMSSPARLLASALPGASPGTPSISHMEQNGPIVTLTVHAMVPEKIKVSDPAHRTVRAAVLAVDTQISQVKLQTHEGQRLVLYLEPAVCDGLQVGQQILLYVGQRSVQDVLTERSLAGAPSPWEACDYCL
Ga0184646_149349613300019259Groundwater SedimentAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYIGHQNSPVVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPTVLDGLQVGKQIVLQVNQRSVQEVLTESSVAGSPSACGVFDYCL
Ga0184646_149674913300019259Groundwater SedimentMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVGSPDTPSTSYLGHQGSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTE
Ga0184644_175780913300019269Groundwater SedimentMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPARRMVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAALDDLQVGKQIMLQVNRQSVQEVLTERSLTESPPTWGVANCL
Ga0184642_135831513300019279Groundwater SedimentMFSISRVMLVAVLGVCMSVTFIIPTTSSPAGLPARLQPVASPEPPSTSYMGHQHSPIATLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLPVGKQIMLQVNQRSVQEVLTERSLTESSSTWGVADCL
Ga0184642_137559223300019279Groundwater SedimentMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Ga0184642_148639513300019279Groundwater SedimentMSSTFRVMLVAALGVCISVTLSIPATSSPAGLLARVQPVASPETPSTSYMGHQASPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAALDGLQVGKQIMLQVNQRSVQEVVTERSLTESPPTWGVADCL
Ga0222624_105476113300021951Groundwater SedimentVTLIIPTTSSSDGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDLAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVANCL
Ga0209887_103682313300027561Groundwater SandMSSTFRVMLVAALGVYMSMTMIIPTTSSPARLPASALPIVSPDTLTTSSMGYRDSPVVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNKRSVQEVLTERALAEPPLTWGVADCL
Ga0209590_1033940813300027882Vadose Zone SoilMSSTLRVMLVAALGICMSVSLIIPTTSSPAGLPARVQPVGSPDTPSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERALAESPSTWGVADCL
Ga0102757_1004376213300030785SoilMSSTFRVMLIAALGICMSVTLIIPTTSSPAGLRTSVLPIASPGTPGTSSMGHQDSPSVTLTVHAMAPEKIKVSDPARRTVQATVLVVDRQIDQLKLQTHEGQRLVLYLAPSVLDGLQVGKQIMLQVNQRSVQEVLTECPLAESPSTWGVSNNCM
Ga0102757_1142685213300030785SoilMSSTFRVMLVAALVVYMSVTLIIPTTSSPAGLLARVQPVASPATPIPSYMGYQDSPMVTLTVHAMVPEKIKMSDPAHRTVQATVLAVDRQIDQLKLQTHEGQRLVLYLAPANLDGLHVGKQILLQVSQRSVQEVLTERSPAESPPTWGVANCL
Ga0308203_100330913300030829SoilMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308203_100609333300030829SoilMLAAALGVCMSVTLVIPTTSSPAGLPARVQPVGLPETPSTSSIGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGVQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Ga0308203_103765813300030829SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLVSVLPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLPVGKQIMLQVNQRSVQEVLTERSLTESSSTWGVADCL
Ga0308205_101239713300030830SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGVQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL
Ga0308205_101357413300030830SoilMSSTFRVMLVAALGVCISVTLSIPATSSPAGLLARVQPVASPETPSISYMGHQASPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAALDGLQVGKQIMLQVNQRSVQEVVTERSLTESPPTWGVADCL
Ga0308205_101403913300030830SoilMMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMRHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVITERSLTESPSTWGISACL
Ga0308205_101566513300030830SoilMSSAFRVMLVAALGVCMSVSLIIPTTSSSAGLLARVQPVGSPDTPSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTEPPLTWGVSDCL
Ga0308205_101655713300030830SoilLVAALGVCMSATLIIPTTSSPAGLLARLQPVASPDTPSTPYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDKQIDQLKLQTHAGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSDCL
Ga0308205_102293513300030830SoilTLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGPQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308205_105701223300030830SoilVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKPPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDRQIYQVKLQTHEGQRLALYLAPAIFDGLQVGKQIILQVDQRSVREVLTERSVAGSLSACGVSDSCL
Ga0308202_102846413300030902SoilMMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308206_100094213300030903SoilMMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQNSPIVTLTVHAMVPEKIKVSDLAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQDVVTERSLTESPSTWGISACL
Ga0308206_100702533300030903SoilMSSRFRVMLVAALGVYMSVTLIIPMTSSPAGLPARVQPVASPETPSTSSIGHQDSPIVTLTVYAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGVQVGKQIMLQVNQRSVQEVLTERSLTESPLTWGVADCL
Ga0308206_100889713300030903SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Ga0308206_107308413300030903SoilCSVHGQDAVGAICGFGPGYTYPTRLFVIVGGGYAMFSTFRVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKPPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDRQIYQVKLQTHEGQRLALYLAPAIFDGLQVGKQIILQVDQRSVREVLTERSVAGSLSACGVSDSCL
Ga0308206_115576913300030903SoilMMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSFMRHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308206_116970413300030903SoilMSSAFRVMLVAALGVCMSVSLIIPTTSSPAGLLARVQPVGSPDTLSTSYMGHQGSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTEPP
Ga0308206_117705213300030903SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSSDGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQEGKQIMLQVNQRSVQEVLTERSLTES
Ga0308206_119238913300030903SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYRGYQDSHIVTLTVHAMVPEKIKVSDPAHRTVSATVLAVDRQIYQVKLQTHEGQRLALYLAPAIFDGLQVGKQIILQVDQRSVREVL
Ga0308206_119514113300030903SoilMSATFRATHGVTLGVCMCVTLLILMMSSPARLLASALPGASPDTPSISHREQNGPIVTLTVHAMAPEKIKVSDPAHRTVRATVLAVDTQISQVKLQTHEGQRLVLYLEPAVCDGLHVGQQIILYVGQRSVRDVLTERSL
Ga0308200_104513913300030905SoilMSSAFRVMLVAALGVCMSVSLIIPTTSSSAGLLARVQPVGSPDTLSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTEPPLTWGVCDCL
Ga0308200_105743313300030905SoilMSSTFRVMLVAALGVYMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAFLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Ga0308200_107118113300030905SoilMSSISRVMLVAVLGVCMSVTFIIPTTSSPAGLPARLQPVASPEPPSTSYMGHQHSPIATLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVLTERSLTESSSTWGVADCL
Ga0308200_109839713300030905SoilMSSTFRVMLVAALGVCMSMILMIPSTSSPAGLRTSVLPVASPETPITSSMGHQDSPLVTLTVHAMAPEKIKLSDPAHRTVQATVLAVDRQIDQLKLQTHEGQRLVLYLAPSVLDGLQAGKQIMLQVNQRSVQEVLTECPLAESPSTWGVSNNCM
Ga0308200_116360113300030905SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLILYLAPAVLDGLQVGKQIMLQVNRRSVQEVLTERSLTES
Ga0308196_102870313300030989SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAFLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL
Ga0102760_1073159313300031039SoilMASMFRIVLTVALGVCMSVTSIIPMTSSAAGLRANILPVASPDTPIISSIRYQGSPTVTLTVHAMVPEKIKVSDPTRRTVSATVLAVDKEISQVKLQTHEGQRLALYLAPEVFDSLQVGKQIILQIDQQSVREVVTGRSVAGSSLACGVSDSCL
Ga0102760_1092774913300031039SoilMSSKFRVMLVAALVVYMSVTLMIPMTSSPAGLLARVQPVASPDTPIPSSMGHQDSLIITVTVHAMVPEKIKMSDPAHRTVQATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVSQRSVQEVLTERSLAESPPTWGVSNCL
Ga0308189_1011461813300031058SoilMFSTFRVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKPPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDKEISQVKLQTHEGQRLALYLAPALFDGLQVGKQIILQVAQRSVQEVIREHSGAGSATAGGVSDSYL
Ga0308189_1017848213300031058SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLVSVLPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSDCL
Ga0308189_1042950613300031058SoilMSSISRVMLVAVLGVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVS
Ga0308192_109229313300031082SoilMSSIFRVMLVAALGVCMSVTLIIPTTSSSDGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPARRMVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPASLDNLQVGKQIMLQVARRSVQEVLTKRSLT
Ga0308201_1003959013300031091SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSPAGLLVSVLPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAFLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSNCL
Ga0308201_1009806023300031091SoilGVCMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTEPPLTWGVCDCL
Ga0308201_1018720813300031091SoilSVHGQAAVGAICGFGPGYTYPTRLFVIIGGGYGMFSTFRVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKPPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDKEISQVKLQTHEGQRLALYLAPALFDGLQVGKQIILQVAQRSVQEVIREHSGAGSATAGGVSDSYL
Ga0308204_1008831513300031092SoilMMSSTFRVMLVAMLVVCMSVTLIIPTTSSSAGLLARVQPVGSPDTLSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308204_1012287413300031092SoilMFSTFRVMLVAALGVCISGTLSLPTMSSAAGLHANMQPVMSPDTPITSSIRHQDSPIITLTVHAMVPEKIKVSDPAHRTVSATVLAVDRQIYQVKLQTHEGQRLALYLAPAIFDGLQVGKQIILQVDQRSVREVLTERSVAGSSSACGVSDSCL
Ga0308204_1014680313300031092SoilMSSAFRVMLVAALGVCMSVSLIIPTTSSSAGLLARVQPVGSPDTPSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTEPPLTWGVCDCL
Ga0308204_1023816113300031092SoilMFSTFRVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKPPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDKEISQVKLQTHEGQRLALYLAPAIFDGLQVGKQIILQVDQRSVREVLTERSVAGSLSACGVSDSCL
Ga0308204_1026714513300031092SoilLILPTTSRPAGLLARVQPVASPDTLSTSYIGHQNSPVVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPTVLDGLQVGKQIVLQVNQRSVQEVVTERSLTESPPTWGVADCL
Ga0308204_1031698613300031092SoilMMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQNSPIVTLTVHAMVPEKIKVSDPAHRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLT
Ga0308197_1006959423300031093SoilMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPAAVLAVDKQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIMLQVNQRSVQEVVTERSLTESPSTWGISDCL
Ga0308197_1008202213300031093SoilMSSTFRVMRVAILSVCMSMILMIPSTSSPAGLRTSVLPVASPETPITSSMGRQDSPIITLTVHAMAPEKIKLSDPAHRTVQATVLAVDRQIDQLKLQTHEGQRLVLYLAPSVLDGLQAGKQIMLQVNQRSVQEVLTECPLAESPSTWGVSNNCM
Ga0308197_1023604513300031093SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSSAGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPARRMVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVANCL
Ga0308197_1030077913300031093SoilHGQDAVGAICGFGLGYTYPTRLFVIIGGGYAMFSTFRVMLVAALGVCISGTLSFSTMSSAAGLHANMQPVMSPDTPITSSTKSPDSPMVTLTVHAMVPEKIKVSDPDRRTVSATVLAVDKEISQVKLQTHEGQRLALYLAPALFDGLQVGKQIILQVAQRSVQEVIREHSGAGSATAGGVSDSYL
Ga0308197_1042214913300031093SoilMSSAFRVMLVAALGVCMSVSLIIPTTSSSAGLLARVQPVGSPDTLSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTE
Ga0308193_107234213300031096SoilPTTSSPAGLLVRVQPVASPDTPITSSMGHQDSPIVTLTVHAMVPEKIKVSDPAHRTVPAAVLAVDKQIDQLKLQTQEGQRLVLYLAPAALDGLQVGKQIMLQVNQRSVQEVVTERSLTESPPTWGVADCL
Ga0308188_101295413300031097SoilMSSTFRVMLVAALGVCMSVTLIIPTTSSSAGLLARVQPVASPDTPTTSHMGHQDSTIVTLTVHAMVPEKIKVSDPARRTVPATVLAVNRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVVTERSLTESPPTWGVADCL
Ga0308187_1042626813300031114SoilSSPAGLLARVQPVASPDTPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVANCL
Ga0308187_1043969113300031114SoilMSSTFRVMLVATLVVCMSVTLIIPTTSSPAGLLARVHPVASPDTPSTPYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGRQIM
Ga0308194_1004314213300031421SoilMSSTFRVMLVAALGVCMSVSLIIPTTSSSAGLLARVQPVGSPDTLSTSYLGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTQEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPSTWGVSDCL
Ga0308186_102297913300031422SoilMSSRFRVMLVAALGVYMSVTLIIPTTSSPAGLLARVQPVASPETPSTSYMGHQDSPIVTLTVHAMVPEKIKVSDPARRTVPATVLAVDRQIDQLKLQTHEGQRLVLYLAPAVLDGLQVGKQIMLQVNQRSVQEVLTERSLTESPPTWGVADCL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.