Metagenome / Metatranscriptome Family F100460

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Number of Associated Samples	83
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.628 % of family members)
Environment Ontology (ENVO)	Unclassified (36.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.804 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.67% β-sheet: 15.00% Coil/Unstructured: 48.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04632	FUSC	4.90
PF14534	DUF4440	1.96
PF03401	TctC	0.98
PF04392	ABC_sub_bind	0.98
PF02922	CBM_48	0.98
PF00484	Pro_CA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	4.90
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.98
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.98
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	97.06 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	97.06 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17277361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101626229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101626789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300000559\|F14TC_104232595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10097034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10169971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1061738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1032172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1052834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300004479\|Ga0062595_101352444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300005187\|Ga0066675_10863782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300005332\|Ga0066388_108548073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300005363\|Ga0008090_15786106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300005434\|Ga0070709_10018293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4032	Open in IMG/M
3300005457\|Ga0070662_100485243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300005555\|Ga0066692_10642311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300005559\|Ga0066700_11041664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300005568\|Ga0066703_10541858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300005764\|Ga0066903_104768541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300005764\|Ga0066903_105883015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300005764\|Ga0066903_106492713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300005764\|Ga0066903_107579768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300007255\|Ga0099791_10632264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300007258\|Ga0099793_10703787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300009038\|Ga0099829_10037421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3508	Open in IMG/M
3300009100\|Ga0075418_12180142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300009143\|Ga0099792_10252291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300009162\|Ga0075423_12690267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300009553\|Ga0105249_10699475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300009792\|Ga0126374_11007462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300009792\|Ga0126374_11841166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010043\|Ga0126380_10013999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3685	Open in IMG/M
3300010043\|Ga0126380_11697561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300010046\|Ga0126384_11338412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300010046\|Ga0126384_12339924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010048\|Ga0126373_11844097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300010048\|Ga0126373_12140711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300010048\|Ga0126373_12753158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010303\|Ga0134082_10298625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300010366\|Ga0126379_11319759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300010366\|Ga0126379_11492759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300010366\|Ga0126379_13123288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010376\|Ga0126381_104315245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010398\|Ga0126383_11911186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300011269\|Ga0137392_11299119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300012096\|Ga0137389_11130670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300012204\|Ga0137374_10143249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2150	Open in IMG/M
3300012205\|Ga0137362_11559716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012209\|Ga0137379_10558383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300012361\|Ga0137360_10111219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2115	Open in IMG/M
3300012918\|Ga0137396_10228837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1370	Open in IMG/M
3300012930\|Ga0137407_10975203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300012971\|Ga0126369_10496315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1278	Open in IMG/M
3300012971\|Ga0126369_10856687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300012971\|Ga0126369_12263758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300015242\|Ga0137412_10828582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300015372\|Ga0132256_100625866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300015373\|Ga0132257_102807119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300015374\|Ga0132255_106218766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300016294\|Ga0182041_10133545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1886	Open in IMG/M
3300016319\|Ga0182033_12161183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300016371\|Ga0182034_10937136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300016404\|Ga0182037_11410892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300016404\|Ga0182037_11842667	Not Available	541	Open in IMG/M
3300016445\|Ga0182038_11452111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300020581\|Ga0210399_10972536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300021432\|Ga0210384_10384854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1263	Open in IMG/M
3300021439\|Ga0213879_10008874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2123	Open in IMG/M
3300021560\|Ga0126371_12791485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300021560\|Ga0126371_13465526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300025916\|Ga0207663_10931848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300025928\|Ga0207700_10175810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1789	Open in IMG/M
3300026494\|Ga0257159_1089300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300026498\|Ga0257156_1044103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300027527\|Ga0209684_1025457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908	Open in IMG/M
3300027654\|Ga0209799_1020416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300027874\|Ga0209465_10135849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300027903\|Ga0209488_10699201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300028787\|Ga0307323_10363251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300031446\|Ga0170820_17669222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031573\|Ga0310915_10576978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300031640\|Ga0318555_10747244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300031719\|Ga0306917_11329700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300031719\|Ga0306917_11422913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300031744\|Ga0306918_10256616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1336	Open in IMG/M
3300031768\|Ga0318509_10056138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2023	Open in IMG/M
3300031890\|Ga0306925_10304047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1715	Open in IMG/M
3300031912\|Ga0306921_12308427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300031942\|Ga0310916_10913700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300031942\|Ga0310916_11588390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031945\|Ga0310913_10049400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2741	Open in IMG/M
3300032001\|Ga0306922_10166574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2361	Open in IMG/M
3300032008\|Ga0318562_10624491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300032051\|Ga0318532_10024185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1983	Open in IMG/M
3300032059\|Ga0318533_10242059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1300	Open in IMG/M
3300032063\|Ga0318504_10415704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300032063\|Ga0318504_10583658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300032065\|Ga0318513_10386730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300032066\|Ga0318514_10688864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300032089\|Ga0318525_10591000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300032180\|Ga0307471_100905892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1049	Open in IMG/M
3300032261\|Ga0306920_100746953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1439	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.14%
Host-Associated	Host-Associated	6.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.14%
Plants	Host-Associated → Plants	6.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.37%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01884150	2088090014	Soil	MSSLQGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGKTFSITPGRAKGDTSLQIEALGARDLGP
INPhiseqgaiiFebDRAFT_1016262291	3300000364	Soil	MSSLQGKSISSIGVIVGFALIVSNLAAAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSTQIE
INPhiseqgaiiFebDRAFT_1016267892	3300000364	Soil	MSSLQAKPIGSIGAIVAIASMVSNLAMAQSQALPPGTIADNDSIFIDGKTFAI
F14TC_1042325951	3300000559	Soil	MSTLQGKSIGFIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIE
AF_2010_repII_A1DRAFT_100970342	3300000597	Forest Soil	MSSLQGKSISSIAAIVGIASIVSNLAVAQSQTLRPATIADNDSIYIDGKTFAITPGRAKGDTAAQIEALGARDLGP
AF_2010_repII_A1DRAFT_101699711	3300000597	Forest Soil	MSGLQGKSISSIAAIVGIASIVSNLAVAQSQTPPPATIADNDSIYIDGKTFAITPGRAKGDTSAQI
AF_2010_repII_A100DRAFT_10617381	3300000655	Forest Soil	MSSLQAKSISSIAAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPG
AF_2010_repII_A10DRAFT_10321721	3300000816	Forest Soil	MSGLQGKSIGSIGAIVGIASIVSNLTAAQSQTLPPATIADNDSIYIDGKTFA
AP72_2010_repI_A100DRAFT_10528342	3300000837	Forest Soil	MSGLQAKSIGFIGAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKTF
Ga0062595_1013524442	3300004479	Soil	MSGFQGKSISFIGAIVGIASIVSNLAVAQSQTLPPATIADNDS
Ga0066675_108637822	3300005187	Soil	MSGFQGKSISFIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIY
Ga0066388_1085480731	3300005332	Tropical Forest Soil	MSGLQGKSISSIAAIVGIASIVSNLAVAQSQTPPPATIADNDSIYIDGKTFA
Ga0008090_157861062	3300005363	Tropical Rainforest Soil	MRILQRKSISAIGAIIGIASIGSTLAVAQSQTLPAAIADNDSIYIDGK
Ga0070709_100182935	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLQGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGKTFSITPGRAKG
Ga0070662_1004852432	3300005457	Corn Rhizosphere	MSSLQGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGKTFS
Ga0066692_106423112	3300005555	Soil	MSGFQGKSISFIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARD
Ga0066700_110416642	3300005559	Soil	MSTLQGKSISSIGTIFSIASIVSNLTVAQSQTLPPATIADNDSI
Ga0066703_105418581	3300005568	Soil	MSGFQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDLGPG
Ga0066903_1047685411	3300005764	Tropical Forest Soil	MSALQGKSISTIGAIVGVASIASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTAAQIE
Ga0066903_1058830152	3300005764	Tropical Forest Soil	MSTLQGKSISFIGAIVGMASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRA
Ga0066903_1064927131	3300005764	Tropical Forest Soil	MEKGMSTLQGKSISAVGVIVAIASIVSNLAVAQSQTLPPAAIADNDSIYIDGKTFAITPGRAKGDIS
Ga0066903_1075797681	3300005764	Tropical Forest Soil	MSTLQGKSISSIGALVGIASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRA
Ga0099791_106322642	3300007255	Vadose Zone Soil	MSSLQGKSISCIGAIVGIASIVSNLALAQSQTLPPAAIADNDSIYIDGKTFAITPGRA
Ga0099793_107037872	3300007258	Vadose Zone Soil	MSGFQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYI
Ga0099829_100374214	3300009038	Vadose Zone Soil	MEKGMSGLQGKSIGSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAI
Ga0075418_121801422	3300009100	Populus Rhizosphere	MSSLQGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGRTFSITPGRAKGDTSAQIEALGARD
Ga0099792_102522912	3300009143	Vadose Zone Soil	MSGFQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSA
Ga0075423_126902672	3300009162	Populus Rhizosphere	MSTLQGKSISSIGTIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITP
Ga0105249_106994751	3300009553	Switchgrass Rhizosphere	MSSLQGKSISFVGAIVGIASIASNLAMAQSQALPPAAIADNDSIFIDGKTFSITPGRAKGDTSLQIEA
Ga0126374_110074621	3300009792	Tropical Forest Soil	MSALQGKSISTIGAIVGVASIASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTAAQIEALGARDL
Ga0126374_118411661	3300009792	Tropical Forest Soil	MSGLQGKSIGSIGAIVGIASIVSNLAVAQSQTPPPATIADNDS
Ga0126380_100139994	3300010043	Tropical Forest Soil	MEKGMSTLQGKSISAVGVIVAIASIVSNLAVAQSQTLLPAAIADNDSIYIDGKTFAI
Ga0126380_116975612	3300010043	Tropical Forest Soil	MSALQGKSIGSVGAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Ga0126384_113384121	3300010046	Tropical Forest Soil	MSTLQGKSISSIAAIVGIASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Ga0126384_123399242	3300010046	Tropical Forest Soil	MSALQGKSIGSVGAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDT
Ga0126373_118440972	3300010048	Tropical Forest Soil	MSGLQGKSISSIAAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Ga0126373_121407111	3300010048	Tropical Forest Soil	MEKGMSTLQGKSISAVGVIVAIASIVSNLAVAQSQTLPPAAIADNDSIY
Ga0126373_127531581	3300010048	Tropical Forest Soil	MSGLQGKSISSIGAIVGIASIVSNLTAAQSQTLPPATIADNDSIYIDGKT
Ga0134082_102986251	3300010303	Grasslands Soil	MSSQGKSISFIGAIVGVASIASNLAVAQSQTPPPAAIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARD
Ga0126379_113197591	3300010366	Tropical Forest Soil	MSGLQGKSISSIAAIVGIASIVSNLAVAQSQTPPPATIADNDSIYIDGKT
Ga0126379_114927591	3300010366	Tropical Forest Soil	MSSLQGKSISSIAAIVGIASIVSNPAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDT
Ga0126379_131232881	3300010366	Tropical Forest Soil	MSTLQGKSISSIAAIVGIASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTAAQIEALGARD
Ga0126381_1043152451	3300010376	Tropical Forest Soil	MSSLQRKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIY
Ga0126383_119111862	3300010398	Tropical Forest Soil	MSSFQGKSISSIAAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKTFAITP
Ga0137392_112991192	3300011269	Vadose Zone Soil	MSSLQGKSISCIGAIVGIASIVSNLALAQSQTLPPAAIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGA
Ga0137389_111306702	3300012096	Vadose Zone Soil	MSSLQGKSISCIGAIVGIASIVSNLALAQSQTLPPA
Ga0137374_101432493	3300012204	Vadose Zone Soil	MSTLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGK
Ga0137362_115597161	3300012205	Vadose Zone Soil	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTS
Ga0137379_105583831	3300012209	Vadose Zone Soil	MSGFQGKSISFIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEA
Ga0137360_101112194	3300012361	Vadose Zone Soil	MEKGMSGLQGKSIGSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYI
Ga0137396_102288372	3300012918	Vadose Zone Soil	MSGFQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDL
Ga0137407_109752031	3300012930	Vadose Zone Soil	MSTLQRKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEA
Ga0126369_104963152	3300012971	Tropical Forest Soil	MEKGMSSLQGKSIGTVGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTS
Ga0126369_108566872	3300012971	Tropical Forest Soil	MSSSQGKSIASIGAFVGIASIVSSLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Ga0126369_122637581	3300012971	Tropical Forest Soil	MSSLQRKSISGIGAIAGIASIVSNLAVAQSQTPPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGA
Ga0137412_108285821	3300015242	Vadose Zone Soil	VEKKMSSLQGKSISSIGAIVGIASIGSSLALAQSQTLPAAIADNDSIYIDGKTFAITPGRAKGDTSLQLDRIE
Ga0132256_1006258663	3300015372	Arabidopsis Rhizosphere	MSSQGKSISFIGAIVSVASIVSNLAMAQSQTPPPTVIADNDSIYIDGK
Ga0132257_1028071191	3300015373	Arabidopsis Rhizosphere	MSSQGKSISFIGAIVSVASIVSNLAMAQSQTPPPTVIADNDSIYIDGKTFSITPG
Ga0132255_1062187661	3300015374	Arabidopsis Rhizosphere	MSSLQAKPIGSIGAIVAIASMVSNLAMAQSQALPPAAIADNDSIFIDGKTFAIT
Ga0182041_101335454	3300016294	Soil	MRALQGKSISTIGAIVGMASIASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDLGPG
Ga0182033_121611832	3300016319	Soil	MSGLQGKSISFIGAIVGTASIVSNLAVAQSQTLPPATIADNDSIYIDGKTF
Ga0182034_109371361	3300016371	Soil	MSGLQGKSISSIGAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTA
Ga0182037_114108921	3300016404	Soil	MSSFQGQSIRAVGAIFGVASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDL
Ga0182037_118426672	3300016404	Soil	MSSLQGKSIGSIGAIVGIASIVSNLAVAQSQTLPPATIADND
Ga0182038_114521111	3300016445	Soil	MSSFQGKSIRAVGAIFGVASIVSNFAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARD
Ga0210399_109725361	3300020581	Soil	MSSLQGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGKTFSITPGRAKGDT
Ga0210384_103848541	3300021432	Soil	MSGFQGKPISSIAAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAIT
Ga0213879_100088741	3300021439	Bulk Soil	MSALQGKSIGSIGAIVGIASIMSNLGAAQSQTLPPATIADNDSIYIDGKTFAITPGRAK
Ga0126371_127914851	3300021560	Tropical Forest Soil	MSSLQGKSIGTVGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTS
Ga0126371_134655262	3300021560	Tropical Forest Soil	MSGLQGKSIGSIGAIVGIASIMSNLAAAQSQTLPPATIADNDSIYIDGKTFAITP
Ga0207663_109318482	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLQAKPIGSIGAIVAIASTMSNLAMAQSQALPPGTIADNDSIFIDGKTFAITPGRAKGDTSTQIE
Ga0207700_101758101	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSI
Ga0257159_10893001	3300026494	Soil	MSGFQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFA
Ga0257156_10441031	3300026498	Soil	MSSLQGKSISCIGAIVGIASIVSNLALAQSQTLPPAAIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDLG
Ga0209684_10254572	3300027527	Tropical Forest Soil	MSSLQRKSISGGAIVGIASIVSTLAVAQSQTLPPATIADNDSIYID
Ga0209799_10204161	3300027654	Tropical Forest Soil	MSTLQGKSISFIGAIVGMASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTS
Ga0209465_101358492	3300027874	Tropical Forest Soil	MSSLQRKSISGIGAIAGIASIVSTLAAAQSQTLPPATIADNDSIY
Ga0209488_106992011	3300027903	Vadose Zone Soil	MSSLQGKSISSIGAIVGIASIGSSLALAQSQTLPAAIADNDSIYIDGKTFAITPGRAKGDTSLQIEA
Ga0307323_103632512	3300028787	Soil	MSSLHGKSISFVGAIVGIASIVSNLAMAQSQALPPAAIADNDSIFIDGKTFSITPGRAKGDTSLQIEALGARDL
Ga0170820_176692221	3300031446	Forest Soil	MSTLQGKSISSISAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARD
Ga0310915_105769781	3300031573	Soil	MSGLQGKSIGSISAIVGIASIVSNLAVAQSQTLPPATIADNDSIY
Ga0318555_107472442	3300031640	Soil	MSSLQGKSISSIGAIVGIASIVSNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEA
Ga0306917_113297001	3300031719	Soil	MSSLQGKSISSIGAIVGIASIVSNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQ
Ga0306917_114229132	3300031719	Soil	MSALQGKSISTIGAIVGMASLASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQIE
Ga0306918_102566162	3300031744	Soil	MSSFQGKSIRAVGAIFGVASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEAL
Ga0318509_100561381	3300031768	Soil	MSSLQGKSIGSVGAIVGIASIVSNLAAAQSQTLPPATIADNDSIYIDGKT
Ga0306925_103040473	3300031890	Soil	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAIT
Ga0306921_123084272	3300031912	Soil	MSGLQGKSIGSIGAIVGIASIVSTLAVAQSQTLPPATIADNDSIYIDGKTFA
Ga0310916_109137002	3300031942	Soil	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKG
Ga0310916_115883902	3300031942	Soil	MSALQGKSISTIGAIVGMASLASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEALGARDL
Ga0310913_100494001	3300031945	Soil	MSGLQGKSIGSISAIVGIASIMSNLAAAQSQTLPPATIADNDSIYIDGKTFAITP
Ga0306922_101665743	3300032001	Soil	MSSFQGKSIRAVGAIFGVASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTSAQ
Ga0318562_106244912	3300032008	Soil	MRALQGKSISTIGAIVGMASIASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTS
Ga0318532_100241851	3300032051	Soil	MRALQGKSISTIGAIVGMASIASNLAVAQSQTLPATIADNDSIYIDGKTFAITPGRAKGDTSAQIEAL
Ga0318533_102420591	3300032059	Soil	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAK
Ga0318504_104157041	3300032063	Soil	MSGLQGKSISSIGAIVGIASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRAKGDTLA
Ga0318504_105836581	3300032063	Soil	MSGLQGKSISSIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAI
Ga0318513_103867302	3300032065	Soil	MSTLQGKSISFIGAIVGMASIVSNLAVAQSQTLPATIADNDSIYIDGKSFAITPGRAKGDTSA
Ga0318514_106888641	3300032066	Soil	MSGLQGKSISSIGAIVGIASIASNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGRA
Ga0318525_105910002	3300032089	Soil	MRALQGKSISTIGAIVGMASIASNLAVAQSQTLPATIADNDSIYIDGKT
Ga0307471_1009058922	3300032180	Hardwood Forest Soil	MSGLQGKSISFIGAIVGIASIVSNLAVAQSQTLPPATIADNDSIYIDGKTFAITPGR
Ga0306920_1007469531	3300032261	Soil	MSGLQGKSIGSISAIVGIASIMSNLAAAQSQTLPPATIADN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences