Basic Information | |
---|---|
Family ID | F100401 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 58 residues |
Representative Sequence | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK |
Number of Associated Samples | 49 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 2.94 % |
% of genes near scaffold ends (potentially truncated) | 16.67 % |
% of genes from short scaffolds (< 2000 bps) | 80.39 % |
Associated GOLD sequencing projects | 49 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (88.235 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (36.274 % of family members) |
Environment Ontology (ENVO) | Unclassified (35.294 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (45.098 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 54.65% β-sheet: 0.00% Coil/Unstructured: 45.35% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
Powered by PDBe Molstar |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
All Organisms Unclassified |
Powered by ApexCharts |
⦗Top⦘ |
Visualization |
---|
Freshwater Freshwater Freshwater Lake Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Sediment Freshwater Freshwater To Marine Saline Gradient Estuary Water Estuarine Freshwater And Marine Estuarine Soil |
Powered by ApexCharts |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
EsDRAFT_101010361 | 3300000883 | Freshwater And Marine | CAVLIAVPAYAAILINPLGTGVRAQDAWFPLSVVVAIAISFITNHGE* |
Ga0071350_10258351 | 3300005069 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0068877_100853201 | 3300005525 | Freshwater Lake | MKFEVKTEPVCAVLATVPAYFAIVVVTLGTGVQAQDSWLPITVIVTIHAIAISFIYFK* |
Ga0079957_10186012 | 3300005805 | Lake | MKFEVKTEPVCAVLATIPAYFAIVVVTLGTGVQAQDSWLPITVIVTIHAIAISFIYFK* |
Ga0102914_11161702 | 3300007561 | Estuarine | MKFEIKTEPVCAVLIAVPAYAAIVIITLGSGVEAQDAWFPLSVIVTILAVGLSYVTPGK* |
Ga0102916_12150621 | 3300007585 | Estuarine | MKFEVKTEPLCAVLVVVPTYFAIVVVTLGTGVQAQDSWFSITAIVTTLAIAILFIYAK |
Ga0102895_11245301 | 3300007629 | Estuarine | MKFEIKTEPVCAVLIAVPAYAAIVIITLGSGVEAQDAWFPLSVIVTILAVGLSYVTPGK |
Ga0102912_11758701 | 3300007649 | Estuarine | MKFEIKTEPVCAVLIAVPAYAAVAVIVIATGVQAQDAWFPLSAIIVILAIGINYVSK* |
Ga0102852_11273952 | 3300007718 | Estuarine | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYYK* |
Ga0105736_10008302 | 3300007861 | Estuary Water | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWLPITVIVTIHAIAISFIYFK* |
Ga0105736_11752751 | 3300007861 | Estuary Water | MKFKVKTEPAVCAMLVVVLAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0105738_10734942 | 3300007953 | Estuary Water | STHHRMKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0105738_11087172 | 3300007953 | Estuary Water | HSAHYRMKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK* |
Ga0105740_11034741 | 3300007955 | Estuary Water | MKFEVKTEPVCAVLVAVPAYLAIVVITLGTGVRAQDSWFPITVIVTILAMAISFIYSQ* |
Ga0114348_10042303 | 3300008115 | Freshwater, Plankton | MKFDVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0114348_10050992 | 3300008115 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK* |
Ga0114348_10465882 | 3300008115 | Freshwater, Plankton | MKFEVKTEPVCTVLVFFPAYFTIVVVTLGTGVQAQESWFPITVIVMILAIAISFIYAK* |
Ga0114359_12878442 | 3300008122 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYLAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIYAK* |
Ga0114841_11567782 | 3300008259 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYLAIVVITLGTGVRAQDSWFPITVIVTILAMAISFIYSK* |
Ga0114349_10235733 | 3300008263 | Freshwater, Plankton | MKFEVKTEPVCTVLVFFPAYFTIVVVTLGTGVQAQDSWFPITVIVMILAIAISFIYAK* |
Ga0114349_10335321 | 3300008263 | Freshwater, Plankton | MKFEVKPEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITIIVTILAIAISFIYSK* |
Ga0114349_10384043 | 3300008263 | Freshwater, Plankton | MKFEIKTEPVCAVLISIPAYIAIVVITLHTGMKAEDAWLPLTVTLIIMYIGLFCVAPK* |
Ga0114349_10448652 | 3300008263 | Freshwater, Plankton | MKFEVKMEPVCAVLVVVPAYFAIVVITLGTGVQAQDSWFPITVLVTILAITISFVYSK* |
Ga0114349_10721652 | 3300008263 | Freshwater, Plankton | MKFEVRTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK* |
Ga0114349_10806701 | 3300008263 | Freshwater, Plankton | TEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILTIAISFVYSK* |
Ga0114349_11023681 | 3300008263 | Freshwater, Plankton | MKFEVKMEPVCAVLVANPAYFDIVVVTLGTVVQVQDSWFPITVIVTILTIAISFVYSK* |
Ga0114349_11045581 | 3300008263 | Freshwater, Plankton | MKFEIKTEPVCAVLIVVPAYAAVAVIVIATGVQAQDAWFPLSAIIVILAIGINYVSK* |
Ga0114349_11092742 | 3300008263 | Freshwater, Plankton | MAYDNHLLMKFEIKTEPVCAVLITVPAYAAIAVIVIATGVQAQDAWFPLSAIIVILAIGINYVSK* |
Ga0114349_11266752 | 3300008263 | Freshwater, Plankton | MKFEVTTEPVCAVLVAVPAYFAIVVVTLGTWVQAQDSWFPITVIVTILAIAISFIYVK* |
Ga0114349_11605721 | 3300008263 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVITLGIGLQAQDSWFPITIIVTILAIAISFVYSK* |
Ga0114349_11633531 | 3300008263 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVMILAIATSFLYSK* |
Ga0114349_12004142 | 3300008263 | Freshwater, Plankton | TEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0114349_12157091 | 3300008263 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILTIAISFVYSK* |
Ga0114349_12674782 | 3300008263 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAFFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0114349_12723032 | 3300008263 | Freshwater, Plankton | MGASLHHLLMKFEIKTEPVCAVLIAVPAYAAIAVIVIATGVQAQDAWFPLSAIIVILAIEINYVSK* |
Ga0114353_11479712 | 3300008264 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWFPITVIVTTLAIAISFVYSK* |
Ga0114361_10150863 | 3300008265 | Freshwater, Plankton | MKFEIKTEPVCAVLVVDPAYFAIIVITLDTGVQAQDSWFQITIVVTILAIAISFVYSK* |
Ga0114361_10216492 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVMILAIAISFVYSK* |
Ga0114361_10239332 | 3300008265 | Freshwater, Plankton | MKFEVRTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPIIIIVTILAIAISFIYSK* |
Ga0114361_10305462 | 3300008265 | Freshwater, Plankton | MLINLQGRYAHCQMKFEVKTEPVCAVLVAVPAYFAIIVVTLGTGVQAQDSWFPITVTILTIAISFVYSK* |
Ga0114361_10325312 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILTIAISFVYSK* |
Ga0114361_10412321 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAIPAYFAIVVITLGTGVQAQDSWFPIIVIVTILAIAISFVYSK* |
Ga0114361_10443901 | 3300008265 | Freshwater, Plankton | MKFEIKTEPVCAVLIAVPAYVAIAVVVIATDLQAQDAWFPLSGIVVILAIGMNYVSK* |
Ga0114361_10744881 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIYAK* |
Ga0114361_10986711 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTWVQAQDSWFPITVIVRILAIAISFIYAK* |
Ga0114361_11247051 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0114361_11402311 | 3300008265 | Freshwater, Plankton | MKFEVRTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAIS |
Ga0114361_11452251 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFPIVVITLGTGVQAQDSWFPITVIVTILTIAISFVYSK* |
Ga0114361_11815641 | 3300008265 | Freshwater, Plankton | KFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK* |
Ga0114361_12463392 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAIPAYFAIVVVTLGTGVQAQDSWFPITVIVTTLAIAISFVYSK* |
Ga0114361_12661151 | 3300008265 | Freshwater, Plankton | MKFEVKTEPVCAVLVAVPAYFAIAVITLGTGVQAQDSWFPITIIVTILAIAISFVYSK* |
Ga0102814_107473071 | 3300009079 | Estuarine | MKFEIKTEPLCAVIVAIPAYAAIVIITLATGVSAQDAWFPLSVIIAILWLALVTISFLTRHGK* |
Ga0102815_101429101 | 3300009080 | Estuarine | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK* |
Ga0102815_105002831 | 3300009080 | Estuarine | MKFEIKTEPVCAVLVTVASYIAIVVITLGTGGHPKESCFPITVILTILAIAISYIYFKK* |
Ga0102812_101118622 | 3300009086 | Estuarine | MKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWLPITVIVTIHAIAISFIYFK* |
Ga0129333_105577602 | 3300010354 | Freshwater To Marine Saline Gradient | MKFKIKMEPVCAVLIAVPADVAIMIIMLGTGVQAQDVWFPLSVIVMILAIGIAYMSSK* |
Ga0129333_112056611 | 3300010354 | Freshwater To Marine Saline Gradient | MKFEVKTEPVCAVLIAVPAYAATVIITLGTGVRDQDAWFPLSVIVAILVIAISFVTNHGK |
Ga0180037_10293521 | 3300019214 | Estuarine | MKFEVKTEPVCAVLATVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK |
Ga0207193_10419281 | 3300020048 | Freshwater Lake Sediment | MKFEIKTEPVCAVLVAVPAYFAIVVIKLGTGIQAQDSWFPITVIVTILAIAISFVYSK |
Ga0207193_10440432 | 3300020048 | Freshwater Lake Sediment | MKFEIKTEPVCAVLVVVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYTK |
Ga0207193_14515431 | 3300020048 | Freshwater Lake Sediment | MKFEIKTEPVCAVLVAIPAYFAIVVITLGTGVQAQDSWFPITVIVTILTIAISFVYTK |
Ga0211735_108763571 | 3300020162 | Freshwater | MKFEIKTEPVCAVLIAVPAYAAVVIIVIATGLPAQDAWFPLSVVMTILMIGLNYVSK |
Ga0211731_108596861 | 3300020205 | Freshwater | MKFEVKTEPVCTVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK |
Ga0211731_112426863 | 3300020205 | Freshwater | MNFEIKTKPVCAVLVAVPAYFAIIVNTLGTGVQAQDSWCPITVIVTILTIAISFIYTK |
Ga0208363_10034852 | 3300020503 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAISFVYSK |
Ga0208718_10538462 | 3300020565 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILTIAISFVYSK |
Ga0214162_10039162 | 3300021108 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWFPITVIVTILAIAISFIYSK |
Ga0210306_10659952 | 3300021312 | Estuarine | MKFEIKTEPVCAVLIAVPAYAAIDIITIGTGIQAQDASFPFAIVVTILAIGILVVTSGK |
Ga0210298_10498861 | 3300021328 | Estuarine | MKFEVRTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITIIVTILAIAISFIYAK |
Ga0210298_11930242 | 3300021328 | Estuarine | INLQGHYAHYRMKFEVKTEPVCAVLVALPAYLAIVVVTLGTGVQAQDSWFPITVIVTILAFAISFI |
Ga0210298_12269932 | 3300021328 | Estuarine | LIYKGHSAHYRMKFEVKTEPVCAVLVAVPAYFAIVVATLGTGVQAQDSWLPITVIVTIHAIAISFIYFK |
Ga0210307_11773461 | 3300021336 | Estuarine | MKFEIKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILAIAIS |
Ga0244777_101654813 | 3300024343 | Estuarine | MKFKVKTEPVCTVLVAVPAYFAIVVVTLGTGVQAQDSWFPIAIIMTVLAIAISFIYSK |
Ga0244775_114765402 | 3300024346 | Estuarine | IVAIPAYAAIVIITLATGVSTQDAWFPLSVIIAILWLALVTISFLTRHGK |
Ga0315905_104629212 | 3300032092 | Freshwater | MKFEVKTEPVCAVLATIPAYFAIVVVTLGTGVQAQDSWLPITVIVTIHAIAISFIYFK |
Ga0315905_108098981 | 3300032092 | Freshwater | MKFEIKTEPVCAVLIAVPAYTAIAVLVIATGVQAQDGWFPLSAIIVILAIGINYVSK |
Ga0315902_106561511 | 3300032093 | Freshwater | MKFEVKTEPVCAVLATIPAYFAIVVVTLGTGVQAQDSWLPITVIVMIHAIAISFIYFK |
Ga0316625_1019934221 | 3300033418 | Soil | MKFEVKTEPVCAVLVAVPAYAAIVIITLGTGVRAQDAWFPLSVIVAILVIAISFVTNHGK |
Ga0316616_1032118242 | 3300033521 | Soil | MKFEVKTEPVCAVLVAIPAYAAIVIITLGTGVRAQDAWFPLSVIVAILVIAISFITSHGK |
Ga0334989_0019631_2577_2753 | 3300033984 | Freshwater | MKFEIKTELVCAVLLAVPAYFAIVVIMLGTGVQAQDSWCLITVIVTILTIAISFVYTK |
Ga0334989_0028895_2534_2710 | 3300033984 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWFPITVIVTILTIAISFVYSK |
Ga0334989_0041476_820_996 | 3300033984 | Freshwater | MKFEVKTEPVCAVLVLVPAYFAIVVVTLGTGVQAQDSRFPITVIVTILAIAISFIYAK |
Ga0334989_0066505_830_997 | 3300033984 | Freshwater | MNFEIKTKPVCAVLVAVPAYFAIIVNTLGTGVQAQDSWCPITVIVTILTIAISFV |
Ga0334989_0098063_974_1150 | 3300033984 | Freshwater | MKFEIKTEPVCALLVTVPAYFVIVVIMLDAGVQAQDSWCPITVIVTILTIAISLVYTK |
Ga0334989_0122141_832_1008 | 3300033984 | Freshwater | MKFEIKTEPVCALLVTVPAYFAIVVIMLDTGMQAQDSWCPITVIVTILTIAISLVYTK |
Ga0334989_0156108_368_544 | 3300033984 | Freshwater | MKFEIKTEPVCAVLVAIPAYFAIVVITLGTGVQAQDSWCPITVIVTILTIAISFVYTK |
Ga0334989_0220317_591_767 | 3300033984 | Freshwater | MKFEIKTEPVCAVLVAVPAYFAIVVITLGTGVQAQDSWCPITVSVTILTIAISFVYTK |
Ga0334989_0394942_334_510 | 3300033984 | Freshwater | MKFEIKTEPVCAVLVVVPAYFAIVLITLGTGVQAQDSWFLTTVIVTILAIAISFVYTK |
Ga0334989_0395083_176_352 | 3300033984 | Freshwater | MKFEVKTEPVCTVLVAVPAYFAIVLITLGTGVQAQDSWFPITVIVTILAIAISFVYSK |
Ga0334998_0495923_416_592 | 3300034019 | Freshwater | MKFKIKMEPVCAVLIAVPANVAIMIIMLGTGVQAQDVWFPLSVIVMILAIGIAYMSSK |
Ga0334998_0715909_319_498 | 3300034019 | Freshwater | MKFEIKTEPVCAVLIAVPAYAAISVVVVATGVSAQDAWFPLGVIVVVLAIGLSYISPSK |
Ga0335005_0006500_500_676 | 3300034022 | Freshwater | MKFEVKTEPVCAVLVVVPAYFAIVVVTLGTGVQAQDSWFPITVIVTILAIAISFIFAK |
Ga0334983_0647465_1_171 | 3300034060 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVVVTLGTGVQAQDSWFPITVIVMILAIAISFVYS |
Ga0335001_0087650_182_361 | 3300034064 | Freshwater | MKFEVKTEPVCAVLIPVPAYAAIVIITLGTGVQAHDAWFPLFVVVAILVIGVSFVSSAK |
Ga0335001_0106637_320_502 | 3300034064 | Freshwater | MKFEVKTEPLCVVLVAVPAYAAIVIVTLGTGVRAQDTSFPLSVIVAILVIAISFVTNHGK |
Ga0335001_0404695_217_402 | 3300034064 | Freshwater | MRFEIKTEPVCAVLVAVPAYAAIVIITLSTGVRAQDAWFPLSVIVAILLIAISFISSSHG |
Ga0335025_0119622_1075_1254 | 3300034096 | Freshwater | MKFEIKTEPVCAVLIAVPAYAAIVIITIGTGIQAQDAWFPLAIVVTILAIGISVVTSGK |
Ga0335035_0157535_833_1009 | 3300034105 | Freshwater | MKFEVKTEPVCAVLVAVPAYFAIVLVTLGTGVQAQDSWFPITVIVTILAIAISFVYSK |
Ga0335051_0605936_138_311 | 3300034109 | Freshwater | MKFEIKTEPVCAVLIAVPAYAAIAIVVIATGVQAQDAWFPLSAIIVILAIGMNYVSK |
Ga0335017_0230420_556_732 | 3300034167 | Freshwater | MKFEIKAEPVCAVLVVVPAYFAIVLITLGTGVQAQDSWFLTTVIVTILAIAISFVYTK |
Ga0334997_0662492_274_450 | 3300034280 | Freshwater | MKFEIKTEPVCAVLVSVPAYIAIVVITLYTGMKAEDAWLPLTVTLVIMYIALFYIAPK |
Ga0335064_0891961_2_157 | 3300034357 | Freshwater | MKFEIKTEPVCAVLIAVPAYAAIVIITIGTGIQAQDAWFPLAIVVTILAIGT |
⦗Top⦘ |