Metagenome / Metatranscriptome Family F100362

Overview

Basic Information

• Family ID: F100362
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 102
• Average Sequence Length: 39 residues
• Representative Sequence: MDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLLYGF
• Number of Associated Samples: 25
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 24
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (97.059 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus (99.020 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 49.23%
  β-sheet: 0.00%
  Coil/Unstructured: 50.77%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00090	TSP_1	0.98
PF00483	NTP_transferase	0.98
PF00620	RhoGAP	0.98
PF14604	SH3_9	0.98
PF00432	Prenyltrans	0.98
PF00413	Peptidase_M10	0.98
PF10159	MMtag	0.98
PF11938	DUF3456	0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.98

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	100.00%

Category

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	100.00%

Type

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	99.02%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified	0.98%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	99.02%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified	0.98%

Habitat

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	97.06%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	1.96%
Cnidaria	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria	0.98%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300003317	Belize BBD 4	Host-Associated
3300008013	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008032	Coral microbial communities from Puerto Morelos, Mexico - Diporia T C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008034	Coral microbial communities from Puerto Morelos, Mexico - Diploria C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008035	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008037	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008038	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008039	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008040	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008041	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008042	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008043	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008045	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008046	Coral microbial communities from Puerto Morelos, Mexico - Diporia T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008047	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300010030	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella C C metagenome	Host-Associated
3300010031	Coral microbial communities from La Bocana,Puerto Morelos, Mexico - Diploria C A metagenome	Host-Associated
3300010033	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella T R C metagenome	Host-Associated
3300010034	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 1 metagenome	Host-Associated
3300010035	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 2 metagenome	Host-Associated
3300010394	Coral microbial communities from Florida Keys, Florida, USA - Orbicella T D metagenome	Host-Associated
3300022597	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T3 (Eukaryote Community Metatranscriptome)	Host-Associated
3300022598	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL C1 (Eukaryote Community Metatranscriptome)	Host-Associated
3300027103	APAL control metatranscriptome co-assembly	Host-Associated
3300027264	APAL treatment metatranscriptome co-assembly	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BLZ4_10354971	3300003317	Cnidaria	MDRDRVEVHKLAKKE*GQYQAILTEQAWSIKDLLYGSRGI
Ga0099809_100826191	3300008013	Coral	MDREGVEVHKLAKKERGQHPAILTEQAWSIKDLLYGF
Ga0099815_10024631	3300008032	Coral	MAQDKVEVHKHAKKERGQHPAILTEQAWSMKDLLYEIK
Ga0099815_10686091	3300008032	Coral	MGVDEVEVLKHAKKERGQYDPTILTKQA*SMKDLLY
Ga0099810_10772181	3300008034	Coral	MDRDKEEVHKHAKKERSQYPAIVTEQAWSIKDLLY
Ga0099810_10887305	3300008034	Coral	MDRDKVEVHKHAKKERGQYQAILTEQAWSIKDLLY
Ga0099810_11597941	3300008034	Coral	MGRDEVKVHKHAKEERGRHPAILTEQAWSIKDLLYGIKHH
Ga0099810_13126461	3300008034	Coral	MFMDRDEVEVHKHAKKEPGQHPAILTKQAWSIKDLLQLY
Ga0099810_15640421	3300008034	Coral	MDRDEVEVHKHAKKERGKCPAILTEQAWSIKDLFYGIK
Ga0099808_10005621	3300008035	Coral	MDRDGVEVHKHAKKERGQHPAILAEQAWSIKDLLY
Ga0099808_11212223	3300008035	Coral	MDLDSVSVHRHAKKERDQYPAILAEQAWSIKDLLYGFQGNF
Ga0099808_11432751	3300008035	Coral	MDRDGVEVHKLAKEEQGQYPAILTEQAWSIKDLLYGF
Ga0099808_12833021	3300008035	Coral	MDRDVVEVHKLAKKERGQHQAILTEQAWSIMNLLYGFRGNFS
Ga0099803_11320141	3300008037	Coral	MERDGVEVHKLAKKELGQYPAILIEQAWSINDLLYGFRESFSCG
Ga0099803_12683912	3300008037	Coral	MDGVEVHKHAEKERGRCLVILTEKAWSIKDLLYGFRGNFS
Ga0099803_15241031	3300008037	Coral	MDRDGVRVHKLAKKE*GQYPAILTEQAWSIKDLLYGFQGNFSC
Ga0099805_10020431	3300008038	Coral	MDLDSVSVYEHAKKELGQYPAILAEQAWSIKDLFYGFRGNFSC
Ga0099802_10776461	3300008039	Coral	MKRDGVEVHKLAKKEQGQYQAILTEQAWSIKDLLYG
Ga0099801_10055083	3300008040	Coral	MDRDGVDVHKLAKKERGQYPAILTEQAWSIKDLLYGF
Ga0099801_14631031	3300008040	Coral	MDLDSVSVHRHAKKERDQYPAILAEQAWSIKDLLYG
Ga0099806_10125931	3300008041	Coral	MDLDSVSVYEHAKKELGQYPAILAEQAWSIKDLLYGFRGNFSCG
Ga0099806_10319601	3300008041	Coral	MDQDGVEVHKLAKKERSQYPAILTEQAWSIKDLLYGFRGNFSCG
Ga0099806_10480941	3300008041	Coral	MDQDEVEVHKHAKEKKTKEQGQYRANMTEQMWSIRDLLYGFWGNFPGR
Ga0099806_10554111	3300008041	Coral	MNRDGVEVHKLAKKEQGQHPAILAEQAWSIKDLLYCFRRNF
Ga0099806_11509291	3300008041	Coral	MDRDGVEVHKLAKKERGQYPAILTKQAWSIKDLLYGFR
Ga0099806_11516194	3300008041	Coral	MDRDGVEVHKLAEKERGQHPAILTEQAWSIKDLLYGFRGNFSCGT
Ga0099806_11680631	3300008041	Coral	MDREGVEVHKLAKKERGQYPAILTEQAWSIKDLLYG
Ga0099806_12929003	3300008041	Coral	MDREGVKVHKLAKKERGRYPAILTEQAWSIKDLLYGFR
Ga0099806_13145102	3300008041	Coral	MDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLLYGF
Ga0099806_15518941	3300008041	Coral	MDRDGVKVHKLAKKERGQYPTILTEQAWSIKDLLYGFRGNF
Ga0100406_12014131	3300008042	Coral	MDRDGVEVHKLAKEEQGQYPAILTEQAWSIKDLLYGFQGNFSC
Ga0100406_15754221	3300008042	Coral	MDQDGVKVHKLAKKEQGQNPAILTEQVWSIKDLLYGFR
Ga0100406_16068881	3300008042	Coral	MDRDGVEVHKFAKKERGQYPAILTEQAWSIKDLLY
Ga0100406_16102391	3300008042	Coral	MDLDSVSVHEHAKKELGQYPAILAEQAWSIKDLFYGFR
Ga0099807_10534681	3300008043	Coral	MDGEGVEVHKLAKKERGQYPAILAEQAWSIKDLLYGFRGNFSR
Ga0099807_12684171	3300008043	Coral	MFMDRDGVEVHKLAKKERGQHPAILTEQAWSIKDLLYGFRGNF
Ga0100405_10709072	3300008045	Coral	MDQDEVEVHELAKREPGQYLAILSERAWSIKDLLYGFQGNFF
Ga0099813_10483101	3300008046	Coral	MDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYGIKH
Ga0100404_10188311	3300008047	Coral	MDLDSVSVHEHAKKELGQYPAILAEQAWSIKDLFYGFRG
Ga0100404_12087234	3300008047	Coral	MDRDGVDVHKLAKKERGQYPAILTEQAWSIKDLLYG
Ga0126338_100101484	3300010030	Coral	MDRDGVKVHKHAKKERGQYPAILAEQAWSIKDLLYGFRENFSCGTW
Ga0126338_100169751	3300010030	Coral	MDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLLYG
Ga0126338_100261031	3300010030	Coral	MDRDGVEVHKHAKKERGQYPAILAEQAWSIKDLLYGF
Ga0126338_100356482	3300010030	Coral	MDRDGVKVHKHAKKERGQYPAILAEQAWSIKDLLYGFRENFSCGTWRVV
Ga0126338_100780571	3300010030	Coral	MDRDRVEVHKLAKEEQGQYPAILTEQAWSIKDLLY
Ga0126338_101116981	3300010030	Coral	MDRDRVEVHKLAKKERGQYPAILAEQAWSIKDLLYCFRGNFSRGT
Ga0126338_101255932	3300010030	Coral	MDRDGVEVHKLAKKKERGQYQAILTEQAWSIKDLLYGFRG
Ga0126338_101317222	3300010030	Coral	MDRDGVEVHKHAKKERGQYPAILAEQAWSIKDLLYGFRG
Ga0126338_101827641	3300010030	Coral	MDQDGVKAHKHAKKERGQYPAILTKQACSIKDLLYG
Ga0126338_101921281	3300010030	Coral	MDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYGIKHQ
Ga0126338_102033161	3300010030	Coral	FFLCEFMDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLL*
Ga0126338_102370761	3300010030	Coral	MDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLLYGFQGNFS
Ga0126337_1000063810	3300010031	Coral	MDRDEVEVHKHAKKERGQYPTILTEQAWSIKDLLYGIKH
Ga0126337_100008249	3300010031	Coral	MDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYGIK
Ga0126337_100027991	3300010031	Coral	MDRDKVEVHKHAKKERGQYPAILTEQAWSIKDLLYG
Ga0126337_100031897	3300010031	Coral	VFMDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYG*
Ga0126337_101967043	3300010031	Coral	MDRDEVEVHKHAKKEQGQYPAILTEQAWSIKDLLYGIKHH
Ga0126337_103413672	3300010031	Coral	MDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYGIKHQNTINY
Ga0126337_104006951	3300010031	Coral	MDRDEVEVHKHAKKERGQYPAILTEQAWSIKDLLYGTKHQ
Ga0126337_104508551	3300010031	Coral	MDRDEVEVHKHAKKERGQYPAILTKQAWSIKDLLYG
Ga0126339_100521712	3300010033	Coral	MDRDGVEVHKHAKKERGQYPAILAEQAWSIKDLLYGFRE
Ga0126339_103487921	3300010033	Coral	MDLDSVSVHKQAKKERGQYPAILAEQAWSIKDLLYGFRENFSCGT
Ga0126339_105297291	3300010033	Coral	MDLDSVSVYEHAKKELGQYPAILAEQAWSIKDLLYGFRGNFSCGTRRVV
Ga0126339_106078681	3300010033	Coral	MDRDGVEVHKPAKKERGQYPAILTEQAWSIKDLLYGFQR
Ga0126342_100960211	3300010034	Coral	MDRGGVEVHKHAKRAQGQYPAILTEQAWSIKDLLYGFRGNFS
Ga0126342_101233131	3300010034	Coral	VFIDRDAVEVNKLAIKERGQYPAILTEQTWSIKDLLYGFWDFF
Ga0126342_101788721	3300010034	Coral	MDRDAVEVNKLAKKERGQYPAIWTEQTWSIKDLLQDFWEFLLAGHGG*
Ga0126342_102048341	3300010034	Coral	MDRNCVSVHKLAKEERGQYPAILTEQAWSIKDLLYGF
Ga0126342_102261312	3300010034	Coral	MSRDGVEVHKLTKKERGQYPAILTEQTWSIKDLLYGFW
Ga0126342_103497051	3300010034	Coral	MD*DVVEVHKHAKKERGQYPAILTEQAWSIKDLLYGFL
Ga0126342_103586521	3300010034	Coral	MDRDGVEVHKLAKKERGQYPAILTEQTWSIKDLLY
Ga0126343_100004511	3300010035	Coral	MDRDEVEVHKLAKKERGQYPTILTEQTWSIKDLLY
Ga0126343_100787782	3300010035	Coral	MDRDEVEVHKLAKKERGQYPTILTEQTWSIKDLLYGFPG
Ga0126343_100917361	3300010035	Coral	MDRDEVEVHKLAKKERGQYPAILTEQTWSIKDLLYGFRGN
Ga0126343_101104023	3300010035	Coral	MDRDVVEVHKLAKKERGQYPAILTEQTWSIKDLSY
Ga0126343_101381421	3300010035	Coral	MDQDEVEVHKLAKKEQGQYPTILTEQTWSIKDLLYGF
Ga0126343_101492942	3300010035	Coral	MFMDRDEVEVHKLAKKERGQYPTILTEQTWSIKDLLYGFPG
Ga0126343_102073892	3300010035	Coral	MDRDGVDKVAKKERGQYQAILTEQAWSIKELSYGFRGNFSR
Ga0126343_102364021	3300010035	Coral	MDQDEVEVHKLAKKERGQYPTILTEQTWSIKDLLYGF
Ga0126343_104138201	3300010035	Coral	MDRDVVEVHKLAKKERGQYPAILTEQTWSIKDLLY
Ga0126343_104408151	3300010035	Coral	MDRDEVEVHKLAKIERGQYPTILTEQTWSIKDLLYGFRG
Ga0126343_107163121	3300010035	Coral	DRDEVEVHKLAKKERGQYPTILTEQTWSIKDLLYGFQGNF*
Ga0126343_107495211	3300010035	Coral	MDRDEVEVHKLAKKERGQHPTILTEQTWSIKDLLYG
Ga0126341_10440081	3300010394	Coral	MDRDGVEVHKLAEKERGQYPAILTEQAWPIKDLLH
Ga0126341_10590561	3300010394	Coral	MDRDGVEVHKHAKKERGQYPAILAEQTWSIKDLLYGFQG
Ga0126341_10711801	3300010394	Coral	MDRDGVEVHKLAKKERDQYQAILTEQAWSIKDLLYG
Ga0126341_10809111	3300010394	Coral	MDFDSVLVHKLAKKEQGQYQAILTKQAWSIKDLLYGFRGNFS
Ga0126341_10916571	3300010394	Coral	MDLDSVSVHKHAKKERGQYPAILIEQAWSIKDLLYGFRGN
Ga0126341_11160931	3300010394	Coral	MDRDGVEVHKLAKKERGQYPAILAEQAWSIKDLLYCFRGNFSRGTRRVVPSG
Ga0126341_11310741	3300010394	Coral	DGVEVHKLAKKERGQHPAILAEQAWSIKDLYNNKLE*
Ga0126341_11378361	3300010394	Coral	MDGEGVEVHKLAKKERGQYPAILAEQAWSIKDLLYGFRGNFSC
Ga0126341_11481311	3300010394	Coral	MDRDGVEDHKHAKKERGQYQAILTEQAWSIKDLLYG
Ga0126341_11539911	3300010394	Coral	MFMDRDGVEVHKLAKKERGQYPAILTEQAWSIKDLLWLSGK
Ga0126341_11544191	3300010394	Coral	MDLDSVSVYEHAKKELGQYPAILAEQAWSIKDLLYGFRGNF
Ga0126341_11928311	3300010394	Coral	MDREGVNVHSLSKKKERDQYPAVLTEQAWSIKDLLPGFR
Ga0126341_12002761	3300010394	Coral	MDRDEVEVHKLAKKERGQYPAILTEQAWSIKDLLY
Ga0126341_12058161	3300010394	Coral	EVHKLAKKERGQYKAILTEQAWSIKDLLYGFRENFSCGT*
Ga0126341_12384341	3300010394	Coral	MDRDGVEVHKLAKKERGQYPAILTEQAWAIKDLLCGF
Ga0215185_10794561	3300022597	Coral	MGXDEVEDHKSVKREQGQYPAILTELVWSIKDLFYLINRN
Ga0215180_10544861	3300022598	Coral	LRFYGRDEVEVPKNAKRERGQYLAILTKLAWSIKDLLYGIKSTEKNDL
Ga0255581_10463431	3300027103	Coral	MDXDEVEVHKNAKREQGQYPAILTELAWTIKDLLHGIPRLHVTL
Ga0255580_10530951	3300027264	Coral	MDRDEVEVHKNVKRERGQYPAILTELAWSIKDLLYGIKSTEK