Metagenome Family F100334

Basic Information
Family ID	F100334
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	56 residues
Representative Sequence	MGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALASLAVALGTK
Number of Associated Samples	45
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.25 %
% of genes near scaffold ends (potentially truncated)	17.65 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (53.922 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (59.804 % of family members)
Environment Ontology (ENVO)	Unclassified (64.706 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (65.686 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1Ga0111033_12762343 2Ga0114925_106970292 3Ga0114925_110561122 4Ga0114925_112968362 5Ga0136653_100560634 6Ga0114922_110444691 7Ga0164318_106663322 8Ga0172365_104773932 9Ga0172365_108737672 10Ga0172366_107512062 11Ga0172364_106055762 12Ga0172363_104779852 13Ga0172362_100304426 14Ga0172362_106304792 15Ga0164311_103818352 16Ga0180434_100012885 17Ga0180434_101600533 18Ga0180434_112450301 19Ga0180433_107492212 20Ga0180433_110950572 21Ga0194113_100649834 22Ga0194113_102502353 23Ga0194113_102926313 24Ga0194113_104836231 25Ga0194113_105834252 26Ga0194113_109327032 27Ga0194113_110669312 28Ga0194111_101299243 29Ga0194110_101104583 30Ga0194110_108035001 31Ga0194112_100642364 32Ga0194112_103869922 33Ga0209977_105297722 34Ga0272441_101679925 35Ga0272441_103713432 36Ga0272442_101322262 37Ga0272444_101847552 38Ga0272444_104269652 39Ga0307427_10008584 40Ga0307380_1000081539 41Ga0307380_103297962 42Ga0307380_103848042 43Ga0307380_106456292 44Ga0307379_108710472 45Ga0307376_100562374 46Ga0307375_102453973 47Ga0307375_103865632 48Ga0307377_101449404 49Ga0315291_1000099613 50Ga0315291_1000456820 51Ga0315291_101476532 52Ga0315291_103541002 53Ga0315291_105714963 54Ga0315291_111605701 55Ga0315293_101551885 56Ga0315293_103603671 57Ga0315293_106446332 58Ga0315293_107677222 59Ga0315293_108093332 60Ga0315288_109610471 61Ga0315280_100259283 62Ga0315280_102850243 63Ga0315280_103207771 64Ga0315297_109471042 65Ga0315285_1000021533 66Ga0315285_1000394711 67Ga0315285_100942037 68Ga0315285_105464122 69Ga0315285_106197312 70Ga0315285_107149532 71Ga0315294_100030868 72Ga0315294_101916172 73Ga0315294_103712472 74Ga0315294_106871052 75Ga0315294_110957422 76Ga0315278_101573745 77Ga0315274_1004797511 78Ga0315274_108780763 79Ga0315274_115535772 80Ga0315274_118516872 81Ga0315289_106810362 82Ga0315289_110333412 83Ga0315289_114000612 84Ga0315284_1006860210 85Ga0315284_109078342 86Ga0315284_114384272 87Ga0315282_1002524713 88Ga0315282_102926263 89Ga0315279_108738402 90Ga0315277_101924515 91Ga0315277_105005673 92Ga0315295_115791433 93Ga0315286_102267151 94Ga0315286_106115204 95Ga0315286_115695122 96Ga0315286_122454042 97Ga0315273_101536262 98Ga0315273_101996082 99Ga0315273_105090834 100Ga0315273_117753062 101Ga0334965_0074669_2_139 102Ga0334965_0363477_339_509
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1Ga0111033_12762343 2Ga0114925_106970292 3Ga0114925_110561122 4Ga0114925_112968362 5Ga0136653_100560634 6Ga0180434_100012885 7Ga0180434_101600533 8Ga0209977_105297722 9Ga0307380_1000081539 10Ga0307380_103297962 11Ga0307379_108710472 12Ga0315293_103603671 13Ga0315280_103207771 14Ga0315285_1000394711 15Ga0315274_108780763 16Ga0315274_118516872 17Ga0315284_1006860210 18Ga0315284_109078342 19Ga0334965_0074669_2_139
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56 1Ga0315284_114384272 2Ga0111033_12762343 3Ga0114925_106970292 4Ga0114925_110561122 5Ga0114925_112968362 6Ga0164318_106663322 7Ga0172365_108737672 8Ga0172364_106055762 9Ga0172363_104779852 10Ga0172362_100304426 11Ga0180434_100012885 12Ga0180433_107492212 13Ga0194113_102502353 14Ga0194113_102926313 15Ga0194113_105834252 16Ga0194110_101104583 17Ga0209977_105297722 18Ga0272441_101679925 19Ga0272441_103713432 20Ga0307427_10008584 21Ga0307380_1000081539 22Ga0307380_103297962 23Ga0307380_106456292 24Ga0307379_108710472 25Ga0307375_103865632 26Ga0315291_1000456820 27Ga0315291_101476532 28Ga0315291_105714963 29Ga0315293_106446332 30Ga0315293_108093332 31Ga0315280_102850243 32Ga0315285_1000021533 33Ga0315285_1000394711 34Ga0315285_107149532 35Ga0315294_100030868 36Ga0315294_106871052 37Ga0315274_108780763 38Ga0315274_115535772 39Ga0315284_1006860210 40Ga0315279_108738402 41Ga0315277_105005673 42Ga0334965_0363477_339_509
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.52% β-sheet: 0.00% Coil/Unstructured: 40.48%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09956	DUF2190	7.84
PF07484	Collar	5.88
PF13578	Methyltransf_24	2.94
PF06199	Phage_tail_2	2.94
PF05876	GpA_ATPase	1.96
PF08241	Methyltransf_11	0.98
PF08843	AbiEii	0.98
PF00005	ABC_tran	0.98
PF05930	Phage_AlpA	0.98
PF01391	Collagen	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	1.96
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.98
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.98
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.86 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.92 %
Unclassified	root	N/A	43.14 %
Viruses	superkingdom	All Organisms → Viruses	2.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	29.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.96 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.98 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	4.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	4.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.96 %
Planctopirus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.98 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.96 %
Planctopirus limnophila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus → Planctopirus limnophila	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Unclassified	root	N/A	43.14 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300013127\|Ga0172365_10477393	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	722	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10873767	Not Available	504	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10751206	Not Available	570	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10605576	Not Available	685	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10477985	Not Available	800	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10030442	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus → Planctopirus limnophila	4360	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10630479	Not Available	725	Open in IMG/M
3300008516\|Ga0111033_1276234	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2245	Open in IMG/M
3300009488\|Ga0114925_10697029	Not Available	725	Open in IMG/M
3300009488\|Ga0114925_11056112	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.18%
Terrestrial	Environmental → Terrestrial	8.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	72.55%
Marine	Environmental → Aquatic → Marine	13.73%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.90%
Soil	Environmental → Terrestrial → Soil	8.82%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	8.82%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.96%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	4.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	72.55%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.90%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	59.80%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	4.90%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.90%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	4.90%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.96%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	8.82%

Habitat	Taxonomy	Distribution
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.98%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.76%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	4.90%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	4.90%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.96%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	59.80%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	8.82%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300013103	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay9, Core 4571-4, 0-3 cm	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0111033_12762343	3300008516	Marine Sediment	MGDGQNITDHDLLIRIDERVSKLDRCMTNHLRHHWVVTTAALTALLTALATIVASLVLR*
Ga0114925_106970292	3300009488	Deep Subsurface	MSNNEKPTSDHDLLIRIDERVQKLDRCMTNHLKHHWVVTVAALTAFVGAVVTLVVSWATVKGS*
Ga0114925_110561122	3300009488	Deep Subsurface	MKQMSDHDLLIRIDERVEKLTRCMRNHLRHHWAITLTAFTAMLAAATSIVITLVMGGL*
Ga0114925_112968362	3300009488	Deep Subsurface	MTDGEPMTDHDLLIRIDERVRKLARCMTNHLRHHWIITVAALTALFGAI
Ga0136653_100560634	3300010319	Anoxic Lake Water	MGEPTDHDLLIRIDERVRKLDRCMTNHLAHHWAVTLALVGAVLTALASLAVALGAR*
Ga0114922_110444691	3300011118	Deep Subsurface	YMSDHDLLICIDEWVSKLDRCMNNHLRHHWVVTAAALTALLTALATIVASLVLR*
Ga0164318_106663322	3300013103	Marine Sediment	MSDRGQGITDHDLLIRIDERVQKLDRCMSNHLKHHWVVTAAALTALLTALATIVASLVVR
(restricted) Ga0172365_104773932	3300013127	Sediment	MMGEPTDHDLLIRIDERVDKLDRCMTNHLAHHWAFTLALLAAVLTALASLAVALGTG*
(restricted) Ga0172365_108737672	3300013127	Sediment	MGEPTDHDLLIRIDERVRKLDRCMTNHLAHHWAVTLALVGAVLTALASLAVALGTK*
(restricted) Ga0172366_107512062	3300013128	Sediment	MGEPTDHDLLIRIDERVAKLDRCMTNHMAHHWAVTLALVGAVLTALASLAVALGTK*
(restricted) Ga0172364_106055762	3300013129	Sediment	MMGEPTDHDLLIRIDERVQKLDRSMTNHLAHHWAFTLALLGAVLTALFSLVVALGAK*
(restricted) Ga0172363_104779852	3300013130	Sediment	MDGPTDHDLLIRIDERVAKLDRAMSNHLAHHWAMTLALVGAVLTALASLAVTLGSK*
(restricted) Ga0172362_100304426	3300013133	Sediment	MGEPTDHDLLIRIDERVDKLDRCMTNHLAHHWAFTLALLAAVLTALASLVVALGTG*
(restricted) Ga0172362_106304792	3300013133	Sediment	MGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALVSLAVALGTH*
Ga0164311_103818352	3300014914	Marine Sediment	MNDRGQGITDHDLLIRIDERVQKLDHCMSNHLKQHWVVTAAALTALLTALATIVASLVVR
Ga0180434_100012885	3300017991	Hypersaline Lake Sediment	MADGPMSDHDLLIRIDERVAKLERCMTNHLKHHWAVTLAALSAAVTLAVALVWAL
Ga0180434_101600533	3300017991	Hypersaline Lake Sediment	MMGEPTDHDLLIRIDERVEKLDRCMTNHLRHHWAVTMLALGAVVSAALSLLIQLVR
Ga0180434_112450301	3300017991	Hypersaline Lake Sediment	MSDGENITDHDLLIRIDERVQKLDRCMTNHLRHHWVVTAAALTALLTATATIVAALVLR
Ga0180433_107492212	3300018080	Hypersaline Lake Sediment	MMDGPTDHDLLIRIDERVEKLDRCMTNHLRHHWAVTMLALGAVVSAALSLLIQLVR
Ga0180433_110950572	3300018080	Hypersaline Lake Sediment	MSDGEHITDHDLLIRIDERVQKLDRCMTNHLRHHWVVTAAALTALLTALATIVAALVLR
Ga0194113_100649834	3300020074	Freshwater Lake	VSELSDHDLLIRIDERVRKLDRCMTNHLAHHWTVSVAVLGAVLTALVSLIVALGTQ
Ga0194113_102502353	3300020074	Freshwater Lake	VSGLSDHDLLIRIDERVHKLDRCMTNHLAHHWTVSVAVLGAVLTALASLIVALGTQ
Ga0194113_102926313	3300020074	Freshwater Lake	MSEPSDHDLLIRIDERVRKLDRCMTNHLAHHWAVSMAVLGAVLTALASLIVALGTK
Ga0194113_104836231	3300020074	Freshwater Lake	MNGPSDHDLLIRIDERVEKLDRCMTNHLRHHWAVTMLALGAVASALLSLLIQLVR
Ga0194113_105834252	3300020074	Freshwater Lake	MPEASDHDLLIRIDERVAKLDRCMTNHLAHHWAFTLALLGAVLTALASLAVALGTR
Ga0194113_109327032	3300020074	Freshwater Lake	MPEASDHDLLIRIDERVAKLDRTMTNHLAHHWAFTLALLGAVLTALASLAVALGTR
Ga0194113_110669312	3300020074	Freshwater Lake	VSELSDHDLLIRIDERVHKLDRCMTNHLAHHWSVSVAVLGAVLTALASLIIALGTQ
Ga0194111_101299243	3300020083	Freshwater Lake	MSEPSDHDLLIRIDERVRKLDRCMTNHLSHHWTVSLAVLGSVLAALTSLAVTLGTR
Ga0194110_101104583	3300020084	Freshwater Lake	MSEPSDHDLLIRIDERVRKLDRCMTNHLSHHWTVSLAVLGAVLATLTSLAVTLGTR
Ga0194110_108035001	3300020084	Freshwater Lake	RVMPEASDHDLLIRIDERVAKLDRAMTNHLAHHWAFTLALLGAVLTALASLAVALGTK
Ga0194112_100642364	3300020109	Freshwater Lake	MSEPSDHDLLIRIDERVRKLDRCMTNHLSHHWTVSLAVLGAVLAALTSLAVTLGTR
Ga0194112_103869922	3300020109	Freshwater Lake	MAEASDHDLLIRIDERVAKLDRAMTNHLAHHWAFTLALLGAVLTALASLAVALGTK
Ga0209977_105297722	3300024432	Deep Subsurface	MARQTDNPSDHDLLIRIDERVGKLDRCMTNHLRHHWVVTVAAVTAVFTAAGALAASIVFS
Ga0272441_101679925	3300028920	Marine Sediment	MADGQISDHDLLIRIDERVKKLDRCMTNHLRHHWAVTLAAFSAAVTLAAALAYFL
Ga0272441_103713432	3300028920	Marine Sediment	MSQPSDHDLLIRIDERVRKLDRCMTNHLRHHWAVTMLALGAVVSAILSLVIQLVR
Ga0272442_101322262	3300030616	Marine Sediment	MSDGEHMSDHDLLIRIDERVSKLDRCMTNHLRHHWVVTAAALTALLTALATIVASLVLR
Ga0272444_101847552	3300031111	Marine Sediment	MSDGEHMTDHDLLIRIDERVSKLDRCMSNHLKHHWVVTAAALTALLTALATIVAALVLR
Ga0272444_104269652	3300031111	Marine Sediment	MSQPSDHDLLIRIDERVRKLDRCMTNHLRHHWAVTMLALGAVVSAVLSLIIQLVR
Ga0307427_10008584	3300031351	Salt Marsh	MAEPSDHDLLIRIDERVTKLDRCMTNHLRHHWAVTLLALGAVVSAILSVLIQLAR
Ga0307380_1000081539	3300031539	Soil	MPEPKDHDLLIRIDERVAKLDRCMSNHLSHHWAVTLAALGAMLTAMISIVIAIVAVLGTR
Ga0307380_103297962	3300031539	Soil	MTPPDPSDHDLLIRIDERVTKLDKCLTTHLGQHWAVTLLAFGAIVSAAFSILLRFIG
Ga0307380_103848042	3300031539	Soil	MGEPTDHDLLIRIDERVAKLDRCMAEHLSRHWGVTLALVGAVLTALASLAVALGTN
Ga0307380_106456292	3300031539	Soil	MGEPTDHDLLIRIDERVAKLSRCMAEHLSRHWGVTLALVGAVLTALASLAVALGTN
Ga0307379_108710472	3300031565	Soil	VNGQPLSDHDLLIRIDERQQKLEGCLSNHLKQHWAVTLLAVGAVVSAAFSLLAQVVGR
Ga0307376_100562374	3300031578	Soil	MSEPNDHDLLIRIDERVTKLDRCMTGHLAQHWGVTLAALGAMLTALASIAVALGTK
Ga0307375_102453973	3300031669	Soil	ALMPEPKDHDLLIRIDERVAKLDRCMSNHLSHHWAVTLAALGAMLTAMISIVIAIVAVLGTR
Ga0307375_103865632	3300031669	Soil	LMSEPNDHDLLIRIDERVTKLDRCMTGHLAQHWGVTLAALGAMLTALASIAVALGTK
Ga0307377_101449404	3300031673	Soil	MTPPDPSDHDLLIRIDERVTKLDKCFTTHLGQHWAVTLLAFGAIVSAAFSILLRFIG
Ga0315291_1000099613	3300031707	Sediment	MGEPTDHDLLIRIDERVAKLDRCMSNHLAHHWTVSVAVLGAVLTALASLAVALGTR
Ga0315291_1000456820	3300031707	Sediment	MMADPTDHDLLIRIDERVQKLDRCMANHLAHHWTVSVAVLGAILTALASLAIALGVK
Ga0315291_101476532	3300031707	Sediment	MTELSDHDLLIRIDERVRKLDRCMTNHLAHHWTVSIAVLGAVLTALASLAVALGTR
Ga0315291_103541002	3300031707	Sediment	MRGEPTDHDLLIRIDERVAKLDRCITNHLAHHWAFTLALLGAVLTALASLAIALGTK
Ga0315291_105714963	3300031707	Sediment	MGEPSDHDLLIRIDERVQKIDRAIASHLARHWTVLVAVLGAVLTALASLAVALGTR
Ga0315291_111605701	3300031707	Sediment	MPTDHDLLIRIDERVRKLDRCMTNHLAHHWTVSIAVLGAVLTALASLAVALWAK
Ga0315293_101551885	3300031746	Sediment	LSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVSVLGAVLAALAALVITLGTR
Ga0315293_103603671	3300031746	Sediment	MSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVSVLGAVLAAL
Ga0315293_106446332	3300031746	Sediment	VGEPSDHDLLIRIDERVQKIDRAMANHLAHHWTVSVAVLGAVLAALASLAVALGTR
Ga0315293_107677222	3300031746	Sediment	MTEPNDHDLLIRIDERVRKLDRCMTNHLAHHWTVSIAVLGAVLTALASLAVALGTR
Ga0315293_108093332	3300031746	Sediment	MSDPSDHDLLTRIDERVQKLDRSMTNHLAHHWAVTVALGGALLTALASLVVALGTK
Ga0315288_109610471	3300031772	Sediment	MGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALASLAVAL
Ga0315280_100259283	3300031862	Sediment	MSELTDHDLLIRIDERVHKLDRCMTNHLAHHWTVSVAVLGAVLTALASLVIALGTK
Ga0315280_102850243	3300031862	Sediment	MMSELTDHDLLIRIDERVHKLDRCMTNHLSHHWTVSVAVLGAVLTALASLVIALGTK
Ga0315280_103207771	3300031862	Sediment	DSHGPRRYGDRMMSELTDHDLLIRIDERVHKLDRCMTNHLSHHWTVSVAVLGAVLTALASLIIALGTE
Ga0315297_109471042	3300031873	Sediment	MMGEPSDHDLLIRIDERVQKIDRAIANHLARHWTVSVAVLGAVLTALASLAVALGTR
Ga0315285_1000021533	3300031885	Sediment	MMGEPNDHDLLIRIDERVEKLDRCMTNHLRHHWAVTMTALAAALGAVLSLLVALVK
Ga0315285_1000394711	3300031885	Sediment	MMTTPEVSDHDLLTRIDERVRKLDKCMTNHLAHHWVVSVGALGAIFSAALALIVALLTK
Ga0315285_100942037	3300031885	Sediment	GDGVMGMPTDHDLLIRIDERVRKLDRSMTNHLAHHWTVSIAVLGAVLTALASLAVALGTR
Ga0315285_105464122	3300031885	Sediment	MSEPSDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALASLAVALGTK
Ga0315285_106197312	3300031885	Sediment	VSELSDHDLLIRIDERVHKLDRCMTNHLAHHWTVSVAVLGAVLTALASLIVALGTQ
Ga0315285_107149532	3300031885	Sediment	LSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVAVLGAVLAALASLAVALGTR
Ga0315294_100030868	3300031952	Sediment	MGEPTDHDLLIRIDERVAKLDRCMSNHLAHHWAVTVALVGAVLTALASLAITLGTR
Ga0315294_101916172	3300031952	Sediment	LSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVAALAAALTALASLAVALGTR
Ga0315294_103712472	3300031952	Sediment	LSEPTDHDLLIRIDERVGKLDRVMTNHLAHHGAVSVAVLGAVLAALASLVITLGTR
Ga0315294_106871052	3300031952	Sediment	LSEPTDHDLLIRIDERVAKLDRSMTNHLAHHWAVSVAALGAALTALASLAIALGTR
Ga0315294_110957422	3300031952	Sediment	MSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVAALGAALTALASLAIALGTR
Ga0315278_101573745	3300031997	Sediment	MGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWAVTLALVGAILTALASLAVALGAR
Ga0315274_1004797511	3300031999	Sediment	MGEPTDHDLLIRIDERVAKLDRCITNHLAHHWACTLALLGAVLTALASLAIALGTK
Ga0315274_108780763	3300031999	Sediment	GGNGDVTMSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSLAVLGAVLAAVASLVIALGIR
Ga0315274_115535772	3300031999	Sediment	MRGKPTDHDLLIRIDERVAKLDRCITNHLAHHWAFTLALLGAVLTALASLAIALGTK
Ga0315274_118516872	3300031999	Sediment	LIRIDERVGKLDRCMTNHLAHHWAVSVSVLGAVLAALASLAIALGTR
Ga0315289_106810362	3300032046	Sediment	MTEPNDHDLLIRIDERVRKLDRAMANHLAHHWTVSIAVLGAVLTALASLAVALGTR
Ga0315289_110333412	3300032046	Sediment	MMGEPTDHDLLIRIDERVEKLDRCMMNHLAHHWAVTLALVGAVLTALASLAIALGTK
Ga0315289_114000612	3300032046	Sediment	LSEPTDHDLLIRIDERVGKLDRCMTNHLAHHWAVSVSVLGAVLAALASLVITLGTR
Ga0315284_1006860210	3300032053	Sediment	MADLTDHDLLTRIDERVLKLDRCMTNHLAHHWALTIAVAGAGLAALASLIAALGTK
Ga0315284_109078342	3300032053	Sediment	VGEPSDHDLLIRIDERVQKIDRAIANHLARHWTVSVAVLGAVLTALASLAIALGTK
Ga0315284_114384272	3300032053	Sediment	MGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALASLAVALGTK
Ga0315282_1002524713	3300032069	Sediment	MMSELTDHDLLIRIDERVHKLDRCMTNHLSHHWTVSVAVLGAVLTALASLIIALGTE
Ga0315282_102926263	3300032069	Sediment	VSELSDHDLLIRIDERVHKLDRCMTNHLAHHWSVSVAVLGAVLTALASLIVALGTQ
Ga0315279_108738402	3300032070	Sediment	MMSEISDHDLLIRIDERVHKLDRCMTNHLAHHWTVSVAVLGAVLAAIASLVITLGTK
Ga0315277_101924515	3300032118	Sediment	MMGEPTDHDLLIRIDERVEKLDRCMMNHLAHHWAVTLALVGAVLTALASLAVALGTR
Ga0315277_105005673	3300032118	Sediment	MMGEPSDHDLLIRIDERVQKIDRAIANHLAHHWTASVAVLAAVLTALASLAIALGTR
Ga0315295_115791433	3300032156	Sediment	MTELSDHDLLIRIDERVRKLDRCMTNHLAHHWTVSIAVLGAVLTALASLAV
Ga0315286_102267151	3300032342	Sediment	MGEPSDHDLLIRIDERVQKIDRAMANHLARHWTVSVAVLAAVLTALASLAVALGTR
Ga0315286_106115204	3300032342	Sediment	NDHDLLIRIDERVRKLDRSMTNHLAHHWAFTLALLGAVLTALASLAVALGTR
Ga0315286_115695122	3300032342	Sediment	MRGEPTDHDLLIRIDERVAKLDRCMTNHLAHHWAFTLALLGAVLTALASLAIALGTK
Ga0315286_122454042	3300032342	Sediment	MNEPSDHDLLIRIDERVAKLDRCMTNHLAHHWTVSVAVLGAVLTALASLAVALGTK
Ga0315273_101536262	3300032516	Sediment	MMGEPSDHDLLIRIDERVQKIDRAIANHLAHHWTVSMAVLGAVLTALASLAVALGTR
Ga0315273_101996082	3300032516	Sediment	MPTDHDLLIRIDERVRKLDRCMTNHLAHHWTVSIAVLGAVLTALASLAVALGTR
Ga0315273_105090834	3300032516	Sediment	MMDEPSDHDLLIRIDERVQKIDRAMANHLAHHWTVSVAVLGAVLAALASLAVALGTR
Ga0315273_117753062	3300032516	Sediment	MTEPNDHDLLIRIDERVRKLDRAMANHLAHHWTVSMAVLGAVLTALASLAVALGTR
Ga0334965_0074669_2_139	3300033991	Sediment	IRIDERVQKLDRCMTNHLRHHWAVTMLALGAVLSAALSLLIALVK
Ga0334965_0363477_339_509	3300033991	Sediment	MAEPTDHDLLIRIDERVQKLDRCVANHLAHHWAVTLALVGSVLTALASLAIALGVR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters