Metagenome Family F100279

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100279
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	74 residues
Representative Sequence	AVARRFLQIARFPKATVEKTPDGFHITLRAFPYSRDASSGLRVHALIDTDSSGKILSQELAWDPGPHQLW
Number of Associated Samples	80
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	81.37 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (52.941 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.22% β-sheet: 34.69% Coil/Unstructured: 54.08%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09335	SNARE_assoc	27.45
PF13500	AAA_26	8.82
PF05973	Gp49	2.94
PF03030	H_PPase	2.94
PF13414	TPR_11	1.96
PF12704	MacB_PCD	0.98
PF00561	Abhydrolase_1	0.98
PF13517	FG-GAP_3	0.98
PF00005	ABC_tran	0.98
PF14329	DUF4386	0.98
PF13744	HTH_37	0.98
PF00890	FAD_binding_2	0.98
PF05598	DUF772	0.98
PF08388	GIIM	0.98
PF04307	YdjM	0.98
PF00202	Aminotran_3	0.98
PF01972	SDH_sah	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	27.45
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	27.45
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	27.45
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	2.94
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	2.94
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	2.94
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.55 %
Unclassified	root	N/A	5.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.96 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.96 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.96 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	1.96 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	1.96 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.04 %
Unclassified	root	N/A	5.88 %
Verrucomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp.	1.96 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10014066	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300002908\|JGI25382J43887_10198655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	967	Open in IMG/M
3300002914\|JGI25617J43924_10191534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005171\|Ga0066677_10068742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1815	Open in IMG/M
3300005177\|Ga0066690_10198632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1334	Open in IMG/M
3300005180\|Ga0066685_10022963	All Organisms → cellular organisms → Bacteria	3770	Open in IMG/M
3300005180\|Ga0066685_10623655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300005447\|Ga0066689_10383988	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300006162\|Ga0075030_100046684	All Organisms → cellular organisms → Bacteria	3632	Open in IMG/M
3300009038\|Ga0099829_10018703	All Organisms → cellular organisms → Bacteria	4703	Open in IMG/M
3300009038\|Ga0099829_10082469	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300009038\|Ga0099829_11321779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009088\|Ga0099830_10506923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300009088\|Ga0099830_10740020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300009088\|Ga0099830_11004784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300009089\|Ga0099828_11864945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300009089\|Ga0099828_11881493	Not Available	525	Open in IMG/M
3300009137\|Ga0066709_101910455	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300009137\|Ga0066709_104628625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300009143\|Ga0099792_10835845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300010048\|Ga0126373_12061340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010333\|Ga0134080_10409592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300010336\|Ga0134071_10159003	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300010358\|Ga0126370_11461689	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300010361\|Ga0126378_10657889	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300010376\|Ga0126381_102419407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300010398\|Ga0126383_10343315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1510	Open in IMG/M
3300011269\|Ga0137392_10390896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300011270\|Ga0137391_11097946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp.	643	Open in IMG/M
3300011271\|Ga0137393_10534288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300011444\|Ga0137463_1232488	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300012096\|Ga0137389_10617327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300012096\|Ga0137389_11526572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012189\|Ga0137388_10792999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300012199\|Ga0137383_10947588	Not Available	628	Open in IMG/M
3300012202\|Ga0137363_10944113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300012202\|Ga0137363_11430689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012202\|Ga0137363_11495399	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012203\|Ga0137399_10585588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012203\|Ga0137399_10618453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300012203\|Ga0137399_10625801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300012206\|Ga0137380_10171770	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300012208\|Ga0137376_10158334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1950	Open in IMG/M
3300012209\|Ga0137379_11772857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012210\|Ga0137378_11208745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300012211\|Ga0137377_10104979	All Organisms → cellular organisms → Bacteria → Proteobacteria	2680	Open in IMG/M
3300012349\|Ga0137387_10084112	Not Available	2194	Open in IMG/M
3300012349\|Ga0137387_10223872	Not Available	1353	Open in IMG/M
3300012354\|Ga0137366_10352538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp.	1077	Open in IMG/M
3300012362\|Ga0137361_11452325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300012363\|Ga0137390_10153752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	2286	Open in IMG/M
3300012683\|Ga0137398_10359813	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300012683\|Ga0137398_10419788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300012918\|Ga0137396_10834848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300012925\|Ga0137419_10064069	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300012925\|Ga0137419_10765556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300012929\|Ga0137404_10028777	All Organisms → cellular organisms → Bacteria → Acidobacteria	4090	Open in IMG/M
3300012929\|Ga0137404_10497169	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300012930\|Ga0137407_10031342	All Organisms → cellular organisms → Bacteria → Acidobacteria	4147	Open in IMG/M
3300012930\|Ga0137407_10514687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300012944\|Ga0137410_11387237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300015242\|Ga0137412_10041118	All Organisms → cellular organisms → Bacteria	3774	Open in IMG/M
3300015242\|Ga0137412_10154822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300016404\|Ga0182037_10194022	All Organisms → cellular organisms → Bacteria → Acidobacteria	1570	Open in IMG/M
3300017924\|Ga0187820_1009084	All Organisms → cellular organisms → Bacteria → Acidobacteria	2368	Open in IMG/M
3300017943\|Ga0187819_10409034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300017973\|Ga0187780_10094792	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300018086\|Ga0187769_10033971	All Organisms → cellular organisms → Bacteria	3482	Open in IMG/M
3300018090\|Ga0187770_10253005	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300018090\|Ga0187770_11001505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300018090\|Ga0187770_11251018	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300018482\|Ga0066669_12061558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300019866\|Ga0193756_1033610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300020170\|Ga0179594_10009839	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300020199\|Ga0179592_10097429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300021088\|Ga0210404_10585755	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300021406\|Ga0210386_10687529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300024330\|Ga0137417_1060654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300026296\|Ga0209235_1062567	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300026301\|Ga0209238_1001382	All Organisms → cellular organisms → Bacteria	9415	Open in IMG/M
3300026304\|Ga0209240_1295935	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300026317\|Ga0209154_1054888	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300026326\|Ga0209801_1134937	All Organisms → cellular organisms → Bacteria → Acidobacteria	1051	Open in IMG/M
3300026515\|Ga0257158_1130455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300026547\|Ga0209156_10113270	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300026550\|Ga0209474_10132343	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300026557\|Ga0179587_10629317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300027497\|Ga0208199_1132114	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300027846\|Ga0209180_10340092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300027862\|Ga0209701_10217539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300031564\|Ga0318573_10196728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300031679\|Ga0318561_10154206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300031754\|Ga0307475_10593147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300031754\|Ga0307475_10607826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300031765\|Ga0318554_10226479	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300031910\|Ga0306923_12544746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031912\|Ga0306921_12410912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031954\|Ga0306926_10448633	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300031962\|Ga0307479_10787254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300033158\|Ga0335077_10673748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.10%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.10%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Sediment	Environmental → Aquatic → Sediment	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100140663	3300000597	Forest Soil	PGLDAARNSAVAGRLLEVARFPKATVEQTREGFHVILRAFPYTRDSASGVRVQALIDTDPSGKILHEELDWVPASRDFWWR*
JGI25382J43887_101986551	3300002908	Grasslands Soil	FPKATVEKTADGFRVTLRAFPYSRDADSGWRVEALIVADPTGKILSQELAWNPASREVRLK*
JGI25617J43924_101915341	3300002914	Grasslands Soil	LQVARFPKATVEKTPDGFHIILRAFPYARDASSGWRVEALIKMDPSAKIFSQELVWDPISREVWLK*
Ga0066677_100687424	3300005171	Soil	QVTRFPKATVEKTPDGFHIILRAFPYSRDISSGLRVHALINTDSSGKILSQELAWDPGSLQLQ*
Ga0066690_101986323	3300005177	Soil	VGNSAVARRFLAVACFPKATVEQTPAGFHVILRAFPYTRESGSGLRVQALIDTDRSGKILSEELAWVPASRDFWWR*
Ga0066685_100229631	3300005180	Soil	RFLQAARFPKATVEKTPDGFHITLRAFPYNRDASSGLHVHALIETDPSGKILSQELAWDPGSPQLW*
Ga0066685_106236551	3300005180	Soil	EPSPALDAARDTAVARRFLQVARFPKATVEKTPDGFHIILRAFPYSSDSISGLTVHAIINTDSSGNVLSQELAWDPLSKEY*
Ga0066689_103839882	3300005447	Soil	PALDAARDTAAARRFLQIARFPKATIEKTPTGFHVLLRAFPYSRDASSGLRVYALIDTDPSGKVLSQELTWDPMSREVWLR*
Ga0075030_1000466841	3300006162	Watersheds	ARRFLQVARFPKATVEKTPNGFHVTLRSFPYSRDASSNLRVHAVIDTDSSGKVLSGELAWDILPKQLRRE*
Ga0099829_100187031	3300009038	Vadose Zone Soil	ARFPKASVEKTAQGFHVVLRAFPYGREAMSGPRVHAVIETDASGKVLSQELAWDTISK*
Ga0099829_100824693	3300009038	Vadose Zone Soil	ARRFLQAARFPKATIEKTPEGFHIILRDFPYSRDASSGSRVQALIDTDSSGKILSQELAWDPGKAQFW*
Ga0099829_113217791	3300009038	Vadose Zone Soil	QVARFPKATVEKTPGGFHIVLRAFPYSRDVSSGLRVQAFVDTDSSGKILSQELSWDPGSQ
Ga0099830_105069231	3300009088	Vadose Zone Soil	PALDAARDTAVARRFLQSARFPKATVEKTPSGFQITLRAFPYNRDASSGLRVHALIDTDSSGKILSQELAWDQSSPQFQ*
Ga0099830_107400203	3300009088	Vadose Zone Soil	YKPEPSAAVDAARNTLVARRFLQVARFPKATVEKTPDGFHIILRTFPYSRDAGSGWRLMALIDTDPSGKVLSQELAWDPISREFWWQ*
Ga0099830_110047841	3300009088	Vadose Zone Soil	ARNTAAAHRFLQVARFPKASVEKTPEGYHVILRAFPNTRGAIFGSRVEALIDTDHSGKALSEQFVWDPNSRSLWWE*
Ga0099828_118649451	3300009089	Vadose Zone Soil	RRFLQAARFPKATVEKTPDGFQIILRAFPYSRGVSSGLRVHALIDTDSSGKVLSQELAWDPGSQHFW*
Ga0099828_118814932	3300009089	Vadose Zone Soil	FPKATVEKTPDGFHIILRTLPYSRDASSGLRVIALIDTDPSGKVLSQELAWDPISREFWWQ*
Ga0066709_1019104553	3300009137	Grasslands Soil	ARNSAVARRFLQVARFPKATVEQTPTGFHVILRAFPYRLDYDSWQVQAVIDTDPSGKIVSQELTWVPTLRGWTK*
Ga0066709_1046286251	3300009137	Grasslands Soil	DTAVARRFFQVARFPKATVEKTREGFKVTVRDFPYARDASSGWRVEALIGTDPSGKMRSQELAWDRGSQQPR*
Ga0099792_108358451	3300009143	Vadose Zone Soil	PSRALDAARDTAVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFGSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0126373_120613401	3300010048	Tropical Forest Soil	EPSPGLNATRNSAVARRFLEVARFPKATVEQTREGFHVILRTYPTRDSGSRFQALIDTDPSGKILHEELDWVPASRDFWWR*
Ga0134080_104095921	3300010333	Grasslands Soil	RNSAVAQRFLQVARFPKATVEQTPAGFHVMLRAFPYSRDSSSSVRVQALIDTDPSGKILSEELAWVPGSRGF*
Ga0134071_101590031	3300010336	Grasslands Soil	AATAAARRFLQIARFPKATIEKTPTGFHVLLRAFPYSRDASSGLRVYAVVDTYPSGKVLSQELAWDPMSREVWLR*
Ga0126370_114616892	3300010358	Tropical Forest Soil	LDAARNSDLARRFLQVARFPKATVEQTPTGYHVILRAFPYIRETGSTFLSLSDEGRVQALIDTDPSGKILSEELAWVPSSRAFSWH*
Ga0126378_106578891	3300010361	Tropical Forest Soil	AALDAARNSGVGRRFLQVARFPKATVEQTPTGFHVILRAFFYTREYASPAVKPSGLGVQVLIDTDLSGKILSEELAWIPYSRDFWWK*
Ga0126381_1024194071	3300010376	Tropical Forest Soil	EANSPLTYYKPESSLALDSARNSHVARRFLQIARFPKATVEQTPSGFHVILRAFPYSPESGSGRVTVTDEGRVQALIDTDPSGKILSEELAWVPSPRNFWWH*
Ga0126383_103433151	3300010398	Tropical Forest Soil	VTSYKPEPSPVLNAARSSTVARRFLEVARFPKAAVEQTSGGFRVILRAFPYSRDSSPSLHVQALIDTDPSGKILTEELAWVPTSRAF*
Ga0137392_103908962	3300011269	Vadose Zone Soil	DAARDTAVARRFLQVARFPKATVERIPAGFHITLRAFPYNRHASSGWRVDALIETDPAGRVLSQELAWDPISRDVWLK*
Ga0137391_110979463	3300011270	Vadose Zone Soil	VARRFLQVARFPKATVEKTPGGFHIILRTFPYSRDARSGWRVIALIDTDPTGKILSEELAWDPISRESWLR*
Ga0137393_105342881	3300011271	Vadose Zone Soil	ALDAARDTAVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFGSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0137463_12324881	3300011444	Soil	SSPALETARNSAVARRFLQVARFPKASVEKTPQGFHIILRAFPYTRGASSGWRVEALIDTDAAGKILSQELAWDSSSKESWWR*
Ga0137389_106173272	3300012096	Vadose Zone Soil	FLQAARFPKTTVEKTPEGFHIILRALPYSGSVTSGLRVHPLIETDPSGKILSQELAWDPISMESWWK*
Ga0137389_115265721	3300012096	Vadose Zone Soil	RDTAVARRFLQVARFPKATVEKTPGGFHIVLRAFPYSRDVSSGLRIHAFIDTDSSGKILSQGLSWDPGSQ*
Ga0137388_107929992	3300012189	Vadose Zone Soil	ARFPKATVEKTPDGFHITLRAFPYSRDASSGLRVHALIDTDSSGKILSQELAWDPISREFWWQ*
Ga0137383_109475882	3300012199	Vadose Zone Soil	AARNTPVARRFLQVVRFPKATVEKTPDGFHIILRTFPYSRDASSGLRVIALIDTDPSGKILSQELAWDPISRESWWR*
Ga0137363_109441131	3300012202	Vadose Zone Soil	ESSHALDAARDTPVARRFLQVARFPKATVEKTPSGFQITLRAFPYNRDASSGLRVHALIDTDSSGKILSQELAWDQSSPQFQ*
Ga0137363_114306891	3300012202	Vadose Zone Soil	TAAAGRFLQVARFPKATIEKTSGGFHVVLHAFPYSRDASSGLRVYAVIDTDPSGKVLSEELAWDPVSRQVWLR*
Ga0137363_114953992	3300012202	Vadose Zone Soil	VARRFLQAARFPKATVEKTPQGFQVVLRAFPYGREAMSGPRVHAVIETDASGKVLSQELAWDTISK*
Ga0137399_105855881	3300012203	Vadose Zone Soil	RALDAARDTAVARRFLQAARFPKATVEKTPEGFHITLRAIPYSRDASFGSRVQALIDADSSGKILSQELAWDPISREFWLK*
Ga0137399_106184532	3300012203	Vadose Zone Soil	AARDTAVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFGSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0137399_106258011	3300012203	Vadose Zone Soil	PVAQRFLQAARFPKATVEKTPDGFHITLRAFPYSLAPSSGLRLHALIQTDPSGRILSQELAWDLGNAQFW*
Ga0137380_101717701	3300012206	Vadose Zone Soil	AARFPKATVEKTPDGFHITLRASPYNRDASSGLHVHALIETDPSGKILSQELAWDPGSPQLW*
Ga0137376_101583341	3300012208	Vadose Zone Soil	RFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFSSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0137379_117728571	3300012209	Vadose Zone Soil	YKPEPSAALDAARNTLVARRFLQVARFPKATVEKTPDGFHVILRTFPYSRDASSGLRVIALIDTDPSGKVLSQELAWDLISREFWWQ*
Ga0137378_112087451	3300012210	Vadose Zone Soil	DAAREAAVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASSGSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0137377_101049791	3300012211	Vadose Zone Soil	LQVARFPKATVEKTPDGFRITLRAFPYSRDVASGLRVYAVIDTDSSGKVFSQQLAWDPASRQSWLK*
Ga0137387_100841124	3300012349	Vadose Zone Soil	FLQVARFPKATVEKTPDGFHIILRAFPYSRDVASGLRVYAVIDTDSSGKVFSQQLAWDPASREVWLK*
Ga0137387_102238721	3300012349	Vadose Zone Soil	RALDAARDTAVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFGSRVQALIDADSSGKILSQELAWDPVSREFWLK*
Ga0137366_103525381	3300012354	Vadose Zone Soil	ARNTLVARRFLQVARFPKATVEKTPDGFHIILRTFPYSRDARFGWRVMALIDADPSGKILSQELAWDPISREFWWQ*
Ga0137361_114523251	3300012362	Vadose Zone Soil	AARDTAVARRFLQVARFPKATVEKTPDGFHIILRAFPYNRDFSPGLRVHAVIDTDLSGKILSQELAWDPVSREFWWQ*
Ga0137390_101537521	3300012363	Vadose Zone Soil	FLQVAHFPKATVEKTPDGFHIILRTFPYSRDASSGLRLMALIDADPTGKILSQELAWDPISQESWLR*
Ga0137398_103598133	3300012683	Vadose Zone Soil	ARDTAAARRFLQIARFPKATIEKTPAGFHVLLRAYPYSRDASSGLRVYAVIDTDSYGKVLSEELAWDSSLK*
Ga0137398_104197881	3300012683	Vadose Zone Soil	TAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSTLGVHAEIDTDPTGKVLSQQLAWDPGPHQLW*
Ga0137396_108348481	3300012918	Vadose Zone Soil	NTSVARQFLQAARFPKAGIEKTPDGFHIILRDFPYTRGIRSGLGVEALIDTDPFGKILSQELAWDPISREFWWK*
Ga0137419_100640693	3300012925	Vadose Zone Soil	RFPKATVEKTPDGFHILLRAFPYSGDSRSGSRVEALIIADPTGKILSQELTWDPISREFWWR*
Ga0137419_107655561	3300012925	Vadose Zone Soil	AARFPKATVEKTPEGFHIILRALPYSRDVTSGLRVHALIETDPSGKIVSQELAWDPISMENWWK*
Ga0137404_100287771	3300012929	Vadose Zone Soil	TAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSTLGVHAEIDTDPTGKVLSQELAWDPGPHQLW*
Ga0137404_104971691	3300012929	Vadose Zone Soil	TAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSSLGVHAEIDTDSSGKVLSEELVWDTPLK*
Ga0137407_100313423	3300012930	Vadose Zone Soil	RDTAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDASSGLRVHAEIDTDSSGKVLSQELAWDPGPHQLW*
Ga0137407_105146873	3300012930	Vadose Zone Soil	AIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSSLGVHAEIDTDSSGKVLSEELVWDTPLK*
Ga0137410_104378081	3300012944	Vadose Zone Soil	LDAARSTAVARRFLQAARFPKASVEKTPDGFQNTLRDFPYTRDVRSGLRVQATIDTDPAGKVLSQQLTWNPLSREFWWE*
Ga0137410_113872372	3300012944	Vadose Zone Soil	TVVARRFFQVARFLKATVEKTPDGFHIILRAFPYNRDASSSLRVHAEIETDSSGKILSQELAWDSGSQRPL*
Ga0137412_100411181	3300015242	Vadose Zone Soil	DAARDTAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSSLGVHAEIDTDSSGKVLSEELVWDTPLK*
Ga0137412_101548221	3300015242	Vadose Zone Soil	DAARDTAIARRFLQVARFPKATVEKTPAGFHVTLRAFPYNRDATSTLGVHAEIDTDPTGKVLSQQLAWDPGPHQLW*
Ga0182037_101940221	3300016404	Soil	YKPEPSPGLNATRNSAVARSFLEVARFPKATVEQTREGFHVILRTYPTRDSGSRVQALIDTDPSGKILREELDWVPSSRDFWWR
Ga0187820_10090844	3300017924	Freshwater Sediment	ARKSTVARRFLQVARFPKATVETSPEGFHVILRDFPYAQDASSGCPVEAVMDTDGSGKILSQELEWDPAHREAWWK
Ga0187819_104090342	3300017943	Freshwater Sediment	ARFPKATVENTPQGFHVILRDFPYTRDASSGCPVEAVIDADPSGKILSQELDWDPAHRQFWWK
Ga0187780_100947923	3300017973	Tropical Peatland	LDSARNSAVARRFLQTARFPKASVEKTPDGFHVILRDFPYTKDASSGWHVEALIDTDSSGKILSEELAWTPGSKDSGLR
Ga0187816_102394271	3300017995	Freshwater Sediment	RFLQVARFPKATVETSPEGFHVILRDFPSAQDASSGCPVEAVMDTDGSGKILSQELEWDPAHREAWWK
Ga0187769_100339711	3300018086	Tropical Peatland	QLARFPKASVEKTPEGFHVILRDFPYSRDATSGWRVQALIDADPSGKVLSQEFAWVPMSREFWWR
Ga0187770_102530053	3300018090	Tropical Peatland	DAARDSTVGRRFLQLARFPKASVEKTPEGFHVILRDFPYSRDATSGWRVQALIDADPSGKVLSQEFAWVPMSREFWWR
Ga0187770_110015051	3300018090	Tropical Peatland	AVARRFLQVARFPKASVEKTPDGFHVIIRDFPYTPEAASRRRIQALIDTDPSGKILSEDLAWVPASRAFWWR
Ga0187770_112510182	3300018090	Tropical Peatland	DAARDSTVGRRFLQLARFPKASVEKTPEGFHVILRDFPYSRDATSGWRVQALIDTDPSGKVLSQEFAWVPMSREFWWR
Ga0066669_120615581	3300018482	Grasslands Soil	ARRFLQVARFPKATVEQTPSGFHIILRAFPYTHESGSGLRIEALIDTDPSGKILSEDLAWIPSSRAFSWR
Ga0193756_10336101	3300019866	Soil	DTTVARRFLQAARFPKATVEKTPEGFHITLRAFPYSRDASFGSRVQALIDADSSGKILSQELAWDPVSRELWLK
Ga0179594_100098391	3300020170	Vadose Zone Soil	DATLGTAVARRFLQAARFPKATVEKTPDGFHIILRAFPNSSDANSSLRVHVIIDTDPSAKILSQELAWDSISQQFWFK
Ga0179592_100974291	3300020199	Vadose Zone Soil	LDAARDTTVARRFLQAARFPKATVEKTPEGFHIILRALPYSRGVTSGLRVHALIETDPSGKILSQELVWDPISQQFWLQ
Ga0210404_105857551	3300021088	Soil	QSARFPKASVEKTTEGFHVLLRDFPYTRDATSGPHVQVIIDTDPSGKILSEELAWDPASRQFWWK
Ga0210386_106875291	3300021406	Soil	AVARRFLQVARFPKATVEKTPDGFHITLRAFPDSRDVSSGLRVHAIINTDSSGKVLSQELAWDPGSPQLW
Ga0137417_10606541	3300024330	Vadose Zone Soil	ARRFLQVARFPKATVEKTPGGFHIILRAFPSSRDVGSGSRIHALIDTDSSGKILSQELAWDPISQQFWFK
Ga0209235_10625672	3300026296	Grasslands Soil	MLKCRSAQVPNSLDAARNSALARRFLQVARFPKAAVEQTPRGSHVILRAFPYTRDRVAGLRVQALVDTDPSGKVLSEELTWVPSSRDFWWK
Ga0209238_100138210	3300026301	Grasslands Soil	PSPALDAVRDTAVARRFFQVARFPKATVEKTREGFQVTVRAFPYTRDASSGWRVEALIGTDPSGKMRSQELAWDHGSQPQ
Ga0209240_12959351	3300026304	Grasslands Soil	RFLQVARFPKATVEKTAAGFHITLRAFPYNRDATSSLGVHAEIDTDSSGKVLSEELVWDTPLK
Ga0209154_10548883	3300026317	Soil	AAARRFLQIARFPKATIERTPTGFHVFLRAFPYSRDASSGLRVYALIDTDPSGKVLSQELAWDPMSREVWLR
Ga0209801_11349373	3300026326	Soil	RDTAAARRFLQIARFPKATIEKTPTGFHVLLRAFPYSRDASSGLRVYALIDTDPSGKVLSQELTWDPMSREVWLR
Ga0257158_11304551	3300026515	Soil	RDSAVAHRFLQVARFPKATVEKTPEGFHIILRALPYSRGVTTGLRVHALIETDPSGKVLSQELAWDPISQQFWWQ
Ga0209156_101132703	3300026547	Soil	TAAARRFLQIARFPKATIEKTPTGFHVLLRAFPYSRDASSGLRVYAVIDTDPSGKVLSQELAWDPMSREVWLR
Ga0209474_101323431	3300026550	Soil	RFLQIARFPKATIEKTPTGFHVLLRAFPYSRDASSGLRVYAVIDTYPSGKVLSQELAWDPISREVWLR
Ga0179587_106293171	3300026557	Vadose Zone Soil	PSPALDAARDTAVARRFLQVARFPKATVEKTPDGFHIILRAFPYSRDVSSGLRVHAQIDTDPSGKILSQELAWDPGSSPLW
Ga0208199_11321142	3300027497	Peatlands Soil	SPALDAARDTAVARRFLQVARFPKATVEKTPDGFHVMLRSFPYSRDANSGRRVHVDIYTDPSGKVLSQELAWDTLLK
Ga0209180_103400921	3300027846	Vadose Zone Soil	AVARRFLQIARFPKATVEKTPDGFHITLRAFPYSRDASSGLRVHALIDTDSSGKILSQELAWDPGPHQLW
Ga0209701_102175391	3300027862	Vadose Zone Soil	PALDAARDTAVARRFLQVARFPKATVEKTADGFHIILRAFPYSRDAISGLRVHAEIDTNSSGKVLSEELVWDTLSK
Ga0318573_101967281	3300031564	Soil	AARSSTVAQRFLAVARFPKAAVEQTSGGFHVILRAFPYSRDSGPSLRVQALIDTDPSGKILSEELAWVPSSRAF
Ga0318561_101542062	3300031679	Soil	PSSAVTSYKPGPSPVLNAARSSTVAQRFLDVARFPKAAVEQTSGGFHVILRAFPYSRDSGPSLRVQALIDTDPSGKILSEELAWVPSSRAF
Ga0307475_105931472	3300031754	Hardwood Forest Soil	AARRFLQAARFPKATVEKTPDGFRILLRAFPYSRDASSGFHVQALIQTDPSGKVLSQALAWDPTS
Ga0307475_106078261	3300031754	Hardwood Forest Soil	YKPEPSQSLDAARDTAVARRFLQSARFPKASVEKTPQGFHIILHTFPYPRDATSGRRVEALIDTDPNGKILSQELNWEPGSKGAWW
Ga0318554_102264791	3300031765	Soil	AARSSTVAQRFLDVARFPKAAVEQTSGGFHVILRAFPYSRDSSPSLRVQALIDTDPSGKILSEELAWVPSSRAF
Ga0306923_125447461	3300031910	Soil	KPGPSPVLNAARSSTVAQRFLAVARFPKAAVEQTSGGFHVILRAFPYSRDSSPSLRVQALIDTDPSGKILSEELAWVPSSRAF
Ga0306921_124109121	3300031912	Soil	SSAVTSYKPGPSPVLNAARSSTVAQRFLAVARFPKAAVEQTSGGFHVILRAFPYSRDSSPSLRVQALIDTDPSGKILSEELAWVPSSRAF
Ga0306926_104486334	3300031954	Soil	AITAYKPEPSPGLNATRNSAVARRFLEVARFPKATVEQTREGFHVILRTYPTRDSGSRVQALIDTDPSGKILREELDWVPSSRDFWWR
Ga0307479_107872542	3300031962	Hardwood Forest Soil	ARFPKATVEKTPDGFHILLRAFPYSGDSRSGSRVEAIIIADPTGKILSQELTWDPVSQEVWLR
Ga0335077_106737482	3300033158	Soil	ALDAARNSSLARRFLQVARFPKASVEKTPEGFHIILRDFPYTRSTGSGLPVEALIDTDPSGKILSEELAWDPASRQLWWK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100279

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences