Metagenome Family F100252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100252
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	54 residues
Representative Sequence	ESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Number of Associated Samples	36
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	5.88 %
% of genes from short scaffolds (< 2000 bps)	4.90 %
Associated GOLD sequencing projects	27
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.078 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (79.412 % of family members)
Environment Ontology (ENVO)	Unclassified (79.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.392 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 54.00% Coil/Unstructured: 46.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13245	AAA_19	3.92
PF04851	ResIII	1.96
PF13365	Trypsin_2	1.96
PF00589	Phage_integrase	1.96
PF00535	Glycos_transf_2	0.98
PF13091	PLDc_2	0.98
PF13087	AAA_12	0.98
PF13395	HNH_4	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
All Organisms	root	All Organisms	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
cellular organisms	root	All Organisms → cellular organisms	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.08 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009172\|Ga0114995_10075289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1903	Open in IMG/M
3300009420\|Ga0114994_10372342	Not Available	947	Open in IMG/M
3300009425\|Ga0114997_10195485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1167	Open in IMG/M
3300027687\|Ga0209710_1030964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2636	Open in IMG/M
3300027779\|Ga0209709_10249567	Not Available	788	Open in IMG/M
3300027801\|Ga0209091_10208709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	970	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	84.31%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	15.69%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.41%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	15.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	79.41%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	15.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	79.41%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	8.82%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	6.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.98%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300005931	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011129	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300022851	Saline water microbial communities from Ace Lake, Antarctica - #1237	Environmental	Open in IMG/M
3300022853	Saline water microbial communities from Ace Lake, Antarctica - #371	Environmental	Open in IMG/M
3300023229	Saline water microbial communities from Ace Lake, Antarctica - #551	Environmental	Open in IMG/M
3300023293	Saline water microbial communities from Ace Lake, Antarctica - #1165	Environmental	Open in IMG/M
3300023294	Saline water microbial communities from Ace Lake, Antarctica - #732	Environmental	Open in IMG/M
3300025438	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031676	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_20m	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066837_102324783	3300005593	Marine	SYGDKKLIVVSEETFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKESEFDLKPRLAVITEDE*
Ga0075109_10326371	3300005912	Saline Lake	KQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVITENE*
Ga0075109_10676241	3300005912	Saline Lake	NYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTSKQTRVKNVWNFIDYTSNVVSYKKSEFDLKPRLAVITENE*
Ga0075119_10094262	3300005931	Saline Lake	KLIVVTEEAFESIWIYDPITNEQTRVKNVWNFIDYTSNLVSYKKSELDMDARLAVILEQ*
Ga0075119_10153601	3300005931	Saline Lake	KLIVVTEEAFESIWIYDPITNEQTRVKNVWNFIDYTSNLVSYKKSELDIDARLAVIIKD*
Ga0075119_10418825	3300005931	Saline Lake	PLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0075119_10557001	3300005931	Saline Lake	YSEIKSVYSYGDKKLIVVTEEAFESIWIYDPLTNKQTRVKNVWNFIDYTSSVISYKKSEFDLKPRHAVIIENE*
Ga0075119_10612494	3300005931	Saline Lake	FESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0075119_10807253	3300005931	Saline Lake	FESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDIDERLAVIIKD*
Ga0114995_100727707	3300009172	Marine	ESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114995_100752891	3300009172	Marine	FKLPNQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPKLAVIIEG*
Ga0114995_100927565	3300009172	Marine	ESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKLGLAVITENDNF*
Ga0114995_101036704	3300009172	Marine	IWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0114995_101064231	3300009172	Marine	VKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNI*
Ga0114995_101416751	3300009172	Marine	KQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNF*
Ga0114995_102524311	3300009172	Marine	IWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRFAVITESD*
Ga0114995_102740741	3300009172	Marine	FKLPNQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIVYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114995_107903821	3300009172	Marine	IWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0114994_101545236	3300009420	Marine	NKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNI*
Ga0114994_101625271	3300009420	Marine	IWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKLGLAVITENDNF*
Ga0114994_102398981	3300009420	Marine	KVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114994_102599194	3300009420	Marine	YGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIMENE*
Ga0114994_103723421	3300009420	Marine	NQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114998_100335871	3300009422	Marine	YSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0114998_100837051	3300009422	Marine	DPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKLGLAVITENDNF*
Ga0114998_100840583	3300009422	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0114998_101353755	3300009422	Marine	YSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEG*
Ga0114998_102867021	3300009422	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIMENE*
Ga0114997_100832221	3300009425	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114997_100953021	3300009425	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVIMENE*
Ga0114997_101343291	3300009425	Marine	SIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114997_101954855	3300009425	Marine	VVSEEMFESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEG*
Ga0114997_102007031	3300009425	Marine	DPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0114997_102302944	3300009425	Marine	KNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114997_102326505	3300009425	Marine	DPLINKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEGE*
Ga0114997_104206831	3300009425	Marine	TRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0114997_104803742	3300009425	Marine	QTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIENE*
Ga0115005_117704852	3300009432	Marine	VKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115003_100906867	3300009512	Marine	LTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNI*
Ga0115003_101154801	3300009512	Marine	YSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0115003_101180351	3300009512	Marine	PLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEG*
Ga0115003_103564903	3300009512	Marine	RVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115003_104543221	3300009512	Marine	RNDSPHITKSFYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0115003_104555301	3300009512	Marine	SIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRFAVITESD*
Ga0115004_100307232	3300009526	Marine	TNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0115004_101170204	3300009526	Marine	LIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0115004_102302761	3300009526	Marine	VVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115004_102434811	3300009526	Marine	LTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115006_111420151	3300009544	Marine	FESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKNSEFDLKPRLAVITENE*
Ga0115000_101181136	3300009705	Marine	NKQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVIMENE*
Ga0115000_101549923	3300009705	Marine	FKLPNQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTKKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE*
Ga0115000_101609486	3300009705	Marine	VWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNI*
Ga0115000_102656231	3300009705	Marine	QTRVKNVWNFIDYTSSVVSYKKSEFDLKPKLAVIIEG*
Ga0115000_103449703	3300009705	Marine	SEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115000_103927964	3300009705	Marine	YDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115000_104369932	3300009705	Marine	YGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0115000_104778371	3300009705	Marine	KQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115001_100236042	3300009785	Marine	IYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0115001_101210461	3300009785	Marine	EMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPKLAVIIEG*
Ga0115001_102270664	3300009785	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE*
Ga0115001_102512634	3300009785	Marine	IWIYDPLTNKQTRVKNVWNFIDYTSSVFSYKKSEFDLKPRLAVIMENE*
Ga0133547_104235876	3300010883	Marine	LTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNF*
Ga0133547_114891982	3300010883	Marine	SYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ*
Ga0151672_1664901	3300011129	Marine	SSYFWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNF*
Ga0211682_101209221	3300020376	Marine	KKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITEN
Ga0211682_102465611	3300020376	Marine	IWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0222631_10304371	3300022843	Saline Water	YDPITNEQTRVKNVWNFIDYTSNIVSYKKSELDMDARLAVILEQ
Ga0222691_10429453	3300022851	Saline Water	ESIWIYNPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVITENE
Ga0222652_10304493	3300022853	Saline Water	EIKSVYSYGDKKLIVVSEETFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVITENE
Ga0222661_10303731	3300023229	Saline Water	IVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0222688_10044411	3300023293	Saline Water	TEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0222670_10073831	3300023294	Saline Water	KLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVITENE
Ga0222670_10369724	3300023294	Saline Water	VVSEEMFESIWIYNPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVITENE
Ga0208770_10540221	3300025438	Saline Lake	YGDKKLIVVSEETFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDIDERLAVIIKD
Ga0209710_10309641	3300027687	Marine	NYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEG
Ga0209710_10340121	3300027687	Marine	KQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209192_100376691	3300027752	Marine	DPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209709_100365355	3300027779	Marine	MSVIRKHGKKWQVMIRRNDSPHITKSFYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE
Ga0209709_101380035	3300027779	Marine	EEIFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209709_101507175	3300027779	Marine	PLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209709_102495671	3300027779	Marine	ESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVIIEG
Ga0209709_103265404	3300027779	Marine	TKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNF
Ga0209502_100181982	3300027780	Marine	IYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVILEQ
Ga0209502_100457089	3300027780	Marine	DYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPKLAVIIEG
Ga0209502_101705001	3300027780	Marine	VKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE
Ga0209711_102529561	3300027788	Marine	SEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209711_102896163	3300027788	Marine	TNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209830_101684181	3300027791	Marine	EFKLPNQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209830_103839441	3300027791	Marine	TNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPKLAVIIEG
Ga0209091_102087091	3300027801	Marine	LIVVSEEMFESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209091_104226271	3300027801	Marine	TNKQTRVKNVWNFIDYTSSVISYKKSEFDLKPRHAVITENE
Ga0209090_100274426	3300027813	Marine	HITKSFYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE
Ga0209090_101950184	3300027813	Marine	PNQDYSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209090_102768141	3300027813	Marine	YDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKSRLAVIMENE
Ga0209090_103741701	3300027813	Marine	SIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKLGLAVITENDNF
Ga0209090_103882533	3300027813	Marine	IYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENE
Ga0209090_105060663	3300027813	Marine	PLINKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNI
Ga0209501_104347484	3300027844	Marine	WIYDPLTNKQTRVKNVWNFIDYTFSVVSYKKSEFDLKPRHAVIIEGE
Ga0302126_100881103	3300031622	Marine	KMFESIWIYDPLTKKQTKVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE
Ga0307986_100152419	3300031659	Marine	SEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRHAVIIEGE
Ga0302136_12479313	3300031676	Marine	YSEIKSVYSYGDKKLIVVSEEMFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKKSEFDLKPRLAVITENDNF
Ga0315333_103436013	3300032130	Seawater	ETFESIWIYDPLTNKQTRVKNVWNFIDYTSSVVSYKESEFDLKPRLAAITEDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences