Metagenome / Metatranscriptome Family F100218

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100218
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	98 residues
Representative Sequence	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.22 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	62.75 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.039 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (27.451 % of family members)
Environment Ontology (ENVO)	Unclassified (76.471 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.66% β-sheet: 18.75% Coil/Unstructured: 58.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.193.1.1: Hsp33 domain	d1vq0a1	1vq0	0.56672
d.193.1.1: Hsp33 domain	d1hw7a_	1hw7	0.56101
d.193.1.1: Hsp33 domain	d1vzya1	1vzy	0.55834
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.52883
d.63.1.1: mRNA triphosphatase CET1	d1d8ia_	1d8i	0.51507

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01258	zf-dskA_traR	45.10
PF00295	Glyco_hydro_28	11.76
PF17209	Hfq	6.86
PF02661	Fic	6.86
PF16360	GTP-bdg_M	4.90
PF12969	DUF3857	2.94
PF13004	BACON	1.96
PF13237	Fer4_10	1.96
PF00144	Beta-lactamase	1.96
PF01596	Methyltransf_3	0.98
PF13336	AcetylCoA_hyd_C	0.98
PF01979	Amidohydro_1	0.98
PF04972	BON	0.98
PF08502	LeuA_dimer	0.98
PF04168	Alpha-E	0.98
PF13564	DoxX_2	0.98
PF03746	LamB_YcsF	0.98
PF13167	GTP-bdg_N	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	45.10
COG5434	Polygalacturonase	Carbohydrate transport and metabolism [G]	11.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.96
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.98
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	0.98
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.98
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.98
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	59.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.92 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	34.31 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	3.92 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	34.31 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	3.92 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	34.31 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	3.92 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	34.31 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	3.92 %
Unclassified	root	N/A	1.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009518\|Ga0116128_1114730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	787	Open in IMG/M
3300009519\|Ga0116108_1104536	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300009547\|Ga0116136_1045256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300009623\|Ga0116133_1230644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	504	Open in IMG/M
3300009628\|Ga0116125_1049717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300009630\|Ga0116114_1024531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1798	Open in IMG/M
3300009630\|Ga0116114_1026168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1732	Open in IMG/M
3300009632\|Ga0116102_1065977	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300009637\|Ga0116118_1040169	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300009640\|Ga0116126_1181320	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300009641\|Ga0116120_1082810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1071	Open in IMG/M
3300009643\|Ga0116110_1096247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	1010	Open in IMG/M
3300009644\|Ga0116121_1027533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1803	Open in IMG/M
3300009644\|Ga0116121_1101238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	903	Open in IMG/M
3300009764\|Ga0116134_1070383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1299	Open in IMG/M
3300009839\|Ga0116223_10157025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1409	Open in IMG/M
3300010341\|Ga0074045_10001592	All Organisms → cellular organisms → Bacteria → Acidobacteria	21772	Open in IMG/M
3300010379\|Ga0136449_100002401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	56539	Open in IMG/M
3300010379\|Ga0136449_100446450	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300010379\|Ga0136449_100521027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2056	Open in IMG/M
3300014151\|Ga0181539_1030920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2768	Open in IMG/M
3300014156\|Ga0181518_10014649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5721	Open in IMG/M
3300014156\|Ga0181518_10030350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3507	Open in IMG/M
3300014156\|Ga0181518_10536747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	550	Open in IMG/M
3300014158\|Ga0181521_10010012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9367	Open in IMG/M
3300014158\|Ga0181521_10359720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	728	Open in IMG/M
3300014159\|Ga0181530_10023610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4590	Open in IMG/M
3300014160\|Ga0181517_10001931	All Organisms → cellular organisms → Bacteria → Acidobacteria	22100	Open in IMG/M
3300014160\|Ga0181517_10007492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9091	Open in IMG/M
3300014161\|Ga0181529_10000300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	73584	Open in IMG/M
3300014162\|Ga0181538_10312264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	852	Open in IMG/M
3300014164\|Ga0181532_10271952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	967	Open in IMG/M
3300014164\|Ga0181532_10521649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	650	Open in IMG/M
3300014168\|Ga0181534_10122861	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300014199\|Ga0181535_10009331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9451	Open in IMG/M
3300014199\|Ga0181535_10020899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5250	Open in IMG/M
3300014199\|Ga0181535_10148311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1472	Open in IMG/M
3300014492\|Ga0182013_10054284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3012	Open in IMG/M
3300014494\|Ga0182017_10544879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	709	Open in IMG/M
3300014498\|Ga0182019_10860633	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300014502\|Ga0182021_11037523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	987	Open in IMG/M
3300014839\|Ga0182027_11672570	Not Available	620	Open in IMG/M
3300016700\|Ga0181513_1324500	All Organisms → cellular organisms → Bacteria → Acidobacteria	1648	Open in IMG/M
3300016730\|Ga0181515_1141155	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300016730\|Ga0181515_1169979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	543	Open in IMG/M
3300016750\|Ga0181505_10128479	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300017925\|Ga0187856_1006666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7219	Open in IMG/M
3300017925\|Ga0187856_1098594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1167	Open in IMG/M
3300017929\|Ga0187849_1387557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	512	Open in IMG/M
3300017931\|Ga0187877_1038552	All Organisms → cellular organisms → Bacteria → Acidobacteria	2290	Open in IMG/M
3300017935\|Ga0187848_10119455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	1183	Open in IMG/M
3300017938\|Ga0187854_10066017	Not Available	1762	Open in IMG/M
3300017938\|Ga0187854_10351207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	623	Open in IMG/M
3300017940\|Ga0187853_10036440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2592	Open in IMG/M
3300017940\|Ga0187853_10149616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1118	Open in IMG/M
3300017941\|Ga0187850_10149194	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300017946\|Ga0187879_10000662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	22971	Open in IMG/M
3300017948\|Ga0187847_10010322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6184	Open in IMG/M
3300017988\|Ga0181520_10003707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	26511	Open in IMG/M
3300017988\|Ga0181520_10076208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2994	Open in IMG/M
3300017988\|Ga0181520_10264644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1306	Open in IMG/M
3300018003\|Ga0187876_1023682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2849	Open in IMG/M
3300018008\|Ga0187888_1011236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5252	Open in IMG/M
3300018008\|Ga0187888_1214049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	760	Open in IMG/M
3300018008\|Ga0187888_1248020	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300018013\|Ga0187873_1100881	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300018030\|Ga0187869_10051632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2169	Open in IMG/M
3300018034\|Ga0187863_10756071	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300018037\|Ga0187883_10099637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M
3300018040\|Ga0187862_10077537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2346	Open in IMG/M
3300018042\|Ga0187871_10447917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	714	Open in IMG/M
3300018043\|Ga0187887_10197420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1197	Open in IMG/M
3300018057\|Ga0187858_10499564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	744	Open in IMG/M
3300018060\|Ga0187765_10305867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	955	Open in IMG/M
3300018085\|Ga0187772_10193650	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300019278\|Ga0187800_1066373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	674	Open in IMG/M
3300019788\|Ga0182028_1281106	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300023091\|Ga0224559_1086106	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300025473\|Ga0208190_1012612	All Organisms → cellular organisms → Bacteria → Acidobacteria	2091	Open in IMG/M
3300025480\|Ga0208688_1083284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	634	Open in IMG/M
3300027854\|Ga0209517_10673249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	536	Open in IMG/M
3300027905\|Ga0209415_10002966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	31747	Open in IMG/M
3300028779\|Ga0302266_10128603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1007	Open in IMG/M
3300028873\|Ga0302197_10317801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	699	Open in IMG/M
3300029916\|Ga0302148_1176117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	604	Open in IMG/M
3300029920\|Ga0302142_1082215	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300031249\|Ga0265339_10598743	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031344\|Ga0265316_10060756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2937	Open in IMG/M
3300032160\|Ga0311301_10166944	All Organisms → cellular organisms → Bacteria	3906	Open in IMG/M
3300032160\|Ga0311301_10359724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2267	Open in IMG/M
3300032160\|Ga0311301_10680290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1454	Open in IMG/M
3300032783\|Ga0335079_10090847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3466	Open in IMG/M
3300032783\|Ga0335079_10309907	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300032805\|Ga0335078_10071049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5086	Open in IMG/M
3300032805\|Ga0335078_10303579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2145	Open in IMG/M
3300032805\|Ga0335078_10319777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2076	Open in IMG/M
3300032805\|Ga0335078_10601613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300032828\|Ga0335080_10140333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2678	Open in IMG/M
3300033402\|Ga0326728_10076720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4351	Open in IMG/M
3300033405\|Ga0326727_10503611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1052	Open in IMG/M
3300033405\|Ga0326727_10591549	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300033977\|Ga0314861_0035138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2935	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	63.73%
Terrestrial	Environmental → Terrestrial	34.31%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.73%
Soil	Environmental → Terrestrial → Soil	26.47%
Peat	Environmental → Terrestrial → Peat	7.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	63.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	47.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	27.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	19.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	16.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.90%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.94%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116128_11147302	3300009518	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDD*
Ga0116108_11045362	3300009519	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE*
Ga0116136_10452562	3300009547	Peatland	MKLADLRKLSIKQKTRIRFTVAGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFEPAAEQDRKHPEPTRSLTRDEVARLLGPASATAAADHEDE*
Ga0116133_12306442	3300009623	Peatland	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARL
Ga0116125_10497171	3300009628	Peatland	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATA
Ga0116114_10245313	3300009630	Peatland	MKLADLRKLSIKQETRIHFAVTGGLECVITEHGIAQVPGLRGAPQFNLESELAAAREFRFEPAGEPDRKHPAPTRLLTRDEVACLLGPATATAAAEHEDE*
Ga0116114_10261683	3300009630	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASAT
Ga0116102_10659771	3300009632	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARL
Ga0116118_10401693	3300009637	Peatland	MKLADLRKLSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0116126_11813201	3300009640	Peatland	MKLADLRKLSIKQKTRIHFALAGGLEGVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAADHEDE*
Ga0116120_10828102	3300009641	Peatland	MKLADLRKLSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPTRLLTRDEVACLLGPATATAAAEHEDE*
Ga0116110_10962472	3300009643	Peatland	KLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0116121_10275333	3300009644	Peatland	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE*
Ga0116121_11012382	3300009644	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAAHEDE*
Ga0116134_10703834	3300009764	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE*
Ga0116223_101570251	3300009839	Peatlands Soil	MKLGDLRKLSIKQKTRIRFAVTGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFELAGELDRKHAAPPRTLTRDQVAGMLGPASATAAAEHEDE*
Ga0074045_1000159220	3300010341	Bog Forest Soil	MKLADLRKLSIKQETRICFAVAGGLECVVTERGIAQVPGLRGTPDFDLERELAAAREFRFELAHQPDRKHTAPARVHTRDEVARLLGPASATAASANEHEDE*
Ga0136449_10000240129	3300010379	Peatlands Soil	MKLADLRKLSIKQKTRILFPVAGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFELAGELDRKHAAPPRTLTRDQVAGMLGPASATAAAEHEDE*
Ga0136449_1004464502	3300010379	Peatlands Soil	MTLADLRKLSIKRETRIRFAVTGGLECVITERGIAHVPGLRGVPEFNLESELGAAREFFFEPAQQTDRKHAAASRALTRAEVAQLLGPASATAAEHEDE*
Ga0136449_1005210272	3300010379	Peatlands Soil	MKLADLRKLSIKQKTRIRFALAGGLECVITEHGIAQVPGLRGAPEFNLESELATAHEFRFEPAGEADRKNPAPTRSFTRDEVARLLGPASATAGAAAEHEDE*
Ga0181539_10309203	3300014151	Bog	MKLADLRKLSIKQKTRISFALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASATAASAAEHEDD*
Ga0181518_100146494	3300014156	Bog	MHLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGVPKFNLESELASAREFRFEPAGEPDRKHPAPTRSLTRDEVARLLSPASAAASAAEHEDE*
Ga0181518_100303503	3300014156	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0181518_105367472	3300014156	Bog	ALAGGLECVINEHGIAQVPGLRGVPKFNLESELATAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASAAAAAAEHEDE*
Ga0181521_100100123	3300014158	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELATAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASAAAAAAEHEDE*
Ga0181521_103597201	3300014158	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGVPKFNLESELASAREFRFEPAGEPDRKHPAPTRSLTRDEVARLLSPASAAASAAEHEDE*
Ga0181530_100236103	3300014159	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELATAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASATAAAAEHEDE*
Ga0181517_1000193115	3300014160	Bog	MKLADLRKLSIQQKARICFALAGGLECVITEHGIAQVPGLRGAPQFNLESGLAAAREFRFEPAGEPDRKHPAPTRSLTREEVARLLGPASATAAAAAEREDE*
Ga0181517_100074923	3300014160	Bog	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAHVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE*
Ga0181529_1000030045	3300014161	Bog	MKLADLRKLSIKQEMRIHFAVVGGLECVITERGIAQVPGLHGAPAFDLERELDRAREFRFEPARQPDRKHTAPVRVHTRDEVVRLLAPASATTAAEHEDE*
Ga0181538_103122642	3300014162	Bog	MKLADLRKLSIKQKTRIHFTLAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0181532_102719522	3300014164	Bog	MKLADLRKLSIKQKTRICFALAGGLECVITEHGIAQVPGLRGAPTFDLEAELSAAREFRFEPAGELDRKHPAPIRSVTRDEVARLLGPASATASAGAEHEDE*
Ga0181532_105216492	3300014164	Bog	LSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0181534_101228612	3300014168	Bog	MKLADLRKLAVEQETRIRFAIAGGLECIVTERGIAEVPGLQGTPKFNLETELASAREFHFEPARHPGRKGPVPTRLLTRDEVARLLAPAPAAAASATEHEDE*
Ga0181535_100093317	3300014199	Bog	MKLADLRKLSIKQKTRIHFGVTGGLECVITEHGLAQVPGLRGAPAFNLDSELAAAHEFRFEPAGEPDRKHPAPIRTLTRDEVTRLLGPASATAAAEHDDD*
Ga0181535_100208992	3300014199	Bog	MKLADLRKLSIQQKARICFALAGGLECVITEHGIAQVPGLRGAPQFNLESGLAAAREFRFEPAGEPDRKHPAPTRSLTREEVARLLGPASATAAAEHEDD*
Ga0181535_101483112	3300014199	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG*
Ga0182013_100542842	3300014492	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVGRLLGPASATAAAEHEDD*
Ga0182017_105448792	3300014494	Fen	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPQFNLESELAAVREFRLEPAAQPDRKHPAPTRSLTRDEVARLLGPASATAASAAEHEDE*
Ga0182019_108606332	3300014498	Fen	MKLADLRKLATKQETRIRFAVAGGLECVVTERGIAEVPGLQGTPKFNLETELASAREFHFEPARHPGRKGPVPTRLLTRDEVARLLAPAPAATTE
Ga0182021_110375232	3300014502	Fen	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPQFNLESELAAVREFRLEPAVQPDRKHPAPTRSLTRDEVARLLGPASATAASAAEHEDE*
Ga0182027_116725702	3300014839	Fen	MKLADLRKLATKQETRIRFAVAGGLECVVTERGIAEVPGLRGTPKFNLETELASAREFHFEPARHPGRKGPVPTRLLTRDEVARLLAPAPAATTEHDDE*
Ga0181513_13245001	3300016700	Peatland	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAHVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE
Ga0181515_11411553	3300016730	Peatland	MKLADLRKLSIKQKTRISFALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASATAASAAEHEDD
Ga0181515_11699792	3300016730	Peatland	MHLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASAAAAAAEHEDE
Ga0181505_101284792	3300016750	Peatland	MKLADLRKLSIKQEMRIHFAVVGGLECVITERGIAQVPGLHGAPAFDLERELDRAREFRFEPARQPDRKHTAPVRVHTRDEVVRLLAPASATTAAEHEDE
Ga0187856_10066665	3300017925	Peatland	MKLADLRKLSIKQKTRIRFTVAGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFEPAAEQDRKHPEPTRSLTRDEVARLLGPASATAAADHEDE
Ga0187856_10985942	3300017925	Peatland	MKLADLRKLSIKQKTRISFALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASAAASAAEHEDD
Ga0187849_13875572	3300017929	Peatland	MKLADLRKLSIKQKTRIRFTVAGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFEPAAEQDRKHPEPTRSLTRDEVARLLGPASA
Ga0187877_10385522	3300017931	Peatland	MKLADLRKLSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG
Ga0187848_101194552	3300017935	Peatland	RIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE
Ga0187854_100660174	3300017938	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDD
Ga0187854_103512071	3300017938	Peatland	MKLADLRKLSIKQETRIHFAVTGGLECVITEHGIAQVPGLRGAPQFNLESELAAAREFRFEPAGEPDRKHPAPTRLLTRDEVACLLGPA
Ga0187853_100364403	3300017940	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEEG
Ga0187853_101496162	3300017940	Peatland	MKLADLRKLSIKQETRIHFAVTGGLECVITEHGIAQVPGLRGAPQFNLESELAAAREFRFEPAGEPDRKHPAPTRLLTRDEVACLLGPATATAAAEHEDE
Ga0187850_101491942	3300017941	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE
Ga0187879_100006624	3300017946	Peatland	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE
Ga0187847_100103222	3300017948	Peatland	MKLADLRKLSIKQKTRIHFGVTGGLECVITEHGLAQVPGLRGAPAFNLDSELAAAHEFRFEPAGEPDRKHPAPIRTLTRDEVTRLLGPASATAAAEHDDD
Ga0181520_1000370728	3300017988	Bog	MKLADLRKLSIQQKARICFALAGGLECVITEHGIAQVPGLRGAPQFNLESGLAAAREFRFEPAGEPDRKHPAPTRSLTREEVARLLGPASATAAAAAEREDE
Ga0181520_100762083	3300017988	Bog	MHLADLRKLSIKQNTRIHFALAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGAPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE
Ga0181520_102646444	3300017988	Bog	ADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDD
Ga0187876_10236823	3300018003	Peatland	MKLADLRKLSIKQKTRISSALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASAAASAAEHEDD
Ga0187888_101123610	3300018008	Peatland	RKLSIKQKTRISFALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASAAASAAEHEDD
Ga0187888_12140492	3300018008	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAVAEHEDD
Ga0187888_12480202	3300018008	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRD
Ga0187873_11008813	3300018013	Peatland	MKLADLRKLSIKQKTRISFALGGGLECVITEHGIAQVPGLRGAPQFNLESELATAREFRLEPAGEPDRKHPAPTRSLTRDELARLLGPASATAAAEHEDD
Ga0187869_100516321	3300018030	Peatland	MKLADLRKLSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPAS
Ga0187863_107560711	3300018034	Peatland	KTRIHFGVTGGLECVITEHGLAQVPGLRGAPAFNLDSELAAAHEFRFEPAGEPDRKHPAPIRTLTRDEVTRLLGPASATAAAEHDDD
Ga0187883_100996371	3300018037	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPA
Ga0187862_100775373	3300018040	Peatland	MKLADLRKLSIKQKTRIHFTLAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASAT
Ga0187871_104479172	3300018042	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPSSATAAAAEHEDE
Ga0187887_101974202	3300018043	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASATAAAAEHEDE
Ga0187858_104995642	3300018057	Peatland	RLNPRVGELPPIRVPNAAGGLECVVTEHGIAQVPGLRGVPKFNLESELAAVREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATASAAQHEDE
Ga0187765_103058672	3300018060	Tropical Peatland	MKLADLRKLSIKEKSRIRFSICDGLECVITEHGVAQVPGLRGIPGLNLETELASAREFRIEPVAVAGRKQTPAPRSLTRPEVEKLLGPATATAAAEHEDE
Ga0187772_101936503	3300018085	Tropical Peatland	MKLADLRKLSIKQNTRICFALAGGLECVITEHGVAQVPGLRAVPAFNLENELASAREFRFEPVGVTDRKHPAASRSLTREEVARLLGPSSATAAAEHEDE
Ga0187800_10663732	3300019278	Peatland	MKLADLRRLSIKQKVRIRFDLSEGLECVISEHGIAQVPGLRGIPKFNLEDELAAAREFRVEPAGEPDRKHTPAVRSLSRDEVALLAN
Ga0182028_12811062	3300019788	Fen	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVGRLLGPASATAAAEHEDD
Ga0224559_10861062	3300023091	Soil	MKLADLRKLATKQETRIRFAVAGGLECVVTERGIAEVPGLRGTPKFNLETELASAREFHFEPARHPGRKGPVPTRLLTRDEVARLLAPAPAATTEHDDE
Ga0208190_10126123	3300025473	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVTGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDD
Ga0208688_10832842	3300025480	Peatland	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPIRSLTRDEVAR
Ga0209517_106732491	3300027854	Peatlands Soil	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGVPKFNLESELAAAREFRFEPAGEPDRKHPAPTRSLTRDEVARLLSPASAIADAAEREDE
Ga0209415_1000296630	3300027905	Peatlands Soil	MKLADLRKLSIKQKTRILFPVAGGLECVITEHGIAQVPGLRGAPAFNLESELAAAREFRFELAGELDRKHAAPPRTLTRDQVAGMLGPASATAAAEHEDE
Ga0302266_101286033	3300028779	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASA
Ga0302197_103178012	3300028873	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAA
Ga0302148_11761172	3300029916	Bog	IHFALAGGLECVITEHGIAQVPGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE
Ga0302142_10822152	3300029920	Bog	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVSGLRGAPEFNLESDLAAAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLGPASATAAAEHEDE
Ga0265339_105987432	3300031249	Rhizosphere	MKLAELRKFSIKQKTRIHFALAGGLECVITEHGLAQIPGLHGAPQFDLESELAAAREFRFEPAVQSDRKHPAPIRTLTREEVARLLGPASATAASAEHEDE
Ga0265316_100607563	3300031344	Rhizosphere	MKLADLRKLSIKQKTRIHFALAGGLECVITEHGIAQVPGLRGAPQFNLESELAAVREFRLEPAAQPDRKHPAPTRSLTRDEVARLLGPASATAASAAEHEDE
Ga0311301_101669442	3300032160	Peatlands Soil	MKLGDLRKLSIKQKTRIRFAVTGGLECVITEHGIAQVPGLRGAPAFNLESELATAREFRFEPAGELDRKHPAPARSLTRDEVARLLGPATATAAAEHEDE
Ga0311301_103597244	3300032160	Peatlands Soil	MTLADLRKLSIKRETRIRFAVTGGLECVITERGIAHVPGLRGVPEFNLESELGAAREFFFEPAQQTDRKHAAASRALTRAEVAQLLGPASATAAEHEDE
Ga0311301_106802903	3300032160	Peatlands Soil	MKLADLRKLSIKQKTRIRFALAGGLECVITEHGIAQVPGLRGAPEFNLESELATAHEFRFEPAGEADRKNPAPTRSFTRDEVARLLGPASATAGAAAEHEDE
Ga0335079_100908475	3300032783	Soil	MKLADLRKLSVKQRTRIHFAVTGGLECVITEHGVAQVPGLNKPPTFNLETELAAAREFRFEPAGSADRKSPSTARSLTRDEVAGLLGPTSAAAPVEHEDE
Ga0335079_103099073	3300032783	Soil	MKLADLRRLSVKQKTRICFALPDGLECVVTEHGLAQVPGLRGIPKFNLENELAAAREFRFEPAAEPDHKRPLASRTLSRDEVALLVDPASAVSAAEHDDE
Ga0335078_100710493	3300032805	Soil	MKLADLRKLSIKQNARISFVLAGGLECVITEHGLAQVPGLHAVPTFNLENELASAREFRFEPAGVTDRKHPAASRSLTREEVARLLGPPSATAAAEHEDE
Ga0335078_103035792	3300032805	Soil	MKLADVRKLAIKQRSRIHFAIAGGLECVVTEHGIAQVPGLREVPRFNLETELAASREFRLEPVAVQERNRPSQARTLTRQEVEAMLGPVTAAASAAEHEEE
Ga0335078_103197773	3300032805	Soil	MKLADLRRLSVKQKTRICFALPDGLECVVTEHGLAQVPGLRGIPKFNLENELAAAREFRFEPAAEPDHKRPSASRTLSRDEVALLVDPASAVSAAEHDDE
Ga0335078_106016133	3300032805	Soil	MKLADLRRLSIKQQTRIRFALPDGLECVITERGIAQVPGLRGIPKFNLETELAAAREFRLEPAGEPDRKHPTASRTLSRDEVALLLDPGSAAAAAEHEDE
Ga0335080_101403333	3300032828	Soil	MKLADVRKLAIKQRSRIHFAIAGGLECVVTEHGIAQVPGLREVPRFNLETELAASREFRLEPVAVQERNRPSQVRTLTRQEVEAMLGPVTAAASAAEHEEE
Ga0326728_100767203	3300033402	Peat Soil	MKLADLRKLSIKQKTRIHFALPGGLECVITEHGIAQVPGLRGVPKFNLESELATAREFRFEPAGEPDRKHAAPIRSLTRDEVARLLSPASAAAAAAEHEDE
Ga0326727_105036112	3300033405	Peat Soil	MKLADLRKLSIKQKTRIHFALAGGLECVINEHGIAQVPGLRGVPKFNLESELATAREFRFEPAGEPDRKHPAPIRSLTRDEVARLLSPASAAAAAAEHEDE
Ga0326727_105915492	3300033405	Peat Soil	MKLADLRKLAVKQETRIRFAIAGGLECIVTERGIAEVPGLQGTPKFNLETELASAREFHFEPARHPGRKGPVPTRLLTRDEVARLLAPAPAAAASATEHEDE
Ga0314861_0035138_2297_2599	3300033977	Peatland	MKLADLRRLSIKQKTRICFPLPDGLECVITEHGIAQVPGLRAIPRFNLENELAAAREFRLEPAGELARKHPRPPRSLSRDEVALLLDRPSATPLADREDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100218

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences