Metagenome / Metatranscriptome Family F100199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100199
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	103 residues
Representative Sequence	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAETVPIRRAACF
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.00 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	61.76 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.980 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (84.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.804 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.12% β-sheet: 0.00% Coil/Unstructured: 30.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01979	Amidohydro_1	31.37
PF00591	Glycos_transf_3	7.84
PF01433	Peptidase_M1	4.90
PF02449	Glyco_hydro_42	3.92
PF08442	ATP-grasp_2	2.94
PF04961	FTCD_C	2.94
PF01175	Urocanase	2.94
PF12327	FtsZ_C	1.96
PF07837	FTCD_N	1.96
PF03793	PASTA	0.98
PF01915	Glyco_hydro_3_C	0.98
PF09243	Rsm22	0.98
PF08734	GYD	0.98
PF02629	CoA_binding	0.98
PF02700	PurS	0.98
PF00677	Lum_binding	0.98
PF00356	LacI	0.98
PF02771	Acyl-CoA_dh_N	0.98
PF02885	Glycos_trans_3N	0.98
PF05598	DUF772	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	5.88
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	4.90
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	3.92
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	2.94
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	2.94
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	2.94
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	2.94
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	2.94
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	2.94
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	1.96
COG0307	Riboflavin synthase alpha chain	Coenzyme transport and metabolism [H]	0.98
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.98
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.98
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.98
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.98
COG5459	Ribosomal protein RSM22 (predicted mitochondrial rRNA methylase)	Translation, ribosomal structure and biogenesis [J]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
All Organisms	root	All Organisms	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
cellular organisms	root	All Organisms → cellular organisms	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.57 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	17.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	16.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	16.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	14.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10034774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3270	Open in IMG/M
3300009547\|Ga0116136_1008926	All Organisms → cellular organisms → Bacteria → Acidobacteria	3800	Open in IMG/M
3300009623\|Ga0116133_1056568	Not Available	974	Open in IMG/M
3300009629\|Ga0116119_1111070	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009630\|Ga0116114_1057418	Not Available	1086	Open in IMG/M
3300009632\|Ga0116102_1006975	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4248	Open in IMG/M
3300009632\|Ga0116102_1018336	All Organisms → cellular organisms → Bacteria → Acidobacteria	2450	Open in IMG/M
3300009636\|Ga0116112_1149967	Not Available	650	Open in IMG/M
3300009637\|Ga0116118_1039680	All Organisms → cellular organisms → Bacteria → Acidobacteria	1703	Open in IMG/M
3300009639\|Ga0116122_1147470	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300009639\|Ga0116122_1154477	Not Available	729	Open in IMG/M
3300009641\|Ga0116120_1187844	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300009764\|Ga0116134_1063514	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300009824\|Ga0116219_10136214	Not Available	1424	Open in IMG/M
3300009839\|Ga0116223_10567641	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010341\|Ga0074045_10002261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17903	Open in IMG/M
3300010379\|Ga0136449_100159174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4404	Open in IMG/M
3300010379\|Ga0136449_100187607	All Organisms → cellular organisms → Bacteria → Acidobacteria	3962	Open in IMG/M
3300010379\|Ga0136449_101685247	Not Available	957	Open in IMG/M
3300014151\|Ga0181539_1357005	Not Available	527	Open in IMG/M
3300014153\|Ga0181527_1040014	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300014156\|Ga0181518_10013720	All Organisms → cellular organisms → Bacteria → Acidobacteria	5993	Open in IMG/M
3300014160\|Ga0181517_10063863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2221	Open in IMG/M
3300014161\|Ga0181529_10000673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	48610	Open in IMG/M
3300014162\|Ga0181538_10198893	Not Available	1126	Open in IMG/M
3300014164\|Ga0181532_10026642	All Organisms → cellular organisms → Bacteria → Acidobacteria	4081	Open in IMG/M
3300014199\|Ga0181535_10013612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7192	Open in IMG/M
3300014199\|Ga0181535_10187054	Not Available	1278	Open in IMG/M
3300014492\|Ga0182013_10022972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5537	Open in IMG/M
3300014496\|Ga0182011_10970097	Not Available	527	Open in IMG/M
3300014498\|Ga0182019_11108342	Not Available	578	Open in IMG/M
3300014657\|Ga0181522_10206481	Not Available	1156	Open in IMG/M
3300014658\|Ga0181519_10689963	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300014839\|Ga0182027_10430147	Not Available	1459	Open in IMG/M
3300016702\|Ga0181511_1158513	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300016705\|Ga0181507_1092451	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300017925\|Ga0187856_1005172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8453	Open in IMG/M
3300017929\|Ga0187849_1157638	Not Available	911	Open in IMG/M
3300017929\|Ga0187849_1277115	Not Available	632	Open in IMG/M
3300017931\|Ga0187877_1110741	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300017935\|Ga0187848_10239840	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300017938\|Ga0187854_10244328	Not Available	780	Open in IMG/M
3300017940\|Ga0187853_10036919	All Organisms → cellular organisms → Bacteria → Acidobacteria	2570	Open in IMG/M
3300017941\|Ga0187850_10259706	Not Available	779	Open in IMG/M
3300017941\|Ga0187850_10380470	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300017946\|Ga0187879_10042750	Not Available	2695	Open in IMG/M
3300017948\|Ga0187847_10036610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2880	Open in IMG/M
3300017948\|Ga0187847_10236316	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300017988\|Ga0181520_10044684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4319	Open in IMG/M
3300017988\|Ga0181520_10870939	Not Available	603	Open in IMG/M
3300017988\|Ga0181520_11072518	Not Available	530	Open in IMG/M
3300018002\|Ga0187868_1050336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1784	Open in IMG/M
3300018016\|Ga0187880_1057022	Not Available	2059	Open in IMG/M
3300018019\|Ga0187874_10287613	Not Available	670	Open in IMG/M
3300018020\|Ga0187861_10178352	Not Available	962	Open in IMG/M
3300018023\|Ga0187889_10287238	Not Available	731	Open in IMG/M
3300018030\|Ga0187869_10055685	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300018030\|Ga0187869_10448744	Not Available	614	Open in IMG/M
3300018033\|Ga0187867_10423581	Not Available	736	Open in IMG/M
3300018034\|Ga0187863_10010980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5864	Open in IMG/M
3300018035\|Ga0187875_10003471	All Organisms → cellular organisms → Bacteria	11158	Open in IMG/M
3300018037\|Ga0187883_10146736	Not Available	1216	Open in IMG/M
3300018043\|Ga0187887_10014826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5126	Open in IMG/M
3300018043\|Ga0187887_10041328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2859	Open in IMG/M
3300018043\|Ga0187887_10048889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2605	Open in IMG/M
3300018043\|Ga0187887_10084300	Not Available	1923	Open in IMG/M
3300018057\|Ga0187858_10822195	Not Available	549	Open in IMG/M
3300018090\|Ga0187770_11266359	Not Available	597	Open in IMG/M
3300022526\|Ga0224533_1017656	Not Available	1242	Open in IMG/M
3300022875\|Ga0224553_1037463	Not Available	1110	Open in IMG/M
3300023068\|Ga0224554_1016251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2389	Open in IMG/M
3300023091\|Ga0224559_1085181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1189	Open in IMG/M
3300023091\|Ga0224559_1096367	Not Available	1100	Open in IMG/M
3300023258\|Ga0224535_1063308	Not Available	832	Open in IMG/M
3300025453\|Ga0208455_1010265	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2363	Open in IMG/M
3300025498\|Ga0208819_1101577	Not Available	607	Open in IMG/M
3300025506\|Ga0208937_1014555	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2013	Open in IMG/M
3300025506\|Ga0208937_1144695	Not Available	504	Open in IMG/M
3300027854\|Ga0209517_10104575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1899	Open in IMG/M
3300027854\|Ga0209517_10170844	Not Available	1370	Open in IMG/M
3300027854\|Ga0209517_10354196	Not Available	839	Open in IMG/M
3300027905\|Ga0209415_10006186	All Organisms → cellular organisms → Bacteria → Acidobacteria	21390	Open in IMG/M
3300027905\|Ga0209415_10028612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8147	Open in IMG/M
3300028572\|Ga0302152_10065586	Not Available	1131	Open in IMG/M
3300028800\|Ga0265338_10953171	Not Available	582	Open in IMG/M
3300029889\|Ga0246001_1028651	Not Available	1468	Open in IMG/M
3300031250\|Ga0265331_10061417	Not Available	1774	Open in IMG/M
3300031344\|Ga0265316_10438249	Not Available	938	Open in IMG/M
3300032160\|Ga0311301_10524482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1745	Open in IMG/M
3300032160\|Ga0311301_12677799	Not Available	550	Open in IMG/M
3300032783\|Ga0335079_10193645	Not Available	2259	Open in IMG/M
3300032783\|Ga0335079_11224822	Not Available	754	Open in IMG/M
3300032805\|Ga0335078_10010245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	13888	Open in IMG/M
3300032805\|Ga0335078_10162125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3151	Open in IMG/M
3300033402\|Ga0326728_10013803	All Organisms → cellular organisms → Bacteria	17415	Open in IMG/M
3300033405\|Ga0326727_10381588	Not Available	1309	Open in IMG/M
3300033818\|Ga0334804_098036	Not Available	765	Open in IMG/M
3300033824\|Ga0334840_009153	All Organisms → cellular organisms → Bacteria → Acidobacteria	3716	Open in IMG/M
3300033977\|Ga0314861_0023133	Not Available	3855	Open in IMG/M
3300034282\|Ga0370492_0438338	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.80%
Terrestrial	Environmental → Terrestrial	37.25%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.80%
Soil	Environmental → Terrestrial → Soil	25.49%
Peat	Environmental → Terrestrial → Peat	11.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	59.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	44.12%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	29.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	14.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.98%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300022526	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 10-14	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100347743	3300001356	Peatlands Soil	MESDMQKLAQLRARTDRQLVDLISAGLDHGFSYARVLAAQDSQPQWATVREFQRRAEDAWREAHHLLPALNGIAEAERAALLRRVQILREILDQFAAETYPVKRAACF*
Ga0116136_10089262	3300009547	Peatland	MEPHVQKLAQLRARTDRQLVELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVQILREVLDQFAAETLPIKRAACF*
Ga0116133_10565682	3300009623	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQSQTPAMREFEQRAESAWREAHQLLPALRGTSETEHAALLDLRAAVLREVLDQFAADATPIRRAACF*
Ga0116119_11110701	3300009629	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0116114_10574182	3300009630	Peatland	MERQVLKLAQLRARTDRQLVELISARLDRGYAYARALAAPESEAQRAAVAEFQQRAEDAWREAHRLLPALNGIAETDRAALLRRAAILREILDQFAAATVPIRQAACF*
Ga0116102_10069751	3300009632	Peatland	ELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0116102_10183361	3300009632	Peatland	MERHTKKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAIL
Ga0116112_11499672	3300009636	Peatland	AQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILREVLDQFAAEARPIKRAACF*
Ga0116118_10396802	3300009637	Peatland	MEPHMQKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILREVLDQFAAEARPIKRAACF*
Ga0116122_11474701	3300009639	Peatland	TDRQLAELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0116122_11544772	3300009639	Peatland	MERHTKKLAQLRARTDRQLVELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVQILREVLDQFAAETLPIKRAACF*
Ga0116120_11878442	3300009641	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAETVPIRRAACF*
Ga0116134_10635142	3300009764	Peatland	MEPHMQKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESVPIRRAACF*
Ga0116219_101362142	3300009824	Peatlands Soil	MESDMQKLAQLRARTDRQLVELISARLDHGFSYARVMAAQDSLPQWTTVREFQKRAEDAWREAHHLLPALDGVAEPERAALLHRTQILREVLDQFAAETYPVKRAACF*
Ga0116223_105676411	3300009839	Peatlands Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGPAVREFELRAENAWREAHNLLPALRGVAEADRSALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0074045_100022618	3300010341	Bog Forest Soil	MERDVKKLAQLRARTDRQLADLISTKLDRGFAYARVLAARESQASSPAAREFQQRAEDAWREANHLLPALGRDSESGYAALLRRARILREVLDQFAVDALLIRRAAGF*
Ga0136449_1001591743	3300010379	Peatlands Soil	MERPTKLAQLRALTNRQLADLISARLDRGFACARVLAAGEAQAARAVGKGVQQRAEEAWREADRLLPALDPNAGTDRDALLDRARILREVLDQFAEDELQLRGATGS*
Ga0136449_1001876072	3300010379	Peatlands Soil	MERNTKKLAQLSARTDRQLVELISVRLDRGFAYARVLAARESQAPGAAEREFEQCAENAWREAHHLLPALRGVSETDRAALLRRAGILREVLDQFAAETAPIKRAACF*
Ga0136449_1016852471	3300010379	Peatlands Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVSEFEQRAEDAWREAYHLLPALRGVAETDRAALLRRTQILREVLDQFAAESAPIKRAACF*
Ga0181539_13570051	3300014151	Bog	MERQVLKLAQLRARTDRQLVELISARLDRGYAYARALAAPESEAQRAAVAEFQQRAEDAWREAHRLLPALNGIAETDRAALLRRAAILREILDQFAAATVPIR
Ga0181527_10400142	3300014153	Bog	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQELAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0181527_11138111	3300014153	Bog	MERQVLKLAQLRARTDRQLVELISARLDRGYAYARALAAPESEAQRAAVAEFQQRAEDAWREAHRLLPALNGIAETDRAALLRRAAI
Ga0181518_100137204	3300014156	Bog	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQVQGAAVREFEQRAESAWREAHQLLPALRGITESDRAALLRRAETLREVLDQFAAEAVPIRRAACF*
Ga0181517_100638633	3300014160	Bog	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALRDIAETDRAALLLRAEILREVLDQFAAETAPIQRAACF*
Ga0181529_1000067320	3300014161	Bog	MERHVKKLAQLRARTDRQLVELISAKLDRGFAYARVLAARDSGASRPMSREFLQRAEEAWHEANHLLPALGGNVGTDRAALLRRAGVLREVLDQFAADALPIRRAAGF*
Ga0181538_101988932	3300014162	Bog	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAE
Ga0181532_100266423	3300014164	Bog	MGPDMQKLAQLRARTDRQLAALISTKLDHGFSYARVLAARDSQAPWAAVMEVHQRAEDAWREAYRLLPALDGIAETERAALRRRTEALRGMLDEFAAEALPIKRAACF*
Ga0181535_100136125	3300014199	Bog	MDTRMQKLAQLRARTDRQLVELISARLDQGFSYARVLAAQDSEPQWTTIREFQGRAEDAWREAHHLLPALNGVAESDRASLLHRVNVLREVLDQFAAETYPVKRAACF*
Ga0181535_101870542	3300014199	Bog	MEPHVQKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESAPIKRAACF*
Ga0182013_100229723	3300014492	Bog	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESAPIKRAACF*
Ga0182011_109700972	3300014496	Fen	MERHTKKLAQLRARTDRQLVELISAKLDHGFSYARVLAARESRAVRAELMEFERRAEAAWREANQLLPALGGIDDAVRTALQRRAGILREVLDQFAADAYPIRRAAGY*
Ga0182019_111083423	3300014498	Fen	MERHTKKLAQLRARTDRQLVELISAKLDHGFSYARVLAARESRAVRAELMEFERRAEAAWREANQLLPALGGIDDAVRTALQRRAGILREVLDQF
Ga0181522_102064811	3300014657	Bog	QLVELISARLDQGFSYARVLAAQDSEPQWTTIREFQGRAEDAWREAHHLLPALNGVAESDRASLLHRVNVLREVLDQFAAETYPVKRAACF*
Ga0181519_106899631	3300014658	Bog	ARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF*
Ga0182027_104301471	3300014839	Fen	MKKLAQLRARTDRQLAELISAKLDDGFSYARVLTAREPHAGRAELREFERRAESAWREADHLLPALGGDDEAASGMLLRRAGILREVLDRFVAETYPIRRAAGF*
Ga0182027_118858392	3300014839	Fen	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSHAQGAAVKEFEQRAEKAWREAHHLLPALNGIAEADRAALLRRTGI
Ga0181511_11585131	3300016702	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQVQGAAVREFEQRAESAWREAHQLLPALRGITESDRAALLRRAETLREVLDQFAAEAVPIRRAACF
Ga0181507_10924512	3300016705	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQELAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187856_10051724	3300017925	Peatland	MEPHVQKLAQLRARTDRQLVELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVQILREVLDQFAAETLPIKRAACF
Ga0187849_11576381	3300017929	Peatland	MERQVLKLAQLRARTDRQLVELISARLDRGYAYARALAAPESEAQRAAVAEFQQRAEDAWREAHRLLPALNGIAETDRAALLRRAAILREILDQFAAATVPIRQAACF
Ga0187849_12771151	3300017929	Peatland	QLRARTDRQLVELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVQILREVLDQFAAETLPIKRAACF
Ga0187877_11107412	3300017931	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187848_102398401	3300017935	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187854_102443281	3300017938	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAETVPIRRAACF
Ga0187853_100369193	3300017940	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESVPIRRAACF
Ga0187850_102597061	3300017941	Peatland	MQKLAQLRARTDRQLAELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVQILREVLDQFAAETLPIKRAACF
Ga0187850_103804702	3300017941	Peatland	ELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187879_100427503	3300017946	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQSQTPAMREFEQRAESAWREAHQLLPALRGTSETEHAALLDLRAAVLREVLDQFAADATPIRRAACF
Ga0187847_100366102	3300017948	Peatland	MQKLAQLRARTDRQLVELISARLDQGFSYARVLAAQDSEPQWTTIREFQGRAEDAWREAHHLLPALNGVAESDRASLLHRVNVLREVLDQFAAETYPVKRAACF
Ga0187847_102363162	3300017948	Peatland	MEPHVQKLAQLRARTDRQLVELISARLDHGFSYSRVLATRESQGDWAALREFHQRAENAWCEAHRLLPALDGAAENDRTALLRRAEVLREELDRFTAKAFPIRRAACF
Ga0181520_100446844	3300017988	Bog	MERHVKKLAQLRARTDRQLVELISAKLDRGFAYARVLAARDSGASRPMSREFLQRAEEAWHEANHLLPALGGNVGTDRAALLRRAGVLREVLDQFAADALPIRRAAGF
Ga0181520_108709391	3300017988	Bog	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALRDIAETDRAALLLRAEILREVLDQFAAETAPIQRAACF
Ga0181520_110725181	3300017988	Bog	MEPHMQKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILRE
Ga0187868_10503362	3300018002	Peatland	MEPHVQKLAQLRARTDRQLVELISAKLDHGFSYARVLAARDAQAPWAAAREFHQRAEDAWREAHHLLPALDGVAETDRAVLLRRVRILREVLDQFAAETLPIKRAACF
Ga0187880_10570221	3300018016	Peatland	MEPHMQKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILREVLDQFAAEARPIKRAACF
Ga0187874_102876131	3300018019	Peatland	MERHTKKLAQLSARTDRQLVELISARLDRGFAYARVLAARDSQSQTPAMREFEQRAESAWREAHQLLPALRGTSETEHAALLDLRAAVLREVLDQFAADATPIRRAACF
Ga0187861_101783522	3300018020	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFA
Ga0187889_102872382	3300018023	Peatland	AQLRARTDRQLVELISARLDRGYAYARALAAPESEAQRAAVAEFQQRAEDAWREAHRLLPALNGIAETDRAALLRRAAILREILDQFAAATVPIRQAACF
Ga0187869_100556853	3300018030	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFPHARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAETVPIRRAACF
Ga0187869_104487442	3300018030	Peatland	MEPHMQKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGIAETDRAALLRRAAIL
Ga0187867_104235812	3300018033	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESAPIKRAACF
Ga0187863_100109804	3300018034	Peatland	MERHTKKLAQLRARTDRQLVDLISARLDRGFAYARVLAARDSQSQTPAMREFEQRAESAWREAHQLLPALRGTSETEHAALLDLRAAVLREVLDQFAADATPIRRAACF
Ga0187875_100034718	3300018035	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPGARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187883_101467361	3300018037	Peatland	TDRQLVELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0187887_100148261	3300018043	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAA
Ga0187887_100413281	3300018043	Peatland	LISARLDQGFSYARVLAAQDSEPQWTTIREFQGRAEDAWREAHHLLPALNGVAESDRASLLHRVNVLREVLDQFAAETYPVKRAACF
Ga0187887_100488891	3300018043	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAA
Ga0187887_100843001	3300018043	Peatland	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREV
Ga0187858_108221952	3300018057	Peatland	RQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILREVLDQFAAEARPIKRAACF
Ga0187770_112663591	3300018090	Tropical Peatland	MERQMQKLAQLRARTDRQLAELISASLDHGFAYSRVFAARASKADWAAAREFRQRAEEAWREAHRLLPALDGTAQAERAALQHRAEILREVLDQSAAEITPMRRAACF
Ga0224533_10176561	3300022526	Soil	MERHTKKLAQLRARTDRQLVELISAKLDHGFSYARVLAARESRAARAELMEFERRAEAAWREANQLLPALGGIEDAARAALLRRAGILREVLDQFA
Ga0224553_10374631	3300022875	Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLD
Ga0224554_10162511	3300023068	Soil	RARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAETVPIRRAACF
Ga0224559_10851811	3300023091	Soil	DDGFSYARVLTAREPHAGRAELREFERRAESAWREADHLLPALGGDDEAASGMLLRRAGILREVLDRFVAETYPIRRAAGF
Ga0224559_10963671	3300023091	Soil	MERHTKKLAQLRARTDRQLVELISAKLDHGFSYARVLAARESRAARAELMEFERRAEAAWREANQLLPALGGIEDAARAALLRRAGILREVLDQFAADAYPIRRAAGY
Ga0224535_10633081	3300023258	Soil	MKKLAQLRARTDRQLAELISAKLDDGFSYARVLTAREPHAGRAELREFERRAESAWREADHLLPALGGDDEAASGMLLRRAGILREVLDRFVAETYPIRRAAGF
Ga0208455_10102651	3300025453	Peatland	MERHTKKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0208819_11015772	3300025498	Peatland	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAGILREVLDQFAAETVPI
Ga0208937_10145551	3300025506	Peatland	QLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLDQFAAETVPIRRAACF
Ga0208937_11446952	3300025506	Peatland	MQKLAQLRARTDRQLAELISAKLDRGFAYARVLAVRDSQSEWATLRGFEQRAENAWREAHRLLPALNGVVETDRIALLRRAAILREVLDQFAAEARPIKRAACF
Ga0209517_101045752	3300027854	Peatlands Soil	MESDMQKLAQLRARTDRQLVELISARLDHGFSYARVMAAQDSLPQWTTVREFQKRAEDAWREAHHLLPALDGVAEPERAALLHRTQILREVLDQFAAETYPVKRAACF
Ga0209517_101708441	3300027854	Peatlands Soil	MESDMQKLAQLRARTDRQLVDLISAGLDHGFSYARVLAAQDSQPQWATVREFQRRAEDAWREAHHLLPALNGIAEAERAALLRRVQILREILDQFAAETYPVKRAAC
Ga0209517_103541962	3300027854	Peatlands Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGPAVREFELRAENAWREAHNLLPALRGVAEADRSALLRRAETLREVLDQFAAETVPIRRAACF
Ga0209415_100061863	3300027905	Peatlands Soil	MESDMQKLAQLRARTDRQLVDLISAGLDHGFSYARVLAAQDSQPQWATVREFQRRAEDAWREAHHLLPALNGIAEAERAALLRRVQILREILDQFAAETYPVKRAACF
Ga0209415_100286123	3300027905	Peatlands Soil	MERPTKLAQLRALTNRQLADLISARLDRGFACARVLAAGEAQAARAAGKGVQQRAEEAWREADRLLPALDPNAGTDRDALLDRARILREVLDQFAEDELQLRGATGS
Ga0302152_100655862	3300028572	Bog	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDLQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRAALLRRAGILREVLDQFAAESAPIKRAACF
Ga0265338_109531712	3300028800	Rhizosphere	MESRMQKLAQLRARTDRQLVVLISARIDHGFAYSRVLAARNSQADWAASKEYQQRAEDAWREAYRLLPALDGTSETDRAALLRRAEMLRQ
Ga0246001_10286512	3300029889	Peat	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAETLREVLD
Ga0265331_100614172	3300031250	Rhizosphere	MESRMQKLAQLRARTDRQLVVLISARIDHGFAYSRVLAARNSQADWAASKEYQQRAEDAWREAYRLLPALDGTSETDRAALLRRAEMLRQLLDQFAAETAPLKRAACF
Ga0265316_104382491	3300031344	Rhizosphere	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSHAQGAAVKELEQRAEKAWREAHHLLPALNGIAEADRAALLRRTGILREVLDQFAAETVPLKRAACF
Ga0311301_105244822	3300032160	Peatlands Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVSEFEQRAEDAWREAYHLLPALRGVAETDRAALLRRTQILREVLDQFAAESAPIKRAACF
Ga0311301_126777992	3300032160	Peatlands Soil	VELISVRLDRGFAYARVLAARESQAPGAAEREFEQCAENAWREAHHLLPALRGVSETDRAALLRRAGILREVLDQFAAETAPIKRAACF
Ga0335079_101936452	3300032783	Soil	MQKLAQLRARTDGQLVELISARLDVGFSYARVLAAQDSQPQWGAVREFQQRAEDAWREAHRLLPALDGSAEIERSALARRAQVLREVLDQFAADAYPVKRAACF
Ga0335079_112248221	3300032783	Soil	MDPRMQKLAQLRARTDRQLVELISAALDRGFAYARVLDATKSQAEWTASREFHQRAKNAWCEARRLLTALDGSEEKDHAALLRRAEILRAELDQLSAEIFPVRRAACF
Ga0335078_100102454	3300032805	Soil	MEPHVQKLAQLRARTDRQVAEWISAKLDQGFSYARVVAAQGSQPQWAVLREFQQRAEDAWREADHLLPALDGMAEAERTALQRRAQVLREVLDQFAADVYPIQRAACF
Ga0335078_101621253	3300032805	Soil	MEPRMQKLAQLRARTDRQLAELISAALDRGFAYARVIAATKSHAEWSASREFHRRAKDAWCEARRLMPALDGSAEKDRVALLRRAEMLRLELDQLAAELFPVRRAACF
Ga0326728_1001380316	3300033402	Peat Soil	MERHTKKLAQLRARTDRQLAELISARLDRGFAYARVLAARDSQAQGPAARDFELRAENAWREAHNLLPALRGIAETDRAALLRRAGTLREVLDQFAAETVPIRRAACF
Ga0326727_103815882	3300033405	Peat Soil	MERHTKKLAQLRARTDRQLLELISAKLDHGFHYARVLAARESRSARAELKEFEQRAEAAWREVNQLLPALGGIDDATRAALTRRAGILREVLDQFAADAYPIRRAAGF
Ga0334804_098036_1_300	3300033818	Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRATLLRRAGILREVLDQFAAESA
Ga0334840_009153_1744_2070	3300033824	Soil	MERHTKKLAQLRARTDRQLVELISARLDRGFAYARVLAARDSQAQGAAVREFEQRAENAWREAHHLLPALNGIAETDRATLLRRAGILREVLDQFAAESAPIKRAACF
Ga0314861_0023133_3321_3647	3300033977	Peatland	MESRMQKLAQLRARTDRQLAELISATLDRGFAYARILAARDSQAEWAAAREFHERAKSAWCEARRLLPALDGSAEKERAALLRRAEMLREELDRLAAEMFPVRRAACF
Ga0370492_0438338_206_529	3300034282	Untreated Peat Soil	ERHTKKLAQLRARTDRQLVELISARLDSGFRYARVLAARESQGHDPALREFQQRAEDAWREAHHLLPALDGTADTDRAALQRRSEILREVLDEFAVETVPIKRAACF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100199

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences