Metagenome Family F100198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100198
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	55 residues
Representative Sequence	MGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Number of Associated Samples	52
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.00 %
% of genes near scaffold ends (potentially truncated)	31.37 %
% of genes from short scaffolds (< 2000 bps)	78.43 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (38.235 % of family members)
Environment Ontology (ENVO)	Unclassified (88.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.804 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.48% β-sheet: 34.52% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
b.68.1.2: Sialidases	d3ju4a1	3ju4	0.62
b.68.1.2: Sialidases	d3ju4a1	3ju4	0.62
d.198.1.2: Type III secretory system chaperone-like	d2plga1	2plg	0.61
d.198.1.2: Type III secretory system chaperone-like	d2plga1	2plg	0.61
c.37.1.12: P-loop containing nucleoside triphosphate hydrolases	d1qhla_	1qhl	0.6
b.60.1.0: Lipocalins	d4ge1a_	4ge1	0.6
d.38.1.0: Thioesterase/thiol ester dehydrase-isomerase	d5szva_	5szv	0.6
c.37.1.12: P-loop containing nucleoside triphosphate hydrolases	d1qhla_	1qhl	0.6
b.60.1.0: Lipocalins	d4ge1a_	4ge1	0.6
d.38.1.0: Thioesterase/thiol ester dehydrase-isomerase	d5szva_	5szv	0.6

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13487	HD_5	7.84
PF00313	CSD	5.88
PF13620	CarboxypepD_reg	3.92
PF00149	Metallophos	1.96
PF00583	Acetyltransf_1	1.96
PF01546	Peptidase_M20	1.96
PF00596	Aldolase_II	1.96
PF08448	PAS_4	1.96
PF13460	NAD_binding_10	0.98
PF03458	Gly_transporter	0.98
PF00239	Resolvase	0.98
PF12860	PAS_7	0.98
PF00158	Sigma54_activat	0.98
PF13683	rve_3	0.98
PF10050	DUF2284	0.98
PF13440	Polysacc_synt_3	0.98
PF02769	AIRS_C	0.98
PF00216	Bac_DNA_binding	0.98
PF07366	SnoaL	0.98
PF08668	HDOD	0.98
PF12686	DUF3800	0.98
PF02954	HTH_8	0.98
PF01751	Toprim	0.98
PF08483	Obsolete Pfam Family	0.98
PF00805	Pentapeptide	0.98
PF15919	HicB_lk_antitox	0.98
PF04055	Radical_SAM	0.98
PF01979	Amidohydro_1	0.98
PF13458	Peripla_BP_6	0.98
PF13091	PLDc_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.98
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.98
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.98
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.98
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.86 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.86 %
Unclassified	root	N/A	43.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.88 %
Unclassified	root	N/A	43.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.51 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	20.59 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.94 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.96 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	20.59 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.94 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.96 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	7.84 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	5.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Chloroflexi bacterium RBG_16_50_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	0.98 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
Chloroflexi bacterium B3_Chlor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	0.98 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	5.88 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	4.90 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.96 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.98 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.98 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.98 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.98 %
Chloroflexi bacterium RBG_16_50_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	0.98 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.98 %
Chloroflexi bacterium B3_Chlor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
unclassified Syntrophorhabdaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae	4.90 %
Desulfofustis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis	4.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.98 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.98 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.98 %
Syntrophorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	0.98 %
Desulfatiglans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.98 %
Chloroflexi bacterium RBG_16_50_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	0.98 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.98 %
Chloroflexi bacterium B3_Chlor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
unclassified Desulfofustis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis	4.90 %
Syntrophorhabdaceae bacterium PtaU1.Bin034	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	4.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.98 %
Desulfatiglans anilini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans → Desulfatiglans anilini	0.98 %
Syntrophorhabdus aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans	0.98 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.98 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.98 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.98 %
Chloroflexi bacterium RBG_16_50_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	0.98 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.98 %
Chloroflexi bacterium B3_Chlor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.14 %
Desulfofustis sp. PB-SRB1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	4.90 %
Syntrophorhabdaceae bacterium PtaU1.Bin034	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	4.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.98 %
Desulfatiglans anilini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans → Desulfatiglans anilini	0.98 %
Syntrophorhabdus aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans	0.98 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.98 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.98 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.98 %
Chloroflexi bacterium RBG_16_50_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	0.98 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.98 %
Chloroflexi bacterium B3_Chlor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009548\|Ga0116107_1199556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium B3_Chlor	526	Open in IMG/M
3300009549\|Ga0116137_1024346	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300009549\|Ga0116137_1075905	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300009615\|Ga0116103_1145018	Not Available	578	Open in IMG/M
3300009616\|Ga0116111_1166552	Not Available	517	Open in IMG/M
3300009618\|Ga0116127_1185258	Not Available	508	Open in IMG/M
3300009634\|Ga0116124_1076745	Not Available	958	Open in IMG/M
3300009637\|Ga0116118_1128454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans → Desulfatiglans anilini	833	Open in IMG/M
3300009637\|Ga0116118_1271975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	516	Open in IMG/M
3300009643\|Ga0116110_1102842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	969	Open in IMG/M
3300009643\|Ga0116110_1112609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	917	Open in IMG/M
3300009762\|Ga0116130_1276253	Not Available	536	Open in IMG/M
3300009764\|Ga0116134_1131245	Not Available	891	Open in IMG/M
3300010379\|Ga0136449_100302589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	2914	Open in IMG/M
3300010379\|Ga0136449_102051571	Not Available	842	Open in IMG/M
3300014151\|Ga0181539_1112269	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300014151\|Ga0181539_1205598	Not Available	754	Open in IMG/M
3300014151\|Ga0181539_1319226	Not Available	566	Open in IMG/M
3300014152\|Ga0181533_1157136	Not Available	922	Open in IMG/M
3300014152\|Ga0181533_1174023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	855	Open in IMG/M
3300014158\|Ga0181521_10545640	Not Available	549	Open in IMG/M
3300014162\|Ga0181538_10571331	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300014491\|Ga0182014_10203822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	1067	Open in IMG/M
3300017925\|Ga0187856_1120355	Not Available	1019	Open in IMG/M
3300017929\|Ga0187849_1036023	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300017929\|Ga0187849_1091471	Not Available	1307	Open in IMG/M
3300017929\|Ga0187849_1124846	Not Available	1063	Open in IMG/M
3300017929\|Ga0187849_1187837	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300017929\|Ga0187849_1279375	Not Available	629	Open in IMG/M
3300017931\|Ga0187877_1161273	Not Available	896	Open in IMG/M
3300017931\|Ga0187877_1410570	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300017935\|Ga0187848_10010951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	5254	Open in IMG/M
3300017935\|Ga0187848_10017238	All Organisms → cellular organisms → Bacteria	3888	Open in IMG/M
3300017935\|Ga0187848_10031635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	2665	Open in IMG/M
3300017935\|Ga0187848_10090173	Not Available	1409	Open in IMG/M
3300017935\|Ga0187848_10120960	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300017935\|Ga0187848_10173343	Not Available	938	Open in IMG/M
3300017935\|Ga0187848_10396081	Not Available	569	Open in IMG/M
3300017938\|Ga0187854_10279480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	718	Open in IMG/M
3300017940\|Ga0187853_10232134	Not Available	853	Open in IMG/M
3300017940\|Ga0187853_10373522	Not Available	634	Open in IMG/M
3300017940\|Ga0187853_10502129	Not Available	529	Open in IMG/M
3300017946\|Ga0187879_10186218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1166	Open in IMG/M
3300017946\|Ga0187879_10315295	Not Available	868	Open in IMG/M
3300017959\|Ga0187779_10486915	Not Available	814	Open in IMG/M
3300017961\|Ga0187778_10237742	All Organisms → cellular organisms → Bacteria → Proteobacteria	1167	Open in IMG/M
3300017973\|Ga0187780_10139655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1678	Open in IMG/M
3300017973\|Ga0187780_10594889	Not Available	794	Open in IMG/M
3300017975\|Ga0187782_10083841	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300017996\|Ga0187891_1311015	Not Available	512	Open in IMG/M
3300017998\|Ga0187870_1112178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1039	Open in IMG/M
3300018002\|Ga0187868_1247090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	603	Open in IMG/M
3300018003\|Ga0187876_1046826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	1807	Open in IMG/M
3300018003\|Ga0187876_1243924	Not Available	588	Open in IMG/M
3300018016\|Ga0187880_1009239	All Organisms → cellular organisms → Bacteria	6609	Open in IMG/M
3300018017\|Ga0187872_10144376	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300018017\|Ga0187872_10185110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	971	Open in IMG/M
3300018020\|Ga0187861_10447440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	537	Open in IMG/M
3300018024\|Ga0187881_10023945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3297	Open in IMG/M
3300018024\|Ga0187881_10091822	Not Available	1384	Open in IMG/M
3300018024\|Ga0187881_10104705	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300018024\|Ga0187881_10105421	Not Available	1269	Open in IMG/M
3300018025\|Ga0187885_10314430	Not Available	707	Open in IMG/M
3300018030\|Ga0187869_10527509	Not Available	560	Open in IMG/M
3300018033\|Ga0187867_10360142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → unclassified Desulfofustis → Desulfofustis sp. PB-SRB1	809	Open in IMG/M
3300018046\|Ga0187851_10120886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1608	Open in IMG/M
3300018046\|Ga0187851_10734658	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300018062\|Ga0187784_10282933	Not Available	1348	Open in IMG/M
3300018062\|Ga0187784_10329381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300018062\|Ga0187784_10976000	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	674	Open in IMG/M
3300018085\|Ga0187772_10330197	Not Available	1050	Open in IMG/M
3300018085\|Ga0187772_10369675	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300018086\|Ga0187769_10374024	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300018086\|Ga0187769_10500345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	917	Open in IMG/M
3300018086\|Ga0187769_10871315	Not Available	681	Open in IMG/M
3300018086\|Ga0187769_10932699	Not Available	657	Open in IMG/M
3300018088\|Ga0187771_10929288	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300025472\|Ga0208692_1007430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4135	Open in IMG/M
3300025472\|Ga0208692_1105656	Not Available	548	Open in IMG/M
3300027854\|Ga0209517_10429497	Not Available	735	Open in IMG/M
3300032160\|Ga0311301_11955286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	688	Open in IMG/M
3300032805\|Ga0335078_10005897	All Organisms → cellular organisms → Bacteria	18127	Open in IMG/M
3300032805\|Ga0335078_10683371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1276	Open in IMG/M
3300032805\|Ga0335078_10754550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1195	Open in IMG/M
3300032805\|Ga0335078_10964958	Not Available	1015	Open in IMG/M
3300032805\|Ga0335078_12016541	Not Available	617	Open in IMG/M
3300032892\|Ga0335081_10360766	Not Available	1889	Open in IMG/M
3300032893\|Ga0335069_11006081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300033402\|Ga0326728_10019113	All Organisms → cellular organisms → Bacteria	13347	Open in IMG/M
3300033402\|Ga0326728_10032595	All Organisms → cellular organisms → Bacteria	8659	Open in IMG/M
3300033402\|Ga0326728_10045600	All Organisms → cellular organisms → Bacteria → Proteobacteria	6619	Open in IMG/M
3300033402\|Ga0326728_10052533	All Organisms → cellular organisms → Bacteria → Proteobacteria	5893	Open in IMG/M
3300033402\|Ga0326728_10071152	All Organisms → cellular organisms → Bacteria	4618	Open in IMG/M
3300033402\|Ga0326728_10074324	All Organisms → cellular organisms → Bacteria	4461	Open in IMG/M
3300033402\|Ga0326728_10097892	All Organisms → cellular organisms → Archaea	3572	Open in IMG/M
3300033402\|Ga0326728_10108723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	3279	Open in IMG/M
3300033402\|Ga0326728_10159828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans	2408	Open in IMG/M
3300033402\|Ga0326728_10694797	Not Available	766	Open in IMG/M
3300033405\|Ga0326727_10289206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_50_9	1631	Open in IMG/M
3300033405\|Ga0326727_10564355	Not Available	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.80%
Terrestrial	Environmental → Terrestrial	40.20%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.80%
Soil	Environmental → Terrestrial → Soil	28.43%
Peat	Environmental → Terrestrial → Peat	11.76%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	59.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	45.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.53%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	38.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	15.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	14.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116107_11995561	3300009548	Peatland	MGQTSRIVTIIEGVQVIEVTTYDPEVGPIETYYLVRGKRHETLKQAIVAAK*
Ga0116137_10243463	3300009549	Peatland	MGQTSRIVTIVNGVQAVEVTTHDPEGEPIETYYRVRGEKYESLKDAMTAAG*
Ga0116137_10759052	3300009549	Peatland	MGQTSRIVTIVNGVEVIEVTVHDPEGDPIETSYHIRGEKYESLRQAMEAAKGIGDR*
Ga0116103_11450182	3300009615	Peatland	MAMGQTSRIVTIIEGVQVIEAKTHDPEGDPIEAYYLGPGEKQKSLR
Ga0116111_11665521	3300009616	Peatland	MGQTSRIVTIIEGVQVIEVTTNDQEGDPTETRYQVRGEKYETLKQAMEAAS
Ga0116127_11852581	3300009618	Peatland	MGQTSRIVTIIEGVEVMEVTVHDLEGNPVETSYHVRGEKYESLRQAMEAVKGVAKE*
Ga0116124_10767452	3300009634	Peatland	MAMGQTSRIVTIIAGVEVIEVTTHDPEGEPIETRYQVRGEQYETLQEARRAAR
Ga0116118_11284542	3300009637	Peatland	MGQTSRIVTIVEGVEVIEVTTHNPEGDPIEMRYHVRGEKYETLRLAMKAARAIAEG*
Ga0116118_12719751	3300009637	Peatland	NGVEIIEVTVNDQEGDPTATHYQIRGEKYETLRQAMEVAKGIEKE*
Ga0116110_11028421	3300009643	Peatland	MGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG*
Ga0116110_11126091	3300009643	Peatland	MGQTSRIVTIIEGVQVIEVTTHDPEGGPMETYYLVRAEKYETLKQAM
Ga0116130_12762531	3300009762	Peatland	MGQTSRIVTIIDGVEVMEVTVHDLEGNPVETSYHVRGEKYESLRQAMEVVKGVAKE*
Ga0116134_11312452	3300009764	Peatland	MGQTSRIVTIVDGVEVIEVTVHDPEGDPVETHYYIRGEKYETLRQAIEAA
Ga0136449_1003025892	3300010379	Peatlands Soil	MGEGGKMGKTSRLITIIEGVHVMEVTTHDSQGDPIETYYLVLGEKHESLKLAMKAAMGER
Ga0136449_1020515712	3300010379	Peatlands Soil	MGQTSRIVTIVNGVEIIEVTVNDQEGDPIETHYQIRGEKYETLRQAMEVAKGIEKK*
Ga0181539_11122691	3300014151	Bog	DGVEVMEVTVHDLEGDPIETRYHVRGERYEALSQAMRAASVSRI*
Ga0181539_12055982	3300014151	Bog	GQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG*
Ga0181539_13192261	3300014151	Bog	MGQTSRIVTIIEGVQVIEVTTHDPEGGPMETYYLVRAEKYETLKQAMEAAGQEP
Ga0181533_11571361	3300014152	Bog	MGQTSRIVTIVDGVEVIEVTVHDPEGDPVETHYYIRGEKYETLRQAIEAAKVAEKEQ*
Ga0181533_11740232	3300014152	Bog	MGQTSRIVTIVNGVEIIEVTVNDQEGDPTATHYQIRGEKYETLRQAMEVAKGIEKE*
Ga0181521_105456402	3300014158	Bog	LSYSKWAGVAMGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG*
Ga0181538_105713311	3300014162	Bog	IVTIIDGVEVMEVTVHDLEGDPIETRYHVRGERYEALSQAMRAASVSRI*
Ga0182014_102038222	3300014491	Bog	MGQTSRIVTIIDGVEVMEVTVHDLEGDPISTHYHVRGERYETLKQAMRAASVSRI*
Ga0187856_11203551	3300017925	Peatland	HNQTRMMMAQTSRIVTIVEGAQVIEVTTHDPDGDTVETHYMVKGEKYETLKQAMEAARAISEG
Ga0187849_10360232	3300017929	Peatland	MGQTSRIVTIVNGVQAVEVTTHDPEGEPIETYYRVRGEKYESLKDAMTAAG
Ga0187849_10914711	3300017929	Peatland	MGQISRVVTIIDGVEVIEVTVYDPEGDPIETHYYVQGEKYATLREAREAAKGIGER
Ga0187849_11248461	3300017929	Peatland	MGQTSRIVTIIEGVEVMEVTVHDLEGNPVETSYHVRGEKYESLRQAMEAVKGVAKE
Ga0187849_11878372	3300017929	Peatland	MGQTSRIVTIIEGVQVIEVTTYDPEVGPIETYYLVRGKRHETLKQAIVAAK
Ga0187849_12793752	3300017929	Peatland	MGQTSRIVTIVDGVQVMEVTTHDSQGNPVETFYLVRGEKYETLKQTMKAARDAREGDVNG
Ga0187877_11612732	3300017931	Peatland	MGQTSRIVTIVNGVEVIEVTVHDPEGDPIETSYHIRGEKYESLRQAMEAAKGIGDR
Ga0187877_14105702	3300017931	Peatland	MGQTSRIVTIIEGVEVIEVTTHNPEGDPIEMRYHVRGEKYETLRLAMKAARAIAEG
Ga0187848_100109514	3300017935	Peatland	MGQTSRIVTIVDGVQIIEVTAHDPDGDPVETHYMVRGEKYEALKQAMEAARADREGGPTG
Ga0187848_100172383	3300017935	Peatland	MGQTSRIVTIVEGVEVIEVTTHNPEGDPIEMRYHVRGEKYETLRLAMKAARAIAEG
Ga0187848_100316353	3300017935	Peatland	MGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Ga0187848_100901733	3300017935	Peatland	MGQTSRIVTIVDGVEVIEVTVHDPEGDPVETHYYIRGEKYETLRQAIEAAKVAEKEQ
Ga0187848_101209602	3300017935	Peatland	MGQTSRIVTIVDGVWVIEVTAHDQGGDPVETYYVVQGEKFETLKQAMGAARGDREGGGTG
Ga0187848_101733432	3300017935	Peatland	MGQTSRIVTIIEGVEVIEVTVHDPKGGPIETHYYVRGEKYKTLKKAMEAASRVSQSR
Ga0187848_103960811	3300017935	Peatland	MAQTSRIVTIVEGAQVIEVTTHDPDGDTVETHYMVKGEKYETLKQAMEAARAISEG
Ga0187854_102794801	3300017938	Peatland	MGQTSRIVTIVNGVEVIEVTVHDPEGDPIETSYHIRREKYESLRQAMEAAKGIGDR
Ga0187853_102321344	3300017940	Peatland	IVTIVDGVEVIEVTVHDPEGDPVETHYYIRGEKYETLRQAIEAAKVAEKEQ
Ga0187853_103735222	3300017940	Peatland	VVTIIDGVEVIEVTVYDPEGDPIETHYYVQGEKYATLREAREAAKGIGER
Ga0187853_105021292	3300017940	Peatland	MGQTSRIVTIIDGVEVMEVTVHDLEGNPVETSYHVRGEKYESLRQAMEVVKGVAK
Ga0187879_101862183	3300017946	Peatland	GVAMGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Ga0187879_103152952	3300017946	Peatland	MGQTSRIVTIVDGVQVIEVTTHDPDGDPVETRYPVRGEKFETLKEAMEAAV
Ga0187779_104869152	3300017959	Tropical Peatland	MGQTSRIVTIIEGVQVMEITTHDRHGDPVETHYVVLGQRYGTLRQAMEAARGEREGTFKG
Ga0187778_102377421	3300017961	Tropical Peatland	MAQTSRIVTIVDGVEVIEVTIRDAGGDRIETHYQVGGERHETLRVAMEAARKISESR
Ga0187780_101326721	3300017973	Tropical Peatland	LVATRQTSRIVTIINGVQVIEVTAHDPDGDPVETYYLVRGEKFETLRQAVQAARQHREGGPTG
Ga0187780_101396552	3300017973	Tropical Peatland	MGQTSRIVTIIEGIQVMEVTTHDTQGDPIETYYRVRGERYDTLRHAMKAARGEVEGGPTS
Ga0187780_105948892	3300017973	Tropical Peatland	MGQTSRIVTIIEGIQVIEVTTHDPQGDPLEMHYVVRGEKHETLKQAMKAARGDVEGGPRG
Ga0187782_100838413	3300017975	Tropical Peatland	MGQTSRIVTIVDGVEVIEVTLRDEEGDRIETHYQVGGENHETLRKAMEEARKISESK
Ga0187891_13110151	3300017996	Peatland	VAMGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Ga0187870_11121782	3300017998	Peatland	MGQTSRIVTIVNGIEITEVTVHDLEGNPIETSYHIRGEKHETLRQAMEAAKGTGERR
Ga0187868_12470901	3300018002	Peatland	LSSSLHNQARVTMGQTSRIVTIVNGVEIIEVTVNDQEGDPTATHYQIRGEKYETLRQAMEVAKGIEKE
Ga0187876_10468263	3300018003	Peatland	MGQTSRIVTIVNGVEIIEVTVNDQEGDPTATHYQIRGEKYETLRQAMEVAKGIEKE
Ga0187876_12439242	3300018003	Peatland	LSYSKWAGVAMGQTSRIVTIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Ga0187880_100923914	3300018016	Peatland	MGQTSRIVTIVDGVEVIEATVHDPEGDPIETYYRVKGEKFETLKQAMEA
Ga0187872_101443761	3300018017	Peatland	QTSRIVTIVEGVEVIEVTTHNPEGDPIEMRYHVRGEKYETLRLAMKAARAIAEG
Ga0187872_101851101	3300018017	Peatland	TIVEGVQVIEVTIHDPEGDPIETYYRVKGEKYESLAQAMKAARAVSEG
Ga0187861_104474401	3300018020	Peatland	MGQTSRIVTVIEGVQVIEVTTNDREGDPTETRYQVRGEKYETLRQAMEAARGIGER
Ga0187881_100239454	3300018024	Peatland	MGQTSRIVTIIEGVQVIEAKTHDPEGDPIEAYYLGPGEKQKSLRQATEAADS
Ga0187881_100918221	3300018024	Peatland	MGQTSRIVTIIDGVQVMEVTSHDSQGDPVETCYLVGGERYGTLKQAM
Ga0187881_101047052	3300018024	Peatland	MGQTSRIVTIVNGVEVIEVTVHDPEGDPIETSYHIRGEKYESLRQAMEAVKGVAKE
Ga0187881_101054211	3300018024	Peatland	GQTSRIVTIVNGVQAVEVTTHDPEGEPIETYYRVRGEKYESLKDAMTAAG
Ga0187885_103144303	3300018025	Peatland	MGQTSRIVTIIEGVQVIEVTTYAPEVGPIETYYLVRGKRHETLKQAIVA
Ga0187869_105275091	3300018030	Peatland	MGQTSRIVTIIEGVQVIEVTTYDPEVGHIETYYLVRGKRHETLKQAIVAAK
Ga0187867_103601423	3300018033	Peatland	SRIVTIVNGVEIIEVTVNDQEGDPTATHYQIRGEKYETLRQAMEVAKGIEKE
Ga0187851_101208864	3300018046	Peatland	GQTSRIVTMIDCVQVTEVTVNNLEGDPIETRYYVRGEKYATLRQAMRAANSVSQFQ
Ga0187851_107346581	3300018046	Peatland	MGLTSRIVTVIEGLTVMEVTIHDPDGDPIETYYTVRGEKYETLKEAMEATRKTD
Ga0187784_102829333	3300018062	Tropical Peatland	MSQTSRIVTIIEGVVVMEVTIYDQEGDPVETRYHVRGETYETLKQAMEAAEGERED
Ga0187784_103293813	3300018062	Tropical Peatland	MGQTSRIVTIVDGVEVIEVTLRDEEGDRIETHYQVGGENHETLRKAMEEARKIS
Ga0187784_109760002	3300018062	Tropical Peatland	MGQTSRIVTIVDDVQVTEVTTRDQAGDPVETSYRVRGERYETLAQAMKAARGEGDENRRG
Ga0187772_103301972	3300018085	Tropical Peatland	MGQTSRIVTIVGGVQVIEVTTHDQDGDPIETCYLVRGERYETLKQAMEAVG
Ga0187772_103696752	3300018085	Tropical Peatland	MGQTSRIVTIVDGVEVIEVTLRDGEGDRIETHYQVGGENHETLRKAMEAARKISESR
Ga0187769_103740242	3300018086	Tropical Peatland	MGQTSRIVTIIDGIEVIEVTLRDEDGDRIEAHYQVGGENHETLRKAMEEARKISESR
Ga0187769_105003452	3300018086	Tropical Peatland	MGQTSRIVTIVGGVQVIEVTTYDQDGDPIETCYLVRGERYETLKQAMEAVG
Ga0187769_108713152	3300018086	Tropical Peatland	MEQTSRIVTIVDGIQVIEVTKHNADGDPIETYYVVGDERYETLRQAMEAARKEG
Ga0187769_109326991	3300018086	Tropical Peatland	MGQTSRIVTIVDGVQVIDMTVHDPNEDLVETFYQVRGARYEDLSTAMKAARGEVEGGPKG
Ga0187771_109292881	3300018088	Tropical Peatland	MGQTSRIVTIVDGVQVIEVTTHDQDGDPIETCYLVRGERYETLKQAMEAAG
Ga0208692_10074306	3300025472	Peatland	MGQTSRIVTIVNGVEVIEVTVHDPEGDPIETSYHIRGEKYESLRQAME
Ga0208692_11056563	3300025472	Peatland	MGQTSRIVTIVDGVQVMEVTTHDSQGNPVETFYLVRGEKYETLKQTMKAARDAR
Ga0209517_104294972	3300027854	Peatlands Soil	MGKTSRLITIIEGVHVMEVTTHDSQGDPIETYYLVLGEKHESLKLAMKAAMGER
Ga0311301_119552861	3300032160	Peatlands Soil	MGQTSRIVTIVNGVEIIEVTVNDQEGDPIETHYQIRGEKYETLRQAMEVAKGIEKK
Ga0335085_108968991	3300032770	Soil	MGQTSRIVTIVDGVQVTEVTAHNQDGDPVETHYVVKGDKYETLKEAMKAARNEES
Ga0335078_1000589711	3300032805	Soil	MGQTSRIVTIVDGIEVIEVTLRDEEGDRIETHYQVGGENHETLRVAMEAARKISESR
Ga0335078_106833712	3300032805	Soil	MGQTSRIVTIVDGVEVMEVTTNDLDGDPVETSYSVRGEKYETLKQAMGAARAISEE
Ga0335078_107545501	3300032805	Soil	MGQTSRIVTIVEGVQVIEVTIHDPEGDPVETYYRVKGEKYESLAQAMKAARAVSEG
Ga0335078_109649581	3300032805	Soil	PVREMGHVSRIVTIIEGVQVIEVTTHDSQGDPLETHYVVRGEKYETLKQAMRAARGEG
Ga0335078_120165411	3300032805	Soil	MGQTSRIVTIIEGVQVIEVTTHNEQGDPIETFYRVKGEKFETLTQAMKAARGDREGGLTR
Ga0335081_103607662	3300032892	Soil	MGQTSRTVTIVDGVEVMEVIVHDPEGNPLKTSYQVRGEKYETLKEARRAAQEMSGSG
Ga0335069_110060812	3300032893	Soil	MGQTSRMVTIVDGVQVIEVTTHDPDGNPVETHYMVRGEKYETLKQAMKAARSDR
Ga0326728_100191136	3300033402	Peat Soil	MPMRQISRIVTIIEGVEVIEVTSRDPEGDPIETRYRVRGEKYETLKEAMDAASRASRSR
Ga0326728_100325953	3300033402	Peat Soil	MGQTSRIVTIVEGVQVIEVTIHDPEGDPMETYYRVKGEKYESLARAMKAARAVSEG
Ga0326728_100456004	3300033402	Peat Soil	MAQTSRIVTIIEGVQVIEVTAHDPQGDPTETYYLVRGEKYETLKQAMEAAG
Ga0326728_100525334	3300033402	Peat Soil	MGQTSRIVTIIEGVQVIEVTTHDQEGNPIETRYHVRGEKFETLKQAMEAARGDREGGLTG
Ga0326728_100711522	3300033402	Peat Soil	MGQVSRIVTIIDGVEVMEVTVHDLEGDPIETRYHVRGERYEALSQAMRAASVSRI
Ga0326728_100743245	3300033402	Peat Soil	MGQTSRIVTIIEGVQVIEVTTRNPEGDPIETSYRVRGEKYETLRHAMKAARGDREGG
Ga0326728_100978922	3300033402	Peat Soil	MGQTLGIVTVIEGVQAIEVTAHSQDGDPVETSYGVGGEKYETLKQAMGATRAISGG
Ga0326728_101087233	3300033402	Peat Soil	MGQTSRIVTIIEGVEVIEVTTHDPEGEPIETRYQVRGEKYETLHEARRAAREISESG
Ga0326728_101598283	3300033402	Peat Soil	MVRTSRVLRIIEGVEVIEVTIHDPEGDPIETGYYVQGVKYETLRQAMGAASSVS
Ga0326728_106947971	3300033402	Peat Soil	MGQTSRIVTIIEGIEVIEVTIHDPQGDPIETRYHVRGEKYETLKQAMEAARRISEE
Ga0326727_102892062	3300033405	Peat Soil	MGQTSRIVTIVDGVEVMEVTVHDPEGNPLETSYHVRGERYETLRQAMEAAKGIGE
Ga0326727_105643552	3300033405	Peat Soil	MGQTSRIVTIIEGVQVIEVTTYDPEGDPIQTYYRVRGETYETLKQAMEAAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences