Metagenome / Metatranscriptome Family F100196

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Overview

Basic Information
Family ID	F100196
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	102 residues
Representative Sequence	MACPEFEDLVREGAGGHAARCEECRALLEALADVDATFEAAFAGVSAPPGLAAVVRARVARELPLRRPSPLPEILDFIGWAAVLALAAVLLPRFLPLINAALAGLG
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.00 %
% of genes near scaffold ends (potentially truncated)	27.45 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.216 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (19.608 % of family members)
Environment Ontology (ENVO)	Unclassified (44.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.70% β-sheet: 0.00% Coil/Unstructured: 40.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08281	Sigma70_r4_2	59.80
PF01209	Ubie_methyltran	1.96
PF15723	MqsR_toxin	1.96
PF15731	MqsA_antitoxin	1.96
PF01791	DeoC	0.98
PF02254	TrkA_N	0.98
PF10518	TAT_signal	0.98
PF02559	CarD_CdnL_TRCF	0.98
PF13378	MR_MLE_C	0.98
PF07963	N_methyl	0.98
PF13231	PMT_2	0.98
PF02617	ClpS	0.98
PF07676	PD40	0.98
PF05164	ZapA	0.98
PF13631	Cytochrom_B_N_2	0.98
PF12543	DUF3738	0.98
PF00654	Voltage_CLC	0.98
PF00266	Aminotran_5	0.98
PF13624	SurA_N_3	0.98
PF01966	HD	0.98
PF13489	Methyltransf_23	0.98
PF03551	PadR	0.98
PF05593	RHS_repeat	0.98
PF02926	THUMP	0.98
PF13470	PIN_3	0.98
PF03401	TctC	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.96
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.96
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.98
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.98
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.98
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.98
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG3027	Cell division protein ZapA, inhibits GTPase activity of FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.98
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.22 %
Unclassified	root	N/A	10.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.22 %
Unclassified	root	N/A	10.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.22 %
Unclassified	root	N/A	10.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.61 %
Unclassified	root	N/A	10.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.67 %
Unclassified	root	N/A	10.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	14.71 %
Unclassified	root	N/A	10.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	14.71 %
Unclassified	root	N/A	10.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	14.71 %
Unclassified	root	N/A	10.78 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	13.73 %
Unclassified	root	N/A	10.78 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10071035	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005538\|Ga0070731_10004277	All Organisms → cellular organisms → Bacteria	12376	Open in IMG/M
3300005538\|Ga0070731_10477969	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006059\|Ga0075017_100157598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300009549\|Ga0116137_1180553	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300009644\|Ga0116121_1118598	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300009700\|Ga0116217_10968346	Not Available	521	Open in IMG/M
3300009824\|Ga0116219_10662706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300009839\|Ga0116223_10617461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010379\|Ga0136449_100003845	All Organisms → cellular organisms → Bacteria	44981	Open in IMG/M
3300010379\|Ga0136449_101849929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012931\|Ga0153915_12504354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300012964\|Ga0153916_10530625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300014153\|Ga0181527_1149639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300014156\|Ga0181518_10288624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300014159\|Ga0181530_10312090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300014159\|Ga0181530_10552231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300014160\|Ga0181517_10009118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7967	Open in IMG/M
3300014160\|Ga0181517_10506917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300014164\|Ga0181532_10755751	Not Available	522	Open in IMG/M
3300014200\|Ga0181526_10326833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	976	Open in IMG/M
3300014200\|Ga0181526_10666104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300014490\|Ga0182010_10092166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300014490\|Ga0182010_10211808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	1019	Open in IMG/M
3300014491\|Ga0182014_10009473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9763	Open in IMG/M
3300014492\|Ga0182013_10124226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300014494\|Ga0182017_10105308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1846	Open in IMG/M
3300014494\|Ga0182017_10520582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300014494\|Ga0182017_10625591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300014496\|Ga0182011_10028400	All Organisms → cellular organisms → Bacteria → Acidobacteria	4035	Open in IMG/M
3300014496\|Ga0182011_10138547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1683	Open in IMG/M
3300014496\|Ga0182011_10523509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300014496\|Ga0182011_10912164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300014498\|Ga0182019_10139488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1526	Open in IMG/M
3300014502\|Ga0182021_10016946	All Organisms → cellular organisms → Bacteria	8648	Open in IMG/M
3300014502\|Ga0182021_10174801	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300014502\|Ga0182021_10297020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1902	Open in IMG/M
3300014502\|Ga0182021_10374552	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300014838\|Ga0182030_10676109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300014839\|Ga0182027_10005457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	19319	Open in IMG/M
3300014839\|Ga0182027_10089843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3724	Open in IMG/M
3300014839\|Ga0182027_11235880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300014839\|Ga0182027_11395628	Not Available	694	Open in IMG/M
3300017946\|Ga0187879_10113302	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300017970\|Ga0187783_10165358	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300017973\|Ga0187780_11462715	Not Available	504	Open in IMG/M
3300017975\|Ga0187782_11170431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300017988\|Ga0181520_10002415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	34698	Open in IMG/M
3300017988\|Ga0181520_10131090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2076	Open in IMG/M
3300017988\|Ga0181520_10708897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	687	Open in IMG/M
3300018002\|Ga0187868_1065538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300018003\|Ga0187876_1279903	Not Available	536	Open in IMG/M
3300018005\|Ga0187878_1200806	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300018033\|Ga0187867_10803169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018047\|Ga0187859_10760581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300018058\|Ga0187766_11026959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300018089\|Ga0187774_10856313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300018090\|Ga0187770_11219400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300019785\|Ga0182022_1089726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300019788\|Ga0182028_1500917	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300021858\|Ga0213852_1369868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300022593\|Ga0236338_1012760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2006	Open in IMG/M
3300023068\|Ga0224554_1027190	All Organisms → cellular organisms → Bacteria → Acidobacteria	1678	Open in IMG/M
3300023101\|Ga0224557_1127269	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300025579\|Ga0207927_1044735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300025725\|Ga0209638_1034168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2237	Open in IMG/M
3300025865\|Ga0209226_10293399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300027825\|Ga0209039_10000366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	44222	Open in IMG/M
3300027869\|Ga0209579_10006682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7600	Open in IMG/M
3300027900\|Ga0209253_10638009	Not Available	776	Open in IMG/M
3300027905\|Ga0209415_10186858	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300029952\|Ga0311346_11350820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300029954\|Ga0311331_10418814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300030613\|Ga0299915_10908830	Not Available	540	Open in IMG/M
3300031239\|Ga0265328_10159409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300031344\|Ga0265316_10015374	All Organisms → cellular organisms → Bacteria → Acidobacteria	6695	Open in IMG/M
3300031902\|Ga0302322_102314694	Not Available	661	Open in IMG/M
3300031999\|Ga0315274_10815060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300032046\|Ga0315289_10152695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2603	Open in IMG/M
3300032118\|Ga0315277_10000476	All Organisms → cellular organisms → Bacteria	63954	Open in IMG/M
3300032118\|Ga0315277_10363734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1498	Open in IMG/M
3300032160\|Ga0311301_10041694	All Organisms → cellular organisms → Bacteria	11029	Open in IMG/M
3300032160\|Ga0311301_10113328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5179	Open in IMG/M
3300032516\|Ga0315273_10450206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1730	Open in IMG/M
3300032770\|Ga0335085_10000015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	711356	Open in IMG/M
3300032783\|Ga0335079_12352222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032895\|Ga0335074_10714821	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300032898\|Ga0335072_10026296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8134	Open in IMG/M
3300033402\|Ga0326728_10009099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	24128	Open in IMG/M
3300033402\|Ga0326728_10216813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1890	Open in IMG/M
3300033402\|Ga0326728_10567517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300033480\|Ga0316620_10000089	All Organisms → cellular organisms → Bacteria	37110	Open in IMG/M
3300033480\|Ga0316620_10173860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1762	Open in IMG/M
3300033485\|Ga0316626_10161986	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300033486\|Ga0316624_11448116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300033513\|Ga0316628_102210861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300033887\|Ga0334790_199788	Not Available	574	Open in IMG/M
3300033891\|Ga0334811_051545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1105	Open in IMG/M
3300033982\|Ga0371487_0168866	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300033982\|Ga0371487_0262714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.73%
Aquatic	Environmental → Aquatic	34.31%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.96%
Freshwater	Environmental → Aquatic → Freshwater	33.33%
Peat	Environmental → Terrestrial → Peat	11.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	37.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.76%
Lake	Environmental → Aquatic → Freshwater → Lake	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	22.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	19.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.96%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.96%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100710352	3300003218	Bog Forest Soil	MACPEFEELLSQGGRDHAQHCEECRALLEALEDVDATFDAAFAGVAAPPGLEAAVRARVAREARLRAPSLVPEILDFIGWAAVLALTAILLPRVLPFLNAMLAQLS*
Ga0070731_100042776	3300005538	Surface Soil	MACPEFQDLLRDRADGHAAHCEHCRALLDAFADVDTAFETAFGDISAPPTLAPAVRARIAREIRIPRPSMLPEVLDFIGWAAVLALAALIVPHLLLSLGAVL*
Ga0070731_104779691	3300005538	Surface Soil	MACPSFEDLLREGAGGHAERCAECRRLLAAWNEVDATLEAGFGSVTAPPSLAAAVRAQVEREAPLRAPSLIPEILDFVGWAAVLGMAAILVPRYLPVLFR*
Ga0075017_1001575982	3300006059	Watersheds	MACPEFEDLLREGAGGHAAGCERCRALLEALADVDATFDAAFRGVTAPAGLAAAVRARVSREVPMPRLSLLPEVLDLIGWAAVLALVALLAPRFLPLLNAALARLG*
Ga0116137_11805531	3300009549	Peatland	CPEFEDLVREGAGGHAARCEDCRALLDALADVDAALESAFAGVSAPPGMPAAVRARVTRELSWRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDAALAGRG*
Ga0116121_11185982	3300009644	Peatland	MACPDFEELLRQGGQGHAQHCEECRALLEALAEVDATLETAFAGVAAPPGFEAAVRARVAREARFRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITATLAQLS*
Ga0116217_109683461	3300009700	Peatlands Soil	GIGAPAHPQRRVLMACPEFEELLRQGGRDHAQHCEECRALLEALEDVDATFDTAFAGVAAPPGLEAAVRARVAREARLRAPSLVPEILDFIGWAAVLALTAILLPRVLPFLNAMLAQLS*
Ga0116219_106627062	3300009824	Peatlands Soil	MACPEFEELLRQGGRDHAQHCEECRALLEALEDVDATFDTAFAGVAAPPGLEAAVRARVARETRLRPPSLVPEILDFIGWAAVLALAAILF
Ga0116223_106174611	3300009839	Peatlands Soil	MACPEFEELLRQGGRDHAQHCEECRALLEALEDVDATFDTAFAGVAAPPGLEAAVRARVAREARLRAPSLVPEILDFIGWAAVLALTAILLPRVLPFLNAMLAQLS*
Ga0136449_10000384540	3300010379	Peatlands Soil	SVMACPDFEELVRQGPGGHAARCEECGALLEALADVDRSLEAAFAGISAPPGLAASARLRIARESAGRGPSLLPEILDLIGWAAVLALVAVLAPRLLPLIDAALAKLS*
Ga0136449_1018499291	3300010379	Peatlands Soil	MMACPDFEKLVSGGAGDHAAHCEECRALLDAWADVDATFDAAFAGISAPPGLAAIVRARVAREIPVRRPSVLPEVLDFIGWAAVFALAAVLLPRFLPLIDAAI
Ga0153915_125043542	3300012931	Freshwater Wetlands	MACPELEDLLSDRSCEHAAHCEACRALLEELTCVEATLETAFAGITAPPGLEAAVRARIAEELPQRGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPIISAVLAGLG*
Ga0153916_105306253	3300012964	Freshwater Wetlands	MACPELEDLLSDRSCEHAAHCEACRALLEELTCVEATLETAFAGISAPPGLEAAVRARIAEELPRRGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPIISAVLAGLG*
Ga0181527_11496392	3300014153	Bog	MACPEFEELLSQDGRDHAQHCEECRALLEALKDVDATFEAAFAGVAAPPGLEAAVRARAARETRLRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITSMLAQLS*
Ga0181518_102886241	3300014156	Bog	MACPDFEDLAQGRAGDHTAHCEECRALLDALAEADATFDAAFAGISAPPSLAAAVRTRVAREFPVRRPSVLPEVLDFIGWAAVLALAAVLFPRFLPLLGAALSSLS*
Ga0181530_103120901	3300014159	Bog	MACPDFEELLRQGGQGHAQHCEECRALLEALLDVDATLEAAFAGVAAPPGFEAAVRARVAREARFRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITATLAQLS*
Ga0181530_105522311	3300014159	Bog	MACPEFEDLVREGAGGHAARCEECRALLDALADVDASFEAAFAGVSAPPGMAAAVRARVTRELSWRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDAALAGSG*
Ga0181517_100091185	3300014160	Bog	MACPDFEDLVRGGAGDHAAHCEECRALLDALADVDATFEAAFAGISAPPSLAAGVRARVAREFPVRRLSVLPEVLDFIGWAAVFALAAILLPRFLPLLNAAIASLS*
Ga0181517_105069172	3300014160	Bog	MTACPEFEDLVSGAAGDHAAHCEDCRALLDALADVDATFDAAFAETSAPPSLAAAVRMRVEREFAVRRPSLLPEVLDFIGWAAVLALAAVLLPRFLPLLNAAIASLS*
Ga0181532_107557511	3300014164	Bog	DGRDHAQHCEECRALLEALKDVDATFEAAFAGVAAPPGLEAAVRARAARETRLRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITSMLAQLS*
Ga0181526_103268331	3300014200	Bog	MACPEFEDLVREGAGGHAARCEECRALLDALADVDASFEAAFAGVSAPPGMAAAVRTRVARGLSWRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDAALAGSG*
Ga0181526_106661041	3300014200	Bog	MACPEFEELIRQGAGGHAAHCEGCRALLDALADVDGALESAFAGVSAPPGMADAVRARIGHEMPIRRPSILPEALDFIGWAAVLALAAFLLPHLLLRLGVLAG*
Ga0182010_100921662	3300014490	Fen	MACPEFEDLVREGAGGHAARCEECRALLDALADVDAAFEEAFAGVSAPPGMAAAVRARVARELSMRRPSPLPEILDFIGWAAVLALTVVLLPRFLPLIDVALAGLG*
Ga0182010_102118083	3300014490	Fen	MACPQFENLVREGAGGHATRCEECRALLDALADVDAAFEAAFADVSAPPDMAAAVRARVARELPLRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDMALAGLG*
Ga0182014_100094738	3300014491	Bog	MACPDFEDLVRGGAGDHAAHCEACRALLDALADVDATFDAAFAGISAPPSLAAEVRARVAREFPLRRPSLLPEVLDFIGWAAVFALAAILLPRFLPLLNAAIASLS*
Ga0182013_101242262	3300014492	Bog	MPCPDFEDLVNGRAGNHAAHCEDCRALLDAMADVDATLEAAFAGISAPPSLAAAVRARVARDFPMRRPSLVPELLDFIGWAAVLTLAAVLIPRFLPLINAAIASVS*
Ga0182017_101053083	3300014494	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFADISAPPGMAAAVRARVARELPLRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDVALAGLG*
Ga0182017_105205822	3300014494	Fen	MACPEFEDLVREGAGGHAARCEECRALLEALADVDATFEAAFAGVSAPPGLAAVVRARVARELPLRRPSPLPEILDFIGWAAVLALAAVLLPRFLPLINAALAGLG*
Ga0182017_106255911	3300014494	Fen	MACPELEDLVREGPSGHAARCEECRALPDALADVDAAFDAAFQGISAPPGLAAAARARIAGHIPPRRPSLLPEILDFIGWAAVLALAAVLLPRFL
Ga0182011_100284002	3300014496	Fen	MACPEFEDLVRDGSGGHAARCEDCRALLDALAEVDAALETAFAGVVAPPGLAAAVRARVAREFSLRRPSPLPEILDFIGWAAVLALAAVLLPHFLPLIDAALAGRG*
Ga0182011_101385473	3300014496	Fen	MACPEFEDLVREGAGGHAARCEDCRALLDALADVDAALESAFAGVSAPPGMPAAVRARVTRELSWRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDAALAGRG*
Ga0182011_105235092	3300014496	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFANVSAPPGMAAAVRARVARELPLRRPSPLPEILDFIGWAAVLALAAVLLPRFLPLIDAALAGRG*
Ga0182011_109121641	3300014496	Fen	MACPKLEDLVREGPSGHAAHCEECRALLGALADVDAAFDAAFQGISAPPGLAATARARIARQNPPCRPSLLPEILDFIGWA
Ga0182019_101394884	3300014498	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFADISAPPGMAAAVRARVARELRLRRPSPLPEILDFIGWAAVLALAAVLFPRVLPFFRAVVAG
Ga0182021_100169465	3300014502	Fen	MACLELEELLNEGSGGHAAHCEECRALLDALAHADATFDAAFSHVSAPQGLAANVRVRVVQLLPECNPSPVPELLDLIGWAAILVIAAVVVPRFATLLSSVLTGLG*
Ga0182021_101748013	3300014502	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFADVSAPPDMAAAVRARVARELPLRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDVALAGLG*
Ga0182021_102970203	3300014502	Fen	MACPEFEDLVREGAGGHAAHCERCRALLDALADVDAAFEAAFAGVSAPPGMAAIVRARAMRELPLRRPSMLPEILDLIGWAAVLALAAVLLPRFLPLIDAALAGRG*
Ga0182021_103745522	3300014502	Fen	CEDCRALLDALAEVDAALETAFAGVVAPPGLAAAVRARVAREFSLRRPSPLPEILDFIGWAAVLALAAVLLPHFLPLIDAALAGRG*
Ga0182030_106761091	3300014838	Bog	MMACPDFEDLAQGRAGDHAAHCEDCRALLDALADVDATFDAAFAGVAAPPSLAAAVRMRVEREFQVRRPTVLPEVLDFIGWAAVLALAAVLLPRFLPLIHDAIARLS*
Ga0182027_1000545716	3300014839	Fen	MMACPDFEDLVRGRAGDHATHCEECRALLDALVEVDATFDAAFAGISAPPSLAAAVRARVARQSAVRRPSLVPEVLDFIGWAAVLALAAILLPRCLPLLNAALARFS*
Ga0182027_100898435	3300014839	Fen	MACPDFEELVSGRAGDHAAHCEECRALLDALADVDATFEAAFAGISAPPSLAAEVRARVAREFPLRRPSLLPEVLDFIGWAAVFALAAILLPRFLPVLNAAIASLS*
Ga0182027_112358802	3300014839	Fen	MACLELEELLNEGSGGHAAHCEECRALLDALAHADATFDAAFSHVSAPQGLAANVRVRVVQLLPECNPSPVPELLDLIGWAAILVI
Ga0182027_113956282	3300014839	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAVFEAAFADVSAPPGMAAAVRARVTRELPLRGPSPLPEILDVVGWAAVLALAAVLLPRFLPLIDAALAGRG*
Ga0187879_101133022	3300017946	Peatland	MACPDFEELLRQGGQGHAQHCEECRALLEALLDVDATLEAAFAGVAAPPGFEAAVRARVAREARFRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITATLAQLS
Ga0187783_101653582	3300017970	Tropical Peatland	MACPEFEDLVRKGAGGHAAHCDDCRALLEALGDVDRTLEAAFAGINAPPSLRTAVDERIAREIRLQRPSIIPEVLDFIGWAAVLALAAALLPHLLLRLGGILST
Ga0187780_114627151	3300017973	Tropical Peatland	IREGSGGHAARCEKCRELLDAFTHVDATFDAAFAGISAPPGLEAAVRARVAWELPVRKPPVVPEILDFIGWAAVLAVAAILVPRFMPLFTSILAELR
Ga0187782_111704311	3300017975	Tropical Peatland	MACPEFEDLVREGASGHAAHCDDCRALLEALGDVDRTLEAAFAGITAPPDLKAAVDAHIARQIRLQRPSIIPEVLDFIGWAAVLALAAFLLPHLLLRLGGILSS
Ga0181520_1000241512	3300017988	Bog	MACPDFEDLVRGGAGDHAAHCEECRALLDALADVDATFEAAFAGISAPPSLAAGVRARVAREFPVRRLSVLPEVLDFIGWAAVFALAAILLPRFLPLLNAAIASLS
Ga0181520_101310902	3300017988	Bog	MACPDFEDLAQGRAGDHTAHCEECRALLDALAEADATFDAAFAGISAPPSLAAAVRTRVAREFPVRRPSVLPEVLDFIGWAAVLALAAVLFPRFLPLLGAALSSLS
Ga0181520_107088971	3300017988	Bog	HAAHCEDCRALLDALADVDATFDAAFAETSAPPSLAAAVRMRVEREFAVRRPSLLPEVLDFIGWAAVLALAAFLLPRFLPLLNAAIASLS
Ga0187868_10655383	3300018002	Peatland	MACPEFEELLSQDGRDHAQHCEECRALLEALKDVDATFEAAFAGVAAPPGLEAAVRARAARETRLRAPSLVPEILDFIGWAAVLALAAILFPRVLPFITSMLAQLS
Ga0187876_12799031	3300018003	Peatland	MACPEFEDLLRDGGDHAAHCEECRALLEALADVDATLDGALAGISAPPSLAAAVRARRTHEFPVRRPSVLPEVLDFIGWAAVLALAAVLVPRFLPILDAALARIS
Ga0187878_12008061	3300018005	Peatland	MMACPEFEDLLNGHAGNHAASCEECRALLDALADVDAALETAFAGITAPPGLARAVRARVSREVPLRAPSMMPEVLDFIGWAAVLALAVALWPRFLPLLEAALSWLS
Ga0187888_12595981	3300018008	Peatland	CRALLEALADVDATLDGALAGISAPPSLAAAVRARRTHEFPVRRPSVLPEVLDFIGWAAVLALAAVLVPRFLPILDAALARIS
Ga0187867_108031691	3300018033	Peatland	MACPEFEELLRSGGQGHAQHCEECRALLEAVADVDANLEAAFAGVVAPPGLEAAVRARVARETRVRPPSLVPEILDFIGWAAVLALAAILFP
Ga0187859_107605812	3300018047	Peatland	MPCPEFEELIRQGVSGHAAHCEDCRALLDALADVDSAFESAFADVTAPPGMAAAVRARIGYQIPIRRPSILPEALDFIGWAAVLALAAFLLPRLLLRLGVVLAG
Ga0187766_110269591	3300018058	Tropical Peatland	MGCPEFEDLIREGSGGHAARCEKCRELLDAFTHVDATFDAAFAGISAPPGLEAAVRARVAWELPVRKPPVVPEILDFIGWAAVLAVAAILVPRFMPLFTSILAELR
Ga0187774_108563131	3300018089	Tropical Peatland	MGCPELEDLLREGSGGHASRCEKCRALLDALAHVDATLDAAFAGISAPPGLATAVRARVARELPIHRPPLVPEILDFIGWAAVLIMVAIAVPRFLPLFSLLLAELG
Ga0187770_112194001	3300018090	Tropical Peatland	MGCPDLEDLLREGRGGHASECPQCRTLLDTLAHVDATLDAAFAGIFAPPSLAAAVHARIAQALPVRRPSLLPEILDSVG
Ga0182022_10897262	3300019785	Fen	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFADVSAPPDMAAAVRARVARELPLRPSPLPEILDFIGWAAVLALAVVLLPRFLP
Ga0182028_15009174	3300019788	Fen	MACPDFEELVSGRAGDHAAHCEECRALLDALADVDATFEAAFAGISAPPSLAAEVRARVAREFPLRRPSLLPEVLDFIGWAAVFALAAIL
Ga0213852_13698682	3300021858	Watersheds	MACPEFEDLLREGAGGHAAGCERCRALLEALADVDATFDAAFRGVTAPAGLAAAVRARVSREVPMPRLSLLPEVLDLIGWAAVLALVALLAPRFLPLLNAALARLG
Ga0236338_10127601	3300022593	Freshwater	MACPEFEDLVRGGGGDHAAHCEECRALLDALADVDATFDAAFAGISAPPSLAAAVRARMAREFSVRRTSLLPEVLDFIGWAAVLALAAILLPRFLPLLDAALARIS
Ga0224554_10271902	3300023068	Soil	MACPDFEDLVRGGAGDHAAHCEACRALLDALADVDATFDAAFAGISAPPSLAAEVRARVAREFPLRRPSLLPEVLDFIGWAAVFALAAILLPRFLPLLNAAIASLS
Ga0224557_11272691	3300023101	Soil	MACPDFEDLVRGGAGDHAAHCEACRALLDALADVDATFDAAFAGISAPPSLAAEVRARVAREFPLRRPSLLPEVLDFIGWAAVFALA
Ga0207927_10447351	3300025579	Arctic Peat Soil	MACPDFEDLVRDGAGDHAEHCEDCRALLDALADVDATFDAAFAGISAPPSLAAAVRARVAREFPVRRPSLLPEVLDFIGWAAVLA
Ga0209638_10341681	3300025725	Arctic Peat Soil	MACPDFEDLVRDGAGDHAEHCEDCRALLDALADVDATFDAAFGGISAPPSLAAAVRARVAREFPVRRPSLLPEVLDFIGWAAVLALAAVLLPRFLPLLDAALARLS
Ga0209226_102933991	3300025865	Arctic Peat Soil	MACPDFEDLVRDGAGDHAEHCEDCRALLDALADVDATFDAAFAGISAPPSLAAAVRARVAREFPVRRPSLLPEVLDFIGWAAVLALAAVLLPRFLPLLDAALARLS
Ga0209039_100003665	3300027825	Bog Forest Soil	MACPEFEELLSQGGRDHAQHCEECRALLEALEDVDATFDAAFAGVAAPPGLEAAVRARVAREARLRAPSLVPEILDFIGWAAVLALTAILLPRVLPFLNAMLAQLS
Ga0209579_100066824	3300027869	Surface Soil	MACPEFQDLLRDRADGHAAHCEHCRALLDAFADVDTAFETAFGDISAPPTLAPAVRARIAREIRIPRPSMLPEVLDFIGWAAVLALAALIVPHLLLSLGAVL
Ga0209253_106380091	3300027900	Freshwater Lake Sediment	MACPEWEELLSDRNRNHAAHCAACRALLDELAHVEATFETAFAGISAPPGLEAAVHARIARELPEFGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPIISA
Ga0209415_101868583	3300027905	Peatlands Soil	MACPDFEELVRQGPGGHAARCEECGALLEALADVDRSLEAAFAGISAPPGLAASARLRIARESAGRGPSLLPEILDLIGWAAVLALVAVLAPRLLPLIDAALAKLS
Ga0311346_113508202	3300029952	Bog	MPCPDFEDLVNGRAGNHAAHCEDCRALLDAMADVDATLEAAFAGISAPPSLAAAVRARVARDFPMRRPSLVPELLDFIGWAAVLTLAAVLIPRFLP
Ga0311331_104188143	3300029954	Bog	MPCPDFEDLVNGRAGNHAAHCEDCRALLDAMADVDATLEAAFAGISAPPSLAAAVRARVARDFPMRRPSLVPELLDFIGWAAVLTLAAVLIPRFLPLINAAIASVS
Ga0299915_109088302	3300030613	Soil	MACPEFDDLLREGAGGHAERCEECRALLDALARVEGIFDRAFTGIGAPPGMAAAVRARLMRECPVPRPSVIPEILDFIGWAAVLAVIAIVIPRFLPLISAMMAELG
Ga0265328_101594091	3300031239	Rhizosphere	MACPEFEELIAEGCNGHAAHCEECRALLEAFTEVDSKLDAAFAGIPAPSGLRADVQLRIARDTQLRRPSLLPEVLDFIGWAAVLAMAAILFPRLLPLITSIFTQST
Ga0265316_100153747	3300031344	Rhizosphere	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAVFEAAFADVSAPPGMAAAVRARVTRELPLREPSPLPEILDVVGWAAVLALAAVLLPRFLPLIDAALAGRG
Ga0302322_1023146941	3300031902	Fen	TRCEECRALLDALADVDAAFEAAFADVSAPPGLAAAVRARVARELPLRRPSPLPEILDFIGWAAVLALAAVLLPRFLPLIDVALAGRG
Ga0315274_108150603	3300031999	Sediment	MMACPEFEDLLNGRAGNHAASCEECRALLDALADVDAALETAFAGITAPPGLDAAVRARVSREVPLRAPSVMPEVLDFIGWAAVLALAVALWPRFLPLLEAALSWLS
Ga0315274_117286801	3300031999	Sediment	HCEECRALLEALDHVDTTFDAAFVDASAPPGLAAAVRARVARELPECEPSLVPELLDFIGWAAVLAMAAIVIPRFLPFIIGP
Ga0315289_101526954	3300032046	Sediment	MACPELEDLLHESSGDHAAHCEECRALLQALDHVDTTFDAAFVDASAPPGLAAAVRARVARELPECEPSLVPELLDFIGWAAVLAMAAIVIPRFLPFIIGP
Ga0315277_1000047647	3300032118	Sediment	MACPELEDLLHESSGDHAAHCEECRALLEALDHVDTTFDAAFVDASAPPGLAAAVRARVARELPECEPSLVPELLDFIGWAAVLAMAAIVIPRFLPFIIGP
Ga0315277_103637343	3300032118	Sediment	NGRAGNHAASCEECRALLDALADVDAALETAFAGITAPPGLDAAVRARVSREVPLRAPSVMPEVLDFIGWAAVLALAVALWPRFLPLLEAALSWLS
Ga0311301_100416949	3300032160	Peatlands Soil	MACPEFEELLRQGGRDHAQHCEECRALLEALEDVDATFDTAFAGVAAPPGLEAAVRARVAREARLRAPSLVPEILDFIGWAAVLALTAILLPRVLPFLNAMLAQLS
Ga0311301_101133281	3300032160	Peatlands Soil	EFEELVRDGGDHAAHCEECRALLEALADVDATFDAAFAGISAPPSLAAAVRARTAREFPVWRPSLLPEVLDFIGWAAVLALAAILLPRFLPLLDAALAKIS
Ga0315273_104502062	3300032516	Sediment	MACPELEDLLSDRSGDHVAHCEACRALLDELTHVEATFETAFAGISAPPGLEAAVRARIARELAERGPSLVPEFLDFIGWAAVLAVAAIVAPRFLPLISAVPAGLG
Ga0335085_10000015204	3300032770	Soil	MACPDFEELIRQGPAGHAAHCDDCRGRLEAWTEIDGAFTSAFADVSAPAGMAAAVRARVAREVPLRPPSILPEALDFIGWAAVLALAAVLLPQLLLRLGIVLIR
Ga0335079_123522221	3300032783	Soil	MACPEFEDLVRDGAGHAAHCEECRALLDALTDVDATLDAAFAGISAPPGLASAVRARAAREFPVRRPSLLPEVLDFIGWAAVLALAAIVLPRFLPLLDAALAKIS
Ga0335074_107148212	3300032895	Soil	MACPDFDELIRQGPNGHAAHCDECRALWDAWTEVDEAFESAYAGVAAPPKMAPAVRARITRELVIRRPSILPEALDLIGWAAVLALIAIMLPHLLLRFGAALAGAG
Ga0335072_100262963	3300032898	Soil	MACPDFDELIRQGPNGHAGHCDECRALWDAWTEVDEAFESAFAGVAAPPKMAPAVRARIARELGIRRPSILPEALDLIGWAAVLALLAIMLPHLLLRFGAALAGAG
Ga0326728_1000909912	3300033402	Peat Soil	MACPEFEDLVREGAKGHAARCEECRALLDALADVDAALETAFADVSAPPGMAAAVRARVVRELPLRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDAALAGRG
Ga0326728_102168132	3300033402	Peat Soil	MACPEFEDLVREGAGGHAARCEDCRALLDALADVDCAFEAAFTGVSAPPGMAAAVRARVAREFTLRRPSPLPEILDFIGWAAVLALAAVLLPRFLPLIDAALAGRG
Ga0326728_105675172	3300033402	Peat Soil	MSCPDFEDLAHGRAGDHAAHCEECRALLDALADVDATFDAAFAGISAPPSLAAAVRIRVAREFPVRRPSLLPEVLDFIGWAAVLALAAVLLPRFLPLLNAALASLS
Ga0316620_100000898	3300033480	Soil	MACPEFADLLNDRNRDHIRQCEACRALLDELSHLEASFETAFAGISAPPGLETAVRARIAREVPERAPSLIPEFLDFLGWAAVLAVVAFVVPRLFPFISAVLAGLG
Ga0316620_101738602	3300033480	Soil	MACPELEDLLSDRSCEHAAHCEACRALLEELTCVEATLETAFAGISAPPGLEAAVRARIAEELPRRGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPIISAVLAGLG
Ga0316626_101619862	3300033485	Soil	MMACPEWEDLLSDRGRDHAAQCEACRALLDELTHVEATFETAFAGISAPPGLEAAVRARIASELPEREPSLVPEFLDFIGWAAVLAVAAIVVPRFLPLISAVLAGLD
Ga0316624_114481162	3300033486	Soil	PRKEELGRGLGLRARPERGSIMACPELEDLLSDRSCEHAAHCEACRALLEELTCVEATLETAFAGITAPPGLEAAVRARIAEELPQRGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPVISAVLAGLG
Ga0316628_1022108612	3300033513	Soil	MACPELEDLLSDRSCEHAAHCEACRALLEELTCVEATLETAFAGITAPPGLEAAVRARIAEELPQRGPSLVPEFLDFIGWAAVLAVAAIVVPRFLPIISAVLAGLG
Ga0334790_199788_40_363	3300033887	Soil	MMACPDFEDLVSGGAGDHAAHCEECCALLDAWAHVDTTLDAAFAGVSAPPSLAALVRACVRREVSVRRPSVVPEVLDFIGWAAVFALAAVLLPRFLPLLDAAIASLS
Ga0334811_051545_599_919	3300033891	Soil	MACPEFEDLVREGAGGHATRCEECRALLDALADVDAAFEAAFADISAPPGMAAAVRARVARELPLRRPSPLPEILDFIGWAAVLALAVVLLPRFLPLIDVALAGLG
Ga0371487_0168866_125_445	3300033982	Peat Soil	MACPELEDLVSGRAGDHAAHCEQCRALLEAWNDVDATLGAAFTGICAPPSVAAGVRRRAASEARMRRPSILPEVLDLIGWAAVLALVAVLAPRFVPAIQAAIASFS
Ga0371487_0262714_530_793	3300033982	Peat Soil	MACPEFEDLVREGAKGHAARCEECRALLDALADVDAALETAFADVSAPPGMAAAVRARVVRELPLRRPSPLPEILDFIGWAAVLALAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100196

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences