Metagenome / Metatranscriptome Family F100178

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100178
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	68 residues
Representative Sequence	MNRLRAADDFATIRARMEELRREREAAHATEGELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGMVRS
Number of Associated Samples	54
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.13 %
% of genes near scaffold ends (potentially truncated)	32.35 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.804 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (60.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.451 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04828	GFA	1.96
PF01230	HIT	1.96
PF01738	DLH	1.96
PF13191	AAA_16	0.98
PF04964	Flp_Fap	0.98
PF01165	Ribosomal_S21	0.98
PF00392	GntR	0.98
PF17195	DUF5132	0.98
PF13560	HTH_31	0.98
PF14367	DUF4411	0.98
PF07769	PsiF_repeat	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.96
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.98
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
All Organisms	root	All Organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
cellular organisms	root	All Organisms → cellular organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10414266	Not Available	762	Open in IMG/M
3300005332\|Ga0066388_101692681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1119	Open in IMG/M
3300005332\|Ga0066388_101884643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300005332\|Ga0066388_106862517	Not Available	573	Open in IMG/M
3300005363\|Ga0008090_15653527	Not Available	785	Open in IMG/M
3300005363\|Ga0008090_15835876	Not Available	519	Open in IMG/M
3300005436\|Ga0070713_101133386	Not Available	756	Open in IMG/M
3300005764\|Ga0066903_100247332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2745	Open in IMG/M
3300005764\|Ga0066903_100558265	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300005764\|Ga0066903_101239344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300005764\|Ga0066903_101955989	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300005764\|Ga0066903_102877584	Not Available	933	Open in IMG/M
3300005764\|Ga0066903_104376185	Not Available	754	Open in IMG/M
3300005764\|Ga0066903_108206029	Not Available	534	Open in IMG/M
3300009792\|Ga0126374_10325724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1042	Open in IMG/M
3300010046\|Ga0126384_10370082	Not Available	1201	Open in IMG/M
3300010046\|Ga0126384_12089155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300010048\|Ga0126373_10191252	Not Available	1977	Open in IMG/M
3300010048\|Ga0126373_10486417	Not Available	1274	Open in IMG/M
3300010048\|Ga0126373_10494129	Not Available	1265	Open in IMG/M
3300010048\|Ga0126373_11626822	Not Available	710	Open in IMG/M
3300010359\|Ga0126376_10382374	Not Available	1261	Open in IMG/M
3300010361\|Ga0126378_10072779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3298	Open in IMG/M
3300010361\|Ga0126378_10095567	Not Available	2919	Open in IMG/M
3300010361\|Ga0126378_11335640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300010361\|Ga0126378_12506516	Not Available	589	Open in IMG/M
3300010361\|Ga0126378_12525841	Not Available	587	Open in IMG/M
3300010362\|Ga0126377_12815581	Not Available	561	Open in IMG/M
3300010366\|Ga0126379_10655775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300010366\|Ga0126379_11353265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300010366\|Ga0126379_11397013	Not Available	806	Open in IMG/M
3300010366\|Ga0126379_12368053	Not Available	631	Open in IMG/M
3300010376\|Ga0126381_100048249	All Organisms → cellular organisms → Bacteria → Proteobacteria	5197	Open in IMG/M
3300010376\|Ga0126381_100320063	Not Available	2132	Open in IMG/M
3300010376\|Ga0126381_100532044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1663	Open in IMG/M
3300010376\|Ga0126381_100948986	Not Available	1240	Open in IMG/M
3300010376\|Ga0126381_100990431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1212	Open in IMG/M
3300010376\|Ga0126381_101748926	Not Available	898	Open in IMG/M
3300010376\|Ga0126381_104301917	Not Available	551	Open in IMG/M
3300010398\|Ga0126383_11551182	Not Available	752	Open in IMG/M
3300012948\|Ga0126375_10659987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300012971\|Ga0126369_12854174	Not Available	566	Open in IMG/M
3300012971\|Ga0126369_12983404	Not Available	554	Open in IMG/M
3300016270\|Ga0182036_10451894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1010	Open in IMG/M
3300016294\|Ga0182041_10587294	Not Available	977	Open in IMG/M
3300016294\|Ga0182041_11017352	Not Available	750	Open in IMG/M
3300016319\|Ga0182033_10749303	Not Available	858	Open in IMG/M
3300016341\|Ga0182035_10680970	Not Available	894	Open in IMG/M
3300016341\|Ga0182035_10839411	Not Available	808	Open in IMG/M
3300016371\|Ga0182034_10173064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1645	Open in IMG/M
3300016404\|Ga0182037_10140694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1804	Open in IMG/M
3300016422\|Ga0182039_11643972	Not Available	587	Open in IMG/M
3300016445\|Ga0182038_10327237	Not Available	1262	Open in IMG/M
3300020580\|Ga0210403_10067895	All Organisms → cellular organisms → Bacteria → Proteobacteria	2863	Open in IMG/M
3300020581\|Ga0210399_10139745	Not Available	1998	Open in IMG/M
3300021168\|Ga0210406_11145092	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300021560\|Ga0126371_10029262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5141	Open in IMG/M
3300021560\|Ga0126371_10083355	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300021560\|Ga0126371_10131502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2542	Open in IMG/M
3300021560\|Ga0126371_10353906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1604	Open in IMG/M
3300021560\|Ga0126371_10437479	Not Available	1453	Open in IMG/M
3300021560\|Ga0126371_11068413	Not Available	947	Open in IMG/M
3300021560\|Ga0126371_11436348	Not Available	820	Open in IMG/M
3300021560\|Ga0126371_11897899	Not Available	715	Open in IMG/M
3300021560\|Ga0126371_12045459	Not Available	689	Open in IMG/M
3300021560\|Ga0126371_13483456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300021560\|Ga0126371_13523197	Not Available	528	Open in IMG/M
3300021560\|Ga0126371_13778133	Not Available	510	Open in IMG/M
3300021560\|Ga0126371_13827797	Not Available	507	Open in IMG/M
3300026555\|Ga0179593_1168446	Not Available	1866	Open in IMG/M
3300026557\|Ga0179587_10822248	Not Available	613	Open in IMG/M
3300028906\|Ga0308309_10033607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3545	Open in IMG/M
3300031543\|Ga0318516_10034479	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300031546\|Ga0318538_10422656	Not Available	721	Open in IMG/M
3300031573\|Ga0310915_10054234	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300031573\|Ga0310915_10400306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	975	Open in IMG/M
3300031719\|Ga0306917_10377422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300031719\|Ga0306917_10786519	Not Available	746	Open in IMG/M
3300031744\|Ga0306918_10217464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1447	Open in IMG/M
3300031744\|Ga0306918_10422450	Not Available	1040	Open in IMG/M
3300031744\|Ga0306918_11364952	Not Available	544	Open in IMG/M
3300031747\|Ga0318502_10637481	Not Available	643	Open in IMG/M
3300031753\|Ga0307477_10009452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6724	Open in IMG/M
3300031763\|Ga0318537_10063837	Not Available	1346	Open in IMG/M
3300031771\|Ga0318546_10445758	Not Available	906	Open in IMG/M
3300031771\|Ga0318546_10545308	Not Available	815	Open in IMG/M
3300031798\|Ga0318523_10467663	Not Available	625	Open in IMG/M
3300031835\|Ga0318517_10011263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3211	Open in IMG/M
3300031879\|Ga0306919_10022240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3861	Open in IMG/M
3300031896\|Ga0318551_10157033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1244	Open in IMG/M
3300031945\|Ga0310913_10786185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031946\|Ga0310910_10916914	Not Available	687	Open in IMG/M
3300031954\|Ga0306926_10041618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5455	Open in IMG/M
3300031962\|Ga0307479_12100122	Not Available	513	Open in IMG/M
3300032055\|Ga0318575_10515489	Not Available	607	Open in IMG/M
3300032059\|Ga0318533_11297925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300032065\|Ga0318513_10386062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300032090\|Ga0318518_10449251	Not Available	660	Open in IMG/M
3300032091\|Ga0318577_10332042	Not Available	727	Open in IMG/M
3300032261\|Ga0306920_101639780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300032261\|Ga0306920_103232177	Not Available	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.25%
Loam	Environmental → Terrestrial → Soil → Loam	12.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	41.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_104142662	3300004633	Tropical Forest Soil	VSRPRAADDFAAIRARMEELRRERQAAQAPEGKLQPDAKMRAARNAYWSHGETSAGSGRVSQSGPIRS*
Ga0066388_1016926811	3300005332	Tropical Forest Soil	MTRPRAADDFATIRARMEELRREREAVHAGGSELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGSIRS*
Ga0066388_1018846431	3300005332	Tropical Forest Soil	MGGNMNRPRAADDFATIRLRLEELRREREAVYATESEPDQSVGPARNGYWSQREISDTPGRVRPSGPLRS*
Ga0066388_1068625171	3300005332	Tropical Forest Soil	MSRPRAADDFAAIRARLEELRSEREAAELGKADPQSDPPMRSTQDAHWPQRVISAGPGRVRQSGPIRS*
Ga0008090_156535272	3300005363	Tropical Rainforest Soil	VNRPRAADDFATIRARMKELRRERERAEAPESGLQSEPPVRPARIGYWSEREISAGPGRVRQSGPIRS*
Ga0008090_158358762	3300005363	Tropical Rainforest Soil	MNMGGNAVKRPRAADDFATIKARMEELRRERERAQAPESGLQSEPPLRSARIGYWSQREISGGPGRVRQSGPIRS*
Ga0070713_1011333861	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RARMEELRREREAAQATEGELQSDRPMRSNRNAYWSQREISPAPGQVRQSGAIRSA*
Ga0066903_1002473321	3300005764	Tropical Forest Soil	MNRPRAADDFATIRARMEELGREREGAHATEGELQSERPMRSNRNAYWSQQEISAGQGRVRQSGSIRS*
Ga0066903_1005582655	3300005764	Tropical Forest Soil	MNRPRAADDFVTIRARMEELCREREAAHAGESEAKSDPSMRSNRNADWLRAISTAPGQLRRSGPICS
Ga0066903_1012393442	3300005764	Tropical Forest Soil	MNRLRAADDFATIRARMEELRREREAAHATEGELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGMVRS*
Ga0066903_1019559892	3300005764	Tropical Forest Soil	MNRPRAADDFATIRLRLEELRREREAVYATESEPDQSVGPARNGYWSQREISDTPGRVRPSGPLRS*
Ga0066903_1028775842	3300005764	Tropical Forest Soil	VNRPRAADDFAAIKARMKELRRERERAQAPESGLQSEPSARSSRIGYWSQREISAEPGRVRQSGPIRS*
Ga0066903_1043761853	3300005764	Tropical Forest Soil	MKRPRAADDFAAIRTRLEELRREREAAHATESEVQPNPTMRSNRNADWWQREISAERVRIRQSGTVRS*
Ga0066903_1082060291	3300005764	Tropical Forest Soil	MNRPRAADDFAAIRTRLEELRREREAAQATESEVQPNPAMRSNRNADWWQREISAERERIRQSGTVRS*
Ga0126374_103257243	3300009792	Tropical Forest Soil	MTQPRAADDFATIRARMEELRREREAAHQTESETKSDPPTRSNRNGYWSQQEISAGSGRVRQSGPVRS*
Ga0126384_103700821	3300010046	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREAVHATESEVQSDRPMRSNRNADWWQREISAERGRVRQSGTVRS*
Ga0126384_120891552	3300010046	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREGVHGSESEAKSDPPLRTYRNGYWSQQEINAGPERVRQPGRVRS*
Ga0126373_101912522	3300010048	Tropical Forest Soil	VNRPRVADDFATIRARMEELRRERERAQAPESGLQSEPPVRPARIGYWSQREISRAPGQVRQPGPIRSLD*
Ga0126373_104864172	3300010048	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREGVHGSESEAKSDPPLRTYRNGYWSQQEINAGPGRVRQSGPIRS*
Ga0126373_104941292	3300010048	Tropical Forest Soil	MSRPRAADDFATVRARMEELRREREAAQATESEVQPNPTMRSNRNADWWQREISAERVRIRQSGTVRS*
Ga0126373_116268221	3300010048	Tropical Forest Soil	MTRSWAADDFAAIRARMKELRYEREHAEAAEIELQSDPSRRPDRIGYWSQREISAGPRQVRQPGPIRS*
Ga0126376_103823741	3300010359	Tropical Forest Soil	VSRPRAADDFAAIRARMEELRREREAVHATESEVQPNPAMRSNRNADWWQREISAERGRIRQSGTVRS*
Ga0126378_100727791	3300010361	Tropical Forest Soil	MNRPRAADDFAAIRARMEELRREREAVHATESEVQPNPAMRSNRNADWWQREISAERGRIRQSGT
Ga0126378_100955673	3300010361	Tropical Forest Soil	MNRPRAAEDFATIRARMEELRRERATAHAMEGELQSDRPMRSNRNADWWQREISAERGRVRQSGTVRS*
Ga0126378_113356401	3300010361	Tropical Forest Soil	MTQSRAADDFATIRARMEELRREREAADVTEGEAKSDLPTRSNRNTYWSQQGITAVLGRVRQS
Ga0126378_125065161	3300010361	Tropical Forest Soil	VYWPRAADDFATIRARMEELRRERERAQAPESGLQSEPLLRPARIGYWSQREISAGPGRVRQSGPI
Ga0126378_125258411	3300010361	Tropical Forest Soil	MNRPRAADDFAAIRTRLEELRREREAAQATESEVQPNPTMRSNRNADWWQREISAERVRIRQSGTVRS*
Ga0126377_128155811	3300010362	Tropical Forest Soil	DDFATIKARMVELRHRPRAADDFATIRARMKELRRERERAQAPERGLQSEPPLRPARIGYWSQREISAGPGRVRQSGPIRS*
Ga0126379_106557751	3300010366	Tropical Forest Soil	MTQSRAADDFATIRARMEELRREREAADVTEGEAKSDLPTRSNRNTYWSQQGITAVLGRVRQSGPIRS*
Ga0126379_113532651	3300010366	Tropical Forest Soil	MTRPRAADDFATIRARREELRREREAVHAGGSELQSDPPMRSNRNAYWSQQEISAGQG
Ga0126379_113970132	3300010366	Tropical Forest Soil	MSRPRAADDFATIRARMEELRREREAVHTTESEVQPNPAMRSNRNADWWQREISAERERIRQSGTVRS*
Ga0126379_123680531	3300010366	Tropical Forest Soil	VNRPRAADDFAAIRARMKELRRERERAQAAESRLQSEPPLRPARIGYWSQREISAEPGRVRQSGPIRS*
Ga0126381_1000482491	3300010376	Tropical Forest Soil	MNRPRAADDFAAIRARMEELRREREAVHATESEVQPNPAMRSNRNADWWQREISAERGRIRQSGTVRS*
Ga0126381_1003200631	3300010376	Tropical Forest Soil	RMVELRHRPRAADDFATIRARMKELRRERERAQAPESSLQSEPSARSSRIGYWSQREISAGPGRDRQSGPIRS*
Ga0126381_1005320443	3300010376	Tropical Forest Soil	MLRHQNSTKAKGGDTVNRPRAADDFETIRARMEELRREREAERASGSEAKSDPPMRSNRNGYWSQQQISAGPGRARQSG*
Ga0126381_1009489862	3300010376	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREAVHGSESEAKSDPPRRSYRNGYWSQQERVRQSGPIRS*
Ga0126381_1009904312	3300010376	Tropical Forest Soil	MTRPWAADDFATIRARMKELRYERERAEAAEIELQSDPPMRPARIGYWSQREINAGPGQVRRSGPIRSLD*
Ga0126381_1017489262	3300010376	Tropical Forest Soil	VNQPRAADDFATIRARIEELRREREAVHAAESEAKSDPPMRTYRNGYWAQREISAGPGRVRRSG*
Ga0126381_1043019171	3300010376	Tropical Forest Soil	RPRAADDFAAIRARMKELRRERERAQAAESRLQSEPPLRPARIGYWSQREISAEPGRVRQSGPIRS*
Ga0126383_115511821	3300010398	Tropical Forest Soil	RAADDFATIRARMEELRREREAVHATESEVQPNPTMRSNRNADWWQREISAERVRIRQSGTVRS*
Ga0126375_106599872	3300012948	Tropical Forest Soil	VDRARAADDFATIKARMVELRHRPRAADDFATIRARMDELRRERERAQAPESGLQSEPPLRPARIGYWSQREISAGPGRVRQSGPIRS*
Ga0126369_128541742	3300012971	Tropical Forest Soil	MNRPRTADDFATTPPRMQELRREPEAMQHAGESEAKSDPPMRSSRNADWLQRAINTAPGQVRQSRS*
Ga0126369_129834041	3300012971	Tropical Forest Soil	RMGGNMNRLRAADDFATIRARMEELRREREAAHATEGELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGMVRS*
Ga0182036_104518943	3300016270	Soil	MTQPRVADDFAMIRARMEELRREREAADATESEAKSDAPTRSNRNAYWSQHDTDAVPERVRPPG
Ga0182041_105872942	3300016294	Soil	VNRPRAADDFGTIRARMEELRREREAANVTETELQSNPPMHSNRNAHWSQQEINAELRRV
Ga0182041_110173522	3300016294	Soil	MTQSRVADDFALIRARMEELHREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPERVRPPGNIRS
Ga0182033_107493031	3300016319	Soil	VNRTRAADDFATIRARMEELRREREAANVTETELQSNPPMRSNRNAHWSQQEINAELRRVWQSGPIRS
Ga0182035_106809702	3300016341	Soil	VNRPRAADDFGTIRARIEELRREREAANVTETELQSNPPMRSNRNAHWSQQEINAELRRVWQSGPIRS
Ga0182035_108394111	3300016341	Soil	MTQSRVADDFALIRARMEELRREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRSPGNIRS
Ga0182034_101730642	3300016371	Soil	MNRPRAADDFAAIRARMEELRREREPEHVLEAEAKSDPPMRPHRNGYWSQQEISAGSGRVRPSGPTRS
Ga0182037_101406941	3300016404	Soil	VNRPRAADDFATIRARMEELRRERERPHALEGEAKSDPPMRPHRNGYWSQQEISAGSGRVRPSGPT
Ga0182039_116439721	3300016422	Soil	MNQPRAADDFATIRARMEELRREREAAQATEGEAKSDPPMRFNRNRYWSNQEMSAGSGRVRQSG
Ga0182038_103272371	3300016445	Soil	MTQPRVADDFAMIRARMEELRREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRPPGNIRS
Ga0210403_100678951	3300020580	Soil	MTRARAADDFATIRARMEELRRERKAAYATEPEGQSDPAMRPARNAYWSQREIGAEPGRVRQSGLGRG
Ga0210403_112795042	3300020580	Soil	MGGADVNRPRAADDFATIRARMEELRREVEREEAGQTEARSDPPLRPRRSAYWLDGEVGAGPNGD
Ga0210399_101397452	3300020581	Soil	MTRPRAADDFATIRARMEELRRERDGTHATEREGQADPAMRPARNAYWSQREISAGPGRVRQSGLGRG
Ga0210406_111450922	3300021168	Soil	MTRARAADDFATIRARMEELRRERKAAYATEPEGQSDPAMRPARNAYWSQREISVGPGRVRRSGPTGG
Ga0126371_100292624	3300021560	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREAVHATESEVQSDRPMRSNRNADWWQREISAERGRVRQSGTVRS
Ga0126371_100833556	3300021560	Tropical Forest Soil	MNRPRAADDFATIRLRLEELRREREAVYATESEPDQSVGPARNGYWSQREISDTPGRVRPSGPLRS
Ga0126371_101315022	3300021560	Tropical Forest Soil	MNRPRAADDFATIRARMEELRREREGVHGSESEAKSDPPLRTYRNGYWSQQEINAGPGRVRQSGPIRS
Ga0126371_103539062	3300021560	Tropical Forest Soil	MLRHQNSTKAKGGDTVNRPRAADDFETIRARMEELRREREAEQASGSEAKSDPPMRSNRNGYWSQQQISAGPGRARQSG
Ga0126371_104374793	3300021560	Tropical Forest Soil	VNRPRAADDFATIRARMEELRRERERAQAPESGLQSEPLLRPARIGYWSQREISAGPGRVRQSGPIRS
Ga0126371_110684131	3300021560	Tropical Forest Soil	MNRLRAADDFATIRARMEELRREREAAHATEGELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGMVRS
Ga0126371_114363482	3300021560	Tropical Forest Soil	MTRPRAADDFAAIRARMKELRYERERAEAAEIELQSDPPMRPARIGYWSQREINAGPGQVRRSGPIRSLD
Ga0126371_118978992	3300021560	Tropical Forest Soil	MNRPRAADDFAAIRARMEELRREREAVHATESEVQPNPAMRSNRNADWWQREISAERGRIRQSGTVRS
Ga0126371_120454591	3300021560	Tropical Forest Soil	MTRPRAADDFATIRARREELRREREAVHAGGSELQSDPPMRSNRNAYWSQQEISAGQGRVRQSGSIRS
Ga0126371_134834561	3300021560	Tropical Forest Soil	VNRPRAADDFATIKARMEELRHPRRAADDFAAIRARMEELRRERERAQATKSGLQSEPPLRPARIGYWSQREISAGPGRVRQS
Ga0126371_135231971	3300021560	Tropical Forest Soil	VNRPRAADDFAAIKARMKELRRERERAQAPESGLQSEPSARSSRIGYWSQREISAEPGRVRQSGPIRS
Ga0126371_137781332	3300021560	Tropical Forest Soil	MTQSRVADDFALIRARMEELRREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRPPGNIRS
Ga0126371_138277971	3300021560	Tropical Forest Soil	MSRPRAADDFATIRARMEELRREREAVHTTESEVQPNPAMRSNRNADWWQREISAERERIRQSGTVR
Ga0179593_11684462	3300026555	Vadose Zone Soil	MSRPRAADDFATIRTRMEELRREREAAYATEREGQSDPAMRPARNAYWSQREIGAGVGRVRQIGAIRS
Ga0179587_108222482	3300026557	Vadose Zone Soil	MSRPRAADDFATIRTRMEELRREREAAYATEREGQSDPAMRPARNAYWSQREIGAGV
Ga0308309_100336076	3300028906	Soil	MGGNVTRPRAADDFATIRARLEELRREREAVHATESELDQPGRSPRNQYWSQREISAGPGRVRSSGPTGG
Ga0318516_100344792	3300031543	Soil	VTRPRAADDFATIRARLEEMRREREVMHATEGELDQPERPTRTPYWPPQREISAGPGRVRSSGPIRS
Ga0318538_104226561	3300031546	Soil	MNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPG
Ga0310915_100542343	3300031573	Soil	MNRPRAADDFATIRARMEELRRAQEAAHPTEGELQSDRTERYARNAHSSQREVRPVPGWVRQSGPIRS
Ga0310915_104003062	3300031573	Soil	MNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPGRVRQSGPIRG
Ga0306917_103774222	3300031719	Soil	MTQSRVADDFALIRARMEELRREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPERVRPPGNIRS
Ga0306917_107865191	3300031719	Soil	VNRPRAADDFGTIRARMEELRREREAANVTETELQSNPPMRSNRNAHWSQQEINAELRRVWQSGPIRS
Ga0306918_102174643	3300031744	Soil	MTQSRVADDFALIRARMEELHREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRPPGNIRS
Ga0306918_104224501	3300031744	Soil	MNRPRAADDFAAIRARMEELRREREPEHALEAEAKSDPPMRPHRNGYWSQQEISAGSGRVRPSGPTRS
Ga0306918_113649521	3300031744	Soil	MNRPRAADDFVTIRARMKELRREREARQDPESETQSDPPMRSNRNAEWLQREINAALGRVGQSGPLRS
Ga0318502_106374811	3300031747	Soil	PRAIEHHQNSTKGMGGNVTKPRAADDFATIRARLEELRREREAVYASESETKPDPPMRPNRNGYWSQREISAGPGWLRSPGPTGS
Ga0307477_1000945210	3300031753	Hardwood Forest Soil	MNRPRAADDFATIRARMEELRREREAVHAAESEAKSDAPMRSNRNAYWSQREIGAAPGQVRQSGPIRS
Ga0318537_100638371	3300031763	Soil	VTKPRAADDFATIRARLEELRREREAVYASESETKPDPPMRPNRNGYWSQREISAGPGWLRSP
Ga0318546_104457581	3300031771	Soil	MNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPGRVRQSG
Ga0318546_105453081	3300031771	Soil	MNRPRAADDFAAIRARMEDLRREREPEHALEAEAKSDPPMRPHRNGYWSQQEISAGSGRV
Ga0318523_104676632	3300031798	Soil	VTKPRAADDFATIRARLEELRREREAVYASESETKPDPPMRPNRNGYWSQREISAGPG
Ga0318517_100112631	3300031835	Soil	MGRKAINQPRAADDFATIRIRMEELRREREAAQATEGELQSDRPMRSNRNAYWSQQEISAEQGRGRQAGPIR
Ga0306919_100222405	3300031879	Soil	VTKPRAADDFATIRARLEELRREREAVYASESETKPDPPMRPNRNGYWSQREISAGPGWLRSPGPTGS
Ga0318551_101570331	3300031896	Soil	MTQSRVADDFALIRARMEELRREREAAHATESETKSDAPTRSNRNAYWSQHGIGAVPERVRPPGNIRS
Ga0310913_107861852	3300031945	Soil	MTQPRVADDFAMIRARMEELRREREAADATESEAKSDAPTRSNRNAYWSQHEIGAVPERVRPPGNIRS
Ga0310910_109169142	3300031946	Soil	VNRPRAADDFATIRARMEELRRERERPHALEGEAKSDPPMRPHRNGYWSQQEISAGSGRVRPS
Ga0306926_100416187	3300031954	Soil	MNRPRAADDFAAIRARMEELRREREPEHALEAEAKSDPPMRPHRNGYWSQQEISAGSGRVRTPGPIRS
Ga0307479_121001221	3300031962	Hardwood Forest Soil	ATIRARMEELRREQEAAHATEGELQSDQSGRYARTAHSSQREVGAGPGRVRQSGPQLGREEVS
Ga0318575_105154891	3300032055	Soil	MNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPGRVRQ
Ga0318533_112979251	3300032059	Soil	MTQPRVADDFAMIRARMEELRREREAADATESEAKSDAPTRSNRNAYWSQHGIGAVPERVRPPGNIRS
Ga0318513_103860621	3300032065	Soil	MTQSRVADDFALIRARMEELRREREAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRSPGNI
Ga0318518_104492511	3300032090	Soil	GIERHQNPTKRMGGNMNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPGRVRQSGPIRG
Ga0318577_103320422	3300032091	Soil	MNRPRAADDFAIIRARIEELRREREAAQAAESDFQSDLPMRSNRNAYWPQREVSAGPGRVRQSGPIR
Ga0306920_1016397802	3300032261	Soil	MTQSRVADDFALIRARMEELRRERQAAHATESETKSDAPTGSNRNAYWSQHDTDAVPGRVRSPGNIRS
Ga0306920_1032321771	3300032261	Soil	MNQPRAADDFATIRARMEELRREREAAQATEGEAKSDPPMRFNRNRYWSNQEMSAGSGRVRQSGQIRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences