NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F100103

Metagenome Family F100103

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100103
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 77 residues
Representative Sequence MAKSDSKKRAELMAKEWKKSRSSVRSLNDLVDMGLLHSQELGGWRALEGESYPDPRAGEIVVFEDFFKRGFGVPVHPFL
Number of Associated Samples 2
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.98 %
Associated GOLD sequencing projects 2
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (96.078 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(99.020 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.38%    β-sheet: 0.00%    Coil/Unstructured: 62.62%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF04195Transposase_28 36.27
PF00665rve 0.98
PF00218IGPS 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 0.98
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.98
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.98
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.98
COG4584TransposaseMobilome: prophages, transposons [X] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.08 %
All OrganismsrootAll Organisms3.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300014486|Ga0182004_10014407All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor6212Open in IMG/M
3300014486|Ga0182004_10019843All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor5086Open in IMG/M
3300014486|Ga0182004_10021855All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor4763Open in IMG/M
3300014486|Ga0182004_10122383All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1059Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root99.02%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_1000043963300014486RootMAKSNSKKGAEMMAKEWKKSRSSTRSLNDLVRMGLLHNQELGGWRAPERESYPDPRAGEVVVFEDFFKRRFGVSVHSFLQGLLL*
Ga0182004_1000405963300014486RootMSKDWKKSRSTTKSINELIEMGLLHNQELGGWRAPSRESIPDPRAGKIVVFEGFFKRGFGVPVHLFL*
Ga0182004_1000504713300014486RootMAKSDSKKRAELMAKEWKKSQSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRADEIVVFEDFFKRGF
Ga0182004_1001440733300014486RootMAKSDSKKRAELMAKEWKKSQSSVRSLNDLVGKGLLHSQELSGWRAPKGESYPDPRAGEITVFEDFFKRGFGIPVHPFL*
Ga0182004_1001566793300014486RootMAKSDSKKRAEMMAMEWKKSQSSTRSLNDLVGKGLLHNQELGGWRAPEGESYTDPRAGEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1001644223300014486RootMAKSDLKKSAEMMAKEWKKSRSTTRSLNDLVQMGLLHDQELGGWRALEGKSYPDP*
Ga0182004_1001984363300014486RootMAKSYSKKRTELMAKEWKKSQSSVRSLNDLVGMGLLHSQELGGWRALEGESYPDPRAGEIVVFEDFF*
Ga0182004_1002185523300014486RootMVKSDSKKRAELMAKEWKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRASEIVVFEDFFKRGFGIPVHPFL*
Ga0182004_1002486323300014486RootMAKSDLKKRAEMMAKEWKKSRSTTRSLNDLVGMGLLHNQELGGWRAPDRESFPDPCAGEIVVFEDYFKRGFGVPVHPFI*
Ga0182004_1003455943300014486RootMAKIDSKKRAELMAKKWKKSRSSVRSLNDLVVMGLLHSQELGSWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFL*
Ga0182004_1004398643300014486RootMAKSDSKRRAELVAKEWKKSRSSTRSLNDLVGMGLLHDQELGGWRALEGESHPDPRTVEIVIFKDFFKRGFGIPVHPFL*
Ga0182004_1004405933300014486RootMTKSDSKKRAELMAKEWKKSQSSVRSLNDLVGMGLLHSQELGGWRAPEGESYPNPRAGEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1004708353300014486RootMAKSDAKKRAEMMAKEWKKSRSNTRSFNDLVEKGLLHNQELGGWRGPDGESYPDPRAGEIVVFEDFFKRGFGIRVHPFL*
Ga0182004_1005069243300014486RootMAKSDSKKRADMMAKEWKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPV
Ga0182004_1005282323300014486RootMAKSDSKKRVELMANEWKKSRSSTRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFF*
Ga0182004_1005622133300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHCQELGGWMAPEGESYPDPRAGEIMVFEDFFKRGFGVPVHPFL*
Ga0182004_1005677013300014486RootMAKSDSKKRAELMAKEWKKSRSTVKSLSDLVNMGLLHSPKLGGWRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFLQGLLLYY
Ga0182004_1005891933300014486RootMAKSDSKKRAELMAKEWKKSRSTARSLGDLVDMGLLHSPKLGGWRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFL*
Ga0182004_1006072423300014486RootMAKSDSKKRAEVMAKEWKKSRSSTRSLNDLIGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKKGFGIPVHPFL*
Ga0182004_1006102713300014486RootMMAKSDSKKRAEMMAKEWMKSRCTTRSLNDLVEVGLLHNQELGGWRAPEGESYPDPRACGIVVFEDFFKRGFGVPVHLFL*
Ga0182004_1006426433300014486RootMVKSNSKKRAELMAKEWKKSRRSVRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRATEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1006480813300014486RootEMMAKEWKKSRSSTRSLNDLVEMGLLHNQELGAWRAPEGESYPDPRAGEIIVFEDYFKRGFGIPVHHFF*
Ga0182004_1006950023300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDFVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFVDFLKRGFGVPVHPFL*
Ga0182004_1007056023300014486RootMFSARKMAKSDAKKRAEMMAKEWKKSRSTTRSLNDLVEMGLLHDQELGGWRAPEGESYPDPRAGEIVVFEDFFQEGLWGAGSSVSSGIASLL*
Ga0182004_1007080513300014486RootMAKSDSKKRAELMAKEWKKSRRSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGILVHPFL*
Ga0182004_1007478923300014486RootMAKSDSKKRAELMAKECKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPV
Ga0182004_1007492823300014486RootMAKSDSKKRADLMAKEWKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFL*
Ga0182004_1007990823300014486RootMAKSDSKKRADLMAKEWKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1008033313300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNNLVGMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEDFFKR
Ga0182004_1008048113300014486RootMAKSDSKKRAELMDKEWNKSYSTAKSLSDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFVKRGFGVPVHPFL*
Ga0182004_1008154023300014486RootMVKSDSKKRAELMAKEWKKSRSSARSLNDLIGMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGF
Ga0182004_1008181623300014486RootMAKSDSKKRAELMAKEWKKSRSNARSLNDLVGMGLLHSQELDGWRAPEGESYPDPRAGEIVVFEDFFQEGLWDSCPSFSPGSSLL*
Ga0182004_1008621713300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLIDMGLLHSPELGGWRAPERESYPNPHAGEIVVFEDFLKRGFGVPVHPFL*
Ga0182004_1008741023300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSSELGGWRAPEGESFPDPRAGEIVVFE
Ga0182004_1008964713300014486RootMAKSDSKKRAELMAKEWKKSQSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEI
Ga0182004_1009398333300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHNPELGGWRAPEGESYPDPRAGEIVMFEDFIKRGFGVPVHPFLQGLLLYYEI
Ga0182004_1009642513300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHSQELGGWRVLEGESYPDPRAGEIVVFEDFFKRGFGVPVHPFLQGLLLYYE
Ga0182004_1009688833300014486RootMAKSDLKKRADLMAKEWKKSRSSTRSLNDLVGMGLLHNKELGGWRAPEGESYPDPRAGEIVVSEDFFKRGFGIPVHPFL*
Ga0182004_1009692633300014486RootMAKSDSKKRAELMAKLWKKSRSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVH
Ga0182004_1010028533300014486RootAVTPATPMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVDMELLHSPELGGWRAPEGESYPDPRAGEIVVFENFLKRGFGVPVHPFL*
Ga0182004_1010046013300014486RootMAKSDSKKRAELMAKEWKKSRSSVKSLNDLVDMGPLHSPELGGRRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFL*
Ga0182004_1010077523300014486RootMAKSDSKEWKKSRSSVKSLNDLVDMGLLHSPELGGWRAPEGESYPVPRAGEIVVFEDFLKRGFGISVHPFL*
Ga0182004_1010391813300014486RootMAKSDSKKRAELMVKEWKMSWSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIMVFEDFFKRGFGIPVHPFLQGLLLYYEIGSAICTRTRFFL
Ga0182004_1010414113300014486RootMAKSDSKKRAELMAKEWKKSRSTVKSLGDLVDMGLLHGPELGGWRAPEGESFPDPRAGEIVVFEDFVKRGFG
Ga0182004_1010737613300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVDMGLLHSQELGGWRALEGESYPDPRAGEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1011316523300014486RootMAKSDSKKRAELMAKEWKKSRSSTMSLNDLVEMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFL*
Ga0182004_1011468213300014486RootMAKSDSKKRAKLMAKEWKKSRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEI
Ga0182004_1011608513300014486RootMAKSDSKKRAELMAKEWKKSRSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEI
Ga0182004_1011609813300014486RootMAKSDSKKRAELMAKEWKKSRSNKRSLNDLVGMGLLHNQELGGWRALEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFL*
Ga0182004_1011613713300014486RootMAKSDSKKRSELMAKEWKKSRSSTRSLNGLIEMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGF
Ga0182004_1011667123300014486RootMAKSDSKKRAELMAKEWKKSRSSVKSLNDIVDMGLLHGPELGGWRAPEGESYPDPRAGEIVVFEDFFQEGFWGSCPSFSSGASLVL*
Ga0182004_1011895423300014486RootMAKSGSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHSQELGGWRAPEGDSYLDSRAGEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1012083113300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRAPEGESFPDPRAGEIVVFEDFVKRGF
Ga0182004_1012172623300014486RootMAKSDSKKRAELMAMEWKKSQSSVKSLNDVADMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEHFIKRGFGVLVHPFL*
Ga0182004_1012232123300014486RootMAKSDSKKRAELMAKEWKKSRSTEKSLGDLVDMGLLHSPELGGWRAPEGETFPDPRAGEIVVFEDFVKRGFGVPVHPFL*
Ga0182004_1012238323300014486RootMAKSDSKKRAKMMAKEWKKARSTTRSLNDLVEMGLLHNQELGGWRAPEGESYPDPRAGEIVVFGDFFKRGFGVSVHPFLQGLLL*
Ga0182004_1012266023300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHSQEHGGWRAPERESYPDPRAGEIVVFEDFFKRSFGVSVHPFL*
Ga0182004_1012279413300014486RootMAKSDSKKRAELMAKEWKKSHSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFE
Ga0182004_1012291133300014486RootMAKSDSKKRAELMAKEWKNSRSSVRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRASEIVVFEDFFKRGFGVPVHPFL*
Ga0182004_1012525113300014486RootMAKSDSKKRAEPMAKEWKKSRSNARSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVV
Ga0182004_1013525513300014486RootMAKSDSKKSAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPNPRAGEIVVFEDFVKRGFGVPVHPFLQGLLLY*
Ga0182004_1013560913300014486RootMAKSDSKKRAELMAKEWKKSRSTVKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFE
Ga0182004_1013594713300014486RootMAKNDSKKRAKLMAKEWKKSRSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIIVFEDFLKRGFGVPVHPFL*
Ga0182004_1013907123300014486RootMAKSDSKKRADLMAKEWKKSRSSVRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEDFFQEGFWGSRPSFSPGASSIL*
Ga0182004_1013933913300014486RootRAELMAKEWKKSRSSVKSLNDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFCKRGFGVPVHPFL*
Ga0182004_1014241523300014486RootMAKSDAKKRAEMMAKEWKKSQSNTRSLNDLVEKGLLHSQELGGWRALEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFLQGLLLYYEIG
Ga0182004_1014774013300014486RootMAKEWKKSWSSVRSLNDLVGIGLLHSQELGGWRAPQGESYPDPRAGEIVVFEDFFKRGFGVPVHPFLQG
Ga0182004_1015061713300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVNMGLLHGPELGGWRAPEGESFPDPRAGEIVVFEDFVKRSFG
Ga0182004_1015333413300014486RootMAKSDSKKRAELMAKEWKKSRSTTRSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFE
Ga0182004_1015628313300014486RootMAKSDSKKRAELMAKEWKKSRNTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVV
Ga0182004_1015793213300014486RootMAKSDSKKRAELMAKEWKKSRSNVKSLNDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFLKRG
Ga0182004_1016091813300014486RootMAKSDSKKRVVLMAKEWKKSSSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFE
Ga0182004_1016470823300014486RootLFVQLAIASAASMAKSDSKKRAELMAKEWKKSRSSTRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRASEIVVFEDFVKRGFGIPVHPFL*
Ga0182004_1018262913300014486RootMAKSDSQKRAELMAKEWKKSHSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEI
Ga0182004_1018777513300014486RootMVKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSSELGGWRAPEGESFPDPRAGEIVVFEDFIKRGFGVPVHPFLQGLL
Ga0182004_1019447623300014486RootMAKSDSKKRAELMAKEWKKSHSPAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFVKRGFGFPVHPFL*
Ga0182004_1019532123300014486RootMAKRYSKKRAELMAKEWKKSRSTVKSLSDLVNMGLLHSPELSGWRAPEGESYPNPRAGEIVVFEDFLKRGFGGSCPSFSLEASLVL*
Ga0182004_1019733513300014486RootMAKSDSKKRAELMAKEWKKSCSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDF
Ga0182004_1019880523300014486RootMAKEWKKSRSSVKSLNDLVDMGLLHSPELGGWRAPEGESYPEPRAGEIVVFEDFLKRGLRL*
Ga0182004_1020875313300014486RootMAKGHCQKRAELMAKEWKKSRSTAKSLGDLVDMGLLHGSELGGWRAPEGESFPDPRAGEIVVFEDFVKRGFGVPVHPFLQ
Ga0182004_1021420423300014486RootSKKRAELMAKEWKKSRSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFVKRGFGVPVHPFL*
Ga0182004_1021735713300014486RootMVKSNSKKRAELMAKEWKKSRSTSKSLGDLIDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFVKRGFGVPVHPF
Ga0182004_1022418723300014486RootMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHSQELGGRRAPDWESYPDPHAGEIVVFEDFYKRGFGVLVHPFL*
Ga0182004_1023610713300014486RootMAKSDSKKRAELMAKDWKKSRSTTKSLGDLVDMGLLHSSELGGWTAPEGESFPDPRAGEIVVFEDFIKRGFGVPVHPFLQGLLLY
Ga0182004_1023637913300014486RootMAKSDSKKRAELMAKEWKKSRSTTKSLGDLVDMGLLHSPELGSWRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFLQGLL
Ga0182004_1024065223300014486RootMAKSDSKKRAELMAKEWKMSRSTVKSLSDFVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFLQGLL
Ga0182004_1024952413300014486RootMAKGHSQKRAELMAKEWKKSRSTAKTLGDLVDMGLLHSSELGGWRAPEGESFPDPRAGEIVVFEDFVKRGFGVPVHPFLQ
Ga0182004_1024953513300014486RootMAKEWKKSRSTTKSLGDLVDMGLLHGPELGGWRAPEGESFPDPRAGEIVVFEDFVKRGFGVPVHTFL
Ga0182004_1025336713300014486RootMVKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRALEGESYPDPRAGEIVVFEDFLKRGFGVPVHPFLQG
Ga0182004_1025437513300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSSELGDWRAPEGESFPDPRAGEIVVFEDFIKRGFGVPVHPFLQGLL
Ga0182004_1025765113300014486RootMAKSDSKKRAKLMAKEWKKSHSTTKYLGDLVDMGLLHIPELGGWRAPEGESYPDPRAGEIVVFEDFIKRGFGVPVHPFLQGL
Ga0182004_1025828213300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIIVFEDFLKRGFGVPVHPFSSGSSFVL*
Ga0182004_1025866413300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRAPEGESFPDPRAGEIVVFEDFVKRGFGVPVHPF
Ga0182004_1025990723300014486RootMAKSDSRKRAEPMAKEWKKSQSTMKCLSDLVDKGLLHSLELGGWRALEGESYPDPRAGEIVVFEDFLKRGFGVPVYPFLQGLLLYYEIG
Ga0182004_1027016813300014486RootMAKSESKKRAELMAKEWKKSRSTTKSLGDLVDMGLQHSPELGGWRAPEGESYPDPHAGEIVVFEDFIKRGFGVPVHPFLQG
Ga0182004_1027658613300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFLKRGF
Ga0182004_1028331823300014486RootMAKSDSKKRAELMAKEWKKHRSSTRSLNDLVGMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFK
Ga0182004_1029226213300014486RootMAKSDSKKRAELMAKEWKKSRSTAKSLGNLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFEDFLKRGFG
Ga0182004_1029259613300014486RootMAKSDSKKRAELMAKEWKKSRSTTKSLGDLVDMGLLHSPELGGWRAPEGESYPDHHAGEIVIFEDFIKRGFGVPVHPFSSRSSFVL*
Ga0182004_1029326713300014486RootMVKSDSKKRAELMAKEWKKSHGTAKSLGDLVDMGLLHSPELGGWRAPEGESYPDPRAGEIVVFED
Ga0182004_1029642213300014486RootMAKSDSKKRADLMAKEWKKSQSSTRSLNDLVIMGLLHNQELGGWRAPEGESYPDPRAGEIVVFEDFFKRGFGIPVHPFL*
Ga0182007_1043203723300015262RhizosphereMAKSDSKKRAELMAKEWKKSRSSVRSLNDLVGMGLLHSQELGGWRAPEGESYPDPRAGEIVVFEHFIKRGFGVLVHPFL*


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.