Metagenome / Metatranscriptome Family F100054

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100054
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	88 residues
Representative Sequence	MHEMDTAARREDPAKPTSGLDAKRVADISRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPISLDGTEFESSLGDV
Number of Associated Samples	68
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.55 %
% of genes near scaffold ends (potentially truncated)	27.18 %
% of genes from short scaffolds (< 2000 bps)	87.38 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (36.893 % of family members)
Environment Ontology (ENVO)	Unclassified (31.068 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.37% β-sheet: 0.00% Coil/Unstructured: 57.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00190	Cupin_1	4.85
PF04224	DUF417	4.85
PF00072	Response_reg	3.88
PF03741	TerC	2.91
PF03401	TctC	1.94
PF08447	PAS_3	1.94
PF00211	Guanylate_cyc	1.94
PF00106	adh_short	0.97
PF09206	ArabFuran-catal	0.97
PF04392	ABC_sub_bind	0.97
PF13751	DDE_Tnp_1_6	0.97
PF13776	DUF4172	0.97
PF00126	HTH_1	0.97
PF13649	Methyltransf_25	0.97
PF00528	BPD_transp_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	4.85
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	2.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.94
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.94
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.97

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	94.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	89.32 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	87.38 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.97 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	84.47 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.97 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	64.08 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.85 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.97 %
Lactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Lactobacillus	0.97 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	64.08 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.85 %
Bradyrhizobium sp. sBnM-33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	0.97 %
Rhizobium tibeticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium tibeticum	0.97 %
Lactobacillus equicursoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Lactobacillus → Lactobacillus equicursoris	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12925736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	542	Open in IMG/M
3300001137\|JGI12637J13337_1023722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	550	Open in IMG/M
3300001369\|JGI12701J14581_1011616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	605	Open in IMG/M
3300001545\|JGI12630J15595_10018083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1498	Open in IMG/M
3300001545\|JGI12630J15595_10034077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1045	Open in IMG/M
3300001593\|JGI12635J15846_10199042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1326	Open in IMG/M
3300001593\|JGI12635J15846_10395401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	835	Open in IMG/M
3300001661\|JGI12053J15887_10419524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300002245\|JGIcombinedJ26739_100072299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3184	Open in IMG/M
3300002245\|JGIcombinedJ26739_100121268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2462	Open in IMG/M
3300002245\|JGIcombinedJ26739_100179123	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300002245\|JGIcombinedJ26739_100689675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	899	Open in IMG/M
3300002906\|JGI25614J43888_10083401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	880	Open in IMG/M
3300002906\|JGI25614J43888_10168054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	590	Open in IMG/M
3300002914\|JGI25617J43924_10105731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1003	Open in IMG/M
3300002914\|JGI25617J43924_10218630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	636	Open in IMG/M
3300002917\|JGI25616J43925_10003675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6463	Open in IMG/M
3300002917\|JGI25616J43925_10162236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	886	Open in IMG/M
3300005440\|Ga0070705_101914771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Lactobacillus → Lactobacillus equicursoris	505	Open in IMG/M
3300005921\|Ga0070766_11018717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	570	Open in IMG/M
3300006176\|Ga0070765_101184085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	722	Open in IMG/M
3300006893\|Ga0073928_10008450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12920	Open in IMG/M
3300007788\|Ga0099795_10397685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	625	Open in IMG/M
3300009143\|Ga0099792_10914651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	581	Open in IMG/M
3300009143\|Ga0099792_11267021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	502	Open in IMG/M
3300012198\|Ga0137364_10132019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1790	Open in IMG/M
3300012202\|Ga0137363_10223481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1521	Open in IMG/M
3300012202\|Ga0137363_10315323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1287	Open in IMG/M
3300012202\|Ga0137363_10650979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	891	Open in IMG/M
3300012205\|Ga0137362_10306610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1375	Open in IMG/M
3300012205\|Ga0137362_10403055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1185	Open in IMG/M
3300012208\|Ga0137376_10573483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	977	Open in IMG/M
3300012361\|Ga0137360_10533360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300012362\|Ga0137361_10299080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1472	Open in IMG/M
3300012685\|Ga0137397_10323632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1149	Open in IMG/M
3300012685\|Ga0137397_10436587	Not Available	975	Open in IMG/M
3300012896\|Ga0157303_10171135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	602	Open in IMG/M
3300012922\|Ga0137394_10484241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1051	Open in IMG/M
3300012922\|Ga0137394_10528653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1001	Open in IMG/M
3300012924\|Ga0137413_10049829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2422	Open in IMG/M
3300012924\|Ga0137413_10220219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1287	Open in IMG/M
3300012925\|Ga0137419_11734560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	533	Open in IMG/M
3300012927\|Ga0137416_10153079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1807	Open in IMG/M
3300012955\|Ga0164298_11514394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	524	Open in IMG/M
3300012958\|Ga0164299_10106485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1469	Open in IMG/M
3300012961\|Ga0164302_10278669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1079	Open in IMG/M
3300012984\|Ga0164309_11922666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	507	Open in IMG/M
3300013297\|Ga0157378_12723852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	547	Open in IMG/M
3300015051\|Ga0137414_1010992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1334	Open in IMG/M
3300020140\|Ga0179590_1030997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1314	Open in IMG/M
3300020140\|Ga0179590_1233782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	503	Open in IMG/M
3300020170\|Ga0179594_10390168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	528	Open in IMG/M
3300020580\|Ga0210403_10194461	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300021168\|Ga0210406_10392403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1113	Open in IMG/M
3300021168\|Ga0210406_10933642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	650	Open in IMG/M
3300021170\|Ga0210400_10228699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1517	Open in IMG/M
3300021170\|Ga0210400_10702090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	832	Open in IMG/M
3300021170\|Ga0210400_10773800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	787	Open in IMG/M
3300021363\|Ga0193699_10090330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1228	Open in IMG/M
3300021478\|Ga0210402_10530909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1092	Open in IMG/M
3300021479\|Ga0210410_10431675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1179	Open in IMG/M
3300021479\|Ga0210410_10503864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1081	Open in IMG/M
3300021559\|Ga0210409_10826161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	800	Open in IMG/M
3300022557\|Ga0212123_10010632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12899	Open in IMG/M
3300022724\|Ga0242665_10096058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	872	Open in IMG/M
3300024288\|Ga0179589_10269846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	759	Open in IMG/M
3300026285\|Ga0209438_1050528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1371	Open in IMG/M
3300026319\|Ga0209647_1020471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium tibeticum	4101	Open in IMG/M
3300026319\|Ga0209647_1028070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3344	Open in IMG/M
3300026319\|Ga0209647_1099473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1389	Open in IMG/M
3300026319\|Ga0209647_1207926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	673	Open in IMG/M
3300026551\|Ga0209648_10016373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6473	Open in IMG/M
3300026551\|Ga0209648_10050535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3562	Open in IMG/M
3300026551\|Ga0209648_10527325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	670	Open in IMG/M
3300026551\|Ga0209648_10735489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	538	Open in IMG/M
3300026557\|Ga0179587_10849907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	602	Open in IMG/M
3300027521\|Ga0209524_1083053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	673	Open in IMG/M
3300027537\|Ga0209419_1120658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	523	Open in IMG/M
3300027562\|Ga0209735_1021890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1311	Open in IMG/M
3300027583\|Ga0209527_1034371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1138	Open in IMG/M
3300027587\|Ga0209220_1158127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	585	Open in IMG/M
3300027591\|Ga0209733_1057321	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300027603\|Ga0209331_1010329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2450	Open in IMG/M
3300027603\|Ga0209331_1072129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	861	Open in IMG/M
3300027605\|Ga0209329_1057068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	837	Open in IMG/M
3300027610\|Ga0209528_1123546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	570	Open in IMG/M
3300027610\|Ga0209528_1137121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	537	Open in IMG/M
3300027635\|Ga0209625_1100255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	649	Open in IMG/M
3300027645\|Ga0209117_1116771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	717	Open in IMG/M
3300027651\|Ga0209217_1013898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2623	Open in IMG/M
3300027651\|Ga0209217_1061393	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300027660\|Ga0209736_1101964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	780	Open in IMG/M
3300027663\|Ga0208990_1177450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	551	Open in IMG/M
3300027678\|Ga0209011_1052212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1249	Open in IMG/M
3300027684\|Ga0209626_1026331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1406	Open in IMG/M
3300027727\|Ga0209328_10025127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1830	Open in IMG/M
3300027727\|Ga0209328_10041833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1408	Open in IMG/M
3300027727\|Ga0209328_10052021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1258	Open in IMG/M
3300027727\|Ga0209328_10113924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300028047\|Ga0209526_10160606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1571	Open in IMG/M
3300028047\|Ga0209526_10360527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	972	Open in IMG/M
3300028047\|Ga0209526_10530438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	763	Open in IMG/M
3300028047\|Ga0209526_10986500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.09%
Aquatic	Environmental → Aquatic	1.94%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.09%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.28%
Loam	Environmental → Terrestrial → Soil → Loam	39.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	38.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	36.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001369	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_129257361	3300000789	Soil	MHEMDTVAHREDAAKPTPGPDAKRVADISRVSAKARDDLWRRAMKNSPRGDGLRDNNLRKAAQRIVXEIRARRNPISFDGTEFESSLGDV*
JGI12637J13337_10237222	3300001137	Forest Soil	MREIDTAARAASLTSGLDAERFADISTASADVSGYQKAVDEFWRRAMKNTPCAEGLRDDGARKAVQRIVKEIRARRNPRSFDGTEFASSLGDV*
JGI12701J14581_10116161	3300001369	Forest Soil	MHNVDTAARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNL
JGI12630J15595_100180834	3300001545	Forest Soil	RCDYPLHTTSGLDANLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDGTELASSLGAV*
JGI12630J15595_100340772	3300001545	Forest Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSGKALDDLWQRAMKNSPRAEGLRDNNATNQRIVKEIRARRNLISFDGTEFESSLGYL*
JGI12635J15846_101990422	3300001593	Forest Soil	MYKIDTAARRDDLVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDDSLRKAAQRIIKEIRARGNLRLVDGAEFASSPVMLESLTYAHHNRFSER*
JGI12635J15846_103954012	3300001593	Forest Soil	MHKIDTAARRDDQVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEALRDDSLRKAAQRIVKEIRARRNLRLVDGTEFASSLGDV*
JGI12053J15887_104195241	3300001661	Forest Soil	AARREDPAQPISGLDAKRVADISRVSAKALDDLWQRAMKNGPRAEGLRDNSARKAAQRIVKEIRARRNPISFDGTEFENSLGDV*
JGIcombinedJ26739_1000722993	3300002245	Forest Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSGKALDDLWQRAMKNSPRAEGLRDDNATNQRIVKEIRARRNPISFDGTEFESSLGDV*
JGIcombinedJ26739_1001212685	3300002245	Forest Soil	MHNVDTAARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDGTELASSLGAV*
JGIcombinedJ26739_1001791233	3300002245	Forest Soil	MYEIDTAARRDDPARLTSGVDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII*
JGIcombinedJ26739_1006896751	3300002245	Forest Soil	MYEIDTAARRDDPARLTSGVDAKRVADMSRVSAKAFDDLWQRAMKNSPRGEGLRDNNLRKAAQRIVKEIRARRNPISFDCTEFESSLGDVWEALTPTRSSSAVWTVTS*
JGI25614J43888_100834012	3300002906	Grasslands Soil	MYEIDTAARRDDPARLTSGLDAKRVADISRASAKAIDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII*
JGI25614J43888_101680542	3300002906	Grasslands Soil	DTAARRDDPVQPTFGLNAKRVADISKASAKALDDLWQRAMKNSPRAERLHDDSARKAAQRIVKEIRARRSPRSVDVTELASSLG*
JGI25617J43924_101057312	3300002914	Grasslands Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKARDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNXISFDGTEFECSLGEV*
JGI25617J43924_102186301	3300002914	Grasslands Soil	MHKIDTAARRDDQVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEGLREDSIRKAAQRIVKEIKERRNPISVDGTEFASSLGDV*
JGI25616J43925_100036759	3300002917	Grasslands Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKARDGLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPISFDGTEFECSLGEV*
JGI25616J43925_101622361	3300002917	Grasslands Soil	MHTIDTAARRDDPVQPTFGLNAKRVADISKASAKALDDLWQRAMKNSPRAERLHDDSARKAAQRIVKEIRARRSPRSVDVTELASSLG*
Ga0070705_1019147711	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MHEMDTVVRREDRAKPTPGLDAKRVADMSRVSAKARDDLWQRAMKNSPCGEGLRDNNLRKTAQRIIKEIRARQNLISFNGTEFESSLGDV*
Ga0070766_110187171	3300005921	Soil	MHNVDTAARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEI
Ga0070765_1011840852	3300006176	Soil	MHETDTVARREDPAKPTSGLDANRVADMSRVSAKALDDLWQRAMKNSPSAEGLRDNNATNQRIVKEIRARR
Ga0073928_100084503	3300006893	Iron-Sulfur Acid Spring	MQNVDTAARRDHPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRRAAQRIVKEIRARRNLRSVDGTELASSLGAV*
Ga0099795_103976852	3300007788	Vadose Zone Soil	MHEMDTVARREDPAKPTPGLDAKRVADISRVSAKARDDLWRRAMKNSPRGDGLRDNNLRKAAQRIVKEIRARRNPISFDGTEFESSLGDV*
Ga0099792_109146511	3300009143	Vadose Zone Soil	MHEMDTVARREDPAKPTPGLDAKRVADISRVSAKARDDLWRRAMKNSPRGDGLRDNNLRKAAQRIVKEIRARRNPISFDGT
Ga0099792_112670212	3300009143	Vadose Zone Soil	MHEIYPAARADDPVQPTSGLDAKRLADRASAKALDDLWHRAMKNSPRAEGLRDGSARKAAQRIVKEIRARRNPDII*
Ga0137364_101320192	3300012198	Vadose Zone Soil	MDEMDTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNAHIIGRYRVRKQPW*
Ga0137363_102234814	3300012202	Vadose Zone Soil	AEAGIRHHVAGRRRKVMDEMDTVARRKDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW*
Ga0137363_103153233	3300012202	Vadose Zone Soil	MHKIDTAARCNYPVQPTPGLDAKRVADRASAKALHDLWQRAMKDSPRAEGLRDDDSAKKAAQRIIKEIRARRNPISDGTAFESSPW*
Ga0137363_106509791	3300012202	Vadose Zone Soil	MHEMDTAARREDPAKPTSGLDAKRVADISRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPISLDGTEFESSLGDV*
Ga0137362_103066101	3300012205	Vadose Zone Soil	MDEMDTVARRKDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW*
Ga0137362_104030552	3300012205	Vadose Zone Soil	MHKIDTAARYNFPVQPTSGLDVKRVADISKASAKALDDLWQRAMKDSPRAEGLRDDDSAKKAAQRIIKEIRARRNPISDGTAFESSPW*
Ga0137376_105734832	3300012208	Vadose Zone Soil	DTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNAHIIGRYRVRKQPW*
Ga0137360_105333602	3300012361	Vadose Zone Soil	MDEMDTVARRKDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPWLRPGSSYSHSLVLGGLVTS*
Ga0137361_102990802	3300012362	Vadose Zone Soil	MDEMDTVARRKDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDII*
Ga0137397_103236323	3300012685	Vadose Zone Soil	MDEMDTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDII*
Ga0137397_104365871	3300012685	Vadose Zone Soil	MYEVDTAARRDDPARLTSGVYAKRVADISIASAKALDNLWQQAMKNSTRAGGFSDNSARKAAQRIVKEI
Ga0157303_101711351	3300012896	Soil	MREMDTVARREDAAKPTPGLDANRVADISRVSAKARDDLWQRAMKNSPRGEGLRDNNLRKAAQRIVEEIRARRNPISFDGAEYESSLGDV*
Ga0137394_104842411	3300012922	Vadose Zone Soil	AGKRRKVMHEMDTAARREDPAKPTSGLDAKRVADISRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPISLDGTEFESSLGDV*
Ga0137394_105286532	3300012922	Vadose Zone Soil	RREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW*
Ga0137413_100498297	3300012924	Vadose Zone Soil	MDEMDTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW*
Ga0137413_102202193	3300012924	Vadose Zone Soil	MYEVDTAARRDDPAGLTSGVYAKRVADISMASAKALDDLWQQAMKNSTRAGRFSDNSARKAAQRIVKEITARRNPRSFDSTEFESSLGDV*
Ga0137419_117345601	3300012925	Vadose Zone Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKALDDLWQRAMKNSPRAEGLRDHNATNQRIVKEIRARRNPISFDGTEFESSLGDV*
Ga0137416_101530791	3300012927	Vadose Zone Soil	MYEVDTAARRDDPARLTSGVYAKRVADISMASAKALDNLWQQAMKNSTRAGGFSDNSARKAAQPIVKEITARRNPRSFDSTEFESSLGDV*
Ga0164298_115143941	3300012955	Soil	MHNVDTAARSDHLLHTTSGLDAKPVFDISRTTAKTLDELWQRAMKNSPCADELRDDGLSKAAQRIVKEIRARR
Ga0164299_101064852	3300012958	Soil	MHEMDTVAHREDLAKPTSGLDAKRVADMSRVSARARDNLWQRAMKNSPRGEGLRDNNLRKTAQRIVKEIRARQNPISFDGTEFESSLGDV*
Ga0164302_102786692	3300012961	Soil	MHDVDTAARSDHLLHTTSGLDAKPVFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSADGTELASSLGAV*
Ga0164309_119226661	3300012984	Soil	MHNVDTAARSDHLLHTTSGLDAKPVFDISRTAAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSADGTELASSLGAV*
Ga0157378_127238521	3300013297	Miscanthus Rhizosphere	MHNVDTAARSDHLLHTTSGLDAKPVFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSADGTELASSLGAV*
Ga0137414_10109922	3300015051	Vadose Zone Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRMSAKALDDLWQRAMKNSPPAEGLRDNNATNQRIVKEIRARRNPISFDGTECESSLGDL*
Ga0179590_10309972	3300020140	Vadose Zone Soil	MDEMDTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW
Ga0179590_12337821	3300020140	Vadose Zone Soil	MHEMDTAARREDPAKPTSGLDAKRVADISRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRLNRYPPQEIQMRRFASR
Ga0179594_103901682	3300020170	Vadose Zone Soil	KVMDEMGTVARREDPAKPTSGLDAKRDADMSRVSAKARDNPWQRAMKNSPRGEGLRDNNLREAALRIVKEIRARRNPDIIGRYRVRKQPW
Ga0210403_101944612	3300020580	Soil	MHEMDTVARRKDPAKPTSGLDAKRVADMSRVSAKALDDLWQRAMKNSPRGEGPRDNNLRKAAQHIVKEIRARRNPISFDGTEFESSLGDVCEALTRTRSSSTVWTVTS
Ga0210406_103924032	3300021168	Soil	MHGMDTVARREDPAKPTSGLDAKRVADMSRVSAKALDDLWQRAMKNSPRAEGLRDNNATNQRIVKEIRARRNPISFDGTEFESSLGDVWEALTPTRSSSAVWTVAS
Ga0210406_109336421	3300021168	Soil	MHEMGTVARREDAAKPTPGLDAKRAADIARVSAKARDDLWQRAMKNSPRGEGPRDNNLRKAAQHIVKEIRARRNPISFDGT
Ga0210400_102286992	3300021170	Soil	MHEMDTVARREDAAKPTFGLDAKRVAGMSRVSAKALDDLWQRAMKNSPRAEGFRNNNARTAAQRIVKEIRARRNLISFDGTEFESSLGDV
Ga0210400_107020901	3300021170	Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNLISFDGTEFESSLGDV
Ga0210400_107738001	3300021170	Soil	MHNVDTAARRDHPLQMTSGLDAKLVFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKVAQRIVKEIRARRNLRSADGAELASSLGNV
Ga0193699_100903302	3300021363	Soil	MREIDTAARPTSGLDAKRVADISTALADMSGCQKAIDELWQRAMKNSPCAEGLRDDGARKATQRIVKEIRARRNPRSFDGTGFASSLGDV
Ga0210402_105309092	3300021478	Soil	MHEMGTVARREDAAKPTPGLDAKRAADIARVSAKARDDLWQRAMKNSPRGEGPRDNNLRKAAQHIVKEIRARRNPISFDGTEFESGLGDVQETLTPTRSSSAVWKESDGAPHTIPFRSR
Ga0210410_104316752	3300021479	Soil	MHEMGTVARREDAAKPTPGLDAKRAADIARVSAKARDDLWQRAMKNSPRGEGPRDNNLRKAAQHIVKEIRARRNPISFDGNRVRKRPW
Ga0210410_105038642	3300021479	Soil	MHNIDAAARRDHPLHTTSGLDAKLVFDISRTTAKTLEELWQRAMKNSPRADELRDDGLRKSAQRIVKEIRARRNLRSVDGTELASSLGAV
Ga0210409_108261611	3300021559	Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII
Ga0212123_1001063213	3300022557	Iron-Sulfur Acid Spring	MQNVDTAARRDHPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRRAAQRIVKEIRARRNLRSVDGTELASSLGAV
Ga0242665_100960581	3300022724	Soil	MREIDTAARAASLTSGLDAERFADISTASADVSGYQKAVDEFWRRAMKNTPCAEGLRDDGARKAVQRIVKEIRARRNPRSFDGTEFASSLGDV
Ga0179589_102698462	3300024288	Vadose Zone Soil	MHEMDTAARREDPAKPTSGLDAKRVADISRVSAKALDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPIT
Ga0209438_10505283	3300026285	Grasslands Soil	MHEMDNVARREDPAKPTPGLDAKRVADISRVSAKARDDLWQPALKNSPRGEGLRDSNLRKAAQRIVKEIRARRNPISFEGTEFESSVGDV
Ga0209647_10204712	3300026319	Grasslands Soil	MYEIDTAARRDDPARLTSGLDAKRVADISRASAKAIDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII
Ga0209647_10280704	3300026319	Grasslands Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKARDDLWQRAMKNSPRAEGLRDSNARKAAQRIVKEIRARRNPISFDGTEFECSLGEV
Ga0209647_10994732	3300026319	Grasslands Soil	MHEMATVARREDPAKPTSGLDAKRVADMSMVSAEALDDLWQRATKNSPRGEGLRDNNLRKAAQRIAKEIRARRNPISFDGTEFESSLGDVYEALTPTRSSSAVWTVTS
Ga0209647_12079261	3300026319	Grasslands Soil	GRRRKVMHTIDTAARRDDPVQPTFGLNAKRVADISKASAKALDDLWQRAMKNSPRAERLHDDSARKAAQRIVKEIRARRSPRSVDVTELASSLG
Ga0209648_100163733	3300026551	Grasslands Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSAKARDDLWQRAMKNSPRAEGLRDNNARKAAQRIVKEIRARRNPISFDGTEFECSLGEV
Ga0209648_100505352	3300026551	Grasslands Soil	MHTIDTAARRDDPVQPTFGLNAKRVADISKASAKALDDLWQRAMKNSPRAERLHDDSARKAAQRIVKESRARRSPRSVDVTELASSLG
Ga0209648_105273251	3300026551	Grasslands Soil	MHKIDTAARRDDQVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEGLREDSIRKAAQRIVKEIKERRNPISVDGTEFASSLGDV
Ga0209648_107354892	3300026551	Grasslands Soil	MHEIHTAARRDDPVQPTSGLDAQRGADISRASVKALDDPWQRAMKNGPRAEGLGDNSATKAAQRIVKEIRARGNPRSFDGTEFESSLGDV
Ga0179587_108499071	3300026557	Vadose Zone Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRMSAKALDDLWQRAMKNSPPAEGLRDNNATNQRIVKEIRARRNPISFDGTECESSLG
Ga0209524_10830531	3300027521	Forest Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSGKALDDLWQRAMKNSPRAEGLRDNNATNQRIVKEIRARRNPISFDGTECESSLGDL
Ga0209419_11206581	3300027537	Forest Soil	TFGLDAKLVFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDDTELASSLGAV
Ga0209735_10218901	3300027562	Forest Soil	MHNVDTVARRDQPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDGTELASSLGAV
Ga0209527_10343711	3300027583	Forest Soil	MYKIDTAARRDDLVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDDSLRKAAQRIIKEIRARGNLRLVDGAEFASSPVMLESLTYAHHNRFSER
Ga0209220_11581271	3300027587	Forest Soil	ARCDYPLHTTSGLDANLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDGTELASSLGAV
Ga0209733_10573212	3300027591	Forest Soil	TFCLDAKRVADISRASAKALDDLWQRAMKNSPRAEALRDDSLRKAAQRIVKEIRARRNLRLVDGTEFASSLGDV
Ga0209331_10103293	3300027603	Forest Soil	MHNVDTAARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDGTELASSLGAV
Ga0209331_10721292	3300027603	Forest Soil	MYEIDTVARRDDPARLTSGVDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEIVYGREFESSLGDV
Ga0209329_10570682	3300027605	Forest Soil	MREIDTAARAASLTSGLDAERFADISTASADLSGYQKAVDEFWRRAMKNTPCAEGLRDDGARKAVQRIVKEIRARRNPRSFDGTEFASSLGDV
Ga0209528_11235461	3300027610	Forest Soil	DTVARRDQPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDDTELASSLGAV
Ga0209528_11371211	3300027610	Forest Soil	MYEIDTVARRDDPARLTSGVDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII
Ga0209625_11002551	3300027635	Forest Soil	TVARREDPAKPISGLDAKRGADMSRVSAKAFDDLWQRAMKNSPRGEGLRDNNLRKAAQRIVKEIRARRNLRSVDDTELASSLGAV
Ga0209117_11167711	3300027645	Forest Soil	AARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNGPRADGLRDDSLRKAAQRIVKEIRARRNLRLVDGTEFANSLGDV
Ga0209217_10138983	3300027651	Forest Soil	MHNVDTVARRDQPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDDTELASSLGAV
Ga0209217_10613931	3300027651	Forest Soil	VARRDDPARLTSGVDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII
Ga0209736_11019642	3300027660	Forest Soil	MYKIDTAARRDDLVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPGAEALRDDSLRKAAQRIIKEIRARRNL
Ga0208990_11774501	3300027663	Forest Soil	MHEMDTVARREDTAKPTSGLDAKRVADMSRVSAKALDDFWQRAMKNSPRGDGLRDNNLRKAAQRIVKEIRARRNPISFDGTEF
Ga0209011_10522121	3300027678	Forest Soil	MHKIDTAARRNDPVQPTSGLDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNNATNQRIVKEIRARRNPISFDGTEFESSLGDV
Ga0209626_10263311	3300027684	Forest Soil	MYKIDTAARRDDLVQPTFCLDAKRVADMSRLSAKALDDLWQRAMKNSPRAEGLRDNNATNHRIVKEIRARRNPISFDGTEFESSLGDVWEALTPTRSSSPVWTVTS
Ga0209328_100251272	3300027727	Forest Soil	MHEMDTVARREDPAKPTSGLDANRVADMSRVSAKALDDLWQRAMKNSPRGEGLRDNNLRKAAQRIAKEIRARRNPISFDGTEFESSLGDV
Ga0209328_100418332	3300027727	Forest Soil	MHNVDTAARRDPPLHTTSGLDAKLIFDISRTTAKTLDELWQRAMKNSPRADELRDDGLRKAAQRIVKEIRARRNLRSVDDTELASSLGAV
Ga0209328_100520211	3300027727	Forest Soil	MYEIDTAARRDEPARLTSGVDAKRVADISRASAKALDDLWQHAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEII
Ga0209328_101139242	3300027727	Forest Soil	TSGLDAERFADISTASADVSGYQKAVDEFWRRAMKNTPCAEGLRDDGARKAVQRIVKEIRARRNPRSFDGTEFASSLGDV
Ga0209526_101606062	3300028047	Forest Soil	MHEMDTVARREDPAKPTSGLDAKRVADMSRVSGKALDDLWQRAMKNSPRAEGLRDNNATNQRIVKEIRARRNLISFDGTEFESSLGYL
Ga0209526_103605272	3300028047	Forest Soil	MYKIDTAARRDDLVQPTFCLDAKRVADISRASAKALDDLWQRAMKNSPGAEALRDDSLRKAAQRIIKEIRARRNLRLVDGTEFASSLGDV
Ga0209526_105304382	3300028047	Forest Soil	MYEIDTVARRDDPARLTSGVDAKRVADISRASAKALDDLWQRAMKNSPRAEGLRDNSARKAAQRIVKEIRARRNPEI
Ga0209526_109865001	3300028047	Forest Soil	RDAPARLTSGVDAKRVADMSRVSAKAFDDLWQRAMKNSPRGEGLRDNNLRKAAQRIVKEIRARRNPRSFDGTEFERSLGDV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100054

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences