NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F100043

Metagenome Family F100043

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100043
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 63 residues
Representative Sequence MEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL
Number of Associated Samples 90
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.90 %
% of genes near scaffold ends (potentially truncated) 21.36 %
% of genes from short scaffolds (< 2000 bps) 75.73 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.786 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(19.417 % of family members)
Environment Ontology (ENVO) Unclassified
(46.602 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.573 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.78%    β-sheet: 0.00%    Coil/Unstructured: 42.22%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00005ABC_tran 26.21
PF00571CBS 6.80
PF03006HlyIII 4.85
PF08240ADH_N 3.88
PF03641Lysine_decarbox 3.88
PF00891Methyltransf_2 2.91
PF01061ABC2_membrane 1.94
PF00930DPPIV_N 1.94
PF02800Gp_dh_C 1.94
PF00326Peptidase_S9 1.94
PF14289DUF4369 0.97
PF07883Cupin_2 0.97
PF14100DUF6807 0.97
PF08789PBCV_basic_adap 0.97
PF00210Ferritin 0.97
PF00166Cpn10 0.97
PF00044Gp_dh_N 0.97
PF08327AHSA1 0.97
PF02463SMC_N 0.97
PF00156Pribosyltran 0.97
PF05368NmrA 0.97
PF01925TauE 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 4.85
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 3.88
COG0057Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenaseCarbohydrate transport and metabolism [G] 2.91
COG0823Periplasmic component TolB of the Tol biopolymer transport systemIntracellular trafficking, secretion, and vesicular transport [U] 1.94
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 1.94
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.97
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.79 %
UnclassifiedrootN/A26.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908041|P3_CLC_ConsensusfromContig127958Not Available664Open in IMG/M
2199352024|deeps__Contig_60564All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300001398|JGI20207J14881_1038776All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300001449|JGI20208J14878_1000766All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae6824Open in IMG/M
3300001534|A15PFW1_10084936All Organisms → cellular organisms → Bacteria → Calditrichaeota → Calditrichia → Calditrichales → unclassified Calditrichales → Calditrichales bacterium1298Open in IMG/M
3300001535|A3PFW1_10150038All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300001537|A2065W1_10533236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → [Bacteroides] pectinophilus518Open in IMG/M
3300002100|JGI24809J26612_1003855All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae4386Open in IMG/M
3300003203|JGI25406J46586_10206917Not Available573Open in IMG/M
3300004114|Ga0062593_100076303All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales2245Open in IMG/M
3300004114|Ga0062593_101432312All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes740Open in IMG/M
3300005331|Ga0070670_100659246All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300005459|Ga0068867_100689358All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300005459|Ga0068867_100744003All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005530|Ga0070679_100317020Not Available1509Open in IMG/M
3300005535|Ga0070684_100307264All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales1456Open in IMG/M
3300005578|Ga0068854_100161088All Organisms → cellular organisms → Bacteria1738Open in IMG/M
3300005578|Ga0068854_100334837All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1234Open in IMG/M
3300005578|Ga0068854_100387188All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales1153Open in IMG/M
3300005614|Ga0068856_100043707All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae4407Open in IMG/M
3300005616|Ga0068852_100400972All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1349Open in IMG/M
3300005718|Ga0068866_10019986All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3060Open in IMG/M
3300005719|Ga0068861_101150124All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300005842|Ga0068858_102027687Not Available569Open in IMG/M
3300005902|Ga0075273_10050463Not Available757Open in IMG/M
3300005938|Ga0066795_10022297Not Available1809Open in IMG/M
3300006052|Ga0075029_100260173All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300006059|Ga0075017_100958158All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300006059|Ga0075017_100969375All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300006237|Ga0097621_101913428All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori566Open in IMG/M
3300006638|Ga0075522_10334205All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes728Open in IMG/M
3300006640|Ga0075527_10017174Not Available1876Open in IMG/M
3300006804|Ga0079221_10001740All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae7190Open in IMG/M
3300006806|Ga0079220_10040071Not Available2142Open in IMG/M
3300006949|Ga0075528_10000487All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae7419Open in IMG/M
3300006950|Ga0075524_10004950All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae4552Open in IMG/M
3300006950|Ga0075524_10075874Not Available1418Open in IMG/M
3300007004|Ga0079218_12545521Not Available606Open in IMG/M
3300007740|Ga0104326_133889All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae6180Open in IMG/M
3300009029|Ga0066793_10360506Not Available837Open in IMG/M
3300009553|Ga0105249_10756329All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1034Open in IMG/M
3300009553|Ga0105249_12342699All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes607Open in IMG/M
3300010375|Ga0105239_13542019All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300010396|Ga0134126_10000580All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes46629Open in IMG/M
3300010396|Ga0134126_12388837Not Available575Open in IMG/M
3300012005|Ga0120161_1000108All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae62267Open in IMG/M
3300012943|Ga0164241_10001981All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes23297Open in IMG/M
3300012955|Ga0164298_10517267All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300013100|Ga0157373_10023458All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4472Open in IMG/M
3300013100|Ga0157373_10150783All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1635Open in IMG/M
3300013102|Ga0157371_10009241All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales7777Open in IMG/M
3300013104|Ga0157370_10406757All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300013105|Ga0157369_12314432All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes544Open in IMG/M
3300013296|Ga0157374_10388965All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1390Open in IMG/M
3300013297|Ga0157378_13250042All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes505Open in IMG/M
3300013307|Ga0157372_10194417All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2350Open in IMG/M
3300013772|Ga0120158_10065314All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2391Open in IMG/M
3300014058|Ga0120149_1094058All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300014325|Ga0163163_10886776Not Available955Open in IMG/M
3300014326|Ga0157380_12793632Not Available555Open in IMG/M
3300014968|Ga0157379_10865584All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300019888|Ga0193751_1131454All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae920Open in IMG/M
3300019890|Ga0193728_1138144Not Available1085Open in IMG/M
3300020021|Ga0193726_1377700Not Available508Open in IMG/M
3300021445|Ga0182009_10298864All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300025495|Ga0207932_1018978Not Available1899Open in IMG/M
3300025504|Ga0208356_1025009All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300025574|Ga0208717_1008845All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium3007Open in IMG/M
3300025574|Ga0208717_1012678All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → unclassified Arachidicoccus → Arachidicoccus sp. B3-102409Open in IMG/M
3300025581|Ga0208355_1031445Not Available1444Open in IMG/M
3300025664|Ga0208849_1133022Not Available659Open in IMG/M
3300025679|Ga0207933_1001402All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae18334Open in IMG/M
3300025703|Ga0208357_1077880Not Available1019Open in IMG/M
3300025703|Ga0208357_1111557Not Available801Open in IMG/M
3300025829|Ga0209484_10135509All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes589Open in IMG/M
3300025854|Ga0209176_10028277Not Available1185Open in IMG/M
3300025891|Ga0209585_10058615All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1427Open in IMG/M
3300025891|Ga0209585_10199500Not Available784Open in IMG/M
3300025899|Ga0207642_10077388All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1604Open in IMG/M
3300025911|Ga0207654_10106035All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1740Open in IMG/M
3300025912|Ga0207707_11178515All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300025916|Ga0207663_10793237All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300025923|Ga0207681_10220872All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300025934|Ga0207686_10885894All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300025945|Ga0207679_10426631All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1171Open in IMG/M
3300025949|Ga0207667_11253763All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300025961|Ga0207712_10910719All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium777Open in IMG/M
3300025981|Ga0207640_10262416All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1347Open in IMG/M
3300025981|Ga0207640_10274893All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1320Open in IMG/M
3300026041|Ga0207639_11632412All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300026078|Ga0207702_10034635All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae4223Open in IMG/M
3300026088|Ga0207641_10603761All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium1075Open in IMG/M
3300026089|Ga0207648_10636237All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300026116|Ga0207674_11419229All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300026142|Ga0207698_10063466All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2891Open in IMG/M
3300026271|Ga0209880_1088956Not Available635Open in IMG/M
3300027725|Ga0209178_1001427All Organisms → cellular organisms → Bacteria7484Open in IMG/M
3300027765|Ga0209073_10025321All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Hanamia → Hanamia caeni1795Open in IMG/M
3300027898|Ga0209067_10238026Not Available987Open in IMG/M
3300028381|Ga0268264_11981596Not Available592Open in IMG/M
3300031670|Ga0307374_10008610All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes15196Open in IMG/M
3300032897|Ga0335071_11956170All Organisms → cellular organisms → Bacteria → FCB group530Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil19.42%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere11.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost5.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.91%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.97%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.97%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300001398Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012EnvironmentalOpen in IMG/M
3300001449Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallowEnvironmentalOpen in IMG/M
3300001534Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002100Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDAEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005902Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007740Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025574Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)EnvironmentalOpen in IMG/M
3300025581Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025679Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025703Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025829Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)EnvironmentalOpen in IMG/M
3300025854Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026271Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P3_CLC_027531902124908041SoilMEHKKELEDLNKKSLEKFDEYLRTKENLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLETLEI
deeps_008983802199352024SoilMEHKKELEELNKKSLEKIDEYLKSXXXIDKDQHEKLTTAKNKWQSSWTDFMDILMYLETLEI
JGI20207J14881_103877623300001398Arctic Peat SoilMEHTKELDDLNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQSSWSDLMDVLMYFERVEI*
JGI20208J14878_100076693300001449Arctic Peat SoilMEHTKELEALNKKSLEKIDEYVKSKSNLDPEHNEKLNEAKSKWQSSWTDFMDVLMYLETLEL*
A15PFW1_1008493633300001534PermafrostSLEKYDEYVKSKTNLDKEHHDKLIEAKDKWQSSHAELMKFLMYLETLEI*
A3PFW1_1015003813300001535PermafrostMEHKKELEELNKRSLEKYDEYVKSKTNLDKEHHDKLIEAKDKWQSSHAELMKFLMYLETLEI*
A2065W1_1053323613300001537PermafrostMEHTKELEDLNKKSLEKIDEYLKTKDNLDKEHHEKVNAAKSKWQSSWSDFMDVLMYL
JGI24809J26612_100385513300002100SoilMEHKELLEDLNKQSLEKIEEYLKTKKGLKDEHREKLHEAKNKWQSSWTDFMDVLMYLERLEL*
JGI25406J46586_1020691723300003203Tabebuia Heterophylla RhizosphereMEHKKLLEDLNSESLKKIEEYLKTKKNLKDEHLEKFHEAKNKWQNSWTDFMDVIMFLERLEL*
Ga0062593_10007630323300004114SoilMEHAKELEELNKKSLEKIDEYLKTKENLGEEHHEKLNEAKKKWQSSWTDFMDILMYLETLEI*
Ga0062593_10143231223300004114SoilMEHKQLLEDLNKQSLEKIEEYLKTKKHLKDEHRKKLHEAKNKWQSSWTDFMDVLMYLERLEI*
Ga0070670_10065924623300005331Switchgrass RhizosphereMEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL*
Ga0070711_10031290813300005439Corn, Switchgrass And Miscanthus RhizosphereMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDF
Ga0068867_10068935823300005459Miscanthus RhizosphereMEHKKLLEDLNTESLKKIEEYLKTKKNLPDEHREKLDMAKKNWQSSWTDLMDVLIVLERLEI*
Ga0068867_10074400323300005459Miscanthus RhizosphereLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL*
Ga0070679_10031702013300005530Corn RhizosphereMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0070684_10030726423300005535Corn RhizosphereMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQDHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0068854_10016108833300005578Corn RhizosphereMMEHTKELEDLNKKSLDKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0068854_10033483723300005578Corn RhizosphereLRLLENRARDEQVCLLCNFIQNTIMEHTKELDDLNKKSLQKLDDYLKTKENLREEHHEKLNDAKKKWQSSWTDFMDVLLYLETLEI*
Ga0068854_10038718823300005578Corn RhizosphereMEHTKELEELNKKSLEKIDEYLKTKGNLGGEHHEKLNEAKKKWQSSWTDFMDILMYLETLEI*
Ga0068856_10004370753300005614Corn RhizosphereMEHTKELEDLNKKSLEKIDEFLKSKNNLDQDHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0068852_10040097223300005616Corn RhizosphereVALILRNFNANHIAMEHKKELDKLHQKSLDKIDEYLSTKKNLSEEHHEKFKEAKKNWQSSWTDLMQVLMYLETLEI*
Ga0068866_1001998653300005718Miscanthus RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDILMYLETVEL*
Ga0068861_10115012413300005719Switchgrass RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDVLLYLETVEL*
Ga0068858_10202768713300005842Switchgrass RhizosphereMEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLIYLETLEI*
Ga0075273_1005046323300005902Rice Paddy SoilMEHTKELDELHKKSLDKIDEYLNSKNNLSEEHHEKLTEAKKNWQSSWTDLMQVLMYLEKLEI*
Ga0066795_1002229713300005938SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVVMYLETLEI*
Ga0075029_10026017333300006052WatershedsMEHTDELEELNKKSLEKIDAYIQSKGALDPEHAEKLNAAKSKWQASWTDFMDFLMYLETLEI*
Ga0075017_10095815823300006059WatershedsMEHTKELEDLNKKSLEKIDEYLKTKNKLDAEHHEKLNEAKSKWQNSWTDFMNVLMYLETLEL*
Ga0075017_10096937513300006059WatershedsMEHKKELDDLHKKSLEKIDEYIRTRGTLDKEDHQKLTEAKNKWQNSWSDFMDFLMYLERLEL*
Ga0097621_10191342813300006237Miscanthus RhizosphereMEHTKELEDLNKKSLEKIDEYLKTKENLGEEHHEKLNDARKKWQSSWADFMDVIMYLETLEI*
Ga0075522_1033420513300006638Arctic Peat SoilLDELNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQSSWSDLMDVLMYLETVEI*
Ga0075527_1001717433300006640Arctic Peat SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLEKLEI*
Ga0079221_1000174043300006804Agricultural SoilMEHKKQLEDLNKKSLEKIDEYLKTKDRLPQEHHEKVNDAKNKWQSAWVELMNTLMFLERLEI*
Ga0079220_1004007113300006806Agricultural SoilMEIGSCENSFPVALILRNFIANQIAMEHKKELEELHKKSLDKIDALIDSKKNLTEDHHEKLKEAKKKWQDSWSGLMDVLMYLETLEI*
Ga0075528_1000048723300006949Arctic Peat SoilMEHKKILEDLNKQSLEKIEAYLKSKGTLKQEHHEKINEAKAKWQNSWSDFMDALMYLERIEL*
Ga0075524_1000495063300006950Arctic Peat SoilHFCNFIKKFMEHKKILEDLNKQSLEKIEAYLKSKGTLKQEHHEKINEAKAKWQNSWSDFMDALMYLERIEL*
Ga0075524_1007587423300006950Arctic Peat SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLETLEI*
Ga0079218_1254552113300007004Agricultural SoilMEHKKDLEDLNKRSLEKFEEYLRTKGNLNKEHHEKLNEAKNKWQSSWTDFMDVLMYLERLEL*
Ga0104326_13388953300007740SoilMEHKKELEELNKKSLEKIDEYLKTKGNLDKDHHEKLSAAKHKWQSSWTDLMDVLMYLERIEI*
Ga0066793_1036050623300009029Prmafrost SoilMEHKKELEDLNKKSLEKFDEYLRTKANMDKEHHEKLNAAKNKWQSSWTDFMDVLMYLEKLEI*
Ga0105249_1075632923300009553Switchgrass RhizosphereMEHKKLLEDLNIESLKKIEEYLKTKKNLPDEHREKLDKAKKNWQSSWTDLMDVLIVLERLEI*
Ga0105249_1234269923300009553Switchgrass RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDVLIYLETVEL*
Ga0105239_1354201923300010375Corn RhizosphereEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0134126_10000580333300010396Terrestrial SoilMENKNELDELNKKSLDKIDEYLKTKKNLGKEHHEKLNDAKKKWQSSWSDLMDVLMYLETVEI*
Ga0134126_1238883713300010396Terrestrial SoilMEHTKELDELNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQASWSDLMDVLMYLET
Ga0120161_1000108273300012005PermafrostMEHKKILEDLNKQSLEKIEAYLKSKGTLKQEHHEKINEAKAKWQNSWSDFMDVLMYLERIEL*
Ga0164241_1000198183300012943SoilMEHKTELEELNKKSLDKIDEYLKTKKNLGKEHHEKLDDAKKKWQASWSGLMDVLMYLERVEI*
Ga0164298_1051726713300012955SoilILCNLFQNKIMEHTKELEELNKKSLEKIDEYLKTKGNLGGEHHEKLNEAKKKWQSSWTDFMDILMYLETLEI*
Ga0157373_1002345863300013100Corn RhizosphereMEHKKELDELHKKSLDKLDEYLDTKKNLSEEHHEKLKEAKKNWQSSWADLMQVLMYLETLEI*
Ga0157373_1015078343300013100Corn RhizosphereMMEHTKELEDLNKKSLDKIDEYVKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL*
Ga0157371_1000924133300013102Corn RhizosphereMEHKKDLDELHKKSLDKIDEYLDTKKNLSEEHHEKLAEAKKKWQSSWTDLMQVLMYLETLEI*
Ga0157370_1040675723300013104Corn RhizosphereMDHKKELDDLNKKSLDKIDEYLKTKNNLGKDHHEKLEDAKKKWQASGSDLMDVLMYLERVEI*
Ga0157369_1231443213300013105Corn RhizosphereVALILRNFNANHIAMEHKKELDKLHQKSLDKIDEYLSTKKNLSEEHHEKFKEAKQNWQYSWTDLMQVLMYLETLEI*
Ga0157374_1038896523300013296Miscanthus RhizosphereLRLLENRARDEQVCLLCNFIQNSIMEHTKELDDLNKKSLQKLDDYLKTKENLREEHHERLNDAKKKWQSSWTDFMDVLLYLETLEI*
Ga0157378_1325004213300013297Miscanthus RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDVL
Ga0157372_1019441723300013307Corn RhizosphereMEHKKELDELHKKSLDKIDEYLDTKKNLSEEHHEKLKEAKKNWQSSWADLMQVLMYLETLEI*
Ga0120158_1006531443300013772PermafrostMEHTKELEDLNKKSLEKIDEYLKTKDNLDKEHHEKVNAAKSKWQSSWSDFMDVLMY
Ga0120149_109405823300014058PermafrostMKKIMEHTKELEDLNKKSLEKIDEYLKTKDNLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLETLEI*
Ga0163163_1088677623300014325Switchgrass RhizosphereEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL*
Ga0157380_1279363213300014326Switchgrass RhizosphereMEHQKALEDLNKKSLEKIDEYLKTKENLNKEHHDKLNDAKKKWQNSWTDFMDVLMYLERLEL*
Ga0157379_1086558413300014968Switchgrass RhizosphereMEHTKELEDLNKKSLEKIDEYLKTKENLGEEHHEKLNEARKKWQSSWADFMDVIMYLEILEI*
Ga0193751_113145423300019888SoilMEHKKELEDLNKKSLEKLDEYLKTKGNLGKEHHEKINAAKNKWQTSWTDFMDVLMYLETL
Ga0193728_113814423300019890SoilMEHTKELESLNKKSLDKIDEYLKAKDNLDKEHLEKINAAKSKWQSSWTDFMDVLMYLETLEI
Ga0193726_137770033300020021SoilMEHTKELEDLHKKSLEKIDEYLKTKENLGEEHHEKLNEAKKKWQSSWTDFMDVLMYLETL
Ga0182009_1029886413300021445SoilMEHKQLLEDLNKQSLEKIEEYLKTKNLKKEHREKLHEAKNKWQSSWTDFMDILVYLETLE
Ga0207932_101897813300025495Arctic Peat SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLEKLEI
Ga0208356_102500923300025504Arctic Peat SoilMEHTKELEALNKKSLEKIDEYVKSKSNLDPEHNEKLNEAKSKWQSSWTDFMDVLMYLETLEL
Ga0208717_100884513300025574Arctic Peat SoilMEHTKELDELNKKSLYKIDEYLKTKNNLGKEHHEKLDDAKKKWQASWSDLMDVLMYLETVEI
Ga0208717_101267833300025574Arctic Peat SoilMEHTKELDELNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQASWSDLMDVLMYLETVEI
Ga0208355_103144513300025581Arctic Peat SoilEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLEKLEI
Ga0208849_113302213300025664Arctic Peat SoilMEHTKELNELNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQSSWSDLMEVLMYLETVEI
Ga0207933_100140293300025679Arctic Peat SoilMEHTKELDDLNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQSSWSDLMDVLMYFERVEI
Ga0208357_107788013300025703Arctic Peat SoilMEHTKELDELNKKSLDKIDEYLKTKNNLGKEHHEKVDDAKKKWQSSWSDLMDVLMYLETVEI
Ga0208357_111155723300025703Arctic Peat SoilMEHTKELDDLNKKSLDKIDEYLKTKNNLGKEHHEKLDDAKKKWQSSWSDLMDVLMYLERVEI
Ga0209484_1013550923300025829Arctic Peat SoilMEHKKILEDLNKQSLEKIEAYLKSKGTLKQEHHEKINEAKAKWQNSWSDFMDVLMYLERIEL
Ga0209176_1002827723300025854Arctic Peat SoilMEHKKELEDLNKKSLEKFDEYLRTKANMDKEHHEKLNAAKNKWQSSWTDFMDVLMYLEKLEI
Ga0209585_1005861523300025891Arctic Peat SoilMEHKKILEDLNKQSLEKIEAYLKSKGTLKQEHHEKINEAKAKWQNSWSDFMDALMYLERIEL
Ga0209585_1019950013300025891Arctic Peat SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVLMYLETLEI
Ga0207642_1007738833300025899Miscanthus RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDVLIYLETVEL
Ga0207654_1010603523300025911Corn RhizosphereMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL
Ga0207707_1117851523300025912Corn RhizosphereMEHTKELEDLNKKSLEKVDEYLKPKDKLDPEHHEKLNEAKSKWQSSWTDFMDVLMYLETLEL
Ga0207663_1079323713300025916Corn, Switchgrass And Miscanthus RhizosphereNYYGVILIKKMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL
Ga0207681_1022087223300025923Switchgrass RhizosphereMEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL
Ga0207686_1088589413300025934Miscanthus RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDVLLYLETVEL
Ga0207679_1042663123300025945Corn RhizosphereMEHAKELEELNKKSLEKIDEYLKTKENLGEEHHEKLNEAKKKWQSSWTDFMDILMYLETLEI
Ga0207667_1125376323300025949Corn RhizosphereNYDHSKNYYGVILIKKMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL
Ga0207712_1091071913300025961Switchgrass RhizosphereMEHKKLLEDLNIESLKKIEEYLKTKKNLPDEHREKLDKAKKNWQSSWTDLMDVLIVLERLEI
Ga0207640_1026241623300025981Corn RhizosphereMEHTKELEELNKKSLEKIDEYLKTKGNLGGEHHEKLNEAKKKWQSSWTDFMDILMYLETLEI
Ga0207640_1027489323300025981Corn RhizosphereLRLLENRARDEQVCLLCNFIQNTIMEHTKELDDLNKKSLQKLDDYLKTKENLREEHHEKLNDAKKKWQSSWTDFMDVLLYLETLEI
Ga0207639_1163241213300026041Corn RhizosphereDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTDFMNVLMYLETLEL
Ga0207702_1003463543300026078Corn RhizosphereMMEHTKELEDLNKKSLEKIDEFLKSKNNLDQDHHEKINEAKSKWQSSWTDFMNVLMYLETLEL
Ga0207641_1060376123300026088Switchgrass RhizosphereMEHKKELEDLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWADFMDVLMYLE
Ga0207648_1063623723300026089Miscanthus RhizosphereLNKKSLEKIDEYLKTKGNLDKEHHEKLHEAKRKWQSSWTDFMDVLMYLERLEL
Ga0207674_1141922923300026116Corn RhizosphereMEHTKELEDLNKKSLEKIDEFLKSKNNLDQEHHEKINEAKSKWQSSWTNFMNVLMYLETLEL
Ga0207698_1006346633300026142Corn RhizosphereVALILRNFNANHIAMEHKKELDKLHQKSLDKIDEYLSTKKNLSEEHHEKFKEAKKNWQSSWTDLMQVLMYLETLEI
Ga0209880_108895623300026271SoilMEHKKELEDLNKKSLEKFDEYLRTKANLDKEHHEKLNAAKNKWQSSWTDFMDVVMYLETLEI
Ga0209178_100142763300027725Agricultural SoilMEHKKQLEDLNKKSLEKIDEYLKTKDRLPQEHHEKVNDAKNKWQSAWVELMNTLMFLERLEI
Ga0209073_1002532123300027765Agricultural SoilMEIGSCENSFPVALILRNFIANQIAMEHKKELEELHKKSLDKIDALIDSKKNLTEDHHEKLKEAKKKWQDSWSGLMDVLMYLETLEI
Ga0209067_1023802623300027898WatershedsMEHTDELEELNKKSLEKIDAYIQSKGALDPEHAEKLNAAKSKWQASWTDFMDFLMYLETLEI
Ga0268264_1198159613300028381Switchgrass RhizosphereMEHKQLLEDLNKQSLEKIEEYLKTKKNLKNEHREKLHEAKTKWQSSWTDFMDILMYLETVEL
Ga0307374_1000861093300031670SoilMEHKKELDELNKKSLGKIDEYLKTKKNLGKEHHEKLNEAKNKWQSSWTELMDVLMYLETLEI
Ga0335071_1195617023300032897SoilMDHKEQLEELNKKSLEKINEYLKTKNNLETEHHEKVNEAKTKWQHAWADLMDVLMYLEN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.