NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100032

Metagenome Family F100032

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100032
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 62 residues
Representative Sequence MGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Number of Associated Samples 78
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 70.87 %
% of genes near scaffold ends (potentially truncated) 27.18 %
% of genes from short scaffolds (< 2000 bps) 85.44 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (95.146 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(38.835 % of family members)
Environment Ontology (ENVO) Unclassified
(50.485 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(74.757 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 0.00%    Coil/Unstructured: 77.78%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF03237Terminase_6N 6.80
PF03592Terminase_2 1.94
PF00166Cpn10 0.97
PF08401ArdcN 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 1.94
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.97
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.15 %
All OrganismsrootAll Organisms4.85 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10053767Not Available1742Open in IMG/M
3300000116|DelMOSpr2010_c10074631Not Available1365Open in IMG/M
3300000117|DelMOWin2010_c10019230Not Available3598Open in IMG/M
3300001419|JGI11705J14877_10070714All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300004097|Ga0055584_100813056Not Available978Open in IMG/M
3300005512|Ga0074648_1119943Not Available872Open in IMG/M
3300005512|Ga0074648_1221219Not Available515Open in IMG/M
3300006025|Ga0075474_10025981Not Available2087Open in IMG/M
3300006027|Ga0075462_10138702Not Available745Open in IMG/M
3300006027|Ga0075462_10199803Not Available601Open in IMG/M
3300006637|Ga0075461_10080888Not Available1032Open in IMG/M
3300006637|Ga0075461_10226579Not Available553Open in IMG/M
3300006802|Ga0070749_10452942Not Available703Open in IMG/M
3300006867|Ga0075476_10111859Not Available1043Open in IMG/M
3300006868|Ga0075481_10264260Not Available604Open in IMG/M
3300006919|Ga0070746_10165727Not Available1069Open in IMG/M
3300006919|Ga0070746_10500006Not Available534Open in IMG/M
3300007236|Ga0075463_10041179Not Available1504Open in IMG/M
3300007345|Ga0070752_1395823Not Available511Open in IMG/M
3300007538|Ga0099851_1068204All Organisms → Viruses → Predicted Viral1381Open in IMG/M
3300007538|Ga0099851_1304555Not Available562Open in IMG/M
3300007539|Ga0099849_1082683Not Available1297Open in IMG/M
3300007539|Ga0099849_1133547Not Available969Open in IMG/M
3300007540|Ga0099847_1054662Not Available1252Open in IMG/M
3300007541|Ga0099848_1182595Not Available761Open in IMG/M
3300007623|Ga0102948_1038370Not Available1554Open in IMG/M
3300007640|Ga0070751_1172084Not Available855Open in IMG/M
3300007725|Ga0102951_1124552Not Available727Open in IMG/M
3300007778|Ga0102954_1114195Not Available763Open in IMG/M
3300007778|Ga0102954_1159567Not Available650Open in IMG/M
3300007778|Ga0102954_1213871Not Available569Open in IMG/M
3300009000|Ga0102960_1040923Not Available1714Open in IMG/M
3300009000|Ga0102960_1373906Not Available503Open in IMG/M
3300009001|Ga0102963_1095730Not Available1211Open in IMG/M
3300009001|Ga0102963_1220950Not Available753Open in IMG/M
3300009027|Ga0102957_1021265Not Available2206Open in IMG/M
3300009124|Ga0118687_10243661Not Available665Open in IMG/M
3300009124|Ga0118687_10329030Not Available580Open in IMG/M
3300009529|Ga0114919_10737191Not Available670Open in IMG/M
3300010296|Ga0129348_1085030Not Available1122Open in IMG/M
3300010297|Ga0129345_1152252Not Available836Open in IMG/M
3300010316|Ga0136655_1031725Not Available1709Open in IMG/M
3300010316|Ga0136655_1270449Not Available505Open in IMG/M
3300010389|Ga0136549_10195968Not Available881Open in IMG/M
3300013010|Ga0129327_10115986Not Available1324Open in IMG/M
3300013010|Ga0129327_10310625Not Available818Open in IMG/M
3300013010|Ga0129327_10401100Not Available727Open in IMG/M
3300017950|Ga0181607_10004913Not Available11378Open in IMG/M
3300017951|Ga0181577_10017438Not Available5285Open in IMG/M
3300017971|Ga0180438_10671530Not Available763Open in IMG/M
3300017971|Ga0180438_11104110Not Available573Open in IMG/M
3300017991|Ga0180434_10647581Not Available804Open in IMG/M
3300018036|Ga0181600_10070655Not Available2152Open in IMG/M
3300018048|Ga0181606_10003567Not Available13141Open in IMG/M
3300018080|Ga0180433_10299213Not Available1269Open in IMG/M
3300018416|Ga0181553_10558256Not Available607Open in IMG/M
3300018421|Ga0181592_10970223Not Available549Open in IMG/M
3300018424|Ga0181591_10540163Not Available844Open in IMG/M
3300018428|Ga0181568_10613720Not Available857Open in IMG/M
3300019708|Ga0194016_1045392Not Available548Open in IMG/M
3300020379|Ga0211652_10212059Not Available592Open in IMG/M
3300021335|Ga0213867_1093152Not Available1087Open in IMG/M
3300021957|Ga0222717_10112476Not Available1693Open in IMG/M
3300021958|Ga0222718_10027844Not Available3820Open in IMG/M
3300021958|Ga0222718_10315056Not Available807Open in IMG/M
3300021958|Ga0222718_10399376Not Available687Open in IMG/M
3300021958|Ga0222718_10436338Not Available646Open in IMG/M
3300021959|Ga0222716_10041628Not Available3298Open in IMG/M
3300021960|Ga0222715_10040255Not Available3293Open in IMG/M
3300021960|Ga0222715_10111996Not Available1746Open in IMG/M
3300021960|Ga0222715_10283825Not Available947Open in IMG/M
3300021960|Ga0222715_10393237Not Available760Open in IMG/M
3300021961|Ga0222714_10295378Not Available890Open in IMG/M
3300021964|Ga0222719_10186066Not Available1433Open in IMG/M
3300021964|Ga0222719_10289231All Organisms → Viruses → Predicted Viral1068Open in IMG/M
3300022063|Ga0212029_1053953Not Available583Open in IMG/M
3300022065|Ga0212024_1052365Not Available717Open in IMG/M
3300022068|Ga0212021_1074119Not Available698Open in IMG/M
3300022167|Ga0212020_1058737Not Available651Open in IMG/M
3300022169|Ga0196903_1025334Not Available710Open in IMG/M
3300022183|Ga0196891_1020141Not Available1276Open in IMG/M
3300022187|Ga0196899_1183221Not Available563Open in IMG/M
3300022198|Ga0196905_1045435Not Available1265Open in IMG/M
3300022201|Ga0224503_10055257All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300022218|Ga0224502_10364439Not Available560Open in IMG/M
3300024433|Ga0209986_10412788Not Available613Open in IMG/M
3300025543|Ga0208303_1024212Not Available1684Open in IMG/M
3300025543|Ga0208303_1052004Not Available992Open in IMG/M
3300025543|Ga0208303_1091145Not Available659Open in IMG/M
3300025610|Ga0208149_1017535All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2074Open in IMG/M
3300025646|Ga0208161_1011674Not Available3621Open in IMG/M
3300025647|Ga0208160_1007694Not Available3784Open in IMG/M
3300025671|Ga0208898_1168319Not Available569Open in IMG/M
3300025695|Ga0209653_1087755Not Available1040Open in IMG/M
3300025759|Ga0208899_1082044Not Available1255Open in IMG/M
3300025769|Ga0208767_1211149Not Available642Open in IMG/M
3300025803|Ga0208425_1019619Not Available1803Open in IMG/M
3300025810|Ga0208543_1091326Not Available730Open in IMG/M
3300025828|Ga0208547_1133285Not Available726Open in IMG/M
3300025889|Ga0208644_1352058Not Available561Open in IMG/M
3300026097|Ga0209953_1021513Not Available1120Open in IMG/M
3300026138|Ga0209951_1009597Not Available2138Open in IMG/M
3300032047|Ga0315330_10013761Not Available5484Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous38.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water12.62%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.77%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.80%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water6.80%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water4.85%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment3.88%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.91%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.94%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.94%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.94%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment1.94%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.97%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.97%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.97%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.97%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.97%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.97%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300017991Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaGEnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022201Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21EnvironmentalOpen in IMG/M
3300022218Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1005376723300000116MarineMGILVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
DelMOSpr2010_1007463123300000116MarineMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
DelMOWin2010_1001923033300000117MarineMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKVRATV*
JGI11705J14877_1007071413300001419Saline Water And SedimentMGVAVDXXKEEFIGXGFSKKEAXXKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0055584_10081305623300004097Pelagic MarineMGVLVEQKKKEFISQGFPKKEATTKAHEWCKQTNTCRGCSKPVATSEWSNSYKGEGYCMGCM*
Ga0074648_111994313300005512Saline Water And SedimentMGILVEQKKEEFIGQGFSKKEARTKAHEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG*
Ga0074648_122121923300005512Saline Water And SedimentMGVAVDLKKEEFIGQGFSKKEARIKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0075474_1002598113300006025AqueousMGVLVDLKKEEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPDEWSKSF
Ga0075462_1013870223300006027AqueousMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
Ga0075462_1019980323300006027AqueousMGVLVDLKKEEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG*
Ga0075461_1008088813300006637AqueousMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0075461_1022657913300006637AqueousMGILVEQKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
Ga0070749_1045294213300006802AqueousMGVAVDLKKEEFIGQGFSKKEARTKAHEWCQQTNTCRGCSQAVKPDEWSKSFKGEGYCIKCMG*
Ga0075476_1011185923300006867AqueousMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG*
Ga0075481_1026426023300006868AqueousMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
Ga0070746_1016572713300006919AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
Ga0070746_1050000623300006919AqueousMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0075463_1004117933300007236AqueousMGILVDQKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG*
Ga0070752_139582313300007345AqueousIIMGVLVDLKKEEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG*
Ga0099851_106820433300007538AqueousMGVAVDLKKKEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG*
Ga0099851_130455513300007538AqueousMGVLVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEG
Ga0099849_108268323300007539AqueousMGVAVDLKKQEFIGQGFSKKEARIKAHEWCRQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0099849_113354743300007539AqueousMETIIMGTLVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGE
Ga0099847_105466213300007540AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYK
Ga0099848_118259533300007541AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGKGYCIGCMG*
Ga0102948_103837013300007623WaterMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPDQWSRSYKGEGYCVGCMG*
Ga0070751_117208413300007640AqueousMGILVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0102951_112455213300007725WaterMGVAVDLKKQEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG*
Ga0102954_111419523300007778WaterVDLKKEQFIGQGFSKKEARIKAHEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG*
Ga0102954_115956713300007778WaterMGVAVDLKKEEFIGQGFTKKEALTKAHEWCATTNTCRGCSQAVKPGEWSKSYKGEGYCIG
Ga0102954_121387113300007778WaterMGVAVDLKKEQFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0102960_104092313300009000Pond WaterMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSYRGEGYC
Ga0102960_137390613300009000Pond WaterMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDQWSKSYKGEGYCIGCMG*
Ga0102963_109573023300009001Pond WaterMGVAVDLKKEEFIGQGFTKKEALTKAHEWCATTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0102963_122095043300009001Pond WaterMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSF
Ga0102957_102126523300009027Pond WaterMGVAVDLKKEEFIGQGFSKKEARIKAHDWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIGCMG*
Ga0118687_1024366123300009124SedimentMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG*
Ga0118687_1032903013300009124SedimentMGVAVDLKKEEFIGQGFSKKEARIKALEWCQQTNTCRGCSQAVKPDQWSKSYKGEGYCVGCMG*
Ga0114919_1073719123300009529Deep SubsurfaceMGVLVEQKKKEFISQGFSKKEATTKAHEWCKQTNTCRGCSEPVATSEWSNSYKGEGYCMGCM*
Ga0129348_108503033300010296Freshwater To Marine Saline GradientMGVAVDLKKQEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0129345_115225213300010297Freshwater To Marine Saline GradientIMGVAVDLKKKEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG*
Ga0136655_103172513300010316Freshwater To Marine Saline GradientMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSFMGEGYCIG
Ga0136655_127044923300010316Freshwater To Marine Saline GradientMGVLVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0136549_1019596833300010389Marine Methane Seep SedimentMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVRPDEWSKSFKGEGYCIGCMG*
Ga0129327_1011598643300013010Freshwater To Marine Saline GradientMGVLVDLKKEEFIGQGFSKKEARTKAHEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0129327_1031062523300013010Freshwater To Marine Saline GradientDLKKKEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG*
Ga0129327_1040110013300013010Freshwater To Marine Saline GradientMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG*
Ga0181607_1000491373300017950Salt MarshMGTLVDLKKEEFIGKGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0181577_1001743823300017951Salt MarshMGILVEQKKEEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDQWSKSFKGEGYCIGCMG
Ga0180438_1067153013300017971Hypersaline Lake SedimentMGVVVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0180438_1110411013300017971Hypersaline Lake SedimentMGVAVDLKKQEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG
Ga0180434_1064758113300017991Hypersaline Lake SedimentMGVAVDLKKQEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG
Ga0181600_1007065513300018036Salt MarshMGTLVDLKKEEFIGKGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCM
Ga0181606_10003567153300018048Salt MarshMGTLDDLKKEEFIGKGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0180433_1029921333300018080Hypersaline Lake SedimentMGVLVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0181553_1055825613300018416Salt MarshMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG
Ga0181592_1097022323300018421Salt MarshMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0181591_1054016323300018424Salt MarshMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0181568_1061372023300018428Salt MarshMGTLVDLKKEEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDQWSKSFKGEGYCIGCMG
Ga0194016_104539213300019708SedimentMGVAVDLKKEEFIGQGFSKKEALTKAHEWCEQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0211652_1021205913300020379MarineMGVAVEKKKKEFIDLGFPKKEATIKAHEWCKLTNTCRGCSQPVATSEWSNSYKGEGYCMGCM
Ga0213867_109315213300021335SeawaterMGVAVDLKKEEFIGQGFTKKEALTKAHEWCQQTNTCRGCSQAVKPSEWSKSFKGEGYCIGCMG
Ga0222717_1011247653300021957Estuarine WaterMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG
Ga0222718_1002784453300021958Estuarine WaterMGVAVDLKKEEFIGLGFSKKEARIKAHEWCQQTNTCRGCSQVVRLDWWSKSYKGKGYCISCMG
Ga0222718_1031505633300021958Estuarine WaterMGVAVDLKKKEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG
Ga0222718_1039937623300021958Estuarine WaterEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG
Ga0222718_1043633813300021958Estuarine WaterMGVAVDLKKEEFIGQGFSKKEARIKALEWCQQTNTCRGCSQAVKPDQWSKSYKGEGYCIGCMG
Ga0222716_1004162843300021959Estuarine WaterMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPDEWSKSFKGEGYCIKCMG
Ga0222715_1004025513300021960Estuarine WaterMGVAVDLKKEEFIGQGFSKKEARIKALDWCRQTNTCRGCSQAVKPDQWSKSFRGEGYCIGCMG
Ga0222715_1011199633300021960Estuarine WaterMGVLVDIKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG
Ga0222715_1028382513300021960Estuarine WaterCLEDYLIMGLVVNKKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0222715_1039323713300021960Estuarine WaterMGVLVDIKKEEFIGQGFSKKEARTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIGCM
Ga0222714_1029537813300021961Estuarine WaterMGVAVDLKKEEFIGQGFSKKEALTKALDWCRQTNTCRGCSQAVKPDQWSKSFRGEGYCIGCMG
Ga0222719_1018606613300021964Estuarine WaterCSIMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG
Ga0222719_1028923113300021964Estuarine WaterMGVAVDLKKEEFIGQGFTKKEALTKAHEWCATTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG
Ga0212029_105395323300022063AqueousMGVAVDLKKKEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIKCMG
Ga0212024_105236523300022065AqueousMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0212021_107411913300022068AqueousMGVAVDLKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0212020_105873713300022167AqueousMGVAVDLKKEEFIGQGFSKKEARTKAHEWCQQTNTCRGCSQAVKPDEWSKSFKGEGYCIKCMG
Ga0196903_102533423300022169AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0196891_102014113300022183AqueousMGVLVDLKKEEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIKCMG
Ga0196899_118322123300022187AqueousMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSY
Ga0196905_104543533300022198AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEG
Ga0224503_1005525743300022201SedimentMGILVEQKKKEFISQGFPKKEATTKAHEWCKLTNTCRGCSKPVATSEWSNSYKGEG
Ga0224502_1036443933300022218SedimentMGLVVNKKKEEFIGQGFSKKEARIKAHEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0209986_1041278813300024433Deep SubsurfaceMGVLVEQKKKEFISQGFSKKEATTKAHEWCKQTNTCRGCSEPVATSEWSNSYKGEGYCMGCM
Ga0208303_102421223300025543AqueousMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0208303_105200413300025543AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCI
Ga0208303_109114523300025543AqueousMGVAVDLKKQEFIGQGFSKKEALTKAHEWCRQTNTCRGCSQAVKPGEWSKSFKGEGYCIGCMG
Ga0208149_101753513300025610AqueousMGVAVDLKKEEFIGQGFSKKEAKIKAHEWCQQTNTCRGCSQAVKPGEWSKSF
Ga0208161_101167483300025646AqueousMGVAVDLKKQEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGKGYCIGCMG
Ga0208160_100769413300025647AqueousMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKS
Ga0208898_116831923300025671AqueousAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0209653_108775533300025695MarineMGVAVDLKKEQFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCVGCMG
Ga0208899_108204413300025759AqueousMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPGEWSKSYKGEGYCIGCMG
Ga0208767_121114913300025769AqueousMGTLVDLKKEEFIGQGFSKKEARTKAHEWCQQTNTCRGCSQAVKPDEWSKSFRGEGYCIGCMG
Ga0208425_101961913300025803AqueousCSIMGVAVDLKKKEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0208543_109132613300025810AqueousMGILVDQKKEEFIGQGFSKKEARTKALEWCQQTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0208547_113328513300025828AqueousMGVAVDLKKEEFIGQGFSKKEALTKALEWCQQTNTCRGCSQAVKPDEWSKSY
Ga0208644_135205823300025889AqueousMGVAVDLKKQEFIGQGFSKKEARTKAHEWCATTNTCRGCSQAVKPDEWSKSYKGEGYCIGCMG
Ga0209953_102151313300026097Pond WaterMGVAVDLKKEEFIGQGFSKKEALTKAHEWCQQTNTCRGCSQAVKPGEWSKSFRGEGYCIGCMG
Ga0209951_100959723300026138Pond WaterMGVAVDLKKEEFIGQGFSKKEARIKAHDWCRQTNTCRGCSQAVKPDEWSKSFRGEGYCIGCMG
Ga0315330_1001376113300032047SeawaterMVQRSTRNLEAIIMGVAVEKKKKEFIDLGFPKKEATIKAHEWCKLTNTCRGCSQPVATSEWSNSYKGEGYCMGCM


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