Metagenome / Metatranscriptome Family F100026

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100026
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	100 residues
Representative Sequence	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKASVQKFKYSGMPASIKSGESIITLTNREAGEITHEFVLLALPS
Number of Associated Samples	69
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.02 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.816 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (45.631 % of family members)
Environment Ontology (ENVO)	Unclassified (43.689 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.75% β-sheet: 10.66% Coil/Unstructured: 74.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07883	Cupin_2	2.91
PF05598	DUF772	2.91
PF07592	DDE_Tnp_ISAZ013	2.91
PF13586	DDE_Tnp_1_2	0.97
PF00486	Trans_reg_C	0.97
PF02036	SCP2	0.97
PF13087	AAA_12	0.97
PF17042	NBD_C	0.97
PF00171	Aldedh	0.97
PF01979	Amidohydro_1	0.97
PF06736	TMEM175	0.97
PF09278	MerR-DNA-bind	0.97
PF00872	Transposase_mut	0.97
PF13602	ADH_zinc_N_2	0.97
PF00144	Beta-lactamase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.97
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.97
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.97
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.97
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.97
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.97
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.97
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
All Organisms	root	All Organisms	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
cellular organisms	root	All Organisms → cellular organisms	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.45 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.94 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.94 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.97 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.97 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.94 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.97 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.94 %
Alloactinosynnema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema	0.97 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.97 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.97 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.94 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.97 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.97 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.97 %
unclassified Alloactinosynnema	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.94 %
Alloactinosynnema sp. L-07	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema → Alloactinosynnema sp. L-07	0.97 %
Pseudonocardia sp. HH130630-07	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. HH130630-07	0.97 %
Nocardioides sp. S5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. S5	0.97 %
Kribbella sp. VKM Ac-2573	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2573	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100138174	Not Available	759	Open in IMG/M
3300004463\|Ga0063356_105627202	Not Available	538	Open in IMG/M
3300005562\|Ga0058697_10245742	Not Available	831	Open in IMG/M
3300005562\|Ga0058697_10285686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300009147\|Ga0114129_11578443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2573	804	Open in IMG/M
3300009789\|Ga0126307_11481611	Not Available	550	Open in IMG/M
3300009810\|Ga0105088_1111731	Not Available	514	Open in IMG/M
3300009837\|Ga0105058_1050694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	928	Open in IMG/M
3300009840\|Ga0126313_10071149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2500	Open in IMG/M
3300010036\|Ga0126305_10490621	Not Available	818	Open in IMG/M
3300010037\|Ga0126304_10316270	Not Available	1035	Open in IMG/M
3300010037\|Ga0126304_11023880	Not Available	563	Open in IMG/M
3300010042\|Ga0126314_10262520	Not Available	1227	Open in IMG/M
3300010042\|Ga0126314_11380906	Not Available	529	Open in IMG/M
3300012204\|Ga0137374_10224000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1599	Open in IMG/M
3300012355\|Ga0137369_10354377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1071	Open in IMG/M
3300012358\|Ga0137368_10257787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1201	Open in IMG/M
3300012360\|Ga0137375_10398962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300012360\|Ga0137375_10638083	Not Available	880	Open in IMG/M
3300012937\|Ga0162653_100020885	Not Available	881	Open in IMG/M
3300015265\|Ga0182005_1268577	Not Available	533	Open in IMG/M
3300017965\|Ga0190266_10281473	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300017997\|Ga0184610_1295589	Not Available	534	Open in IMG/M
3300018028\|Ga0184608_10203279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300018054\|Ga0184621_10283919	Not Available	585	Open in IMG/M
3300018066\|Ga0184617_1002150	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300018072\|Ga0184635_10114206	Not Available	1072	Open in IMG/M
3300018077\|Ga0184633_10169255	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300018078\|Ga0184612_10113491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1418	Open in IMG/M
3300018081\|Ga0184625_10040050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2324	Open in IMG/M
3300018466\|Ga0190268_10427356	Not Available	865	Open in IMG/M
3300018466\|Ga0190268_10754266	Not Available	727	Open in IMG/M
3300019875\|Ga0193701_1084456	Not Available	610	Open in IMG/M
3300020005\|Ga0193697_1143458	Not Available	536	Open in IMG/M
3300021078\|Ga0210381_10135459	Not Available	826	Open in IMG/M
3300021078\|Ga0210381_10283158	Not Available	595	Open in IMG/M
3300022195\|Ga0222625_1657749	Not Available	581	Open in IMG/M
3300022534\|Ga0224452_1024326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1709	Open in IMG/M
3300022694\|Ga0222623_10003187	All Organisms → cellular organisms → Bacteria	5684	Open in IMG/M
3300022694\|Ga0222623_10138877	Not Available	946	Open in IMG/M
3300022756\|Ga0222622_10197650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1332	Open in IMG/M
3300027577\|Ga0209874_1009190	Not Available	2933	Open in IMG/M
3300027750\|Ga0209461_10021396	Not Available	1175	Open in IMG/M
3300028705\|Ga0307276_10086083	Not Available	744	Open in IMG/M
3300028708\|Ga0307295_10168917	Not Available	612	Open in IMG/M
3300028711\|Ga0307293_10152160	Not Available	736	Open in IMG/M
3300028711\|Ga0307293_10196848	Not Available	641	Open in IMG/M
3300028721\|Ga0307315_10140214	Not Available	730	Open in IMG/M
3300028721\|Ga0307315_10300312	Not Available	509	Open in IMG/M
3300028744\|Ga0307318_10036891	Not Available	1604	Open in IMG/M
3300028744\|Ga0307318_10056338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema → Alloactinosynnema sp. L-07	1305	Open in IMG/M
3300028744\|Ga0307318_10102805	Not Available	967	Open in IMG/M
3300028744\|Ga0307318_10159611	Not Available	775	Open in IMG/M
3300028754\|Ga0307297_10167088	Not Available	757	Open in IMG/M
3300028771\|Ga0307320_10153721	Not Available	890	Open in IMG/M
3300028771\|Ga0307320_10280943	Not Available	659	Open in IMG/M
3300028778\|Ga0307288_10127303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	945	Open in IMG/M
3300028787\|Ga0307323_10107405	Not Available	1002	Open in IMG/M
3300028791\|Ga0307290_10059592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. HH130630-07	1380	Open in IMG/M
3300028791\|Ga0307290_10142842	Not Available	876	Open in IMG/M
3300028793\|Ga0307299_10273705	Not Available	634	Open in IMG/M
3300028810\|Ga0307294_10213900	Not Available	671	Open in IMG/M
3300028810\|Ga0307294_10329922	Not Available	560	Open in IMG/M
3300028811\|Ga0307292_10351131	Not Available	622	Open in IMG/M
3300028814\|Ga0307302_10168828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1063	Open in IMG/M
3300028814\|Ga0307302_10343080	Not Available	736	Open in IMG/M
3300028814\|Ga0307302_10430151	Not Available	653	Open in IMG/M
3300028814\|Ga0307302_10515517	Not Available	594	Open in IMG/M
3300028814\|Ga0307302_10546716	Not Available	575	Open in IMG/M
3300028819\|Ga0307296_10041382	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300028824\|Ga0307310_10640626	Not Available	543	Open in IMG/M
3300028828\|Ga0307312_10478599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300028828\|Ga0307312_10828409	Not Available	613	Open in IMG/M
3300028875\|Ga0307289_10122889	Not Available	1064	Open in IMG/M
3300028875\|Ga0307289_10232309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300028875\|Ga0307289_10479933	Not Available	511	Open in IMG/M
3300028876\|Ga0307286_10317575	Not Available	577	Open in IMG/M
3300028878\|Ga0307278_10258137	Not Available	773	Open in IMG/M
3300028878\|Ga0307278_10326619	All Organisms → cellular organisms → Bacteria → Terrabacteria group	677	Open in IMG/M
3300028878\|Ga0307278_10344019	Not Available	657	Open in IMG/M
3300028880\|Ga0307300_10118743	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300028880\|Ga0307300_10165987	Not Available	701	Open in IMG/M
3300028880\|Ga0307300_10193435	Not Available	656	Open in IMG/M
3300028885\|Ga0307304_10582792	Not Available	517	Open in IMG/M
3300030499\|Ga0268259_10022304	Not Available	1176	Open in IMG/M
3300030499\|Ga0268259_10062947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. S5	777	Open in IMG/M
3300030514\|Ga0268253_10065275	Not Available	990	Open in IMG/M
3300031082\|Ga0308192_1076544	Not Available	540	Open in IMG/M
3300031731\|Ga0307405_11581453	Not Available	578	Open in IMG/M
3300031911\|Ga0307412_10752505	Not Available	841	Open in IMG/M
3300031995\|Ga0307409_100239262	Not Available	1651	Open in IMG/M
3300031995\|Ga0307409_100861415	Not Available	917	Open in IMG/M
3300031995\|Ga0307409_101212037	Not Available	778	Open in IMG/M
3300032002\|Ga0307416_100240233	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300032002\|Ga0307416_100401545	Not Available	1408	Open in IMG/M
3300032002\|Ga0307416_101863994	Not Available	705	Open in IMG/M
3300032005\|Ga0307411_11306056	Not Available	661	Open in IMG/M
3300032126\|Ga0307415_100420712	Not Available	1146	Open in IMG/M
3300032126\|Ga0307415_101840684	Not Available	586	Open in IMG/M
3300032159\|Ga0268251_10062202	Not Available	1252	Open in IMG/M
3300032159\|Ga0268251_10109047	Not Available	997	Open in IMG/M
3300032159\|Ga0268251_10122510	Not Available	952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.67%
Host-Associated	Host-Associated	22.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.14%
Plants	Host-Associated → Plants	22.33%
Aquatic	Environmental → Aquatic	15.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.62%
Sediment	Environmental → Aquatic → Sediment	11.65%
Phylloplane	Host-Associated → Plants → Phylloplane	5.83%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.91%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.88%
Sand	Environmental → Terrestrial → Soil → Sand	2.91%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.91%
Loam	Environmental → Terrestrial → Soil → Loam	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	45.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.80%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.91%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1001381741	3300001431	Soil	MGWQPGSDGRRSRPVSLGLLWVAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPTTIKSGESIITLTNRESGEI
Ga0063356_1056272021	3300004463	Arabidopsis Thaliana Rhizosphere	MSWQPGNGGSRRHPGRLGALLLAVLVLAVAGCSKGKAEGAAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDI
Ga0058697_102457423	3300005562	Agave	MGWQPGNDGRRPRPVLLGVLWLAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEFVLLAL
Ga0058697_102856863	3300005562	Agave	MGWQPGNDGRRPRPVLLGVLWIAVVALALAGCAKGKAEGTAATPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEFVLLALPSGKS
Ga0114129_115784432	3300009147	Populus Rhizosphere	MACGEEVAMRWQPGDEGWRSRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKVSVQKFKYGGMPTTIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADA
Ga0126307_114816111	3300009789	Serpentine Soil	MGWQPGDDGWRPRPGWLGVLWIAVVALAVAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRES
Ga0105088_11117311	3300009810	Groundwater Sand	VLLIAVVALALAGCAKDEAQGQAASSAALPVYKASVQKFKYSGMPGSIKSGESIITLTNREAGEITHEFVLLALPSGKSTDDIVADAKKKGDKAEGDFLSFGEVAEVNTGSTHAGVFSLPPG
Ga0105058_10506941	3300009837	Groundwater Sand	MGWQPRSDGRRSRPGWFGVLWIAVVALALAGCAKEEAQGQAASSAGLPVYKASVQKFKYSGMPGSIKSGESIITLTNREAGAVTHEFVLLALPSGKSTDDIVADAKKKGDKAEGDFLSFGEVAEVNTGSTHAGVFSL
Ga0126313_100711491	3300009840	Serpentine Soil	VVTCGEEVAMGWQPGDDGRRPRPGWLGVLGIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEGDFLSFGEVADVDTGS
Ga0126305_104906211	3300010036	Serpentine Soil	VLLGVLWIAVVALVVAGCSKGEAKGEAASTAGLPVYKASVQKFKYSGMPTSIKAGESIITLTNRESGEIAHEFVLLALPSGKSASDI
Ga0126304_103162701	3300010037	Serpentine Soil	MGWQPGNDGPRRHPGRLGALLLAVLALALAGCSKEAKGQATSPAGLPVYKASVQKFKYSGMPATVKSGESIITLTNRESGEITHEFVLLGLPSGKSASDIAADAKKKGDKAEEDFLSFGEVAD
Ga0126304_110238801	3300010037	Serpentine Soil	VLLGVLWIAVVALVVAGCSKGEAKGEAASTAGLPVYKASVQKFKYSGMPTSIKAGESIITLTNRESGEIAHEFVLLALPSGKSASDIAADAKKKGDKAE
Ga0126314_102625201	3300010042	Serpentine Soil	MGWHPGNDGQRSRPGWVGVLWVAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEFVL
Ga0126314_113809061	3300010042	Serpentine Soil	MGWQPGDDGWRPRPGWLGVLWIAVVALAVAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGE
Ga0137374_102240001	3300012204	Vadose Zone Soil	MGWQPGEDGRRPRPGRLGVLLIAVVALALAGCSKGEAKGEAASSAGLPVYKASVQKFKYSGMPASVKSGESIITLTNREA
Ga0137369_103543773	3300012355	Vadose Zone Soil	MGWEPGSDGWRPRPGWFGVLLIAVVALALAGCSKDEAQGQAASSAALPVYKLSVQKFKYSGMPASVKAGESIITLTNREAGEI
Ga0137368_102577874	3300012358	Vadose Zone Soil	MGWEPGSDGWRPRPGWFGVLLIAVVALALAGCSKDEAQGQAASSAALPVYKLSVQKFKYSGMPASVKAGESIITLTNREAGEIAHEFVVLALPSGKTKDDIVAFFFNEAATAEVYFLSLCDAGDP
Ga0137375_103989623	3300012360	Vadose Zone Soil	VGPLAVLCLATAALALAGCSKGEDKGPAASGPAVYKVSVQKFKYSGMPTSIKSGEAIITLTNREAGPITHEFVLLALPSGKSKDDIVADAKKKGDKAEGDFLSFGEVAEVDTGSTHAGVFSLPPGN
Ga0137375_106380831	3300012360	Vadose Zone Soil	MGWQPGYHGPRARPAPLAVLCLATAALALAGCSKGESKGQAASGPTVYKVSVQKFKYSGMPTSIKSGESIITLTNREAGPITHEFVLLALPSGKSKDDIVADAKKKADKAEGTS*
Ga0162653_1000208851	3300012937	Soil	MACGEEVAMGWQPGDDGWRPRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADAKKKSDKAEEDFLSFGEVA
Ga0182005_12685771	3300015265	Rhizosphere	MSWQPGNGGSRRHPGRLGALLLAVLVLALAGCSKGKAEGAAASPAGLPVYKASVQKFKYSGMPTTIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGADAEEDFLSFGEVADVNTGSTHAGVFSL
Ga0190266_102814731	3300017965	Soil	MSWQPGNGGSRRHPGRLGVLLLAVLVLALAGCSKGKAEGAAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADAKTKGADAEEDFLSFGEVGDVNT
Ga0184610_12955891	3300017997	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESLITI
Ga0184608_102032792	3300018028	Groundwater Sediment	MGWQPGNGRSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKLSVQKFKYSGMPATLKS
Ga0184621_102839191	3300018054	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVLALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESLITITNREAGEITHEFVLLALPSGKSTDDIAAAAKKKGADAEEDFLSFGE
Ga0184617_10021505	3300018066	Groundwater Sediment	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSGKAAA
Ga0184635_101142061	3300018072	Groundwater Sediment	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKASVQKFKYSGMPASIKSGESIITLTNREAGEITHEFVLLALPS
Ga0184633_101692552	3300018077	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVLALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESLITITNREAGEITHEFVLLAL
Ga0184612_101134913	3300018078	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESL
Ga0184625_100400504	3300018081	Groundwater Sediment	MGWQPGDDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQATSSAALPVYKAAVQKFKYSGMPASIKSGESIVTLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEEDFLSFGEVA
Ga0190268_104273561	3300018466	Soil	MGWQPGDDGWRPRPRWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADAKKKGDKAEEDFLSFGEVGEVNTGSTHAGV
Ga0190268_107542662	3300018466	Soil	MGWQPGNDRRRPPPVLLGVLWIAVVALALAGCSKGKAEGTAASPAGLPVYKASVQKFKYSGMPESIKSGESIITLTNRESGEIT
Ga0184644_14100881	3300019269	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVLALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMP
Ga0193701_10844561	3300019875	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSAGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSGKAAADIAAD
Ga0193697_11434581	3300020005	Soil	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESLITITNREAGEITHEFVLLALPSGKAAADIAADAKKKGADAEEDFLSFGEVADVNT
Ga0210381_101354592	3300021078	Groundwater Sediment	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGADAEEDFL
Ga0210381_102831581	3300021078	Groundwater Sediment	MGWQPGNDGRRSRPGWLGVLWIAVVALALAGCSKGKAEGTAASSAGLPVYKASVQKFKYSGMPASIKSGESLITLTNREAGEITHEFVLLALPSGKAAADIAADAKKKGDKAEGDFL
Ga0222625_16577491	3300022195	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKAGESLITITNREAGEITHEFVLLALPSGKAAADIAA
Ga0224452_10243261	3300022534	Groundwater Sediment	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKSGESLITITNREAGEITHEFVLLALPSGKAAADIAADAKKKGADAEEDFLSFGEVAD
Ga0222623_100031879	3300022694	Groundwater Sediment	MGWQPGDDGRRPRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKASVQKFKYSGMPGSIKSGESIITLTNR
Ga0222623_101388771	3300022694	Groundwater Sediment	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKAGESIITLTNRESG
Ga0222622_101976501	3300022756	Groundwater Sediment	MGWQPGDDGWRPRPGWLGVLWIAMVALAAAGCAKDEAKGQATSSAALPVYKAAVQKFKYSGMPTSIKSGES
Ga0209874_10091902	3300027577	Groundwater Sand	MGWQPRSDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKASVQKFKYSGMPASIKAGESIITLTNREAGAVTHEFVLLALP
Ga0209461_100213963	3300027750	Agave	MGWQPGMDRRWPRPLLVVVWVAVVVLALAGCAKGQAKGTAAATSAGPAVYKVSVQKFKYSGMPASIKAGE
Ga0307276_100860832	3300028705	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSAGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSGKAAADIAADAKKKGDKAEGDFLSFGEVADVNT
Ga0307295_101689171	3300028708	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMPASIKSGESIVTLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEEDFLSFGEVADVNTG
Ga0307293_101521601	3300028711	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMPASIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGD
Ga0307293_101968481	3300028711	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKK
Ga0307315_101402142	3300028721	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKVSVQKFKYSGMPATLKSGESLITLTN
Ga0307315_103003121	3300028721	Soil	MGWQPGNGRSRRRPALLGAVWVAVVALALAGCSKGEAQGQAAGSAGMPVYKVSVQKFKYSGMPATIKSGESLITLTNRE
Ga0307318_100368911	3300028744	Soil	MGWQPGDDGWRPRSGWFGVLGIAVVALALAGCSKEAKGQATGSAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAAD
Ga0307318_100563383	3300028744	Soil	MGWQPGNDGRRSRPGWLGVLWIAVVALALAGCSKGKAEGTAASSAGLPVYKASVQKFKYSGMPASIKSGESLITLTNREAGEITHEFVLLALPSGKAAADIAADAKK
Ga0307318_101028051	3300028744	Soil	MSWQPGNDGWRPRLRWLGVLWIAVVGLALAGCSKGQAQGQEASTAGLPVYKLSVQKFKYSGMPASIKSGESI
Ga0307318_101596112	3300028744	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTIRESGEITHEFVLLALPSGKSTNDIAADAKKKGADAEED
Ga0307297_101670881	3300028754	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPSGKAAADIAAD
Ga0307320_101537211	3300028771	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGE
Ga0307320_102809431	3300028771	Soil	MGWQLGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKLSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSG
Ga0307288_101273031	3300028778	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSAGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSGKAAADI
Ga0307323_101074051	3300028787	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMPASIKSGESIITLTNRESGEITHEFV
Ga0307290_100595921	3300028791	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADANKK
Ga0307290_101428421	3300028791	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEEDFLSFGEVADVNTGST
Ga0307299_102737051	3300028793	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHE
Ga0307294_102139001	3300028810	Soil	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKAGESLITITNREAGEITHEFVLLALPSGKAAADIAADAKKKGADAEEDFLSFGE
Ga0307294_103299221	3300028810	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPSGKSTDDI
Ga0307292_103511312	3300028811	Soil	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKLSVQKFKYSGMPASIKS
Ga0307302_101688282	3300028814	Soil	MGWQPGDDGWRPRPGWLGVLWIAMVALAAAGCAKDEAKGQATSSAALPVYKAAVQKFKYSGMPTSIKSGESIVTLTNRESG
Ga0307302_103430801	3300028814	Soil	MGWQPADKGWRPHPGWLGVLWIAVVALALAGCSKGQAKGEEASTAGLPVYKASVQKFKYSGMPTSIKSGESI
Ga0307302_104301511	3300028814	Soil	MDWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKASVQKFKYSGMPASIKSGES
Ga0307302_105155171	3300028814	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHEFVLLGLPSGKAAADIAADAKKKGDKAEGDFLSFGEVADVDT
Ga0307302_105467161	3300028814	Soil	MSWQPGNDGWRPRFRWLGVLWIAVVGLALAGCSKGQAQGQEASTAGLPVYKLSVQKFKYSGMPASIKSGESIVTLTNREAGEITHEFVLLALPSGK
Ga0307296_100413821	3300028819	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAA
Ga0307310_106406261	3300028824	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEEDFLSFGEVADVN
Ga0307312_104785991	3300028828	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSTGLPVYKVSVQKFKYSGMPATLKSGESLITLTNREAGAITHE
Ga0307312_108284091	3300028828	Soil	MGWQPGNDGRRARPGPLAVLCLATAALALAGCSKGESKGQAASGQVVYKVSVQKFKYSGMPTSIKSGESIITLTNREAGPITHEFVLLALPSGKTKDDIVAAAKKKGDKAEGDFLSFGEVAEVD
Ga0307289_101228891	3300028875	Soil	MGWQPADDGWRPRPGWLGVLWIAVVALALAGCSKGQAKGEEASTAGLPVYKASVQKFKYSGMPTSLKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGDKAEEDFLSFGEVADVNTGSTHA
Ga0307289_102323091	3300028875	Soil	MGWQPGNGGSRRRPALLGAVWVAVVVLALAGCSKGEAQGQAASSAGLPVYKVSVQKFKYSGMPATLKSGESLITMTNREA
Ga0307289_104799331	3300028875	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGADAEEDFLSFGEVAEVNTGSTHAG
Ga0307286_103175751	3300028876	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLA
Ga0307278_102581371	3300028878	Soil	MGWQPGNDGRRPRPGWFGVLWIAVVALALAGCSKGEAQGQATSSAGLPVYRASVQKFKYSGMPASIKAGESIITLTNREAGEITHEFVLLALPSGKTAN
Ga0307278_103266191	3300028878	Soil	MGWQPGDDGRRPRPGWFGVLWIAVVALALAGCSKGEAQGQAEGSAGLPVYKASVQKFKYSGMPASIKSGESIITLTNREAGEITHEFVLLALPSGKST
Ga0307278_103440191	3300028878	Soil	MGWQPENDGWRSRPGRLAVLCLGTMALALAGCSKGEAKGAAAGEAGFPVYKVSVQKFKYGGMPASLKAGESVITLTNREAGPIAHEFVLLALPSGKSKDDIVA
Ga0307300_101187433	3300028880	Soil	MSWQPGNDGWRPRPGWLVLWIAVVALALAGCSKGEAQGQAASPAGLPVYKVSVQKFKYSGMPASIKSGESLITITNREAGEITHEFVLLALPSGK
Ga0307300_101659871	3300028880	Soil	MGWQPGNDGQRPRPGWVGVLWIAVVALALAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSG
Ga0307300_101934351	3300028880	Soil	MSWQPGNDGWRPRLRWLGVLWIAVVGLALAGCSKGQAQGQEASTAGLPVYKLSVQKFKYSGMPASIKSGESIVTLTNREAGEITHEFVLLALPSGKTKDDIVADAKKKADKAEEDFLSFGEVAEVNTGSTHA
Ga0307304_105827921	3300028885	Soil	MGWQPGNDGRRSRPGWFGVLWIAVVALALAGCSKGEAQGQAASSAGLPVYKAAVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPS
Ga0268259_100223043	3300030499	Agave	MGWQPGMDRRWPRPLLIVVWVAVVALALAGCAKGQAKGTAAATSAGPAVYKVSVQKFKYSGMPASIKAGE
Ga0268259_100629472	3300030499	Agave	MGWQLPGNDGRRPRPVLLGVLWLAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEFVLLALPSGKSASDIAADA
Ga0268253_100652751	3300030514	Agave	MGWQPGSDGRRSRPVLLGVLWVAVVALALAGCAKGQAKGTAATPAGPAVYKVAVQKFKYSGMPASVKAGESIIALTNRESGPITHEFVLLGLPSGKSASDIAADAKKKGADAEEDFLSFGEVADVNTGSTHAG
Ga0308192_10765441	3300031082	Soil	MGWQPGNEGRRSRPVLLGVLWIAVVALALAGCSKGQAKGEEASTAGLPVYKASVQKFKYSGMTASIKSGESIITLTNRESGEITHEFVLLALPSGKSTDDIVADAKKKGADAEEDFLSFGEVADVNTGSTHAG
Ga0307405_115814531	3300031731	Rhizosphere	MGWQPADEGWRPRPGWLGVLWIAVVALAVAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTN
Ga0307412_107525051	3300031911	Rhizosphere	MGWQPGDDGWRPRPGWLGVLWIAVVALAVAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTN
Ga0307409_1002392622	3300031995	Rhizosphere	MGWQPGNDGRRPRPVLLGVLWIAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEFVLLALPSGK
Ga0307409_1008614151	3300031995	Rhizosphere	MGWQPGDDGWRPRPGWLGVLWIAVVALALAGCGKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGE
Ga0307409_1012120371	3300031995	Rhizosphere	MGWQPGNDGGRLRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTTIKSGESIITLTNRESGEITHEFVLLALPSGKSTNDIAADAKKKGDKAEEDFLSFGEVADVNTGSTHAG
Ga0307416_1002402333	3300032002	Rhizosphere	MGWQPGDDGWRPRPGWLGVLWIAVVALAVAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITL
Ga0307416_1004015451	3300032002	Rhizosphere	MGWQPGNDGGRLRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTTIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADAKKKGDK
Ga0307416_1018639941	3300032002	Rhizosphere	MGWQPADEGWRPRPGWLGVLWIAVVALAVAGCSKGEAKGEAASPAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADAKKKGDKAEEDFLSFG
Ga0307411_113060561	3300032005	Rhizosphere	MGWQPGDDGWRPRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEI
Ga0307415_1004207121	3300032126	Rhizosphere	MGWQPGNDGRRPRPVWLGVLWIAVVALALARCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITH
Ga0307415_1018406841	3300032126	Rhizosphere	MGWQPGNDGGRLRPGWLGVLWIAVVALALAGCSKGQAKGQEASTAGLPVYKASVQKFKYSGMPTTIKSGESIITLTNRESGEITHEF
Ga0268251_100622021	3300032159	Agave	MGWQPGDEGRRSRPRWLGVLWIAVVALALAGCSKGQASGQETASTAGLPVYKASVQKFKYSGMPTSIKSGESIITLTNRESGEITHEFVLLALPSGKSANDIAADA
Ga0268251_101090472	3300032159	Agave	MGWQPGNDRGRPRPVLLVVLWVAVVALALAGCAKGQAKGAAATSAGPAVYKVSVQKFKYSGMPASVKAGESIIALTNRESGPITHEFVLLGLPSGKSASDIAADAKKKGDKAEEDFLSFGEVGEVDTGSTHA
Ga0268251_101225102	3300032159	Agave	MGWQPGNDGRRPRPVLLGVLWLAVVALALAGCAKGKAEGTAASPAGLPVYKASVQKFKYSGMPASIKAGESIITLTNRESGEITHEVVLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100026

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences