NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100021

Metagenome Family F100021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100021
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 108 residues
Representative Sequence VTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGVAVLLLTVVWTAGRALLSGRLGQDSLRRVLAALSRRRSFG
Number of Associated Samples 77
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.79 %
% of genes near scaffold ends (potentially truncated) 28.16 %
% of genes from short scaffolds (< 2000 bps) 72.82 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil
(18.447 % of family members)
Environment Ontology (ENVO) Unclassified
(49.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.340 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.76%    β-sheet: 0.00%    Coil/Unstructured: 53.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00072Response_reg 37.86
PF13185GAF_2 21.36
PF02954HTH_8 9.71
PF13492GAF_3 6.80
PF06314ADC 1.94
PF00561Abhydrolase_1 1.94
PF12697Abhydrolase_6 0.97
PF00296Bac_luciferase 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG4689Acetoacetate decarboxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.94
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101681684All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2346Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101681690All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2951Open in IMG/M
3300000955|JGI1027J12803_100848999All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium603Open in IMG/M
3300000955|JGI1027J12803_103155615All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium793Open in IMG/M
3300001431|F14TB_102091934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1481Open in IMG/M
3300004267|Ga0066396_10003324All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1609Open in IMG/M
3300004281|Ga0066397_10041136All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria797Open in IMG/M
3300004479|Ga0062595_101621767All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium604Open in IMG/M
3300004633|Ga0066395_10023678All Organisms → cellular organisms → Bacteria2475Open in IMG/M
3300004633|Ga0066395_10939635All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005176|Ga0066679_10407670All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium890Open in IMG/M
3300005177|Ga0066690_10098492All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300005180|Ga0066685_10058230All Organisms → cellular organisms → Bacteria2499Open in IMG/M
3300005186|Ga0066676_10663961All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium709Open in IMG/M
3300005187|Ga0066675_10144491All Organisms → cellular organisms → Bacteria1626Open in IMG/M
3300005330|Ga0070690_100212918All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1350Open in IMG/M
3300005332|Ga0066388_100067483All Organisms → cellular organisms → Bacteria → Proteobacteria3856Open in IMG/M
3300005332|Ga0066388_100094122All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3433Open in IMG/M
3300005336|Ga0070680_101577495All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium569Open in IMG/M
3300005440|Ga0070705_100054412All Organisms → cellular organisms → Bacteria2348Open in IMG/M
3300005558|Ga0066698_10305013All Organisms → cellular organisms → Bacteria → Proteobacteria1103Open in IMG/M
3300005615|Ga0070702_100790128All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium733Open in IMG/M
3300005764|Ga0066903_100104922All Organisms → cellular organisms → Bacteria → Proteobacteria3840Open in IMG/M
3300005764|Ga0066903_100949034All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300005841|Ga0068863_100833978All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium920Open in IMG/M
3300005983|Ga0081540_1069135All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1642Open in IMG/M
3300006034|Ga0066656_10203507All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300006049|Ga0075417_10002112All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria5844Open in IMG/M
3300006845|Ga0075421_100226858All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2299Open in IMG/M
3300006880|Ga0075429_100424764All Organisms → cellular organisms → Bacteria → Proteobacteria1164Open in IMG/M
3300007255|Ga0099791_10293763All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria774Open in IMG/M
3300009012|Ga0066710_100004623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria12248Open in IMG/M
3300009553|Ga0105249_10292773All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1630Open in IMG/M
3300009792|Ga0126374_10078003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis1800Open in IMG/M
3300009792|Ga0126374_10078259All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300010043|Ga0126380_10052047All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2218Open in IMG/M
3300010046|Ga0126384_10017129All Organisms → cellular organisms → Bacteria → Proteobacteria4624Open in IMG/M
3300010046|Ga0126384_10206429All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1559Open in IMG/M
3300010046|Ga0126384_10355760All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1222Open in IMG/M
3300010046|Ga0126384_11463346All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium639Open in IMG/M
3300010047|Ga0126382_10162711All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1544Open in IMG/M
3300010358|Ga0126370_10006993All Organisms → cellular organisms → Bacteria5796Open in IMG/M
3300010358|Ga0126370_10007719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5554Open in IMG/M
3300010358|Ga0126370_11416410All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium657Open in IMG/M
3300010362|Ga0126377_10217149All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1842Open in IMG/M
3300010362|Ga0126377_11037930All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium887Open in IMG/M
3300010366|Ga0126379_11231940All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium854Open in IMG/M
3300010376|Ga0126381_102414412All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria754Open in IMG/M
3300010397|Ga0134124_10041251All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3860Open in IMG/M
3300010398|Ga0126383_13409786All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria519Open in IMG/M
3300012189|Ga0137388_10043979All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3578Open in IMG/M
3300012362|Ga0137361_11288284All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium655Open in IMG/M
3300012582|Ga0137358_10328596All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1037Open in IMG/M
3300012685|Ga0137397_10088364All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2260Open in IMG/M
3300012922|Ga0137394_10404045All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1164Open in IMG/M
3300012930|Ga0137407_10024597All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4592Open in IMG/M
3300012948|Ga0126375_10142937All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1496Open in IMG/M
3300012948|Ga0126375_10756801All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria764Open in IMG/M
3300013308|Ga0157375_12940458All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium569Open in IMG/M
3300014326|Ga0157380_10107388All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2338Open in IMG/M
3300014969|Ga0157376_11994219All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium618Open in IMG/M
3300017939|Ga0187775_10009418All Organisms → cellular organisms → Bacteria → Proteobacteria2453Open in IMG/M
3300018064|Ga0187773_10638471All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria656Open in IMG/M
3300021560|Ga0126371_13188480All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria555Open in IMG/M
3300024317|Ga0247660_1077009All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300025961|Ga0207712_10217909All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1524Open in IMG/M
3300026285|Ga0209438_1040655All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1539Open in IMG/M
3300026310|Ga0209239_1194822All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium739Open in IMG/M
3300026333|Ga0209158_1051075All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales1690Open in IMG/M
3300026335|Ga0209804_1305737All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300026360|Ga0257173_1052743All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium579Open in IMG/M
3300026497|Ga0257164_1055734All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium640Open in IMG/M
3300026523|Ga0209808_1091605All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1294Open in IMG/M
3300026538|Ga0209056_10276554All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1176Open in IMG/M
3300026547|Ga0209156_10382209All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium594Open in IMG/M
3300027646|Ga0209466_1004735All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2847Open in IMG/M
3300027873|Ga0209814_10004105All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria5488Open in IMG/M
3300027874|Ga0209465_10336821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria756Open in IMG/M
3300027903|Ga0209488_10723475All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria711Open in IMG/M
3300027909|Ga0209382_10076596All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3946Open in IMG/M
3300028792|Ga0307504_10188703All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium723Open in IMG/M
(restricted) 3300031197|Ga0255310_10204832All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium552Open in IMG/M
3300031226|Ga0307497_10284560All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium752Open in IMG/M
3300031720|Ga0307469_10002855All Organisms → cellular organisms → Bacteria → Proteobacteria7107Open in IMG/M
3300031720|Ga0307469_10319030All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1289Open in IMG/M
3300031720|Ga0307469_10566223All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1009Open in IMG/M
3300031720|Ga0307469_11510062All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium643Open in IMG/M
3300031740|Ga0307468_100499024All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria964Open in IMG/M
3300031740|Ga0307468_100567157All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium918Open in IMG/M
3300031740|Ga0307468_100947561All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria751Open in IMG/M
3300031820|Ga0307473_10054594All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1914Open in IMG/M
3300031820|Ga0307473_10094449All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300032174|Ga0307470_10592117All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium827Open in IMG/M
3300032174|Ga0307470_10706656All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium769Open in IMG/M
3300032174|Ga0307470_11253951All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium605Open in IMG/M
3300032180|Ga0307471_100056285All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3284Open in IMG/M
3300032180|Ga0307471_100092525All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2710Open in IMG/M
3300032180|Ga0307471_101923589All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium740Open in IMG/M
3300032180|Ga0307471_102624067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium638Open in IMG/M
3300032180|Ga0307471_102652586All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium635Open in IMG/M
3300032205|Ga0307472_100040794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2802Open in IMG/M
3300032205|Ga0307472_100120388All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1854Open in IMG/M
3300033433|Ga0326726_11611804All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium632Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil18.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.97%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024317Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10168168413300000364SoilRRDRRAGDGRLQRERGGMRLAGQAACVLAGLLICLALTIGLAGSPPPAPKPSPAGGDDIPFPTWDVPTSDATSLGGHPRVQVTIVPEGVAVLLLTIIWTAGRALLSGWLEHVSSWRALVSASRRRSFG*
INPhiseqgaiiFebDRAFT_10168169023300000364SoilMTRRGQYACVLAGLLVCLALTVGFVGSPQPVRKAPISGGDDIPFPTRDIPTWDTKSSSARPRVPAAVVPEGVAVLLVMVAWTACRAVLSGRLGHHPVRRXLTTLSRRQSFG*
JGI1027J12803_10084899923300000955SoilDRRAGDGRLQRERGGMRLAGQAACVLAGLLICLALTIGLAGSPPPAPKPSPAGGDDIPFPTWDVPTSDATSLGGHPRVQVTIVPEGVAVLLLTIIWTAGRALLSGWLEHVSSWRALVSASRRRSFG*
JGI1027J12803_10315561513300000955SoilLGRLERNRQSMTVQGQYGCVLAAPLVCLALTIGFVGARPPAAKPAPAGGDDIAFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLGTLGRRQSFG*
F14TB_10209193423300001431SoilMTRRGQYACVLAGLLVCLALTVGFVGSPQLVRKAPISGGDDIPFPTRDIPTWDTGSSARPRVPAAVVPEGVAVLLVMVAWTACRAVLSGRLGHHPVRRMLTTLSRRQSFG*
Ga0066396_1000332413300004267Tropical Forest SoilAGVPAPVSKPAPAGGDDLPFPTRDVPTLDGKSLGAHPRGPAATVPEGVAVLLLTIMWTAGRALLSGRLGLDSFRRGAASLSHRRSFG*
Ga0066397_1004113623300004281Tropical Forest SoilVRPAGQAACVLAGLLICLALTLALAGPPQTAPKSSPAGGDDIPFPTWDVPASAASSPGGHPRVPATIVPEGVAVLLLTIIWTACRVLLSGWLAHLASWRALVSASRRRSFG*
Ga0062595_10162176713300004479SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTLGRRRSFG*
Ga0066395_1002367833300004633Tropical Forest SoilMRPAGQAACVLGGLLISLALAIPLAGPPKIAPKSSPAGPDDILFPAPDVPTAAATSPSGHPRTPSTIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0066395_1093963513300004633Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPAPASKPAPAGGDDLPFPTRDVPALDTKSLGAHPRGPAATVPEGLAVLLLTIIWTAGRALL
Ga0066679_1040767013300005176SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQDSLRRVLAAL
Ga0066690_1009849233300005177SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGVAVLLLTVVWTAGRALLSGRLGQDSLRRVLAALSRRRSFG*
Ga0066685_1005823033300005180SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQDSLRRVLAALSRRRSFG*
Ga0066676_1066396113300005186SoilMTVQGQYSCVLAALLVCLALTIGFVGAHPAAAKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTMGRRRSFG*
Ga0066675_1014449123300005187SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGRALLSGRLGQDSLRRVLAALSRRRSFG*
Ga0070690_10021291813300005330Switchgrass RhizosphereRNRQSMTVQGQYGCVLAALLVCLALAIGFVGAPPPAVKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTATVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTLGRRRSFG*
Ga0066388_10006748343300005332Tropical Forest SoilMRPAGQAACVLGGLLISLALTIPLAGPPKIAPKSSPAGPDDILFPTRDVPTAAATSPSGHPRTPATIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0066388_10009412223300005332Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPAPVSKPAPAGGDDLPFPTRDVPTLDGKSLGAHPRGPAATVPEGVAVLLLTIMWTAGRALLSGRLGLDSFRRVAASLSHRRSFG*
Ga0070680_10157749523300005336Corn RhizosphereVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRRRSFG*
Ga0070705_10005441223300005440Corn, Switchgrass And Miscanthus RhizosphereMTVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLPSKLGSSALRRTLTTLGRRRSFG*
Ga0066698_1030501313300005558SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQD
Ga0070702_10079012823300005615Corn, Switchgrass And Miscanthus RhizosphereMTVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGDDIPFPTWDVPTWDPKNSGARARVPTSTVPEGVAVLIATVVWTAGRTLLSGTLGPISLRRTLTFFGRRRSFG*
Ga0066903_10010492253300005764Tropical Forest SoilVTPRVQYVSVLAGLLVSLALTIGLAGSPLPVPRPARAGGDPTWDVPTPDAKSPRARPRRPASLVPEGVAVLLLTIIWTAYRALLSGRLGLDAFRRVVASPSHRRSFG*
Ga0066903_10094903423300005764Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPAPASKPAPAGGDDLPFPTRDVPALDTKSLGAHPRGPAATVPEGLAVLLLTIIWTAGRALLSGRLGLDTVRRAAASLSHRRSFG*
Ga0068863_10083397823300005841Switchgrass RhizosphereMTRRGQYGCVLAALLICLALTIGLVGAPPPAPRPAPAGGDDIPFPTWDVPTWDPKNSGARARVPTSTVPEGVAVLIATVVWTAGRTLLSGTLGPISLRRTLTFFGRRRSFG*
Ga0081540_106913523300005983Tabebuia Heterophylla RhizosphereMTRRGQYACVLAGLLICLVLTIGFVGAPHQVKKAQPAGGDDIPFPTWDVPVWDVKSSTPPSRGPASIVPEGVAVLLVTVIWTACRAVLSGRTGHQPMKRMLTSLGRRRSYG*
Ga0066656_1020350723300006034SoilVTRSGQYACVLGGLLVCLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGVAVLLLTVVWTAGRALLSGRPGQDSLRRVLAALSRRRSFG*
Ga0075417_1000211233300006049Populus RhizosphereMTRRGQYACVLAGLLICLALTIGFVGAPHPVKKAQPAGGDDIPFPTWDVPVGDVKSSTPPSRGPASIVPEGVAVLLVTVIWTACRAVLSGRTGHQPMKRMLTSLGRGRSYG*
Ga0075421_10022685823300006845Populus RhizosphereMTRRGQYACVLAGLLVCLALTVGFVGSPQPTRTAPISGGDDIPFPTQDVPTWDTKSSSARPRVPAAVVSEGVAVLLVMVVWTACRAVLSERLGHHPVRRMLTTLSRRRSFG*
Ga0075429_10042476433300006880Populus RhizosphereMTRRGQYACVLAGLLVCLALTVGFVGSPQPVRKAPISGGDDIPFPTRDIPTWDTKSSSARPRVPAAVVPEGVAVLLVMVAWTACRAVLSGRLGHHP
Ga0099791_1029376323300007255Vadose Zone SoilVTRSGQYACVLAGLLICLALTIGFAGSPPPVPKRPPAGGDDIPFPTSDVPTWDAKSSSARPRVPTTIVPEGVAVLLLAVIWTACRTLLSVRLAQGALRRFAATLSRRRSFG*
Ga0066710_10000462373300009012Grasslands SoilVTRSGQYACVLGGLLVCLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQDSLRRVLAALSRRRSFG
Ga0105249_1029277333300009553Switchgrass RhizosphereMTVQGQYGCVLAALLGCLVLTIGLVGALPPGAKPAPVGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRRRSFG*
Ga0126374_1007800313300009792Tropical Forest SoilMTPRLQYASVLAGLLICLVLTIGLAGSPSPVAKPAPAGGDDLPFPTWDVPTPETRSPGARPRVSAAIVPEGIAVLLLTIIWTACRALMSGRLGLDSFRRVVASLSHRRSFG*
Ga0126374_1007825933300009792Tropical Forest SoilAGLLISLALTVGLAGSPPPVPGPAPAWGDPTWDVPTLDAKSPVARPRVPASIVPEGVAVLFLTIIWTACRALLSGRLGLDAFRRVVASPSHRRSFG*
Ga0126380_1005204733300010043Tropical Forest SoilMRPAGQAACVLGGLLISLALTIPLAGPRKIAPKSSPAGPDDILFPMRDVPTAAATSPSGHPRTPATIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0126384_1001712953300010046Tropical Forest SoilMRPAGQAACVLGGLLISLALAIPLAGPPKIAPKSSPAGPDDILFPARDVPTAAATSPSGHPRTPSTIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0126384_1020642923300010046Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPTPVSKPAPAGGDDLPFPTRDVPTLDAKSLGAHPRGPAATVPEGVAVLLLTIMWTAGRALLSGRLGLDSFRRIAASLSHRRSFG*
Ga0126384_1035576023300010046Tropical Forest SoilVRPAGQAACVLAGLLICLALTLALAGPPQTAPKSSPAGGDDIPFPTWDVPASAAASPGGHPRVPATIVPEGVAVLLLTIIWTACRVLLSGWLAHLASWRALVSASRRRSFG*
Ga0126384_1146334623300010046Tropical Forest SoilLTARIQYASVLAGLLICLMLTIGLAGSPRPVPQPAPAGGDDLPFPAWDVPTQDAQSPGARPRVPAAIVPEGVAVLLLTIIWTACRALLSGRLGLDPLRRVLASLSHRRSFG*
Ga0126382_1016271123300010047Tropical Forest SoilMRPAGQAACVLAGLLICLALTLALAGQLQTAPKSSPAGGDDIPFPTWDVPASAAASPKGHPRVPATIVPEGVAVLLLTIIWTACRALLSGWLEHAASWRALVSASRRRSFG*
Ga0126370_1000699323300010358Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPAPVSKPAPAGGDDLPFPTRDVPTLDGKSLGAHPRGPAATVPEGVAVLLLTIMWTAGRALLSGRLGLDSFRRGAASLSHRRSFG*
Ga0126370_1000771963300010358Tropical Forest SoilMRPAGQAACVLGGLLISLALAIPLAGPPKIAPKSSPAGPDDILFPTRDVPTAAATSPSGHPRTPATIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0126370_1141641023300010358Tropical Forest SoilVQYVSVLAGLLISLALTIGLAGSPPPVPGPAPAWGDPTWDVPTLDAKSPVARPRVPASIVPEGVAVLLLTIIWTACRALLSGRLGLDAFRRVVASPSHRRSFG*
Ga0126377_1021714923300010362Tropical Forest SoilMRPAGQAACVLGGLLISLALAIPLAGPPKIAPKSSPAGPDDILFPARDVPTAAATSPSGHPRTPATIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRTLVSASRRRSFG*
Ga0126377_1103793033300010362Tropical Forest SoilVQYVSVLAGLLVSLALTIGLAGSPLPVPRPARAGGDPTWDVPTPDAKSPRARPRRPASLVPEGVAALLLTIIWTACRALLSGRLGLDAFRR
Ga0126379_1123194033300010366Tropical Forest SoilMTPRRQYTSVLAGLLVCLALTIGLAGSPSPVPKPAPAGGDDLRFPAWDVPTPDAKSPGARPRVPASIVPEGVAVLLLTIIWTACRALLSGRLGLDAFRRVVASPSHRRSFG*
Ga0126381_10241441223300010376Tropical Forest SoilGLLICLALTITLAGVPAPASKPAPAGGDDLPFPTRDVPALDTKSLGAHPRGPAATVPEGLAVLLLTIIWTAGRALLSGRLGLDTVRRAAASLSHRRSFG*
Ga0134124_1004125123300010397Terrestrial SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGDDIPFPTWYVPTWDPQSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLPSKLGSSALRRTLTTLGRRRSFG*
Ga0126383_1340978623300010398Tropical Forest SoilVQYVSVLAGLLVSLALTIGLAGSPLPVPRPARAGGDPTWDVPTPDAKSPRARPRRPASLVPEGVAVLLLTIIWTAYRALLSGRLGLDAFRRVVASPSHRRSFG*
Ga0137388_1004397953300012189Vadose Zone SoilMTRLGQYACVLAGLLVCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTWDAKSSSPRPRAPASIVPEGVAVLLVTVLWTAGRALLSGWRRHDSVRRVLTALSRPRSFG*
Ga0137361_1128828413300012362Vadose Zone SoilMTVQGQYSCVLAALLVCLALTIGFVGAHPAAAKPAPAGGDDIPFPTWDVPTWDPKSSSARQRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTMGRRRSFG*
Ga0137358_1032859623300012582Vadose Zone SoilMTVQGQYSCVLAALLVCLALTIGFVGAHPAAAKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTANVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTLGRQRSFG*
Ga0137397_1008836423300012685Vadose Zone SoilMTVQGQYSCVLAALLVCLALTIGFVGAHPAAAKPAPAGGDDIPFPTWDVPTWDPQSSSARQRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRALTTLGRRRSFG*
Ga0137394_1040404533300012922Vadose Zone SoilVTRSGQYACVLAGLLICLALTIGFVGSPSPVPKPPPAGGDDIPFPTWDVPTWDAKSSSARPRVPTTIIPEGVAVLLLTVIWTACRTLLSGRLAQGALRRFAATLSRRRSFG*
Ga0137407_1002459733300012930Vadose Zone SoilVTRSGQYACVLAGLLICLALTIGFAGSPPPVPKRPPAGGDDIPFPTWDVPTWDAKSSSARPRVPTTIVPEGVAVLLLAVIWTACRTLLSVRLAQGALRRFAATLSRRRSFG*
Ga0126375_1014293733300012948Tropical Forest SoilVRPAGQAACVLAGLLICLALTLALAGPPQTAPKSSLAGGDDIPFPTWDVPASAASSPGGHPRVPATIVPEGVAVLLLTIIWTACRVLLSGWLAHLAS
Ga0126375_1075680113300012948Tropical Forest SoilAPVSKPAPAGGDDLPFPTRDVPTLDGKSLGAHPRGPAATVPEGVAVLLLTIMWTAGRALLSGRLGLDSFRRVAASLSHRRSFG*
Ga0157375_1294045813300013308Miscanthus RhizosphereMTVQGQYGCVLAALLVCLALTIGFVGAPPPAVKPAPAGGVDIPFPTWDVPTWDPKSSGARARVPTSTVPEGVAVLIATVVWTAGRTLLSGTLGPSSLRRTLTF
Ga0157380_1010738823300014326Switchgrass RhizosphereMTVQGQYGCVLAALLVCLVLTIGLVGAPPPGAKPAPVGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTLGRRRSFG*
Ga0157376_1199421923300014969Miscanthus RhizosphereMTRRGQYGCVLAALLICLALTIGLVGAPPPAPRPAPAGGDDIPFPTWDVPTWDPKNSGARARVPTSTVPEGVAVLIATVVWTAGRTLLSGTLGPSSLRRTLTFFGRRRSFG*
Ga0187775_1000941833300017939Tropical PeatlandMTLRGQYACVLAALLICLALTIGLVGSPRSTPRRSPAWGDDIPLSTRDVQAWDPKSSSARPRVPNSIVPEGVAVLILTVVWTAGRLVLPIELGLGALRRPVVSFGRRRSFG
Ga0187773_1063847123300018064Tropical PeatlandMTLRGQYACVLAALLVCLAVTIGLVGAPRSAPRPSLAGEEEIPFGTRDVQAWDRKSSSARPRVPTSIVPEGVAVLVLTVVWTAGRLVLPSKLGLGALRRPLVFFGRRRSFG
Ga0126371_1318848023300021560Tropical Forest SoilLAIPLAGPPKIGPKSSPAGPDDIMFLAWDVPTAAATSPGGHPRTPATIVPEGVAVLLLTIIWTACRALLSGWLEHVASWRALVSASRRRSFG
Ga0247660_107700923300024317SoilMTRRGQYGCVLAALLICLALTIGLVGAPPPAPRPAPAGGDDIPFPTWDVPTWDPKNSGARARVPTSTVPEGVAVLIATVVWTAGRTLLSGTLGPSSLRRTLTFFGRRRSFG
Ga0207712_1021790923300025961Switchgrass RhizosphereMTVQGQYGCVLAALLGCLVLTIGLVGALPPGAKPAPVGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRRRSFG
Ga0209438_104065513300026285Grasslands SoilCLALTLGFVGAHPAAAKLAPAGGDDIPFVPEGVAVLLVTVVWTAGRALLSSKLGSSALRRTLTTLGRRRSFG
Ga0209239_119482223300026310Grasslands SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGVAVLLLTVVWTAGRALLSGRLGQDSL
Ga0209158_105107513300026333SoilMTRRGQYACVLAGLLICLALTLGFVGSPQPARKAQPAGGDDIPFPTWDAPSPRPRVPASMVPEGVAVLLVTVIWTACRTLLSGRLGHHPMRRV
Ga0209804_130573723300026335SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGVAVLLLTVVWTAGRALLSGRLGQDSLRRVLAALSRRRSFG
Ga0257173_105274323300026360SoilMTRRRQYACVLAGLLVCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTRDTKSSSPRPRAPASTVPEGVAVLLVTVIWTAGRAILSGWRGHDSGRRVLTALSRPRSFG
Ga0257164_105573413300026497SoilMTRRRQYACVLAGLLVCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTRDTKSSSPRPRAPASTVPEGVAVLLVTVIWTAGRAILSGQRGHDSGRRVLTA
Ga0209808_109160523300026523SoilVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQDSLRRVLAALSRRRSFG
Ga0209056_1027655423300026538SoilRRERADVTRSGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGCALLSGRLGQDSLRRVLAALSRRRSFG
Ga0209156_1038220923300026547SoilGQYACVLGGLLICLALTIGFVGSPPPVPKPSPAGGDDIPFPTWDVPTWDAKSSSARPRVPATIVPEGMAVLLLTVVWTAGRALLSGRLGQDSLRRVLAALSRRRSFG
Ga0209466_100473533300027646Tropical Forest SoilVRPAGQAACVLAGLLICLALTLALAGPPQTAPKSSPAGGDDIPFPTWDVPASAASSPGGHPRVPATIVPEGVAVLLLTIIWTACRVLLSGWLAHLASWRALVSASRRRSFG
Ga0209814_1000410533300027873Populus RhizosphereMTRRGQYACVLAGLLICLALTIGFVGAPHPVKKAQPAGGDDIPFPTWDVPVGDVKSSTPPSRGPASIVPEGVAVLLVTVIWTACRAVLSGRTGHQPMKRMLTSLGRGRSYG
Ga0209465_1033682123300027874Tropical Forest SoilMTPRAQYASVLAGLLICLALTITLAGVPAPASKPAPAGGDDLPFPTRDVPALDTKSLGAHPRGPAATVPEGLAVLLLTIIWTAYRALLSGRLGLDAFRRVVASPSHRRSFG
Ga0209488_1072347523300027903Vadose Zone SoilMTRLGQYACVLAGLLVCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTWDAKSSSPRPRAPASIVPDGVAVLLVTVLWTAGRALLSGWRRHDSVRRVLTALSRPRSFG
Ga0209382_1007659623300027909Populus RhizosphereMTRRGQYACVLAGLLVCLALTVGFVGSPQPTRTAPISGGDDIPFPTQDVPTWDTKSSSARPRVPAAVVSEGVAVLLVMVVWTACRAVLSERLGHHPVRRMLTTLSRRRSFG
Ga0307504_1018870323300028792SoilMTRRRQYACVLAGLLVCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTWDAKSSSPRPRTPASIVPEGVAVLLVTVIWTAGRALLSGWRGHDSVRRVLMALSRPRSFG
(restricted) Ga0255310_1020483213300031197Sandy SoilCLALTGRLVGSPEPVRKAAPAGGDDIPFPTWDVPTWDAKSSSPRPRTPASIVPEGVAVLLVTVIWTAGRALLSGWRGHDSVRRVLMALSRPRSFG
Ga0307497_1028456023300031226SoilMTVQRQYGCVLAALLVCLVLTIGLVGAPPPAAKPAPAGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAALLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRRRSFG
Ga0307469_1000285523300031720Hardwood Forest SoilMTRGGQDACVLAGLLICLALTIGLAGSPPRAPKPSPAGGDDIPFPTWDVPTRDATSASAHPRVPPTIVPEGVAVLLLTVVLTACHALLSGWLGQDSLRRALAALSRRRSFG
Ga0307469_1031903023300031720Hardwood Forest SoilMTVQGQYGCVLAALLICLALTIGFVGAPPPAAKPAPAGGAEIPFPTWDVPTWDPKSSSARPTATVPEGVAVLIVTVVWTAGRALLSSTLGSSALRRTLPTLGRRRSFG
Ga0307469_1056622323300031720Hardwood Forest SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAAKPAPAAGDDIPFPTRDVSTWDPKSSIARQLVPTAIVPEGVAVLLVTVVWTAGRALLSRKLGSGALRRTLTTLGRRRSFG
Ga0307469_1151006223300031720Hardwood Forest SoilMTRRGQHACVLAGLLICLALAIGFVGSPHPVRKTQPAGGDDIPFPTWDVPIWEAKTSSPRPRVPASMVPEGVAVLLVTVIWTACRALLSGRLGHHPMRRALTTL
Ga0307468_10049902423300031740Hardwood Forest SoilMTVQGQYGCVLAALLVSLVLTIGLVGAPPPGAKPAPVGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRRRSFG
Ga0307468_10056715723300031740Hardwood Forest SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAAKPAPAGGDDIPFPTWDVPTWDPKSSSAKPRVPTAIVPEGVAVLLVTVAWTAGRALLSSKLGSSALRRTLTTRGRRRSFG
Ga0307468_10094756123300031740Hardwood Forest SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAAKPAPAGGAEIPFPTWDVPTWDPKSSSARPTATVPEGVAVLIVTVVWTAGRALLSSTLGSSALRRTLPTLGRRRSFG
Ga0307473_1005459423300031820Hardwood Forest SoilMTRGGQDACVLAGLLICLALTIGLAGSPPRAPKPSPAGGDDIPFPTWDVPTRDATSASAHPRVPATIVPEGVAVLLLTVVLTACHALLSGWLGQDSLRRALAALSRRRSFG
Ga0307473_1009444923300031820Hardwood Forest SoilMRLAGQAACVLAGLLICLALTIGLAGSPPPAPKPSPAGGDDIPFPTWDVPTSDATSLGGHPRVQVTIVPEGVAVLLLTIIWTAGRALLSGWLEHVSSWRALVSASRRRSFG
Ga0307470_1059211713300032174Hardwood Forest SoilMTVQGQYGCVLAALLVCLVLTIGLVGAPPPGAKPAPVGGDDIPFPTWDVPTWDPKSSSARPRVPTAIVPEGVAVLLVTVVWTAGRALLSSKLGSGAPRRTLTTLGRR
Ga0307470_1070665623300032174Hardwood Forest SoilTVQGQYGCVLAALLVCLALTIGFVGAPPPAAKPAPAGGAEIPFPTWDVPTWDPKSSSARPTATVPEGVAVLIVTVVWTAGRALLSSTLGSSALRRTLPTLGRRRSFG
Ga0307470_1125395113300032174Hardwood Forest SoilVTRSGQYACVLAGLLLCLALTIGFVGSPPPVPKPAPAGGDDIPFPTWDVPTWDAKSSSARPRVPTTIVPEGVAVLLLTVIWTACRTLLSGRLALGALRRFAATLSRRRSFG
Ga0307471_10005628533300032180Hardwood Forest SoilMTRGGQDACVLAGLLICLALTIGLAGSPPRAPKPSPAGGDDIPFPTWDVPTRDATSSSAHPRVPATIVPEGVAVLLLTVIWTACRALLAGWLGQDSLRGALAALSRRRSFG
Ga0307471_10009252523300032180Hardwood Forest SoilMRRGGQEAWVFAGLLICLALTIGFAGSPPPAPKPSPAGGDDIPFPTWDVPRWDPKSSSAHPRATATIVPEGVAVLLLAVIWTACRALLSGWVGPVALRHVLATLGRRRSFG
Ga0307471_10192358913300032180Hardwood Forest SoilAGLLLCLALTIGFVGSAPPVPKPPPAGGDDIPFPTWDVPTWDAKSSSARPRVPTTIIPEGVAVLLLTVIWTACRTLLSGRLALGALRRFAATLSRRRSFG
Ga0307471_10262406723300032180Hardwood Forest SoilMRLAGQAACVLAGLLICLALTIGLAGSPPPAPKPSPAGGDDIPFPTWDVPTSDATSLGGHPRVQVTIVPEGVAVLLLTIIWTAGRALLSGWLEHVSPWRALVSASRRRSFG
Ga0307471_10265258623300032180Hardwood Forest SoilMTVQGQYGCVLAALLVCLALTIGFVGAPPPAAKPAPAEGDEIPFPTWDVPTWDPKSSSARPTATVPEGVAVLIVTVVWTAGRALLSSTLGSSALRRTLPTLGRRRSFG
Ga0307472_10004079443300032205Hardwood Forest SoilMRLAGQAACVLAGLLICLALTIGLAGSPPPAPKPSPAGGDDIPFPTWDVPTSDATSLGGHPRVQVTIVPEGVAVLLLTIIWTAGRALLSGWLEHVSPWRALVS
Ga0307472_10012038823300032205Hardwood Forest SoilVTRSGQYACVLAGLLLCLALTIGFVGSPPPVPKPAPAGGDDIPFPTWDVPTWDAKSSSARPRVPTTIIPEGVAVLLLTVIWTACRTLLSGRLAQGALRRFAATLSRRRSFG
Ga0326726_1161180423300033433Peat SoilMTRQGQYGCVLAALLACLALTNGLVGGAPPAPEPAPAGGDDIPFPTWDVPTWDPESSSARPRVPTAVVPEGVAVLVVIVIWTAGRALLSGQLGSSTLRRTLATLGRRRSFG


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