Metagenome Family F099965

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099965
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	73 residues
Representative Sequence	SWAQYPVTETFQLENDPVENARAAYVVRFRDLRYDYPGRNARATLGAMVFLTRDLQVVEERFGMRSSSTKTR
Number of Associated Samples	91
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.91 %
% of genes near scaffold ends (potentially truncated)	97.09 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (20.388 % of family members)
Environment Ontology (ENVO)	Unclassified (51.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (41.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.00% Coil/Unstructured: 64.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07366	SnoaL	15.53
PF07978	NIPSNAP	10.68
PF09335	SNARE_assoc	4.85
PF13561	adh_short_C2	2.91
PF00797	Acetyltransf_2	2.91
PF09624	DUF2393	1.94
PF14079	DUF4260	0.97
PF03331	LpxC	0.97
PF13302	Acetyltransf_3	0.97
PF00994	MoCF_biosynth	0.97
PF01384	PHO4	0.97
PF01479	S4	0.97
PF01266	DAO	0.97
PF07676	PD40	0.97
PF04138	GtrA	0.97
PF00440	TetR_N	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	4.85
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	4.85
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	4.85
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.91
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.97
COG0774	UDP-3-O-acyl-N-acetylglucosamine deacetylase	Cell wall/membrane/envelope biogenesis [M]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.36 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.36 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	6.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.97 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.36 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	6.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.85 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.97 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10028879	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300004080\|Ga0062385_10979147	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300004091\|Ga0062387_101582357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300004152\|Ga0062386_101843068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005167\|Ga0066672_10300416	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005518\|Ga0070699_100440368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1181	Open in IMG/M
3300006052\|Ga0075029_100320964	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006055\|Ga0097691_1054593	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300006059\|Ga0075017_100285292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1216	Open in IMG/M
3300006086\|Ga0075019_10484038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	766	Open in IMG/M
3300006162\|Ga0075030_100833660	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006162\|Ga0075030_100944129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	680	Open in IMG/M
3300009029\|Ga0066793_10168343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300009029\|Ga0066793_10506602	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009038\|Ga0099829_10161404	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300009038\|Ga0099829_10353772	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300009525\|Ga0116220_10079461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1381	Open in IMG/M
3300009636\|Ga0116112_1008086	All Organisms → cellular organisms → Bacteria	4476	Open in IMG/M
3300009636\|Ga0116112_1231544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009644\|Ga0116121_1277731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	538	Open in IMG/M
3300009683\|Ga0116224_10620377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009700\|Ga0116217_10573382	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010339\|Ga0074046_10292529	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300012357\|Ga0137384_10562921	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300012363\|Ga0137390_10603596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1065	Open in IMG/M
3300012582\|Ga0137358_10811932	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300012917\|Ga0137395_10533110	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012923\|Ga0137359_11415188	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300014153\|Ga0181527_1082457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1571	Open in IMG/M
3300014155\|Ga0181524_10068495	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300014159\|Ga0181530_10349670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	763	Open in IMG/M
3300014169\|Ga0181531_10367629	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300014199\|Ga0181535_10244867	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300014200\|Ga0181526_11077658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300014498\|Ga0182019_10356702	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300014502\|Ga0182021_10351665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1742	Open in IMG/M
3300014502\|Ga0182021_11185094	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300014638\|Ga0181536_10078601	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300014638\|Ga0181536_10295616	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300014657\|Ga0181522_10570011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300015193\|Ga0167668_1004540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3076	Open in IMG/M
3300017823\|Ga0187818_10081541	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300017925\|Ga0187856_1283322	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300017925\|Ga0187856_1298155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300017929\|Ga0187849_1164479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	886	Open in IMG/M
3300017931\|Ga0187877_1197251	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300017933\|Ga0187801_10434706	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300017935\|Ga0187848_10093362	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300017948\|Ga0187847_10324330	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300017972\|Ga0187781_10907319	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300017995\|Ga0187816_10147003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1020	Open in IMG/M
3300018005\|Ga0187878_1306366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	567	Open in IMG/M
3300018006\|Ga0187804_10269362	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300018007\|Ga0187805_10081448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1458	Open in IMG/M
3300018009\|Ga0187884_10097147	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300018013\|Ga0187873_1157705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300018013\|Ga0187873_1200413	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300018017\|Ga0187872_10187533	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300018019\|Ga0187874_10153447	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300018023\|Ga0187889_10249411	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300018024\|Ga0187881_10398124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300018025\|Ga0187885_10067067	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300018025\|Ga0187885_10500795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300018026\|Ga0187857_10050560	All Organisms → cellular organisms → Bacteria	2133	Open in IMG/M
3300018030\|Ga0187869_10568194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300018040\|Ga0187862_10639315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300018040\|Ga0187862_10677289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018040\|Ga0187862_10902617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300018062\|Ga0187784_10604454	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300018090\|Ga0187770_11284623	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300021478\|Ga0210402_11144601	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300025432\|Ga0208821_1037563	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300025442\|Ga0208034_1091081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300025444\|Ga0208189_1040934	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300025507\|Ga0208188_1042608	Not Available	1177	Open in IMG/M
3300025579\|Ga0207927_1116217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300026318\|Ga0209471_1140655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1008	Open in IMG/M
3300026514\|Ga0257168_1064583	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300027568\|Ga0208042_1026240	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300027591\|Ga0209733_1013497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2175	Open in IMG/M
3300027629\|Ga0209422_1020268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1653	Open in IMG/M
3300027674\|Ga0209118_1013497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2721	Open in IMG/M
3300027684\|Ga0209626_1187776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300027738\|Ga0208989_10024017	All Organisms → cellular organisms → Bacteria → Acidobacteria	2102	Open in IMG/M
3300027783\|Ga0209448_10285175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300027846\|Ga0209180_10223169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1086	Open in IMG/M
3300028747\|Ga0302219_10161417	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300028773\|Ga0302234_10472083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300028800\|Ga0265338_10969507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300028906\|Ga0308309_10019517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	4447	Open in IMG/M
3300029889\|Ga0246001_1014989	All Organisms → cellular organisms → Bacteria → Acidobacteria	2501	Open in IMG/M
3300029889\|Ga0246001_1016282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2349	Open in IMG/M
3300029910\|Ga0311369_10401525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1190	Open in IMG/M
3300029999\|Ga0311339_11798374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300030053\|Ga0302177_10232886	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300030058\|Ga0302179_10241241	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300030707\|Ga0310038_10069368	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300031234\|Ga0302325_12707176	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031247\|Ga0265340_10296072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	718	Open in IMG/M
3300031261\|Ga0302140_10001701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28820	Open in IMG/M
3300031525\|Ga0302326_11687747	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300033561\|Ga0371490_1052639	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300033819\|Ga0334816_025497	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.51%
Terrestrial	Environmental → Terrestrial	48.54%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	44.66%
Soil	Environmental → Terrestrial → Soil	35.92%
Peat	Environmental → Terrestrial → Peat	12.62%
Sediment	Environmental → Aquatic → Sediment	4.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	44.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.74%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	33.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	20.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100288794	3300001546	Forest Soil	ITETEELASDPVDNARPAYVVRFRDLRYDYPERRGRATLGAFVLLTRDLRVVEGEMGTGGAK*
Ga0062385_109791471	3300004080	Bog Forest Soil	RVYLSWAEYPLTETEDLAHDPTENNRAAYVVRFRDLRYAYPGSLARGSLSASVLLTRDLRVVDERFGMRSANAK*
Ga0062387_1015823572	3300004091	Bog Forest Soil	QYPLIETEQLESDPVDHTRAAYVVRFRDLRYDYPGRSGRATLGAKVFLNRDLQVVKNGLE
Ga0062386_1018430681	3300004152	Bog Forest Soil	RVYLSWAQYPVTETEELADRGSGNARAAYVVRFRDLRYDYPGHDARGTLAAIVVLTRDLQVVDERFGLRSTDTK*
Ga0066672_103004163	3300005167	Soil	VTETEQLLSDPANKGPASNSRAAYIVHFRDLRYDFPGRNARVTLGAMVFLTRDLQVVEERFGMRSTNSNAK*
Ga0070699_1004403683	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LGRVYLSWAQYPVTETEQLVSDPANTGPLSNGRAAYVVHFRDLRYEYPGRNARVTLGAMVFLTRDLQLVEERFGMRSANSNAK*
Ga0075029_1003209643	3300006052	Watersheds	LGQVYLSWAQYPVTETEHLESGRAAYVVRFRDLRYAYPGRDARAMLGARVILSRDLQVLSEQFGMRSSGAGNPEQK*
Ga0097691_10545933	3300006055	Arctic Peat Soil	PVTETEQLANDPVENPHAAYLVRFRDLRYDYPGRSAPPTLGAVVILTRDLQVVEERFGMRGASTKNRLQR*
Ga0075017_1002852923	3300006059	Watersheds	VYLSWAQYPIAETEELTNNTVASARAAYVVRFRDLRYEYPGRAARVTLSGMVLLTRDLQVVDERFGAKSAIAGTR*
Ga0075019_104840382	3300006086	Watersheds	LGRVYLSWAQYPITETEQLENEPANNGRAAYVVRFLDLRYNYPGRSARGTLGAKVFLTRDLKVVDESFGMSRADTHNPARE*
Ga0075030_1008336602	3300006162	Watersheds	TEQLENDPVENARAAYSVRFRDLRYDYAGRDARATLSGMVLLTRDLQVVDERFGMRSANKR*
Ga0075030_1009441291	3300006162	Watersheds	VYLSWAQYPITETEQLDNDPADHSHAAYIVRLRDLRYAYPGQSSARAMLGARVFLTRDLQVVDEQMGMRSATPSGQK*
Ga0066793_101683432	3300009029	Prmafrost Soil	SWAQYPVTETFQLENDPVENARAAYVVRFRDLRYDYPGRNARATLGAMVFLTRDLQVVEERFGMRSSSTKTR*
Ga0066793_105066022	3300009029	Prmafrost Soil	LANDPVDNARAAYIVSFRDLRYDYPGRSSRAPLGATVFLTRDLQVVEERFGIRSTSTQTR
Ga0099829_101614042	3300009038	Vadose Zone Soil	VTETEQLENDPVGNTRAAYAVRFRDLRYDYPGRNARVTLGAMVFLTRDLQVVEERFGIRSTDTKTP*
Ga0099829_103537722	3300009038	Vadose Zone Soil	VTETEQLENDPVGNTRAAYAVRFRDLRYDYPGRNARVTLGAMVLLTRDLRVVDERFGIRSTGTKMP*
Ga0116220_100794611	3300009525	Peatlands Soil	TETEELENGAALVTPNDSIGNGRAAYVVRFRDLRYDYPGRDARSILGATVFLTRDLHVVEEHFGMGSASTKAR*
Ga0116112_10080861	3300009636	Peatland	RVYLSWAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGRDARAMLGATIFLTRDLQVVEERFGMGSRRQGRNRE*
Ga0116112_12315441	3300009636	Peatland	RVYLSWAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR*
Ga0116121_12777311	3300009644	Peatland	TLAAKNTYLGRVYLSCAQYPVTETEQLEKDLANDPVESARAAYVVRFRDLRYDYPERNTSALLGATVFLTRDLQVVEERFGMGSRHQGRNSE*
Ga0116224_106203771	3300009683	Peatlands Soil	TEELENGAAIVTPNDPIGNGRAAYVVRFRDLRYDYPGRDARSILGATVFLTRDLHVVEEHFGMGSASTKAR*
Ga0116217_105733821	3300009700	Peatlands Soil	QLQNDPVDSTGTAYAVSFLDLRYDYPGRNGRSTLGAMVLLNRDLQVVEERFGIRSTSAKTR*
Ga0074046_102925291	3300010339	Bog Forest Soil	ETEELANRTSGSAGAAYEVRFRDLRYDYPGHEARATLGAVVVLTRDLRVVDERFGLGSTDTK*
Ga0137384_105629212	3300012357	Vadose Zone Soil	WAQYPVTETEQINEGPVAYVVRFRDLRYAYPGRDTRALGAMVFLDRDLRVVEERFGMRTSSASRKR*
Ga0137390_106035961	3300012363	Vadose Zone Soil	AQYPVTETEQLENDPISNTRAAYAVRFRDLRYDYPGRNTRVTLGATVLLTRDLQVVEERFGIRSTDTKTP*
Ga0137358_108119321	3300012582	Vadose Zone Soil	TEQLENDPANKDAVSNGRAAYAVRFRDLRYDYPGRNARVTLGAMVFLTRDLQVVDERFGMRSTNSNAK*
Ga0137395_105331101	3300012917	Vadose Zone Soil	AETEQLENDPANKVPVSNGRAAYAVRFRDLRYDYPGRNARVTLGATVFLTRDLQVVKETFGMRSSK*
Ga0137359_114151881	3300012923	Vadose Zone Soil	ETEQLENDPAHNGRAAYVVRFRDLRYDYPGRNARVTLGAMVFLTRDLQVVEERFGMRSANSNAK*
Ga0181527_10824571	3300014153	Bog	TEQIDSDPVSARAAYMVRFRDLRYDSPGTNARGMLGAQVFLTRDLQVVDERFGMGSAKNR
Ga0181524_100684954	3300014155	Bog	YPITETEQLANDPVENTRAAYVVRFRDLRYDYPGRDARAMLGATIFLTRDLQVVEERFGMGSRRQGRNRE*
Ga0181530_103496701	3300014159	Bog	YPITETEQLENDPAIVTANTPVGNARAAYLVRFRDLRYDYPGRDARAMLGATVFLTRDLQVVEERFGMGSCASGQK*
Ga0181531_103676291	3300014169	Bog	AKKAYTGRVYLSWAQYPVTETEQVDSDPGHSNGTAYVVRFRDLRYDDPERSGRVILGARVLLNRDLQVVDERFGMR*
Ga0181535_102448673	3300014199	Bog	YPVTETEELENDTIGNGRAAYVVRFRDLRYDYPGSSARATLGAVVLLTRDLQVVDERFGAWGPSTKTR*
Ga0181526_110776581	3300014200	Bog	TETEQLTNDPVENARAAYAVRFRDLRYDYPGRNARATLGAVVFLTRDLQVVEERFGIGSASTK*
Ga0182019_103567021	3300014498	Fen	PITETEQLANDPVESARAAFVVRFRDLRYDYPGSNARAPLGAIVLLTRDLQVVDERFGMGSRHQGTNRE*
Ga0182021_103516651	3300014502	Fen	VYLSWAQYPITETEQLANDPVESARAAFVVRFRDLRYDYPGRNARATLGAMVLLTRDLQVVDESFGMGSTNTR*
Ga0182021_111850943	3300014502	Fen	VYLSWAQYPITETEQLANDPVESARAAFVVRFRDLRYDYPGSNARAPLGAIVLLTRDLQVVDERFGMGSRHQGTNRE*
Ga0181536_100786014	3300014638	Bog	RVYLSWARYPVIETEELENDPIGNGRAAYVVRFRDLRYDYPGSSARATLGAVVLLTRDLQVVDERFGAWGPSTNTR*
Ga0181536_102956162	3300014638	Bog	WAQYPVTETEQIDSDPVNNARAAYLVRFRDLRYDSPGTNARGMLGAQVFLTRDLRVVDERFGMGSSKSR*
Ga0181522_105700111	3300014657	Bog	HVYLSWAQYPITETEQIENAGNKRAAYIVRFRDLRYEYPGSPARAALGAVVLLTGDLQVVDERFGMKSAGTR*
Ga0167668_10045401	3300015193	Glacier Forefield Soil	GLGPANNGPVSNGRAAYVVRFRDLRYDYPGRNARVTLGAMVFLTRDLQVVEERFGMRSTSTNTR*
Ga0187818_100815412	3300017823	Freshwater Sediment	QVYLSWAKYPVTETEPLENGPAAYVVRFRDLRYAYPGRVGRATLSARVFLNRDLQAVSEQFGMRANSSTGRSEP
Ga0187856_12833222	3300017925	Peatland	YLGRVYLSWAQYPITETEELENGAAIAANDPIGNGRAAYVVRFRDLRYDYPGRNMRATLGATVFLTRDLHVVEEHFGMSAGGRPSGKDR
Ga0187856_12981551	3300017925	Peatland	ATVTANVPIGNARAAYAVRFRDLRYDYPGSNARAMLSAMVLLTRDLQVVDERFGIRGTSTKTR
Ga0187849_11644792	3300017929	Peatland	VYLSWAEYPVVETEQLQNDPVDNPVESARAAYVVRFRDLRYDYPGRNARAMLGAAVFLTRDLQVVEEHFGMGSRHQGRNRE
Ga0187877_11972512	3300017931	Peatland	DLANGPAINPDATARAAYAVRFRDLRYDYPGSNARAMLSAMVLLTRDLQVVDERFGIRGTSTKTR
Ga0187801_104347061	3300017933	Freshwater Sediment	AQYPLIETEQLENDPVDHPGESAQAAYVVRFRDLRYDYPGRSGRATLGAKVFLNRDLQVVEERFGIRGNGSKTR
Ga0187848_100933621	3300017935	Peatland	GRVYLSWAQYPITETEELENGAAIAANDPIGNGRAAYVVRFRDLRYDYPGRNMRATLGATVFLTRDLHVVEEHFGMSAGGRPSGKDR
Ga0187847_103243301	3300017948	Peatland	PVTETEELANRTSGSAGAAYEVRFRDLRYDYPGHEARATLGAVVVLTRDLRVVDERFGLGSTDTK
Ga0187781_109073192	3300017972	Tropical Peatland	ITLAAKNSYLGRVFLSWAVYPITETEELLSDPSQPNRAAYVVRLRDLRYAYPGLTSRAPLGARVVLSRDLRVLDERMGMRGSAKDER
Ga0187816_101470033	3300017995	Freshwater Sediment	GRVYLSWAQYPVTETEQLENTGAAYAVRFRDLRYDYPGRSGRATLGAVVLLTRDLHVVDERFGMRSASTNTR
Ga0187878_13063661	3300018005	Peatland	VYLSWAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGRDARAMLGATIFLTRDLQVVEERFGMGSRRQGRNRE
Ga0187804_102693622	3300018006	Freshwater Sediment	AQYPLIETEQLENDPAGHPGESAHAAYVVRFRDLRYDYPGRGGRATLGARVFLTRDLQVVEAQVGIRGNGMKTR
Ga0187805_100814481	3300018007	Freshwater Sediment	PITETEELPDGGANDGAAYLVRLRDLRYMYPGRGASSTLGGSVTLTRDLQVVEERFGMGSRHHGRNSE
Ga0187884_100971471	3300018009	Peatland	SWAQYPITETEELENGAAIVSPNDPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0187873_11577051	3300018013	Peatland	RVYLSWAQYPITETEELENGAGIVTANDPIGNGRAAYVVRFRDLRYDYPGRNMRATLGATVLLTRDLHVVEEHFGMSAGGRPSGKDR
Ga0187873_12004132	3300018013	Peatland	AQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR
Ga0187872_101875331	3300018017	Peatland	LSWAQYPITETEALENEPVIITPNDPIGNGRAAYVVRFRDLRYDYPGGDARVTLGAMVFLTRDLQVVGEQFGMRSTSTKNR
Ga0187874_101534471	3300018019	Peatland	PATVTANVPIGNARAAYAVRFRDLRYDYPGSNARAMLSAMVLLTRDLQVVDERFGIRGTSTKTR
Ga0187889_102494112	3300018023	Peatland	VYLSWAQYPITETEELENGAAIVSPNDPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0187881_103981241	3300018024	Peatland	GAAIVSPNHPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0187885_100670671	3300018025	Peatland	ITETEQLANDPVENTRAAYVVRFRDLRYDYPGRDARAMLGATIFLTRDLQVVEERFGMGSRRQGRNRE
Ga0187885_105007952	3300018025	Peatland	GRVYLSWAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR
Ga0187857_100505601	3300018026	Peatland	QYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGRDARAMLGATIFLTRDLQVVEERFGMGSRRQGRNRE
Ga0187869_105681942	3300018030	Peatland	GRVYLSWAQYPITETEELENAAAIVSPNHPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0187862_106393152	3300018040	Peatland	WAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR
Ga0187862_106772891	3300018040	Peatland	KTYLGRVYLSWAQYPITETEELENGAAIVSPNDPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0187862_109026171	3300018040	Peatland	TYLGRVYLSWAQYPITETEELANGAAIVTPNDPIGNGRAAYVVRFRDLRYDYPGRNMRATLGATVLLTRDLHVVEEHFGMSTQGRPSGKDR
Ga0187784_106044541	3300018062	Tropical Peatland	SYLGRVYLSWAQYPITETEELGNGAAIVIPNDSIDNGRAAYVVHFRDLRYDYPGRDARSILGATVFLTRDLHIVEEHFGMGSASRKAQ
Ga0187770_112846231	3300018090	Tropical Peatland	YLSWAQYPITETEELGNGAAIVTPNDSIGNGGAAYVVHFRDLRYDYPGRNMRATLGATVFLTRDLHVVEEHFGMGSAGRKAE
Ga0210402_111446012	3300021478	Soil	AGLGPANHGPGSNGRAAYVVRFRDLRYDDPGGNARVTLGAMVFLTRDLQVVEERFGMRSTSTNTR
Ga0208821_10375631	3300025432	Peatland	LGRVYLSWAQYPITETEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR
Ga0208034_10910811	3300025442	Peatland	TEQLANDPVENTRAAYVVRFRDLRYDYPGSNARAPLGATVLLTRDLQVVDERFGMGSASTKTR
Ga0208189_10409342	3300025444	Peatland	AKKTYLGRVYLSWAQYPITETEELENRAAIVSPNDPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAQ
Ga0208188_10426083	3300025507	Peatland	WAQYPITETETLENGAGIVTPNDPIGNGRAAYVVRFRDLRYDYPGRDARAMLGATVFLTRDLHVVEEHFGMGSASTKAQ
Ga0207927_11162172	3300025579	Arctic Peat Soil	YPVTETEQLANDPVDNARAAYIVSFRDLRYDYPGRSSRAPLGATVFLTRDLQVVEERFGIRSTSTQTR
Ga0209471_11406551	3300026318	Soil	SWAQYPVTETEQLENDPANKVPVSNGRAAYAVRFRDLRYDYPGRNARVTLGATVFLTRDLQVVKETFGMRSSK
Ga0257168_10645833	3300026514	Soil	AGLGPANNGPVSNGRAAYVVRFRDLRFDYPGRNARVTLGAMVFLTRDLQVVEERFGTRSTSTNTR
Ga0208042_10262402	3300027568	Peatlands Soil	TETEELENGAALVTPNDSIGNGRAAYVVRFRDLRYDYPGRDARSILGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0209733_10134974	3300027591	Forest Soil	ENDPAHKDPVSNGRAAYVVRFRDLRYDYPGRNARIALGAMVFLTRDLQVVDERFGMRSASTNTR
Ga0209422_10202681	3300027629	Forest Soil	TETEQLENDPANKGPVSNGRAAYVVRFRDLRYDYPGRNARIALGAMVFLTRDLQVVDERFGMRSASTNTR
Ga0209118_10134971	3300027674	Forest Soil	PAGLGPANNGPGSNGRAAYVVRFRDLRYDYPGRNARVTLGAMVFLTRDLRVVEERFGMRSTSTNTR
Ga0209626_11877762	3300027684	Forest Soil	IAAKRTYLGRVYLSWAQYPVTETQQLVNDPAGLGPANNGPANNGPVSNGRAAYVVRFRDLRYDYPGRNARVTLGAMVFLTRDLQVVEERFGMRSTSTNTR
Ga0208989_100240171	3300027738	Forest Soil	VYLSWAQYPVTETEQLENDPAHNGRAAYVVHFRDLRYDYPGRNASVTLGAMVFLTRDLQVVEERFGIRSTTRSSANSR
Ga0209448_102851751	3300027783	Bog Forest Soil	YLSWAQYPLIETEQLESDPVDHTRAAYVVRFRDLRYDYPGRSGRATLGAKVFLNRDLQVVKNGLE
Ga0209180_102231691	3300027846	Vadose Zone Soil	PVTETEQLDNDPINNARAAYAVRFRDLRYDYPGRNARVTLGATVLLTRDLQVVEERFGIRGTGTKTP
Ga0302219_101614173	3300028747	Palsa	YLSWAQYPVTETEQVDSDPGHSNGTAYVVRFRDLRYDDPERSGRVILGARVLLNRDLQVVDERFGMR
Ga0302234_104720832	3300028773	Palsa	PITETEVLSNDPMNNTRAAYVVRFRDLRYDYPGSPARATLGASVLLTRDLQVVDERFGMRGASSR
Ga0265338_109695072	3300028800	Rhizosphere	VYLSWAQYPITETEQLADNPVESARASYVVRFRDLRYDYPGRAMRATLAAMVLLNRDLQVLDERFGIGSANAR
Ga0308309_100195178	3300028906	Soil	QYPITETEQLQDDPAINPIGNNRAAYLVRFRDLRYNYPGRDARATLGASVLLTRDLQVVEERFGMRGTNTK
Ga0246001_10149891	3300029889	Peat	RVYLSWAQYPVTETEQLEHDPVENAHAAYVVRFRDLRYDYPGRNARATLGAMVFLTRDLQVVDERFGIRSTSTTTR
Ga0246001_10162824	3300029889	Peat	RVYLSWAQYPITETEELENGAAIVSPNHPIGNGRAAYVVRFRDLRYDYPGRDARSMLGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0311369_104015251	3300029910	Palsa	YPVTETEQVDSDPGHSNGTAYVVRFRDLRYDDPERSGRVILGARVLLNRDLQVLDERFGM
Ga0311339_117983741	3300029999	Palsa	AYLSWAQYPITETEQIEDDLIDNGRAAYVVRFRDLRYGYSGRNARATLGAAVFLTRDLQVVSESFGMSSTAAISR
Ga0302177_102328863	3300030053	Palsa	QYPITDTEILDNKPVGNRRAAYAVHFRDLRYDYPGRRGRVALGAVVLLTSDLQVIEERFGVGTGD
Ga0302179_102412411	3300030058	Palsa	TYTGRVYLSWAQYPVTETEQVDSDPGHSNGTAYVVRFRDLRYDDPERSGRVILGARVLLNRDLQVVDERFGMR
Ga0310038_100693681	3300030707	Peatlands Soil	SWAQYPITETEELENGAAIVTPNDPIGNGRAAYVVRFRDLRYDYPGRDARSILGATVFLTRDLHVVEEHFGMGSASTKAR
Ga0302325_127071762	3300031234	Palsa	SWAQYPVTETEQVDSDPGHRNGAAYVVRFRDLRYDYPEQSGRVTLGATVLLDRDLEVVAERFGSR
Ga0265340_102960721	3300031247	Rhizosphere	YPITETEQLADNPVESTRAAYVVRFRDLRYDYPGRAMRATLAAMVLLNRDLQVLDERFGIGSANAR
Ga0302140_1000170130	3300031261	Bog	YPLVETEELAPDSVNKTDAAYAVRFMDLRYDYPGSTRGTLSAVVFLNRDLQVVEERFGMGHNGRSTK
Ga0302326_116877471	3300031525	Palsa	SWAQYPVTETEQVDSDPGHSNGTAYVVRFRDLRYDDPERSGRVILGARVLLNRDLQVVDERFGMR
Ga0371490_10526391	3300033561	Peat Soil	YLSWAQYPITETEQLADDPAVVTANDSIGSARAAYVVRFRDLRYDYPGRNARATLGATVSLTRDLQVLDERFGMGSRHQASNRE
Ga0334816_025497_931_1152	3300033819	Soil	LSWAKYPVTETEELQSDPVDNTRAAYAVRFRDLRYDYPGSGARGTLGAVVLLTRDLQVVDERFGMRGASTNTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences