Metagenome / Metatranscriptome Family F099957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099957
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	134 residues
Representative Sequence	MPSAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGPPALPYLDDIGAF
Number of Associated Samples	98
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.72 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	86.41 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.699 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.476 % of family members)
Environment Ontology (ENVO)	Unclassified (35.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (27.184 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.45% β-sheet: 20.65% Coil/Unstructured: 52.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF08148	DSHCT	25.24
PF01019	G_glu_transpept	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4581	Superfamily II RNA helicase	Replication, recombination and repair [L]	25.24
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.70 %
Unclassified	root	N/A	23.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.70 %
Unclassified	root	N/A	23.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.70 %
Unclassified	root	N/A	23.30 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	75.73 %
Unclassified	root	N/A	23.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	75.73 %
Unclassified	root	N/A	23.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	75.73 %
Unclassified	root	N/A	23.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	48.54 %
Unclassified	root	N/A	23.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	48.54 %
Unclassified	root	N/A	23.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10062024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2076	Open in IMG/M
3300002121\|C687J26615_10170763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300003994\|Ga0055435_10086298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	812	Open in IMG/M
3300004020\|Ga0055440_10125667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300004052\|Ga0055490_10066935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	966	Open in IMG/M
3300004052\|Ga0055490_10129580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	730	Open in IMG/M
3300005294\|Ga0065705_10986413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300005444\|Ga0070694_100041156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3081	Open in IMG/M
3300005445\|Ga0070708_102085253	Not Available	524	Open in IMG/M
3300005468\|Ga0070707_101648151	Not Available	608	Open in IMG/M
3300005468\|Ga0070707_102050570	Not Available	539	Open in IMG/M
3300005518\|Ga0070699_100067250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3111	Open in IMG/M
3300005536\|Ga0070697_101759105	Not Available	554	Open in IMG/M
3300005546\|Ga0070696_100760013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	795	Open in IMG/M
3300005829\|Ga0074479_10960507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300005881\|Ga0075294_1029027	Not Available	560	Open in IMG/M
3300005883\|Ga0075299_1020257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	655	Open in IMG/M
3300009078\|Ga0105106_11222890	Not Available	533	Open in IMG/M
3300009090\|Ga0099827_11428661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	602	Open in IMG/M
3300009553\|Ga0105249_11944294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	661	Open in IMG/M
3300009810\|Ga0105088_1099049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300010362\|Ga0126377_10123491	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2396	Open in IMG/M
3300010399\|Ga0134127_10104037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2494	Open in IMG/M
3300010400\|Ga0134122_10704742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	949	Open in IMG/M
3300011120\|Ga0150983_14386119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	854	Open in IMG/M
3300011271\|Ga0137393_11719206	Not Available	516	Open in IMG/M
3300011410\|Ga0137440_1091369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300011425\|Ga0137441_1155898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	569	Open in IMG/M
3300011442\|Ga0137437_1168926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	758	Open in IMG/M
3300012096\|Ga0137389_10847569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	784	Open in IMG/M
3300012199\|Ga0137383_11099187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300012363\|Ga0137390_12000021	Not Available	505	Open in IMG/M
3300012930\|Ga0137407_10185786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1857	Open in IMG/M
3300012944\|Ga0137410_11655493	Not Available	562	Open in IMG/M
3300014873\|Ga0180066_1084021	Not Available	654	Open in IMG/M
3300014881\|Ga0180094_1136580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300014885\|Ga0180063_1141401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	756	Open in IMG/M
3300015170\|Ga0120098_1007319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1131	Open in IMG/M
3300015254\|Ga0180089_1083534	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300015371\|Ga0132258_13666904	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1049	Open in IMG/M
3300017994\|Ga0187822_10020158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1698	Open in IMG/M
3300018029\|Ga0187787_10048286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1248	Open in IMG/M
3300018061\|Ga0184619_10429865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300018063\|Ga0184637_10582074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	637	Open in IMG/M
3300019487\|Ga0187893_10067586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3418	Open in IMG/M
3300019878\|Ga0193715_1046332	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	936	Open in IMG/M
3300019881\|Ga0193707_1095519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	894	Open in IMG/M
3300019882\|Ga0193713_1033546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1500	Open in IMG/M
3300019887\|Ga0193729_1134005	Not Available	910	Open in IMG/M
3300019890\|Ga0193728_1215991	Not Available	794	Open in IMG/M
3300020001\|Ga0193731_1169579	Not Available	524	Open in IMG/M
3300020002\|Ga0193730_1065613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1038	Open in IMG/M
3300020004\|Ga0193755_1016162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2457	Open in IMG/M
3300020021\|Ga0193726_1363992	Not Available	525	Open in IMG/M
3300020580\|Ga0210403_10096983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2388	Open in IMG/M
3300021088\|Ga0210404_10070137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1701	Open in IMG/M
3300021972\|Ga0193737_1055955	Not Available	562	Open in IMG/M
3300025324\|Ga0209640_10132609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2138	Open in IMG/M
3300026002\|Ga0208907_107526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	546	Open in IMG/M
3300026005\|Ga0208285_1006003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300026075\|Ga0207708_11499846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300026345\|Ga0257148_1024729	Not Available	502	Open in IMG/M
3300026354\|Ga0257180_1002638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1714	Open in IMG/M
3300026358\|Ga0257166_1023457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300026361\|Ga0257176_1023487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	902	Open in IMG/M
3300026361\|Ga0257176_1081233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300026371\|Ga0257179_1007070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300026377\|Ga0257171_1015531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1269	Open in IMG/M
3300026480\|Ga0257177_1029041	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	811	Open in IMG/M
3300026481\|Ga0257155_1072646	Not Available	554	Open in IMG/M
3300026496\|Ga0257157_1078198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	570	Open in IMG/M
3300027650\|Ga0256866_1080231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300027671\|Ga0209588_1037650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1557	Open in IMG/M
3300027765\|Ga0209073_10165532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	824	Open in IMG/M
3300027821\|Ga0209811_10418321	Not Available	520	Open in IMG/M
3300027846\|Ga0209180_10688899	Not Available	557	Open in IMG/M
3300028047\|Ga0209526_10469572	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	825	Open in IMG/M
3300028792\|Ga0307504_10255307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300028807\|Ga0307305_10173273	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	995	Open in IMG/M
3300028884\|Ga0307308_10212993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	926	Open in IMG/M
3300028906\|Ga0308309_10032486	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3595	Open in IMG/M
3300031114\|Ga0308187_10167284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1109013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300031184\|Ga0307499_10111006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	763	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10103774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	765	Open in IMG/M
3300031455\|Ga0307505_10109109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1247	Open in IMG/M
3300031720\|Ga0307469_10655535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	946	Open in IMG/M
3300031720\|Ga0307469_11923013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	573	Open in IMG/M
3300031820\|Ga0307473_11039626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	600	Open in IMG/M
3300032174\|Ga0307470_10016517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3214	Open in IMG/M
3300032180\|Ga0307471_100126512	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2396	Open in IMG/M
3300032893\|Ga0335069_10577593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1293	Open in IMG/M
3300033417\|Ga0214471_10213118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1584	Open in IMG/M
3300033475\|Ga0310811_10650055	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300033500\|Ga0326730_1111551	Not Available	507	Open in IMG/M
3300033502\|Ga0326731_1014823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1919	Open in IMG/M
3300033513\|Ga0316628_101999452	Not Available	770	Open in IMG/M
3300034090\|Ga0326723_0096002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1279	Open in IMG/M
3300034165\|Ga0364942_0168341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	714	Open in IMG/M
3300034178\|Ga0364934_0164392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300034817\|Ga0373948_0142812	Not Available	593	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.55%
Aquatic	Environmental → Aquatic	15.53%
Plants	Host-Associated → Plants	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.73%
Sediment	Environmental → Aquatic → Sediment	9.71%
Marine	Environmental → Aquatic → Marine	3.88%
Peat	Environmental → Terrestrial → Peat	2.91%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Floodplain	Environmental → Terrestrial → Floodplain	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Cave	Environmental → Terrestrial → Cave	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.49%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.88%
Sand	Environmental → Terrestrial → Soil → Sand	2.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.88%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.94%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.97%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.97%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300026002	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202 (SPAdes)	Environmental	Open in IMG/M
3300026005	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100620241	3300001661	Forest Soil	MPSAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEXDGDFAVQLYRGXVTLPELRXFLSRCRVTRGALVDDQXYVATXXEXPVLAVLXXWRXRPGPPALPYLDDINAFMPASA
C687J26615_101707631	3300002121	Soil	MPSTSTALTWIEPGASATLVWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDDAFAPRLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAE
Ga0055435_100862982	3300003994	Natural And Restored Wetlands	MPIDALTWIEPGASATLIWHGAAAPRPGGGRLYVVSGPILEQPPGSPYFILAAEEDGDFAARLYRGQAALPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDAWRERPGPPSLPYLDDINAFMPASA
Ga0055440_101256671	3300004020	Natural And Restored Wetlands	MPSAALTWIEPGASATLIWHGAAASQPGRGRLYVVAGPILERPPASPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRVARGALVDDQQYVATDEEAPVLAVLDAWRERPGPPSLPYLDDINAFMPASAPLYVTAEAHAVAQREPEQFGTAWVCDECGEAE
Ga0055490_100669352	3300004052	Natural And Restored Wetlands	MRSAALTWIEPGASATLIWHGAAAARPRDGRLYSLSGPAFEQPPASPYFLLAPVEADAFAGRLYRGEVSLPDLREFLLGCRVARGVLVDEMQYVLAVDEAPVLPLLDAWRDDQVPALPYL
Ga0055490_101295801	3300004052	Natural And Restored Wetlands	MPSAALTWIEPGASATLIWHGAAASQPGRGRLYVVAGPILERPPASPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRVARGALVDDQQYVATDEELPVLALLDDWRGRPGAPVLPYLDDINAFMPAAAPLYVTAEAHAAAQRE
Ga0065705_109864131	3300005294	Switchgrass Rhizosphere	MPSAALTWIGPGASATLIWHGAAASRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFAARLYRGRVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDDWRDRP
Ga0070694_1000411563	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPSAALTWIEPGASATFIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFATRLYRGQVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDEWRDRPGPPALPY
Ga0070708_1020852531	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TCSARSPRSTFATNSRVLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLAYLDDINAFMPAAPLYVTAEAHAAAQREPE
Ga0070707_1016481511	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLAYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDE
Ga0070707_1020505701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SPRSTFATNSRVLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPAEDDVFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDE
Ga0070699_1000672503	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRSAPLTWIEPGASATLIWHGAAASRPGGGHLYSVSGPALEQPPATPYFILASVEDGAFAGELYRGQVTLPALRAFLSRCRIAHGALVDEMQYVATSSEAPLLPLLDGWRDEAGPPVLPYLDDINAFMPAAAPLYVTADAHEAAQREV
Ga0070697_1017591051	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TCSARSPRSTFATNSRVLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPAEDDVFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDE
Ga0070696_1007095922	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPAEDDVFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLA
Ga0070696_1007600131	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPSAAATWIEPGASATLIWHGAAAAQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFASQLYRGQVALPELRAFLSRCRITRGALVDEQQYVATDEEA
Ga0074479_109605072	3300005829	Sediment (Intertidal)	MPSAALTWIEPGASATLIWHGAVASRPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAARLYRGQAALPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDDWRDRPGPPALPYLDDINAF
Ga0075294_10290271	3300005881	Rice Paddy Soil	MRAVAPTWIEPGASATLIWHGAAAPGPGGVRLYPVSGPAFERPPISPLFILAPVETGAFAGRLYRGQATLADLRGFLSHCRIARGALVDEMQSVATSEEAPVLPVLDDWREALGPPRLPYLADIDAFLPAAAPLYVTAEAHAAAQREPERF
Ga0075299_10202571	3300005883	Rice Paddy Soil	MRAAAPTWIEPGASATLIWHGAAAPGPGGVRLYPVSGPAFERPPISPLFILAPVETGAFAGRLYRGQATLADLRGFLSHCRIARGALVDEMQSVATSEEAPVLPVLDDWREAPGPPRLPYLADIDAFLPAAA
Ga0105106_112228901	3300009078	Freshwater Sediment	MPSAALTWIEPGASATLIWHGAAASQPGRGRLYVVSGPILEQPPASPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRVARGALVDDQQYVATDEELPVLALLDDWRGRPGAPVLPYLDDINAFMPAAAPLYVTAEA
Ga0099827_114286611	3300009090	Vadose Zone Soil	MPSAALTWIEPGASATLIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLADINAFMPASAPLYVTA
Ga0105249_119442941	3300009553	Switchgrass Rhizosphere	MPSAALTWIEPGASATFIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFATRLYRGQVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDEWRDRPGPPALPYLDDIN
Ga0105088_10990491	3300009810	Groundwater Sand	MRSAPLTWIEPGASATLIWHGAAAPRPGGGHLYSVSGPALEQPPATPYVILASVEDGAFAGQLYRGQVTLPGLRAFLSRCRIAHGALVDEMQYVATSTEVPVLPLLDGWREEAGPPVLPYLDDINAFMPAAAPLYVTADAHEAAKREAEQFSTAWVCDECGD
Ga0126377_101234913	3300010362	Tropical Forest Soil	MRSAAPTWIDPGASATLIWHGATAARPGEGRLYSLSGPAFGQPPASPYFLLASVEDDAFATRLYRGQVTLPDLRTFLGGCRIARGALVEEMQYVMALEEAPVLPLLDDWREAAAPTVPYLDDINA
Ga0134127_101040373	3300010399	Terrestrial Soil	MPSAALTWIEPGASATFIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFATRLYRGQVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDEWRDRPGPPALPYLDDINAFMPA
Ga0134122_107047422	3300010400	Terrestrial Soil	LGVFSTTPMPSAAATWIEPGASATLIWHGAAAAQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFASQLYRGQVALPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDEWRERSGRPALPYLDDIN
Ga0150983_143861192	3300011120	Forest Soil	MPMPSAALTWIEPGASATLVWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDAFAAHLYRGQATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETP
Ga0137393_117192061	3300011271	Vadose Zone Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDEC
Ga0137440_10913692	3300011410	Soil	MPSAALTWIEPGANATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGPPG
Ga0137441_11558982	3300011425	Soil	MPRAALTWIEPGASATLIWHGAAAAQPGGGRLYVVAGPILEQPPASPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGP
Ga0137437_11689261	3300011442	Soil	LGVFTTTPMPSTSALTWIEPGASATLIWHGAVASQPGGGRLYVVSGPILELPPASPYFILAAEEDDDFAARLYRDQVTLPDLRAFLARCRVTRGVLVDDQQYVAAAEEAPVLAVLDDWRARSGPPALPYLDDINAFMPATAPLYVTAEAHA
Ga0137389_108475691	3300012096	Vadose Zone Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAISGPALEQPPASPHFLLAPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDDWREAPDVPALPYLDDINAFM
Ga0137383_110991872	3300012199	Vadose Zone Soil	LGVFTTPMPSTALTWIEPGASATLTWHGQVATGPGGGRLYAVSGPALEQPPASPHFLLAPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDGWREAPDVPVLPYLD
Ga0137390_120000211	3300012363	Vadose Zone Soil	GVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVFGPALEQPPASPHFLLAPADDDAFAARLYRGQVTPGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGD
Ga0137407_101857861	3300012930	Vadose Zone Soil	MPSAALTWIEPGASATFIWHGAAASRPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFATRLYRGQVALPELRVFLSRCRVTRGALVDDQQYVATDEELPVLTVLDDWRDRPGPPALP
Ga0137410_116554931	3300012944	Vadose Zone Soil	LGVFSTTPMPSAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPVLPYLDDINAFMPASAPLYVTAEAHAAAQRE
Ga0180066_10840211	3300014873	Soil	MPNTSTALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDDAFAPRLYRGQVTLSELRTFLSRCRITRGALVDDQQYVATNEEAPVLAVLDDWRGRPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDEC
Ga0180094_11365801	3300014881	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDDAFAPRLYRGQVTLSELRAFLSRCRITRGALVDDQQYVATNEEAPVLAVLDDWRGRPGPPALPYLDDIGAFMP
Ga0180063_11414012	3300014885	Soil	LGVFSTTPMPRAALTWIEPGASATLIWHGAVASQPGGGRLYVVAGPILEQPPASPYFILAAEEDGDFAARLYRDQVTLPDLRAFLARCRVTRGALVDDQQYLAAAEELPVLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQSEPEQ
Ga0120098_10073191	3300015170	Fossill	MPSAALTWIEPGASATLIWHGATASQPGGGRLYVVSGPILEQPPASPYFILAAEEAGDFAARLYRGQVTLPELRAFLSGCRITRGALVDEQQYVATDEEAPVPM
Ga0180089_10835341	3300015254	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPVSPYFILAAEEDGDFAARLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATNE*
Ga0132258_136669042	3300015371	Arabidopsis Rhizosphere	LGVVTTPMPSTPPTWIEPGASATLIWHGATATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADPFAARLYRGQVSLEDLRAFLAHCRIAPGALVDEMQYLAVADEAPVLPVLDAWREAPDVPALPYLDDINAFMPAGPLYVTAEAHAAARREPEQFATAWVCDECGEA
Ga0187822_100201581	3300017994	Freshwater Sediment	MPSTALTWIEPGASATLIWHGAAATGPGGARLYAVSGPALEQPPATPYFLLAPAETDAFAARLYRGQVSLDDLRAFLARCRIAQGALVDEMQYLAVADEAPVLPVLDAWREAPDVPALPYLDDINAFMPAGPLYVTAEAHAV
Ga0187787_100482861	3300018029	Tropical Peatland	MRSAALTWIEPGASATLIWHGAAASGPGASRLYSLSGPAFEQPPASPYFLLAPVEAGTFAARLYRGQATLVDLRAFLLDCRIAHGALVDEMQYVMAVEEAPVLPVLDDWREEAVPSLPYLADINA
Ga0184619_104298652	3300018061	Groundwater Sediment	MPRTALTWIEPGASATLIWHGAVASQPSGGRLYVVAGPILEQPPASPYFILAAEEDGDFAAQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQRE
Ga0184637_105820742	3300018063	Groundwater Sediment	MPSAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGPPALPYLDDIGAF
Ga0187893_100675863	3300019487	Microbial Mat On Rocks	MPSAALTWIEPGASATLIWHGATAPRPGGGRLYVVSGPVLEQPPASPYFILAAEEEGEFADRLYRGQVALPELRTFLSRCRIARGALVDEQQYVATDEEEPVLALLDDWRGLEGPPALPYLDDISAFMPAG
Ga0193715_10463322	3300019878	Soil	MPRTALTWIEPGASATLIWHGAVASQPSGGRLYVVAGPILEQPPASPYFILAAEEDGDFAAQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERRCPTSTTSTRSCPPPPRST
Ga0193707_10955192	3300019881	Soil	MPRTALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPV
Ga0193713_10335463	3300019882	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLD
Ga0193729_11340051	3300019887	Soil	VLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAISGPALEQPPASPHFLLSPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVADEA
Ga0193728_12159912	3300019890	Soil	VLDLGVFTTPMPSTALTWIAVATGPGGGRLYAISGPALEQPPASPHFLLAPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVADEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPL
Ga0193731_11695791	3300020001	Soil	GVNARDIGPGRLPIQRDSRVLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAISGPALEQPPASPHFLLAPAEDDAFADRLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVADEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQR
Ga0193730_10656133	3300020002	Soil	MPRTALTWIEPGASATLIWHGAVASQPSGGRLYVVAGPILEQPPASPYFILAAEEDGDFAAQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEV
Ga0193755_10161621	3300020004	Soil	MPRTALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLDD
Ga0193726_13639921	3300020021	Soil	MPRTALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAW
Ga0210403_100969831	3300020580	Soil	MPSAALTWIEPGASATLVWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEHDAFAAHLYRGQATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETPVLPLLDEWHAAPDRPLLPYLDDINAFLPGAAPLYVTAEAHAAARREPQQFTTAWVCDECGE
Ga0210404_100701371	3300021088	Soil	MPSAALTWIEPGASATLVWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDAFAAHLYRGRATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETPVLPLLDEWHAAPDRPLLPYLDDINAFLPGAAPLYVTAEAHAAARREPQQFTTA
Ga0126371_127537251	3300021560	Tropical Forest Soil	MASPAFTWIEPGASATLIWHGADASRPDGGRLYSLSGPALEQPPASPYFILAPVEDGDFADRLYRGQVTLTDLRAFLARCRIARGALVEDMQYVATGE
Ga0193737_10559551	3300021972	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQF
Ga0209640_101326091	3300025324	Soil	MPSTSTALTWIEPGASATLVWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDDAFAPRLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDA
Ga0208907_1075261	3300026002	Rice Paddy Soil	MRAAAPTWIEPGASATLIWHGAAAPGPGGVRLYPVSGPAFERPPISPLFILAPVETGAFAGRLYRGQATLADLRGFLSHCRIARGALVDEMQSVATSEEAPVLPVLDDWREALGPPRLPYLADIDAFLPAAAPLYVTAEAHAAAQRENNRTPIQLRVDELIVHRAHRVERFELFAFGNFN
Ga0208285_10060032	3300026005	Rice Paddy Soil	MPSTALTWIEPGASATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVTLADLRAFLARCRIAQGALVDEMQYLAVADEAPVLP
Ga0207708_114998462	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPSAALTWIEPGASATFIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFATRLYRGQVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDEWRDRPGPPALPYLDDINAFMPAAAPLYVT
Ga0257148_10247292	3300026345	Soil	VLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPD
Ga0257180_10026383	3300026354	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGHVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGPPALPYLDDIGAFLP
Ga0257166_10234572	3300026358	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVP
Ga0257176_10234872	3300026361	Soil	VLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDI
Ga0257176_10812332	3300026361	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGHVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERP
Ga0257179_10070701	3300026371	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATAEEVPVLAVLDDWRERPGPPALPY
Ga0257171_10155313	3300026377	Soil	MPRAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGHVTLPELRAFLSRCRITRGALVDDQQYVATAE
Ga0257177_10290411	3300026480	Soil	VLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEE
Ga0257155_10726461	3300026481	Soil	TCSVRSPRSTFATNSRVLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAISGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDE
Ga0257157_10781981	3300026496	Soil	VLDLGVFTTPMPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDINAFM
Ga0256866_10802311	3300027650	Soil	MPSAALTWIEPGASATLIWHGAVASRPEGGRVYVVAGPILEQPPASPYFILAAEEDGDFADRLYRGQVTLPELRAFLSRCRITRGALVDEQQYVATDEEAPVLAALDDWR
Ga0209588_10376501	3300027671	Vadose Zone Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDDW
Ga0209073_101655322	3300027765	Agricultural Soil	MPSTALTWIEPGASATLIWHGAAATGPGGARLYAVSGPALEQPPATPYFLLAPAEVDAFAARLYRGQVSLDDLRAFLAHCRIAQGALVDEMQYLAVADEAPVLPVLDAWREAADVPALPYLDDINAFMPAGPLYVTAEAHAVARREPEQFATA
Ga0209811_104183211	3300027821	Surface Soil	CSRVLDLGVFSTTPMPSAALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATEQEVPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDE
Ga0209180_106888991	3300027846	Vadose Zone Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYVAVAEEVPVLPLLDSWRDAPDVPVLPYLDDINAFMPAAPLYVTADAHA
Ga0209526_104695721	3300028047	Forest Soil	MPSAALTWIEPGASATLVWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDAFAAHLYRGQATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETPVLPLLDEWHAAPDRPLLPYLDDINAFLPGAAPLYVTAEAHAAARREPQQFTTAWVCDE
Ga0307504_102553071	3300028792	Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVTLDDLRTFLAHCRIARGALVDEMQYLAVADEAPVLPVLDAWREAADVPALPYLDDINAFMPAGPLYVTAEAHAVARREPEQFTTAWVCDECGEA
Ga0307305_101732732	3300028807	Soil	MPRTALTWIEPGASATLIWHGAVASQPSGGRLYVVAGPILEQPPASPYFILAAEEDGDFAAQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDQEVPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTA
Ga0307308_102129931	3300028884	Soil	MPRTALTWIEPGASATLIWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRAFLSRCRVTRGALVDDQQYVATDEEVPVLAVLDEWRDRPGPPAL
Ga0308309_100324861	3300028906	Soil	MPSAALTWIEPGASATLVWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDAFAAHLYRGQATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETPVL
Ga0308187_101672842	3300031114	Soil	MPRTALTWIEPGASATLIWHGAVASQPSGGRLYVVAGPILEQPPASPYFILAAEEDGDFAAQLYRGQVTLPELRGFLSRCRVTRGALVDVQQYVATDQEVPVLEVLD
(restricted) Ga0255311_11090131	3300031150	Sandy Soil	MPSAALTWIEPGASATLIWHGAAASRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFAARLYRGQIALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDDWRDRPGPPALPYLDDINAFMSASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAE
Ga0307499_101110062	3300031184	Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAISGPALEQPPASPHFLLAPAEDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVADEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREP
(restricted) Ga0255310_101037741	3300031197	Sandy Soil	MRSAPLTWIEPGASATLIWHGAAASRPGGGHLYSVSGPALEQPPATPYFILAPVEDGAFAGQLYRGQVTLRDLRAFLSRCRTAHGALVDEMQYVATSREAPVLPLLDGWREEAGPPVLPYLDDINAFMPAAAAPL
Ga0307505_101091091	3300031455	Soil	MPSAALTWIEPGASATFIWHGAAAPRPGGGRLYVVSGPILEQPPASPYFILAAEEEGDFATQLYRGQVALPELRAFLSRCRVTRGALVDDQQYVATDEELPVLAVLDDWRDRPGPP
Ga0307469_106555352	3300031720	Hardwood Forest Soil	MPSAALTWIEPGASATLVWHGAMAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDTFAAHLYRGRATLPDLRAFLSRCRIARGAFVEEMQYLAAAEETPVLPLLDEWHAAHDRPLLPYLDDINAFLP
Ga0307469_119230131	3300031720	Hardwood Forest Soil	VLHLGVSETPMRSAAPTWIDPGASATLIWHGATAARPGEGRLYSLSGPAFEQPPASPYFLLASVEDDAFAARLYRGQVTLPDLRTFLGGCRIARGALVEEMQYVMAVE
Ga0307473_110396261	3300031820	Hardwood Forest Soil	MPSAALTWIEPGASATLIWHGAVAPGPGAHRLYSVSGPAFEQPPPSPYFILAPAEDDVFAAHLYRGQATLPDLRAFLSRCRIARGAFVEEMQYLAAAE
Ga0307470_100165173	3300032174	Hardwood Forest Soil	MPSAAVTWIEPGASATLIWHGAAASRADGGRLYVVSGPILEQPPASPYFILAAEEDGDFATRLYRGQVTLADLRAFLARCRLTRGELVDDQQYVATIEELPVLALLDDWRERPGPPALPYLDDINAFLPA
Ga0307471_1001265121	3300032180	Hardwood Forest Soil	MPSTALTWIEPGASATLIWHGAVATGPGGGRLYAVSGPALEQPPASPHFLLAPADDDAFAARLYRGQVTLGDLRAFLARCRIAQGAMVDEMQYLAVAEEAPVLPLLDGWRDAPDVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECG
Ga0335069_105775933	3300032893	Soil	MRSIAPTWIEPGASATLIWHGAVASRPGDGRLYSLSGPAFERPPASPYFLLAPVEAGAFAGRLYRGQVALPELRTFLLGCRIARGALVDEMQYVLAAEEAPVLPLLDAWLDAAAAPALPYLDDINAFMPASAPLYVTADAHAAARREPEQFAT
Ga0214471_102131181	3300033417	Soil	MPSTSTALTWIEPGASATLVWHGAAASQPGGGRLYVVSGPILEQPPASPYFILAAEEDDAFAPRLYRGQVTLPELRAFLSRCRITRGALVDDQQYVATDEEAPVLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAED
Ga0310811_106500552	3300033475	Soil	MPSTALTWIEPGASATLIWHGATATGPGGGRLYAVSGPALEQPPATPYFLLAPVEAETFAPRLYRGQVSLDDLRAFLAHCRIAQGALVDEMQYLAVADEAPVLPVLDAWREAPDVPALPYLDDINAFMPAGPLYV
Ga0326730_11115511	3300033500	Peat Soil	MPSTALTWIEPGASATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVSLDDLRAFLAHCRIAQGALVDEMQYLAVADEVPVLPVLDAWRE
Ga0326731_10148234	3300033502	Peat Soil	MPSTALTWIEPGASATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVSLDDLRAFLAHCRIAQGALVDEMQYLAVADEAPVLPVLDAWREAPDVPALPYLDD
Ga0316628_1019994521	3300033513	Soil	MPSTALTWIEPGTCATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVTLDDLRAFLAHCRIAQGALVDEMQYLAVADEAPVLPVLDAWREAPDVPALPDLDD
Ga0326723_0096002_3_350	3300034090	Peat Soil	LGVVTTPMPSTALTWIEPGASATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVSLDDLRAFLAHCRIAQGALVDEMQYLAVADEAPVLPVLDAW
Ga0364942_0168341_3_320	3300034165	Sediment	MRSAALTWIEPGASATLIWHGAAASRPGGGHLYSVSGPALEQPPATPYFILASVEDGAFAGQLYRGQVTLQDLRAFLSRCRIAHGALVDEMQYVATSDEAAVLPLL
Ga0364934_0164392_2_352	3300034178	Sediment	MPSAALTWIEPGASATLIWHGAVASQPGGGRLYVVSGPILEQPPASPYFILAAEEDGDFAVQLYRGQVTLPELRTFLSRCRVTRGALVDDQQYVATAEEMPVLAVLDDWRERPGPPA
Ga0373948_0142812_1_363	3300034817	Rhizosphere Soil	MPSTALTWIEPGASATLIWHGAAATGPGGGRLYAVSGPALEQPPATPYFLLAPAEADAFAARLYRGQVTLADLRAFLARCRIAQGALVDEMQYLAVAEEAPVLPVLDAWRETPAVPVLPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters