Metagenome Family F099919

Basic Information
Family ID	F099919
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	70 residues
Representative Sequence	VTAEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFILLVALGGLLCAAGIVVYLYSLVSAGGATPEQ
Number of Associated Samples	89
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.52 %
% of genes near scaffold ends (potentially truncated)	26.21 %
% of genes from short scaffolds (< 2000 bps)	83.50 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (57.282 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.650 % of family members)
Environment Ontology (ENVO)	Unclassified (45.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.340 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.24% β-sheet: 0.00% Coil/Unstructured: 37.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03264	Cytochrom_NNT	21.36
PF13442	Cytochrome_CBB3	9.71
PF01594	AI-2E_transport	1.94
PF13607	Succ_CoA_lig	1.94
PF13751	DDE_Tnp_1_6	1.94
PF02661	Fic	1.94
PF13380	CoA_binding_2	1.94
PF06163	DUF977	1.94
PF01120	Alpha_L_fucos	0.97
PF11854	MtrB_PioB	0.97
PF12627	PolyA_pol_RNAbd	0.97
PF00557	Peptidase_M24	0.97
PF13246	Cation_ATPase	0.97
PF01425	Amidase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	21.36
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.94
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.97
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01DVRYC	Not Available	503	Open in IMG/M
2170459017\|G14TP7Y01CKP3Q	Not Available	642	Open in IMG/M
3300002245\|JGIcombinedJ26739_100424702	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300002245\|JGIcombinedJ26739_100430824	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300004479\|Ga0062595_100580929	Not Available	867	Open in IMG/M
3300004479\|Ga0062595_101899218	Not Available	570	Open in IMG/M
3300004479\|Ga0062595_102346648	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005335\|Ga0070666_10075513	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300005336\|Ga0070680_100039015	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300005337\|Ga0070682_100748557	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005338\|Ga0068868_100586935	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005344\|Ga0070661_100212266	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300005353\|Ga0070669_101896679	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005355\|Ga0070671_100231799	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300005434\|Ga0070709_10689634	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005439\|Ga0070711_101836512	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005440\|Ga0070705_100286246	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005444\|Ga0070694_101027194	Not Available	685	Open in IMG/M
3300005445\|Ga0070708_100011559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7187	Open in IMG/M
3300005459\|Ga0068867_100988196	Not Available	762	Open in IMG/M
3300005536\|Ga0070697_100677594	Not Available	909	Open in IMG/M
3300005545\|Ga0070695_100568272	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005547\|Ga0070693_100306634	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005548\|Ga0070665_100093913	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300005610\|Ga0070763_10937967	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005841\|Ga0068863_100450063	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005994\|Ga0066789_10172229	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300006052\|Ga0075029_100100969	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300006059\|Ga0075017_100527826	Not Available	897	Open in IMG/M
3300006163\|Ga0070715_10429465	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300006173\|Ga0070716_100098754	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300006174\|Ga0075014_100012930	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300006175\|Ga0070712_100061931	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300006237\|Ga0097621_100025321	All Organisms → cellular organisms → Bacteria	4640	Open in IMG/M
3300006358\|Ga0068871_101724220	Not Available	594	Open in IMG/M
3300009098\|Ga0105245_10170353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2073	Open in IMG/M
3300009098\|Ga0105245_11463504	Not Available	734	Open in IMG/M
3300009101\|Ga0105247_10225960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1269	Open in IMG/M
3300009148\|Ga0105243_12926019	Not Available	518	Open in IMG/M
3300009174\|Ga0105241_10412241	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300009174\|Ga0105241_12324985	Not Available	534	Open in IMG/M
3300009176\|Ga0105242_13016110	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009545\|Ga0105237_10180712	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300009545\|Ga0105237_11102053	Not Available	801	Open in IMG/M
3300009551\|Ga0105238_10072829	All Organisms → cellular organisms → Bacteria	3430	Open in IMG/M
3300009551\|Ga0105238_12638665	Not Available	539	Open in IMG/M
3300010375\|Ga0105239_10373100	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300010396\|Ga0134126_10356675	Not Available	1705	Open in IMG/M
3300010401\|Ga0134121_11271266	Not Available	740	Open in IMG/M
3300011271\|Ga0137393_11294378	Not Available	617	Open in IMG/M
3300012004\|Ga0120134_1069275	Not Available	634	Open in IMG/M
3300012189\|Ga0137388_11821718	Not Available	540	Open in IMG/M
3300012189\|Ga0137388_12019297	Not Available	505	Open in IMG/M
3300012199\|Ga0137383_10264784	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300012199\|Ga0137383_10444952	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300012209\|Ga0137379_11572553	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012211\|Ga0137377_11882941	Not Available	516	Open in IMG/M
3300012363\|Ga0137390_10198504	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300012955\|Ga0164298_11588198	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012957\|Ga0164303_11054043	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012958\|Ga0164299_10593404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300012960\|Ga0164301_10652654	Not Available	785	Open in IMG/M
3300014056\|Ga0120125_1025038	Not Available	1266	Open in IMG/M
3300014325\|Ga0163163_10127961	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300014325\|Ga0163163_11394979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300015371\|Ga0132258_11777397	Not Available	1554	Open in IMG/M
3300015374\|Ga0132255_100918354	Not Available	1310	Open in IMG/M
3300017924\|Ga0187820_1134852	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300017927\|Ga0187824_10000105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13699	Open in IMG/M
3300017927\|Ga0187824_10046270	Not Available	1337	Open in IMG/M
3300017930\|Ga0187825_10355481	Not Available	555	Open in IMG/M
3300017993\|Ga0187823_10000199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14623	Open in IMG/M
3300019878\|Ga0193715_1011525	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300019879\|Ga0193723_1067135	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300019890\|Ga0193728_1016540	Not Available	3704	Open in IMG/M
3300019999\|Ga0193718_1071285	Not Available	742	Open in IMG/M
3300020001\|Ga0193731_1013252	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300020004\|Ga0193755_1174021	Not Available	636	Open in IMG/M
3300021178\|Ga0210408_11402934	Not Available	526	Open in IMG/M
3300021479\|Ga0210410_10916420	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300024178\|Ga0247694_1021997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300025898\|Ga0207692_10628719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300025903\|Ga0207680_10393996	Not Available	978	Open in IMG/M
3300025911\|Ga0207654_11036755	Not Available	597	Open in IMG/M
3300025912\|Ga0207707_10647106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300025927\|Ga0207687_10231442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1460	Open in IMG/M
3300025927\|Ga0207687_11257286	Not Available	636	Open in IMG/M
3300025927\|Ga0207687_11293660	Not Available	627	Open in IMG/M
3300025941\|Ga0207711_11352824	Not Available	654	Open in IMG/M
3300026035\|Ga0207703_11874725	Not Available	576	Open in IMG/M
3300026041\|Ga0207639_11785860	Not Available	576	Open in IMG/M
3300026538\|Ga0209056_10606785	Not Available	552	Open in IMG/M
3300027583\|Ga0209527_1027352	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300027651\|Ga0209217_1039986	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300027667\|Ga0209009_1152148	Not Available	588	Open in IMG/M
3300027911\|Ga0209698_10019170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6543	Open in IMG/M
3300028047\|Ga0209526_10240593	Not Available	1241	Open in IMG/M
3300031231\|Ga0170824_115035446	Not Available	1050	Open in IMG/M
3300031231\|Ga0170824_117810493	Not Available	525	Open in IMG/M
3300031720\|Ga0307469_10148789	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300032180\|Ga0307471_100008572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6698	Open in IMG/M
3300032205\|Ga0307472_100271188	Not Available	1345	Open in IMG/M
3300034195\|Ga0370501_0035236	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.02%
Host-Associated	Host-Associated	33.01%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.28%
Plants	Host-Associated → Plants	33.01%
Aquatic	Environmental → Aquatic	8.74%
Solid Waste	Engineered → Solid Waste	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.80%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Sediment	Environmental → Aquatic → Sediment	3.88%
Roots	Host-Associated → Plants → Roots	3.88%
Grass	Engineered → Solid Waste → Grass	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.98%
Loam	Environmental → Terrestrial → Soil → Loam	21.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Composting	Engineered → Solid Waste → Grass → Composting	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_6425770	2032320005	Soil	VKAAIGGLERRLRLAGMLLIVGLLVEAICLLWARPLAFILLVCGGGLLCAAGIVVYLYSLVAAGEATSK
4ZMR_00023010	2170459017	Switchgrass, Maize And Mischanthus Litter	MAQTLVLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVAASEATPEA
JGIcombinedJ26739_1004247023	3300002245	Forest Soil	VTAAKVVIEKRLRMAGVLLIVGLLVEAICLQWARPIAFILLVVVGGLLCCCGIVVYLYS
JGIcombinedJ26739_1004308243	3300002245	Forest Soil	VTAEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFILLVALGGLLCAAGIVVYLYSLVSAGGATPEQ*
Ga0062595_1005809292	3300004479	Soil	MTARVNLEKRLRWAGMLVVAGLLVEGICLLSARPIAFIVLVVVGGFLCAAGIVVYLYSLLPAGGTTHER*
Ga0062595_1018992181	3300004479	Soil	MTAPIGGFEKRLQLAGVLLIIGLLLEAICLLWARPLAFILLVCGGGLLCAAGIAVFLYSLVSTGEETPKR*
Ga0062595_1023466482	3300004479	Soil	MTASMDGLEKKLRLAGMLLIVGLLVEAICLLWARPLAFILLVGVGGLLCAAGIVAYLYSLVSTSDANRGP*
Ga0070666_100755133	3300005335	Switchgrass Rhizosphere	MTEAALGFAKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP*
Ga0070680_1000390154	3300005336	Corn Rhizosphere	MTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP*
Ga0070682_1007485572	3300005337	Corn Rhizosphere	VTEATVGLTKRLRLAGMLLISGLLVEGICLLWVRPLAFIFLVCVGGLLVAAGICVFLFSLVSTGEAVPEQ*
Ga0068868_1005869352	3300005338	Miscanthus Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVSSGEATPEL*
Ga0070661_1002122663	3300005344	Corn Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP*
Ga0070669_1018966791	3300005353	Switchgrass Rhizosphere	LERRQVTEAALGFAKRLRLAGMLLISGLLVEGICLLWVRPLTFILLVCGGGLLCAAGIVVYLYSLVSAGEAAPEP*
Ga0070671_1002317992	3300005355	Switchgrass Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCAAGVVVYLYSLVSAGEATPGP*
Ga0070709_106896342	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDGLEKKLRLAGMLLIVGLLVEAICLLWARPLAFILLVGVGGLLCAAGIVAYLYSLVSTSDANRGP*
Ga0070711_1018365121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EILEGSQLMATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP*
Ga0070705_1002862461	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPIGGFEKRLQFAGVLLIIGLLLEAICLLWARPLAFILLVCGGGLLCAAGIAVFLYSLVSTGEETPKR*
Ga0070694_1010271941	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTEAALGFAKRLRLAGMLLISGLLVEGICLLWVRPLTFILLVCGGGLLCAAGIVVYLYSLVSAGEAAPEP*
Ga0070708_1000115595	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTPEIVGLEKPLRLAGMLLIFGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAARVRPEQ*
Ga0068867_1009881961	3300005459	Miscanthus Rhizosphere	MTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYS
Ga0070697_1006775942	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTASIGGLEKQLRLAGMLLIFGLLVEAICLLWARPLAFILLVCAGGLLCAAGIVVYLSSLVSTSEI
Ga0070695_1005682722	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTSEIIGLEKRLRLSGVLLILGLLVEAICLLWARPLAFIVLVGAGGLLCAAGIAVYLYSLVSAARVRPEQ*
Ga0070693_1003066342	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGLEKRLRWSGITLIIGLVVEAICLLWARPIAFIVLVCVGGLLCAAGIIMYLYSLVSAGEPTHSR*
Ga0070665_1000939131	3300005548	Switchgrass Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVSSGEVTPGP*
Ga0070763_109379672	3300005610	Soil	QRRPVEPSKVLEGKPVTAAIVGIEKRLRMAGVLLIVGLLVEAICLQWARPLAFILLVVVGGALCAAGIVVYLYSLVSVGEVNPER*
Ga0068863_1004500631	3300005841	Switchgrass Rhizosphere	TQCRPVEQSEILEGSQLMATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGFLCAAGVVVYLYSLVSAGEATPGP*
Ga0066789_101722292	3300005994	Soil	VTAAIVGLEKKLRLAGRLLTVGLLVEAVCLLWARPLAFIVLVAVGGCLCAAGIVVYLYSLVSASDATPER*
Ga0075029_1001009692	3300006052	Watersheds	VTAALVGLKERLRLPGMLLTFGLLVESICPLWARPIAFILLLMAAGFLCAARTAVYLYSLVSAGGATPER*
Ga0075017_1005278263	3300006059	Watersheds	MATTLALEKRLRIAGILVILGLLVEGICLLRSGPLAFILLVGVGGLLCVAGIAVYLYSLVAASEVTPES*
Ga0070715_104294652	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VTSITGLEKRLRLAGMLLIFGLFVEGICLLWARPLAFILLVCGGGLLCATGIVVFLYSLVAAGEATPE*
Ga0070716_1000987542	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTASIGGLEKQLRLAGMLLIFGLFVEAICLLWARPLAFILLVCAGGLLCAAGIVVYLYSLVSTGETNRGS*
Ga0075014_1000129302	3300006174	Watersheds	VTAALVGLKERLRLPGMLLTFGLLVESICPLWARPIAFILLLMAAGFLCAAGTAMYLYSLVSAGGATPER*
Ga0070712_1000619311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKASIGGLERRLRLAGMLLIVGLLVEAICLLWARPLAFILLVCGGGLLCAAGIVVYLYSLVAAGEATSK*
Ga0097621_1000253215	3300006237	Miscanthus Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGFLCAAGVVVYLYSLVSAGEATPGP*
Ga0068871_1017242201	3300006358	Miscanthus Rhizosphere	MTASMDGLEKKLRLAGMLLIVGLLVEAICLLWARPLAFILLVGVGGWLCAAGIVAYLYSLVSTSDANRGP*
Ga0105245_101703532	3300009098	Miscanthus Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVSSGEATPEL*
Ga0105245_114635042	3300009098	Miscanthus Rhizosphere	MTVTIMGLQKRLRWSGITLIIGLVVEAICLLWARPIAFIVLVCVGGLLCAAGIIMYLYSLVSAGEPTHSR*
Ga0105247_102259603	3300009101	Switchgrass Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGFLCAAGVVVYLYSLVSAGEATPGP*
Ga0105243_129260192	3300009148	Miscanthus Rhizosphere	VTEAALGFAKRLRLAGMLLISGLLVEGICLLWVRPLTFILLVCGGGLLCAAGIVVYLYSLVSPGEAAPEP*
Ga0105241_104122412	3300009174	Corn Rhizosphere	MTASMDGMEKKLRLAAMLLIVGLLVEAICLLWARPLAFILLVGVGGWLCAAGIVAYLYSLVSTSDANRGP*
Ga0105241_123249852	3300009174	Corn Rhizosphere	KRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP*
Ga0105242_130161101	3300009176	Miscanthus Rhizosphere	LERRQMTEAALGFTKRLLLARMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP*
Ga0105237_101807122	3300009545	Corn Rhizosphere	MTVTIMGLQKRLRWSGITLIIGLVVEAICLLWARPIAFIVLVCVGGLFCAAGIIMYLYSLVSAGEPTHSR*
Ga0105237_111020531	3300009545	Corn Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRARPLAFIFLVGVGGLLCVAGIVVYLYSLVSSGEATPEL*
Ga0105238_100728295	3300009551	Corn Rhizosphere	ATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGFLCAAGVVVYLYSLVSAGEATPGP*
Ga0105238_126386651	3300009551	Corn Rhizosphere	SEILEGSQLMAKTLRLEKRLRLAGILVILGLLVEGVCLLGAGPLAFIFLVAVGGFLCAAGIVVYLYSLVSSGEATPEL*
Ga0105239_103731001	3300010375	Corn Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP*
Ga0134126_103566752	3300010396	Terrestrial Soil	MTEAALGFAKRLRLAGMLLIAGLIVDRVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP*
Ga0134121_112712662	3300010401	Terrestrial Soil	MTATIAGLEKRLRIAGLLLILGLGVEGVCLLWARPIAFIFLVVVGGLLCAAGIVLYLYSLVSVGEAASER*
Ga0137393_112943781	3300011271	Vadose Zone Soil	VGIEKRLRLAGLLLIVGLLVEAVCLQWARPLAFILLVVVGGILCAAGIAVYLYALVSASEVKPEP*
Ga0120134_10692752	3300012004	Permafrost	VTAEIVGLEKRLRLAGMLLISGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPEQ*
Ga0137388_118217181	3300012189	Vadose Zone Soil	VTAATVGIEKRLRLAGLLLIVGLLVEAVCLQWARPLAFILLVVVGGILCAAGIAVYLYALVSASEVKPEP*
Ga0137388_120192971	3300012189	Vadose Zone Soil	VTTETAGRLEKRLRLAGRLLIFGLLVEAICLLWARPVAFILLVAAGGFLCAAGIVVYLYSLVSAGETAPEQ*
Ga0137383_102647843	3300012199	Vadose Zone Soil	VTAEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPEQ*
Ga0137383_104449522	3300012199	Vadose Zone Soil	VTEGSVGIEKGLRLAGMLVIFGLLVEAGCLLWARPLAFILLVGVGGLLCAAGIVVYLYSLVSARPAKAGTMNRSADLG*
Ga0137379_115725531	3300012209	Vadose Zone Soil	ERSPVTSITGLEKRLRLAWMLLIFGLFVEGICLLWARPLAFILLVCGGGLLCATGIVVFLYSLVAAGEATPQ*
Ga0137377_118829412	3300012211	Vadose Zone Soil	VTPEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPEQ*
Ga0137390_101985044	3300012363	Vadose Zone Soil	VTAATVGIEKRLRLAGLLLIVGLLVEAVCLQWARPLAFILLVVVGGILCAAGIAVYLYALVSASEAKPEP*
Ga0164298_115881981	3300012955	Soil	HGTTKQGEVLERRQVTEATVGLTKRLRLAGMLLISGLLVEGICLLWVRPLAFIFLVCVGGLLVAAGICVFLFSLVSTGEAVPEQ*
Ga0164303_110540432	3300012957	Soil	KVLEGRQVTAVIVGLEKRLRLAGLLLIVGLLVEAICLQWARPIAFILLVVVGGLLCCCGIAVYLYSLVSIGETTPSP*
Ga0164299_105934042	3300012958	Soil	MKAGVFGLARRLRLAGMLLISGLLVEGVCLLWARPLAFILLVCGGGLLCAAGIAVYLYSLVSAGEVAPEP*
Ga0164301_106526542	3300012960	Soil	MKAGAFGLAGRLRLAGMLLISGLLVEGVCLLWARPLAFILLVCGGGLLCAAGIAVYLYSLVSAGEVAPEP*
Ga0120125_10250382	3300014056	Permafrost	VTDGIVGIEKRLRLAGMLLIFGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPEQ*
Ga0163163_101279614	3300014325	Switchgrass Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEATPEL*
Ga0163163_113949792	3300014325	Switchgrass Rhizosphere	ERRQMTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP*
Ga0132258_117773971	3300015371	Arabidopsis Rhizosphere	MTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSL
Ga0132255_1009183542	3300015374	Arabidopsis Rhizosphere	MTAPIGGFEKRLQFAGVLLIIGLLLEAICLPWARPVAFILLVCGGGLLCAAGIAVFLYSLVSTGEETPKR*
Ga0187820_11348521	3300017924	Freshwater Sediment	LRLAGMLLIIGLLVEAVCLLWARPLAFILLVVAGGLLCISGIAVYLYSLVSVDQAASER
Ga0187824_1000010510	3300017927	Freshwater Sediment	VTAAINELGKRLRLAGMLLIIGLLVEAVCLLWARPLAFILLVVAGGLLCISGIAVYLYSLVSVDQAASER
Ga0187824_100462703	3300017927	Freshwater Sediment	MSALQKRLRFAGMLLISGLLVEAICLLWARPLAFILLVAAGGLLCVGGIIVYLYSLVSAGEET
Ga0187825_103554811	3300017930	Freshwater Sediment	VKMSALQKRLRFAGMLLISGLLVEAICLLWARPLAFILLVAAGGLLCVGGIIVYLYSLVSAGEET
Ga0187823_100001996	3300017993	Freshwater Sediment	VTAAINELEKRLRLAGMLLIIGLLVEAVCLLWARPLAFILLVVAGGLLCISGIAVYLYSLVSVDQAASER
Ga0193715_10115251	3300019878	Soil	VTEATVRLDKRLRLAGTLLIFGLLVEATCLLWARPLAFILLVCGGGLLCSAGIVVYL
Ga0193723_10671352	3300019879	Soil	VTAEIVGLEKRLRLAGMLLIFGLLVEGICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRVRPEQ
Ga0193728_10165403	3300019890	Soil	VKAAIGGLEKRLRLAGMLLIIGLLVEAICLLWARPLAFILLVCAGGLLCAAGIVVFLYSLVSAGEETPKR
Ga0193718_10712852	3300019999	Soil	VTEATVRLDKRLRLAGTLLIFGLLVEATCLLWARPLAFILLVCGGGLLCSAGIVVYLYSLVSS
Ga0193731_10132522	3300020001	Soil	VTEATVRLDKRLRLAGTLLIFGLLVEATCLLWARPLAFILLVCGGGLLCSAGIVVYLYSLVSSGVATREQ
Ga0193755_11740211	3300020004	Soil	MTAATFGLAKRLRLAGMLLISGLLVEGICLLWARPLAFILLVCGGGLLFAAGIVVYLYSLVSTGEVAPEL
Ga0210408_114029342	3300021178	Soil	MTAVIVGIEKRLRLAGLLLIVGLLVEAICLQWARPIAFIFLVVVGGLLCCCGIIVYLYSLVSASEANPDR
Ga0210410_109164202	3300021479	Soil	VTAAKVVIEKRLRMAGVLLIVGLLVEAICLQWARPIAFILLVVVGGLLCCCGIVVYL
Ga0247694_10219972	3300024178	Soil	MTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP
Ga0207692_106287191	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSFQRLPRCCTQCRTTKHREVLERSPVTSITGLEKRLRLAGMLLIFGLFVEGICLLWARPLAFILLVCGGGLLCATGIVVFLYSLVAAGEATPE
Ga0207680_103939962	3300025903	Switchgrass Rhizosphere	MTEAALGFAKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAEPEP
Ga0207654_110367552	3300025911	Corn Rhizosphere	PVEQSEILEGSQLMATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP
Ga0207707_106471062	3300025912	Corn Rhizosphere	VTEATVGLTKRLRLAGMLLISGLLVEGICLLWVRPLAFIFLVCVGGLLVAAGICVFLFSLVSTGEAAPEQ
Ga0207687_102314422	3300025927	Miscanthus Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVSSGEATPEL
Ga0207687_112572862	3300025927	Miscanthus Rhizosphere	VTIMGLQKRLRWSGITLIIGLVVEAICLLWARPIAFIVLVCVGGLLCAAGIIMYLYSLVSAGEPTHSR
Ga0207687_112936601	3300025927	Miscanthus Rhizosphere	MTEAALGFTKRLRLAGMLLIAGLIVEGVCLLWVRPVTFILLVCGGGLLCAAGIVVYLYSLVSAGEAAPEP
Ga0207711_113528242	3300025941	Switchgrass Rhizosphere	MATTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLVSSGEATPEL
Ga0207703_118747252	3300026035	Switchgrass Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVGVGGLLCVAGIAVYLYSLV
Ga0207639_117858602	3300026041	Corn Rhizosphere	MAKTLRLEKRLRLAGILVILGLLVEGVCLLRAGPLAFIFLVTVGGLLCVAGIAVYLYSLVSSGEVTPGP
Ga0209056_106067851	3300026538	Soil	VTAEIVGLEKRLRLAGMLVIFGLLVEAACLLWARPLAFILLVGVGGLLCAAGIVVYLYSL
Ga0209527_10273521	3300027583	Forest Soil	VTAAKVVIEKRLRMAGVLLIVGLLVEAICLQWARPIAFILLVVVGGLLCCCGIVVYLYSLVSAGGAT
Ga0209217_10399862	3300027651	Forest Soil	VTAEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFILLVALGGLLCAAGIVVYLYSLVSAGGATPEQ
Ga0209009_11521482	3300027667	Forest Soil	VTAEIVGLEKRLRLAGMLLISGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPEQ
Ga0209698_100191703	3300027911	Watersheds	VTAALVGLKERLRLPGMLLTFGLLVESICPLWARPIAFILLLMAAGFLCAARTAVYLYSLVSAGGATPER
Ga0209526_102405932	3300028047	Forest Soil	VTAEIVGLEKRLRLAGMLLIFGLLVEAICLLWARPLAFILLVALGGLLCAAGIVVYLYSLVSAGEARPDR
Ga0170824_1150354462	3300031231	Forest Soil	VTAAIVGIEKRLRMAGVLLIVGLLVEAVCLQWARPIAFILLVVVGGLLCCCGIVVYLYSLVSASEANPDR
Ga0170824_1178104931	3300031231	Forest Soil	MKAGAFGFARRLRLAGMLLISGLLVEGVCLLWARPLAFILLVCGGGLLCAAGIAVYLY
Ga0307469_101487892	3300031720	Hardwood Forest Soil	MTAPIGGFEKRLQFAGVLLIIGLLLEAICLLWARPLAFILLVCGGGLLCAAGIAVFLYSLVSTGEETPKR
Ga0307471_1000085727	3300032180	Hardwood Forest Soil	VTDGIVGIEKRLRLAGMLLIFGLLVEAICLLWARPLAFIVLVGAGGFLCAAGIVVYLYSLVSAGRARPQ
Ga0307472_1002711882	3300032205	Hardwood Forest Soil	MTARVNLEKRLRWAGMLVVAGLLVEGFCLLSARPIAFIVLVVVGGFLCAAGIVVYLYSLLPAGGTTHER
Ga0370501_0035236_266_487	3300034195	Untreated Peat Soil	VKAAIVGIEKRLRLAGMLLIFGLGVEAICLQWARPIAFILLVAFGGALCAAGIVVYLYSLASATGASPNRDCD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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