Basic Information | |
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Family ID | F099902 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 137 residues |
Representative Sequence | MDTVFFESTGDRHAQVIGGLSALERRIREVARQGATRAVVAASPVALPRPLPIPVEFVAAGSAPPEGARRERADVIAGIELSDDAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRILARRSLAVTPNHVTI |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 42.57 % |
% of genes near scaffold ends (potentially truncated) | 98.06 % |
% of genes from short scaffolds (< 2000 bps) | 92.23 % |
Associated GOLD sequencing projects | 91 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.65 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.087 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.709 % of family members) |
Environment Ontology (ENVO) | Unclassified (33.010 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (48.544 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 33.54% β-sheet: 15.85% Coil/Unstructured: 50.61% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.65 |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF00005 | ABC_tran | 5.83 |
PF00583 | Acetyltransf_1 | 1.94 |
PF05943 | VipB | 0.97 |
PF00072 | Response_reg | 0.97 |
PF13671 | AAA_33 | 0.97 |
PF01381 | HTH_3 | 0.97 |
PF08681 | DUF1778 | 0.97 |
PF01904 | DUF72 | 0.97 |
PF15780 | ASH | 0.97 |
PF13659 | Obsolete Pfam Family | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG1801 | Sugar isomerase-related protein YecE, UPF0759/DUF72 family | General function prediction only [R] | 0.97 |
COG3517 | Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family | Intracellular trafficking, secretion, and vesicular transport [U] | 0.97 |
COG4453 | Uncharacterized conserved protein, DUF1778 family | Function unknown [S] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 98.06 % |
Unclassified | root | N/A | 1.94 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300004000|Ga0055458_10022957 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1378 | Open in IMG/M |
3300004479|Ga0062595_102413652 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 522 | Open in IMG/M |
3300005334|Ga0068869_100653778 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 893 | Open in IMG/M |
3300005337|Ga0070682_101576450 | All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → Thermotoga → Thermotoga maritima | 567 | Open in IMG/M |
3300005347|Ga0070668_100657777 | All Organisms → cellular organisms → Bacteria | 921 | Open in IMG/M |
3300005354|Ga0070675_101650081 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → Archaeoglobaceae → Archaeoglobus → Archaeoglobus fulgidus | 591 | Open in IMG/M |
3300005365|Ga0070688_100145293 | All Organisms → cellular organisms → Bacteria | 1615 | Open in IMG/M |
3300005406|Ga0070703_10356239 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 626 | Open in IMG/M |
3300005438|Ga0070701_10182671 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1229 | Open in IMG/M |
3300005441|Ga0070700_100413021 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1018 | Open in IMG/M |
3300005444|Ga0070694_100752335 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 796 | Open in IMG/M |
3300005445|Ga0070708_101907357 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 551 | Open in IMG/M |
3300005454|Ga0066687_10934025 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens | 517 | Open in IMG/M |
3300005459|Ga0068867_101023376 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 750 | Open in IMG/M |
3300005466|Ga0070685_10452464 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 900 | Open in IMG/M |
3300005466|Ga0070685_11439471 | All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → Thermotoga → Thermotoga maritima | 530 | Open in IMG/M |
3300005536|Ga0070697_101405632 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 623 | Open in IMG/M |
3300005539|Ga0068853_101754442 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 602 | Open in IMG/M |
3300005544|Ga0070686_100978094 | All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → Thermotoga → Thermotoga maritima | 693 | Open in IMG/M |
3300005546|Ga0070696_101478136 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 581 | Open in IMG/M |
3300005549|Ga0070704_101059518 | All Organisms → cellular organisms → Bacteria | 735 | Open in IMG/M |
3300005598|Ga0066706_11031295 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 632 | Open in IMG/M |
3300005615|Ga0070702_101087969 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 638 | Open in IMG/M |
3300005618|Ga0068864_100454185 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1226 | Open in IMG/M |
3300005618|Ga0068864_102462522 | All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → Thermotoga → Thermotoga naphthophila | 527 | Open in IMG/M |
3300006163|Ga0070715_10834903 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 562 | Open in IMG/M |
3300006846|Ga0075430_101323334 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 592 | Open in IMG/M |
3300006854|Ga0075425_102685223 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 549 | Open in IMG/M |
3300006876|Ga0079217_11606564 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 519 | Open in IMG/M |
3300006880|Ga0075429_101629519 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 561 | Open in IMG/M |
3300006894|Ga0079215_10974940 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 619 | Open in IMG/M |
3300006969|Ga0075419_11320446 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 536 | Open in IMG/M |
3300007076|Ga0075435_100590719 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 963 | Open in IMG/M |
3300007076|Ga0075435_101537474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 584 | Open in IMG/M |
3300009091|Ga0102851_13473058 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 506 | Open in IMG/M |
3300009148|Ga0105243_10572690 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1083 | Open in IMG/M |
3300009162|Ga0075423_10538963 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1228 | Open in IMG/M |
3300010043|Ga0126380_10902684 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 734 | Open in IMG/M |
3300010047|Ga0126382_10253741 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1291 | Open in IMG/M |
3300010344|Ga0116243_10060363 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 3101 | Open in IMG/M |
3300010356|Ga0116237_11083142 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 670 | Open in IMG/M |
3300010359|Ga0126376_11881632 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 638 | Open in IMG/M |
3300010359|Ga0126376_12797636 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 537 | Open in IMG/M |
3300010362|Ga0126377_11913772 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 669 | Open in IMG/M |
3300010362|Ga0126377_12162814 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 633 | Open in IMG/M |
3300010397|Ga0134124_11570119 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 688 | Open in IMG/M |
3300010397|Ga0134124_12128161 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 600 | Open in IMG/M |
3300010403|Ga0134123_13237151 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 524 | Open in IMG/M |
3300012040|Ga0137461_1228019 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 544 | Open in IMG/M |
3300012944|Ga0137410_11423793 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 603 | Open in IMG/M |
3300012948|Ga0126375_12019110 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 510 | Open in IMG/M |
3300012956|Ga0154020_10025399 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 6493 | Open in IMG/M |
3300012971|Ga0126369_13319219 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 527 | Open in IMG/M |
(restricted) 3300013132|Ga0172372_10382157 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 969 | Open in IMG/M |
3300013297|Ga0157378_12177245 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 605 | Open in IMG/M |
3300014325|Ga0163163_12023782 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 636 | Open in IMG/M |
(restricted) 3300014720|Ga0172376_10667512 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 564 | Open in IMG/M |
3300014969|Ga0157376_10118399 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2343 | Open in IMG/M |
3300014969|Ga0157376_10868407 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 918 | Open in IMG/M |
3300014969|Ga0157376_11335405 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 748 | Open in IMG/M |
3300015371|Ga0132258_13447094 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1085 | Open in IMG/M |
3300015374|Ga0132255_105525774 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 535 | Open in IMG/M |
3300018060|Ga0187765_11329269 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 510 | Open in IMG/M |
3300019997|Ga0193711_1048440 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 510 | Open in IMG/M |
3300020140|Ga0179590_1129594 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 686 | Open in IMG/M |
3300021405|Ga0210387_11525575 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 571 | Open in IMG/M |
3300024347|Ga0179591_1133677 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2970 | Open in IMG/M |
3300025925|Ga0207650_11048568 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 694 | Open in IMG/M |
3300025930|Ga0207701_10800774 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 794 | Open in IMG/M |
3300025981|Ga0207640_12142189 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 507 | Open in IMG/M |
3300026023|Ga0207677_11964966 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 544 | Open in IMG/M |
3300026035|Ga0207703_11063337 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 777 | Open in IMG/M |
3300026116|Ga0207674_11242360 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 714 | Open in IMG/M |
3300026118|Ga0207675_101141023 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 799 | Open in IMG/M |
3300028563|Ga0265319_1197280 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 618 | Open in IMG/M |
3300028802|Ga0307503_10929767 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 505 | Open in IMG/M |
3300028824|Ga0307310_10541999 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 589 | Open in IMG/M |
3300029989|Ga0311365_11879742 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 512 | Open in IMG/M |
3300030050|Ga0302255_1074398 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 680 | Open in IMG/M |
3300031200|Ga0307496_10026712 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 870 | Open in IMG/M |
3300031232|Ga0302323_100722807 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1089 | Open in IMG/M |
3300031232|Ga0302323_102791463 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 558 | Open in IMG/M |
3300031538|Ga0310888_10699952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 622 | Open in IMG/M |
3300031548|Ga0307408_102356662 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 516 | Open in IMG/M |
3300031616|Ga0307508_10326946 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1125 | Open in IMG/M |
3300031720|Ga0307469_10921758 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 811 | Open in IMG/M |
3300031726|Ga0302321_101312700 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 831 | Open in IMG/M |
3300031771|Ga0318546_11175446 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 539 | Open in IMG/M |
3300031901|Ga0307406_10055416 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2534 | Open in IMG/M |
3300031902|Ga0302322_102065389 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 700 | Open in IMG/M |
3300031912|Ga0306921_12770505 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 502 | Open in IMG/M |
3300032012|Ga0310902_11065277 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 564 | Open in IMG/M |
3300032013|Ga0310906_10916476 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 626 | Open in IMG/M |
3300032174|Ga0307470_11129525 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 632 | Open in IMG/M |
3300032211|Ga0310896_10826276 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 532 | Open in IMG/M |
3300033158|Ga0335077_10933547 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 871 | Open in IMG/M |
3300033408|Ga0316605_10092041 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2312 | Open in IMG/M |
3300033408|Ga0316605_11280616 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 709 | Open in IMG/M |
3300033412|Ga0310810_10695763 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 947 | Open in IMG/M |
3300033433|Ga0326726_11184551 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 743 | Open in IMG/M |
3300033493|Ga0316631_10139948 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 891 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 9.71% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 7.77% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 6.80% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 5.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.88% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.88% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 3.88% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.88% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.91% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.91% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 1.94% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.94% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.94% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.94% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.94% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.94% |
Anaerobic Digestor Sludge | Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge | 1.94% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.97% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.97% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.97% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.97% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.97% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.97% |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.97% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.97% |
Active Sludge | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge | 0.97% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300004000 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005454 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 | Environmental | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300009091 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010344 | AD_JPASca | Engineered | Open in IMG/M |
3300010356 | AD_USDEca | Engineered | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012040 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2 | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012956 | Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG | Engineered | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013132 (restricted) | Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014720 (restricted) | Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m | Environmental | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
3300019997 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2 | Environmental | Open in IMG/M |
3300020140 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300024347 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Host-Associated | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
3300029989 | III_Fen_N1 coassembly | Environmental | Open in IMG/M |
3300030050 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4 | Environmental | Open in IMG/M |
3300031200 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S | Environmental | Open in IMG/M |
3300031232 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3 | Environmental | Open in IMG/M |
3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Host-Associated | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031726 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1 | Environmental | Open in IMG/M |
3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300033493 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0055458_100229571 | 3300004000 | Natural And Restored Wetlands | VETVFFEATDDLHVQVVGGLTALERRVREAAKQGATRVVVAAAPVEFPRPLPIPVEFVAPGTPAPAGARCERADVIAGVELGDEAARRRAEWTLIRGMNKSYEGPVD |
Ga0062595_1024136522 | 3300004479 | Soil | VESVAFLETTGDRHTQLIAGLTVLERRIRDVAKAGATRAVVAAAPVEIARPLPIPVEFVPPGTAAPAGAQRERADVIAGIELVDDAARRNAEWKLIRGMNKSYEGPVDALINWRFSMRITRV |
Ga0070683_1022614731 | 3300005329 | Corn Rhizosphere | VDTVAYLQTTGDRHAQLVGGLTVLERRVRELAKAGVTRALIATEPMELSRPMPISIQFVPPGSPIPDGARVERADVIAGIEIVDDQARRDAEWKLIRGMNKSFEGPVDALINWRFSM |
Ga0068869_1006537781 | 3300005334 | Miscanthus Rhizosphere | MDTVYFESAGDRHTWMIGGLSALERRIREVARQGATRAVIATAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITR |
Ga0070682_1015764501 | 3300005337 | Corn Rhizosphere | VIAFLETTGDRHTQVVGGLTALERRIRELAKAGATKVVVAAAPVAIARPLPVPVEYVAPGSAVPEGATRERADVIAGVELVDDAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLSHRSLAVTPNHVTVTAIIVGLLAAGLMAHG |
Ga0070668_1006577771 | 3300005347 | Switchgrass Rhizosphere | VFVRSTFPGRARAQEGPGRLVVDPGVVETVFFEAADDRHAQVIGGVTALERRIREVAKQGAGRAVVAAAPVEFPRPLPIPVEFVPVGSEPPEGARRERADVIAGVELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRLLARRSLAVTPNHVTITAILVGLAASLVASRAGYAEF |
Ga0070675_1016500811 | 3300005354 | Miscanthus Rhizosphere | ELAITTEHRTHDRRRSPWYAARELSPMDTVYFESSGDRHTWMIGGLSALERRIREVARQGATRAVIAAAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITRVLARRSLTVTPNHVTIAAILVGLVASALASRGSYAMLALAGVLLEVNSIL |
Ga0070688_1001452931 | 3300005365 | Switchgrass Rhizosphere | VFFEAADDRHAQVIGGVTALERRIREVAKQGAGRAVVAAAPVAFPRPLPIPVEFVPVGSEPPEGARRERADVIAGVELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRLLARRSLAVTPNHVTI |
Ga0070703_103562391 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | VETVAFLETTGDRHTQVVGGLTALERRVREVAKAGATRAVIAAAPVDIARPLPIPVEFVPPGSAAPAGAQRERADVIAGIELVDDEARRKAEWALIRRMNKSYEGPVDALINWRFSMRIT |
Ga0070701_101826712 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MHAAGVEVFFETTDDRHAQVIGGLTAIERRVREMAKQGATRAVVAGARVEFARPMPIEVEFVPVGTAPPEGARHERADVIAGVELGDEAARGRAEWALIRRMNKSFEGPVDALINWRFSMRITRILA |
Ga0070700_1004130211 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | VGAAVECRPRVMHAAPVEVFLETTGDRHLQIVGGLTALERRIRELARQGATRAVVAAPAVAFARPLPIAVDFVPAGSAPPEGAQRERADVIAGIELSDEAARGRAEWALIRRMNKSFEG |
Ga0070694_1007523351 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MHAAGVEVFFETTDDRHAQVIGGLTAIERRVREMAKQGATRAVVAGARVEFARPMPIAVEFVPVGTAPPEGARRERADVIAGVELGDEAARGRAEWALIRRMNKSFEGPVDALINWRFSM |
Ga0070708_1019073571 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VETVFFEAADDRHAQVIAGVTALERRVREVARQGATRAVVAAAPVAFPRPLPIPVEFVAVGSAPPEGARRERADVIAGVELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRVL |
Ga0066687_109340251 | 3300005454 | Soil | MTTVFFESTGDRHAQRIGGLSALERRIREAAREGAVRAVVAASPVALPRPLPIPVEFVAAGSPPPEGARRERADVVAGIELTDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTITAI |
Ga0068867_1010233761 | 3300005459 | Miscanthus Rhizosphere | MDTVYFESSGDRHTWMIGGLSALERRIREVARQGATRAVIAAAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRI |
Ga0070685_104524641 | 3300005466 | Switchgrass Rhizosphere | VAVVATVYFEATEDRHALVVGGLTALERRIREVARQGATRAVVAAAPVVFARPMPIAVEFVAAGTPVPEGAQRERADVIAGIELTDEAARRRAEWTLIRRMNKSFEGP |
Ga0070685_114394711 | 3300005466 | Switchgrass Rhizosphere | TRWIKRQFRYLGVIPRRAPASPMTACGTHAGVDAAAREAIVFFETVGERHTLPLGGLTAIERRVREVAKQGAARAIVAGAPVEFPRPLPIPVEFVAPGTAPPEGARRERADVIAGIELVDEPARRAAEWKLIRGLSKGFEGPVDQLINWRFSMRITRVLAQRSLAITPNQVTVVAI |
Ga0070697_1014056321 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MEGGVETVFLETTGARHLLRIGGLTALERRVREAAKQGAQRAVVAAEPVEFPRALPIPVEFVAPGTPAPAGVKVERADVVAGIELVDEAARRRAEWQLLRGMSKSFQGPVDALINWRFSMPITRALAQRSLRLTPNQVTVTSILVGLAA |
Ga0068853_1017544421 | 3300005539 | Corn Rhizosphere | MDTVYFESSGDRHTWMIGGLSALERRIREVARQGATRAVIAAAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITR |
Ga0070686_1009780941 | 3300005544 | Switchgrass Rhizosphere | METVFFETTGERHVQVIGGLTALERRVREVARQGAARAVVAAPPVALPRPLPIPVEFVAVGSAPPAGARRERADVIAGIELGDEAARQRAEWAVIRSMNKSFEGPVDALINWRFSMRITRVLARGPMSVTPNHVTLLAIAVGITAAALVLRGSRLDVAIGGV |
Ga0070696_1014781361 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | VETVAFLETTGDRHTQVVGGLTALERRVREVAKAGATRVVIAAAPVDIARPLPIPVEFVPPGSAAPAGAQRERADVIAGIELVDDEARRKAEWALIRRMNKSYE |
Ga0070704_1010595181 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MHAAGVEVFFETTDDRHAQVIGGLTAIERRVREMAKQGATRAVVAGARVEFARPMPIAVEFVPVGTAPPEGARHERADVIAGVELGDEAARGRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTVVAIVVGLVASWLASRG |
Ga0066706_110312952 | 3300005598 | Soil | VPTVAFLETTGDRHAQVVGGLTALERRIREVAKAGATRAIVAAAPVELARPMPIPVEFVAPGTPAPDGALRERADVIAGVELVDDEARARAEWALIRKMNKSFEGPVDALVNWRFSM |
Ga0070702_1010879691 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MHAAGVEVFFETTDDRHAQVIGGLTAIERRVREMAKQGATRAVVAGARVEFARPMPIAVEFVPVGTAPPEGARRERADVIAGVELGDEAARGRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTVVAIVVGLVASW |
Ga0068864_1004541851 | 3300005618 | Switchgrass Rhizosphere | VTVAYLQSTGDRHAQLVGGLTVLERRVRELAKAGVTRALIATEPMELSRPMPIAIQFVPPGSPVPEGARVERADIIAGIEIVDEEARRDAEWKLIRGMNKSFEGPVDALINWRFSMRITR |
Ga0068864_1024625221 | 3300005618 | Switchgrass Rhizosphere | PWYAAGELSPMDTVYFESAGDRHTWMIGGLSALERRIREVARQGATRAVVATAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTMAAIALGVVGGLLVLTKTYWGLALGGVLIQ |
Ga0070715_108349032 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MASVFFESTGDRHAQRIGGLSALERRIREVARDGATRAVVAASPVELPRPLPIPVEFVAAGSPPPEGARRERADVIAGIELGDEAARQRAEWAVIRSMNKSFEGPVDALINSKLSMRITRVLARTRLTPNHVT |
Ga0075430_1013233341 | 3300006846 | Populus Rhizosphere | VRLAAAGHGISNAVTVAFLETTGDRHTHVIAGLTALERRVREVAKAGATRAVVAAEPVAIARPLPIPVEFVPPGSAAPVGAQRERADVIAGVELVDDEARRKAEWALIRRMNKSYEG |
Ga0075425_1026852231 | 3300006854 | Populus Rhizosphere | VAPELAFLESGPAGGHRMVLGGLTALERRIRELKKVGVTRVVVATEPVAMPAVGGVVVEFVAPGSAAPDGAQRERADVIAGIELVDDAARRNAEWKLIRGMNKSYEGPVDAL |
Ga0079217_116065642 | 3300006876 | Agricultural Soil | VEHVAFLETTGDRHTHVIAGLTVLERRVREVAKAGATRAVVAAEPVTLERALPIPVEFVPPGSAVPEGARRERADVIAGVELVDEAARRQAEWALIRRMNKSYEGPVDA |
Ga0075429_1016295192 | 3300006880 | Populus Rhizosphere | VETVFLETTGARHLVRLGGLTALERRVREVAKQGAQRAVVAAEPVAFPRALPIPVEFVAPGTPAPAGARVERADVVAGIELVDDAARRRAEWQLIRGMSKSFQGPVDAL |
Ga0079215_109749402 | 3300006894 | Agricultural Soil | VEHVAFLETTGDRHTHVIAGLTVLERRVREVAKAGATRAVIAAEPVTLDRALPIPVEFVPPGSAVPEGARRERADVVAGVELVDEAARRQAEWALIRRMNKSYEGPVDALINWRFSMRITRVLARQSLAVTPNHVTVVAILVGLCASLLASRGQYWSFALAGVLL |
Ga0075419_113204461 | 3300006969 | Populus Rhizosphere | LPDFPESFVVDGSGVETVFLETSGERHLARIGGLTALERCVREAAKRGAQRAIVAAEPVEFPRALPIPVDFVPRGTAPPAGARVERADVIAGIELVDDAARKRAEWQLIRGMSKSFQGPVDALINWRMSMPITRVLARRSLALTPNQVTVTSILVGL |
Ga0075435_1005907191 | 3300007076 | Populus Rhizosphere | MEGVVETVFLETTGARHLLRIGGLTALERRVREAAKQGAQRAVVAAEPVAFPRALPIPVEFVAPGTPAPAGVKVERADVVAGIELVDEAARRRAEWQLLRGMSKSFQGPVDALINWRFSMPITRALAQRSLRLTPNQVTVTSILVGLAASVVLLRSSGYPLVAVAG |
Ga0075435_1015374741 | 3300007076 | Populus Rhizosphere | MDTVFFESTGDRHAQRIGGLSALERRIREVARQGATRAVVAASPVELPRPLPIPIEFVAVGSPPPEGARRERADVIAGIELGDEATRRRAEWAVIRRMNKSFE |
Ga0102851_134730581 | 3300009091 | Freshwater Wetlands | VSTVFLETTGDRHLRRIGGLTALERRVRDAAKQGATRVVVGAAPIDFERPLPVPVEFSTTVPDGARVERAEVIEDIELVDDDAVKRAEWALIRRMNKAHEGPVDALINWRFSMRITRALSHRSLAVTPNHVTIAAILVGLAAAA |
Ga0105243_105726903 | 3300009148 | Miscanthus Rhizosphere | MWYSRGVEAAERESVVFFETTGERHALRLGGLTAIERRVREVAKQGAARAIVAGAPVELGRPMPIPVEFVEAGAAPPEGARRERADVIAGVELVDERARREAEWKLIRGMNKAFEGPVDALINWRFSMRITRMLARRSL |
Ga0075423_105389631 | 3300009162 | Populus Rhizosphere | VELVAFLETTGDRHTQVIAGLTALERRVREVAKAGATRAVVAAAPVAIARPLPIPVEFVAPGSTAPPGALRERADVIAGIELVDDEAQRKAEWALIRRMNKSYEGPVDALINWRFSMRITRLLARRSLAITPNHVTVVAILVGLAASV |
Ga0126380_109026842 | 3300010043 | Tropical Forest Soil | MEVFFAATDDSHTQVIGGLSALERRIREVARDGATRAVVAGAPVAFPRPLPIPVAFVPVGSAPPAGARRERADVIAGVELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRLTRALA |
Ga0126382_102537411 | 3300010047 | Tropical Forest Soil | MTLGAMDTVFFESDGDRHAWRIGGVSALERRIREVARQGAARAVVAAAPIAFPRPLPIPVEFVAAGSPPPEGARRERADVIAGIELHDEASRRRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTIAAIVVGLVASLLASRGGYAPLALAGVLL |
Ga0116243_100603635 | 3300010344 | Anaerobic Digestor Sludge | VTATPTAATPTPVSSTVFFTSGPANGHAVLVGGVTALERRVREFAKRGCTRAIVATSAVTFPRPLPIQVEFVAVGSTAPSDALTERADIVAGIEIVDDASRRSAEWKLIRGSNKSFEGPVDALINWRFSMRITRFLSHRSLAITPNHVTACAILLGLFASYVA |
Ga0116237_110831421 | 3300010356 | Anaerobic Digestor Sludge | MSALPTPTTAVSVAYLESAGTGHTVLVGGLTVLERRVRELAKAGIARVVVASEPIEFPRPLPIAVEFVPPGSVPPIGAVRERADVIAGIEIVDDAARRTAEWKLI |
Ga0126376_118816322 | 3300010359 | Tropical Forest Soil | MPQLNAGRASCTLASVEVFLESTGDRHTHVVGGLTALERRIRELARQGATRAVVAAAPVAFPRPLPIPVEFVPVGSAPPEGARRERADVIAGIELADEAARRRAEWALIRRMNKSFEGPVDALINWRFSM |
Ga0126376_127976361 | 3300010359 | Tropical Forest Soil | MDTVFFESTGDRHAQVIGGLSALERRIREVARQGATRAVVAASPVALPRPLPIPVEFVAAGSAPPEGARRERADVIAGIELSDDAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRILARRSLAVTPNHVTI |
Ga0126377_119137722 | 3300010362 | Tropical Forest Soil | LFVVDGSGVESVVFLETTGERHLARIGGLTALERCVREAAKGGAQRAVIAAEPVEFPRMLPIPIEFVPRGTPAPAGARVERADVIAGIELVDEAAQRRAEWQLIRGMSKSFQGPVDALINWRMSMPITRVLARRSLALTPNQVTVTS |
Ga0126377_121628142 | 3300010362 | Tropical Forest Soil | MDTVFFESTGERHAQRIGGLSALERRIREVARDGATRAVVAASPVELPRPLPIPVEFVAVGSPPPEGARRERADVIAGIELGDEATRRRAEWAVIRRMNKSFEGPVDALINWRVSMRITRLLAQ |
Ga0134124_115701191 | 3300010397 | Terrestrial Soil | VETVFFEAADDRHAQVIGGVTALERRIREVAKQGAGRAVVAAAPVEFPRPLPIPVEFVPVGSEPPEGARRERADVIAGIELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLALTPNHVTITAILVGLVASWCASRGG |
Ga0134124_121281611 | 3300010397 | Terrestrial Soil | VETVAFLETTGDRHTQVIAGLTALERRVREVAKAGATRAVVAAAPVELPRPLPIPVEFVPPGSAAPEGATRERADVIAGVELVDDAAGRKAEWALIRRMNKSYEGPVDALINWRFSMRITRVLARRSLKITPNHITLFGIALGFVAVALGWMGG |
Ga0134123_132371511 | 3300010403 | Terrestrial Soil | VDVFFEATDDRHAQVIGGLSALERRIREVARQGATRAVVAASPVAFPRPLPIPVEFVPVGSAPPAGAQRERADVIAGVELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRLTRALARRSLAVTPNHVTIAAILVGLVASLLASRGG |
Ga0137461_12280191 | 3300012040 | Soil | VQAAERESIVFFETTGDRHAQRVGGMMALERRVREVAKQGATRAVVAAPAVEFARPLPIPVEFVGPGTAVPRGAHIERADVIAEIELVDDEARRAAEWKLIRGTSKAFQGPVDALFNWRFSMPITRVLARRSLAVTPNQVTVVSILVGLGAALLVSRGGYAAIA |
Ga0137410_114237931 | 3300012944 | Vadose Zone Soil | MDTVFFESTGERHAQVIGGLTALERRIREVARQGAARAVVAASPVALPRSLPIPVEFVAVGSAPPAGARRERADVVAGIELGDEAARRRAEWALIRTMNKSFEGPVDALVNW |
Ga0126375_120191101 | 3300012948 | Tropical Forest Soil | MHAAGVEVFFETTDDRHAQVIGGLTAIERRVREVAKQGATRAVVAGARVEFARPMPIAVEFVPVGTAPPEGARRERADVIAGVELGDAAARGRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTVVAIVV |
Ga0154020_100253997 | 3300012956 | Active Sludge | VTAVFFEATADRHALIIGGVTAIERRVREVAKQGATKAIVAAAPVVFPRALPIVVEFVAPGSAAPEGARRERADVVAGVELVDEAAREQAEWKLIRGSNKSYEGPVDALINWRFSMR |
Ga0126369_133192191 | 3300012971 | Tropical Forest Soil | MATVFFESTGDRHAQRIGGLTALERRIREVARQGATRAVVAASPVVLPRPLPIPVEFVPVGSTPPDGARRERADVVSGIELVDEAARARAEWALIRRMNKSFEGPVDALINWRFSMRITRILARRSLAVTPNHVTIAAIAIG |
(restricted) Ga0172372_103821571 | 3300013132 | Freshwater | LIVFFTSTDDRHARLIGGITAIERRVRELAKQGATRAIVAALPVETRPLPIPVEWVDAETPPPTGVRVERADVIAGIELADDTACRAAEWKVIRGMNKSFEGPVDALINWRFSMRITRFLSHRSMRVTPNLVTIVAILVGLGAAALA |
Ga0157374_106946971 | 3300013296 | Miscanthus Rhizosphere | MEGVIAFLETTGDRHTQVVGGLTALERRIREVARAGATRAVVAASPVEIARPLPIPVEYVAPGSVAPEGAQRERADVIAGIELVDDEARGRAEWALIRRMNK |
Ga0157378_121772452 | 3300013297 | Miscanthus Rhizosphere | VIAFLETTGDRHAQVVGGLTALERRIRELAKAGATKVVVAAAPVAIARPLPIPVEYVAPGSAAPEGAQRERADVIAGVELVDEAARRNAEWALIRRMNKSFEGPVDALINWRFSMRITRVLSHTSLAFTPNHITICAILVGIFASVLASRGAYLPVAI |
Ga0163163_120237821 | 3300014325 | Switchgrass Rhizosphere | VDTVFFEAADDRHAQVIGGVTALERRIREVARQGVGRAVVAAAPVEFPRPLPIPVEFVPVGSEPPEGARRERADVIAGVELGDEAARRRAEWALIRRMNKTFEGPVDALINWR |
(restricted) Ga0172376_106675121 | 3300014720 | Freshwater | MSAGLLVFFTSTDDRHARLIGGITAIERRVRELAKQGATRAIVAALPVETRPLPIPVEWVDAETPPPTGVRVERADVIAGIELADDTACRAAEWKVSRGMNKSFEGPVDALINWRFSMRITRFLSHRSMRVTPNLVTIVAILVGLGAAALASRGQYLYWAFAG |
Ga0157376_101183991 | 3300014969 | Miscanthus Rhizosphere | VTVAYLQSTGDRHAQLVGGLTVLERRVRELAKAGVTRALIATEPMELSRPMPIAIQFIPPGSPVPEGARVERADIIAGIEIVDEQTRRDAEWKLIRGMNKSFEGPVDALINWRFSMRITRALSQCSLAVTPNHVTIVAIVVGLLASLL |
Ga0157376_108684071 | 3300014969 | Miscanthus Rhizosphere | VPVVAFLETTGDRHVRRVGGVTALERRIRECAKQGADRVIVAAEPVELGRSMPVPVEFVAPGTAAPEGTYTERADVIADIELVDDGATKRAEWALIRRMNKSFEGPVDALINWRFSMRIT |
Ga0157376_113354052 | 3300014969 | Miscanthus Rhizosphere | MAEVTTAYLATTGERHLQLIGGVTALERRVRELAKGGAQKVVVAAPAVEFPRALPVPVEFAATVPAEAERADVIAGIELVDGEACKRAEWALIRRMNKSFEGPVDAL |
Ga0132258_134470942 | 3300015371 | Arabidopsis Rhizosphere | VETVAFLETTGDRHTQVVGGLTALERRIREVAKQGATRVVVAAAPMEIARPLPVPVEYVAHGSAAPDGAKRERADVIAGVELVDEAARGKVEWALIRRMNKSYEGPV |
Ga0132255_1055257742 | 3300015374 | Arabidopsis Rhizosphere | LETVFLETTGDRHAQIVGGLTALERRIRESAKRGAKRVIVAAAPVEIARPLPVPVEYVPAGTSPPEGAQVERADVIAGVELTDDDARKRAEWALIRGMNKSYEGPVDALVNWRFSMRITRWLARMSLRVTPNHVTITAILLGI |
Ga0187765_113292691 | 3300018060 | Tropical Peatland | VETVAFLESTGERHAQLVGGLTVLERRLRELAKAGVTRALIATEPIELSRPMPIPIQFVPPGSPVPEGAQVERADVLLGIEIADEDARRDAEWKLIRGMNKSFEGPVDALINWRFSMRITRVLARQPLALTPNHVTVTAIVVGLLAALLAARGSYAS |
Ga0193711_10484401 | 3300019997 | Soil | VIHPRFVEVFFETTDERHLQIVGGLTALERRIREVARQGATRAVVAAAPVEFPRALPIPVEFVPAGSARPEGARAERADVVAGVELGDEPARARAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTIAAIVVGLVASVL |
Ga0179590_11295941 | 3300020140 | Vadose Zone Soil | VFFEAAGDRHAQVIGGVTALERRIREVARQGAGRAIVAAAPVAFPRPLPIPVEFVPEGSPPPEGARRERADVIAGIELGDEAARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRLLARRSLAVTP |
Ga0210387_115255752 | 3300021405 | Soil | VFLQSTGDGHAAIVGGLTVLERRIRELAKAGAQRALIATAPIELSRPMPIPIQFVPPGSPVPAGVRVERADVLLGIEIADGDARERAEWQLIRGMNKSFEGPVDALINWRFSMRITRQLARRSLALTPNHVTIAAIVVGLFAS |
Ga0179591_11336771 | 3300024347 | Vadose Zone Soil | VFFEAAGDRHAQVIGGVTALERRIREVARQGAGRAIVAAAPVAFPRPLPIPVEFVPEGSPPPEGARRERADVIAGIELGDEAARRRAEWALIRRMNKSFEGPVDALINWR |
Ga0207650_110485682 | 3300025925 | Switchgrass Rhizosphere | VSERQRIVFLESRADQHLMRVGGLTALERRIRELARAGATEAIVAADRVAFARELPIPVRFVASGSAAPVGARCERADFVAGIELTDEAARRRAEWKLIRGMNKSYEGPVDALVNWRFSMRITRVLAQASLALTPNHITVT |
Ga0207701_108007741 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | METVFFETTGERHVQVIGGLTALERRVREVARQGAARAVVAAPPVALPRPLPIPVEFVAVGSAPPAGARRERADVIAGIELGDEAARQRAEWAVIRSMNKSFEGPVDALINWRFSMRITR |
Ga0207640_121421891 | 3300025981 | Corn Rhizosphere | VDTVAYLQTTGDRHAQLVGGLTVLERRVRELAKAGVTRALIATEPMELSRPMPISIQFVPPGSPIPDGARVERADVIAGIEIVDDQARRDAEWKLIRGMNKSFEGPVDALINWRFSMRITRVLARRSMRVTPNHVTVTAILVGLFAA |
Ga0207677_119649662 | 3300026023 | Miscanthus Rhizosphere | VIAFLETTGDRHTQVVGGLTALERRIREVARAGATRAVVAASPVEIARPLPIPVEYVAPGSVAPEGAQRERADVIAGIELVDDEARGRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSMAVTPNH |
Ga0207703_110633372 | 3300026035 | Switchgrass Rhizosphere | MDTVYFESSGDRHTWMIGGLSALERRIREVARQGATRAVIAAAPVAFPRPLPIPVEFVPVGSPPPDGARRERADVIAGIELGDEAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITRWLSHFSLRVTPNQITICAIVVGLFA |
Ga0207674_112423601 | 3300026116 | Corn Rhizosphere | VETVAFLETTGDRHTQLVAGLTALERRVREVAKAGATRVVVAAAPVELPRALPIPVEFVPPGSTPPAGATRERADVIAGVELVDAAAGKKAEWALIRRMNKSYEGPVDALINWRFSMRITRVLA |
Ga0207675_1011410232 | 3300026118 | Switchgrass Rhizosphere | MEAVVETVFLETTGARHLLRLGGLTALERRVREAAKQGAQRAVVAAEPVAFPRALPIPVEFVAPGTAAPAGARVERADVVAGIELVDEDARRQAEWQLIRGMSKSFQGPVDALINWRFSMPITR |
Ga0265319_11972801 | 3300028563 | Rhizosphere | MSQVLACARVDTVAFLETTGARHLEVVGGLTALERRIREVAKAGATRAVIAAAPAEFSRALPIPIEFVAPGSEPPAEARRERADVIAGVELVDEAARARAEWALIRRMNKSFEGPVDALINWRFSMRITRVLSHRSLAVTPNHVTIVAILVGLFATYLASRGHYVTTAIAGVLLE |
Ga0307503_109297671 | 3300028802 | Soil | VESVAFLETTGDRHTRVVGGLTALERRIREVAKQGATRVVVAATPVEIGRPLPIPVEYVVPGSTPPAGATRERADVIAGVELVDDAARAQAEWALIRRMNKSYEGPVDALINWRFSMRITRVLSHASLAVTPNQVTITAILVGLCACWLA |
Ga0307310_105419991 | 3300028824 | Soil | VETVAFLETTEDRHTHVVGGLTVLERRIREVAKAGATRAVVAASRIEMSRPLPIPVEFVAPGTQAPEGARCERADVVAGVELVDEASRSRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLALTPNHVTICAILVGLTASLLAS |
Ga0311365_118797421 | 3300029989 | Fen | VVDAGVAVAFLETTGERHLQRIGGLTALERRVRELAKAGAAKVVIAAELVDLGARKLPVPIEFVAALPADAVSERADVIAGIELVDAAACKRAEWQLIRRMNKSFEGPVDALINWRISMRITRLLARRSLAVTPNHV |
Ga0302255_10743981 | 3300030050 | Fen | MAVVFFEPTGDGHVRLLAGLTVLERRIREAATQGATGAVVAAAPVAFPRALPIPVAFVAPGSAPPEGARREPVEVIAGIELVDDAARRRAEWALIRRMNKSFEGPVDALINWRFSMRLTRLLARRSLAVTPNHVT |
Ga0307496_100267122 | 3300031200 | Soil | MGTVFFESTGERHAIRIGGLSALERRIREVAGQGAARAVVAASPVGLPRPLPIPVEFVPIGSPLPEGARRERADVIAGIELADAAACRRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARQSLAVTPNHVTLTAIAVGLVAS |
Ga0302323_1007228072 | 3300031232 | Fen | VFFESTGDRHTQIVGGLTALERRIREVARQGATRAIVAAAPLEFARPLPIPVEFVGVGSAPPDGARRERADVIAGIELGDEATRARAEWALIRRMNKSFEGPVDALINWRISMRITRLLARRSLAVTPNHVTICAILVGLTASLLASRSGHAMVALAGVLLEVNSI |
Ga0302323_1027914631 | 3300031232 | Fen | VFFESIGERHAQVVGGLTALERRIREVARQGATRAVVAAAPVMFPRPLPIAVEFVAPGTPPPEGARRERADVIAGIELGDESARRRAEWALIRRMNKSFEGPVDALINWRFSMRITRLLARRSLAVTPNHVTITAILVGLAAAWLASRGGYAMLASAG |
Ga0310888_106999522 | 3300031538 | Soil | VETVAFLETTGDRHTVIVAGLTALERRIREVAKAGATRAVIAAAPVDIARPLPIPVEYVAPGSAAPDGARRERADVIAGVELIDAVAAKRAEWALIRRMNKSHEGPVDALINWRFSMRITRVLARMSLGVTPNHVTTVS |
Ga0307408_1023566621 | 3300031548 | Rhizosphere | TTGDRHTQVVAGLTALERRVREVAKAGATRAVIAAAPLEIARPLPIPIEFVPPGSAAPAGAQRERMDVIAGVELVDDDARKRAEWALIRRMNKSYEGPVDALINWRFSMRITRLLARRSLAVTPNHVTIAAILVGLTASVLASRGQWITFAIAGVLLELNSILDS |
Ga0307508_103269461 | 3300031616 | Ectomycorrhiza | MFGRAVVDPGGVETVFFESTDDRHAQVVGGLTALERRIREVARQGAARVIVAATPVAFPRPLPIAVEFVPVGSPAPEGARRERADVIAGIELGDEAARRRAEWALIRRMNKSFEGPVDTLINWRFSMRITRLLARRSL |
Ga0307469_109217582 | 3300031720 | Hardwood Forest Soil | MNTVFFESTGDRHAQRIGGLSALERRIREVARQGATRAVVAASPVELPRPLPIPVEFVPAGSPPPEGARCERADVIAGIALDDEAARRRAEWALIRRMNKSFE |
Ga0302321_1013127001 | 3300031726 | Fen | LEAYLQSTDDRHAQIVGGLTVLERRLRELAKAGVTRAFIAATPIALSRPMPIPIQFVPPGSPVPDGAKIERADTIAGIAIVDEESRKAAEWKLIRGMNKSFEGPVDALINWRFSMRITRVLARQSMKLTPNHVTITAI |
Ga0318546_111754461 | 3300031771 | Soil | VPVVAFLETTGDRHVRRVGGVTALERRIRECAKQGAERVIVAAEPVDLARPMPVPVEFVAPGTPAPAGATAGRADVIADIELVDDGATKRAEWALIRRMNKSFEGPVDALINWRFSMRITRVLS |
Ga0307406_100554161 | 3300031901 | Rhizosphere | VDAAEREAIVFFETVGDRHALPLGGLSAIERRVREVAKQGAARAIVAGAPVTFPRPLPIPVEFVAPGTAPPEGARRERADVIAGIELVDEPARRAAEWKLIRGLSKGFEGPVDQLINWRFSMRITRVL |
Ga0302322_1020653892 | 3300031902 | Fen | VATVFFESTGDNHAHVIAGLTALERRIREVAKQGATRAVVAAAPLAFPRPLPIPVEFVAVGSAPPEGARRERADVIAGIELADPAARARAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARRSLAVTPNHVTICA |
Ga0306921_127705051 | 3300031912 | Soil | PAPAMKVFLETTGINHTRRIGGLSALERRVRELAKRGATEVIVAAAALEFPRPLPIPVAFVAPGSSPPEGARVERGDVIAGIELVDDAARRRAEWAVIRRMNKSFEGPVDALINWRFSMRITRVLAQRSLALTPNHVTIVAIVVGLCASWLASRGDYATFAIAGVLL |
Ga0310902_110652772 | 3300032012 | Soil | VETVAFLETTGDRHTVIVAGLTALERRIREVAKAGATRAVIAAAPVDIARPLPIPVEYVAPGSPAPEGVRRERADVIAGVELTDAEAAKRAEWALIRRMNKSHEGPVDALINWRFSMRITRVLARMSLGITPNHVTTVSILVGLVACWL |
Ga0310906_109164762 | 3300032013 | Soil | VETVAFLETTGDRHTLVVGGLTALERRIREVAKQGAKRVVVAAAPVEIARPLPVPVEYVAPGSAAPEGATRERADVIAGIELVDEAARGRAEWALIRRMNKSWEGPVDALINWRFSMRITRLLARRSLAVTPNHVTIAAILVGLTASWFASRGHW |
Ga0307470_111295252 | 3300032174 | Hardwood Forest Soil | VPVVAFLETTGDRHVQVVGGLTALERRVRECAKAGAERAIVAADPVQFARPMPIPVEFVAPGTAAPAEARRERADVIAEVELVDDAARARAEWALIRRMNKSFEGPVDALVNWRFSMRITRVLSHRSLALTPNHVTICAILVGFLASFFASRGGYANV |
Ga0310896_108262762 | 3300032211 | Soil | VETVAFLETTGDRHTVIVAGLTALERRIREVAKAGATRAVIAAAPVDIARPLPIPVEYVAPGSAAPDGARRERADVIAGVELIDAVAAKRAEWALIRRMNKSHEGPVDALINWRFSMRITRVLARMSLGVTPNHVTTVSIL |
Ga0335077_109335472 | 3300033158 | Soil | VNTVAFLETTGERHAQIVGGLTALERRIREVAKAGATRAVVAAAPIEIARPLPIPVEYVAPGSAAPEGARVERADVIAGIELVDDDARRRAEWALIRRMNKSFE |
Ga0316605_100920411 | 3300033408 | Soil | VSTVFLETTGDRHLRRIGGLTALERRVREAAKQGATRVVVGAAPIDFERPLPVPVEFSTTVPDGARVERAEVIEDIELVDDDAVKRAEWALIRRMNKAHEGPVDALINWRFSMRITRALSHRSLAVTPNHVTIAAILVGLAAAALA |
Ga0316605_112806161 | 3300033408 | Soil | VVITRDVEAAQGESIVFFETTGDRHARRLGGLTALERRVREVAKQGAARAIVAGAPVAFPRPMPIPVEFVEPGAAPPEGARRERADVIAGVELVDEQACRAAEWKLIRGMNKAHEGPVD |
Ga0310810_106957632 | 3300033412 | Soil | VETVAFLETTGDRHTQVIAGLTALERRVREVAKAGATRVVVAAAPVELPRALPIPVEFVPPGSAPPAGATRERADVIAGVELVDAAAGKKAEWALIRRMNKSYEGPVDALINWRFSMRITRVLARRSLAVTPNHVTIAAILVGLTASALAWQ |
Ga0326726_111845511 | 3300033433 | Peat Soil | VETVAFLETTADRHTHVVGGLCVLERRIREVAKAGATRAVVAADAIDFARPLPIPVEFVAPGTPAPDGARRERADVIAGVELVDDAARKQAEWALIRRMNKSFEGPVDALINWRFSMRITRVLARR |
Ga0316631_101399481 | 3300033493 | Soil | VETVFFESAEDRHAQLVGGVTALERRVREVAKQGATRAVVAGAQVVFPRALPIPVEFVAPGSPAPEGARRERADVVAGIELVDAEANRRAEWALIRGLNKSFQGPVDALINWRFSMRITRMLARRSLAITPNHVTMLSILVGITASLLILQRSYATLALG |
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