Metagenome / Metatranscriptome Family F099887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099887
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	101 residues
Representative Sequence	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLIVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG
Number of Associated Samples	86
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.19 %
% of genes near scaffold ends (potentially truncated)	35.92 %
% of genes from short scaffolds (< 2000 bps)	65.05 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (43.689 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (31.068 % of family members)
Environment Ontology (ENVO)	Unclassified (34.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.466 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.02% β-sheet: 3.01% Coil/Unstructured: 87.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF16778	Phage_tail_APC	39.81
PF01391	Collagen	7.77
PF00535	Glycos_transf_2	0.97
PF11450	DUF3008	0.97
PF13884	Peptidase_S74	0.97
PF00801	PKD	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.31 %
Unclassified	root	N/A	43.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
cellular organisms	root	All Organisms → cellular organisms	30.10 %
Viruses	superkingdom	All Organisms → Viruses	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.62 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	12.62 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12.62 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.80 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	9.71 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.88 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.91 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.94 %
Pseudoalteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	9.71 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.88 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2.91 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.94 %
Pseudoalteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	9.71 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.88 %
Llyrvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus	2.91 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.94 %
Pseudoalteromonas luteoviolacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas luteoviolacea	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.42 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	9.71 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.88 %
Synechococcus virus SSKS1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1	2.91 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1.94 %
Pseudoalteromonas luteoviolacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas luteoviolacea	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002154\|JGI24538J26636_10134563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1	589	Open in IMG/M
3300002408\|B570J29032_108797005	Not Available	512	Open in IMG/M
3300002835\|B570J40625_100239337	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300003216\|JGI26079J46598_1045724	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300003346\|JGI26081J50195_1000036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	53152	Open in IMG/M
3300003410\|JGI26086J50260_1015378	All Organisms → Viruses → Predicted Viral	2560	Open in IMG/M
3300003427\|JGI26084J50262_1002445	All Organisms → cellular organisms → Bacteria	9702	Open in IMG/M
3300003620\|JGI26273J51734_10170913	Not Available	559	Open in IMG/M
3300003621\|JGI26083J51738_10009865	All Organisms → Viruses → Predicted Viral	3910	Open in IMG/M
3300004448\|Ga0065861_1205885	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300004460\|Ga0066222_1331077	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	847	Open in IMG/M
3300005934\|Ga0066377_10000180	All Organisms → cellular organisms → Bacteria → Proteobacteria	14377	Open in IMG/M
3300006164\|Ga0075441_10005530	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5584	Open in IMG/M
3300006874\|Ga0075475_10384081	Not Available	567	Open in IMG/M
3300007539\|Ga0099849_1021221	All Organisms → Viruses → Predicted Viral	2825	Open in IMG/M
3300007558\|Ga0102822_1113092	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	639	Open in IMG/M
3300007623\|Ga0102948_1063314	Not Available	1162	Open in IMG/M
3300007623\|Ga0102948_1065140	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1143	Open in IMG/M
3300007630\|Ga0102903_1084392	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	882	Open in IMG/M
3300007725\|Ga0102951_1010639	All Organisms → Viruses → Predicted Viral	3078	Open in IMG/M
3300008964\|Ga0102889_1231408	Not Available	535	Open in IMG/M
3300008996\|Ga0102831_1049892	Not Available	1404	Open in IMG/M
3300009000\|Ga0102960_1203005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300009059\|Ga0102830_1088039	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	924	Open in IMG/M
3300009059\|Ga0102830_1206762	Not Available	574	Open in IMG/M
3300009172\|Ga0114995_10068903	Not Available	1998	Open in IMG/M
3300009420\|Ga0114994_10261775	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1156	Open in IMG/M
3300009436\|Ga0115008_10026913	All Organisms → Viruses → Predicted Viral	4616	Open in IMG/M
3300009495\|Ga0115571_1033958	Not Available	2466	Open in IMG/M
3300009495\|Ga0115571_1035033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	2420	Open in IMG/M
3300009507\|Ga0115572_10013102	All Organisms → cellular organisms → Bacteria	5983	Open in IMG/M
3300010299\|Ga0129342_1106524	Not Available	1048	Open in IMG/M
3300010389\|Ga0136549_10016451	All Organisms → Viruses → Predicted Viral	4629	Open in IMG/M
3300013004\|Ga0164293_10158753	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300013005\|Ga0164292_10190872	Not Available	1466	Open in IMG/M
3300016740\|Ga0182096_1045793	Not Available	1243	Open in IMG/M
3300016791\|Ga0182095_1516558	Not Available	1642	Open in IMG/M
3300017751\|Ga0187219_1008063	All Organisms → Viruses → Predicted Viral	4219	Open in IMG/M
3300017818\|Ga0181565_10021836	All Organisms → cellular organisms → Bacteria	4748	Open in IMG/M
3300017818\|Ga0181565_10488502	Not Available	801	Open in IMG/M
3300017818\|Ga0181565_10488503	Not Available	801	Open in IMG/M
3300017818\|Ga0181565_10955636	Not Available	532	Open in IMG/M
3300017949\|Ga0181584_10808199	Not Available	554	Open in IMG/M
3300017950\|Ga0181607_10062881	All Organisms → Viruses → Predicted Viral	2459	Open in IMG/M
3300017950\|Ga0181607_10095170	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1891	Open in IMG/M
3300017950\|Ga0181607_10239771	Not Available	1045	Open in IMG/M
3300017951\|Ga0181577_10479286	Not Available	781	Open in IMG/M
3300017956\|Ga0181580_10885387	Not Available	558	Open in IMG/M
3300017964\|Ga0181589_10606587	Not Available	695	Open in IMG/M
3300017969\|Ga0181585_10233007	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300018036\|Ga0181600_10047259	All Organisms → Viruses → Predicted Viral	2791	Open in IMG/M
3300018041\|Ga0181601_10035584	All Organisms → Viruses → Predicted Viral	3643	Open in IMG/M
3300018048\|Ga0181606_10063191	All Organisms → Viruses → Predicted Viral	2459	Open in IMG/M
3300018049\|Ga0181572_10480532	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	767	Open in IMG/M
3300018416\|Ga0181553_10075128	All Organisms → Viruses → Predicted Viral	2150	Open in IMG/M
3300018421\|Ga0181592_10786384	Not Available	628	Open in IMG/M
3300018424\|Ga0181591_10138465	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300019261\|Ga0182097_1326643	Not Available	612	Open in IMG/M
3300020151\|Ga0211736_10367854	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300020160\|Ga0211733_11002694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1	1566	Open in IMG/M
3300020188\|Ga0181605_10122145	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300020188\|Ga0181605_10176859	Not Available	984	Open in IMG/M
3300020188\|Ga0181605_10329012	Not Available	630	Open in IMG/M
3300020191\|Ga0181604_10405739	Not Available	586	Open in IMG/M
3300020352\|Ga0211505_1066103	Not Available	875	Open in IMG/M
3300021356\|Ga0213858_10035604	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2401	Open in IMG/M
3300021379\|Ga0213864_10271019	Not Available	862	Open in IMG/M
3300021957\|Ga0222717_10009226	Not Available	6928	Open in IMG/M
3300021957\|Ga0222717_10014893	All Organisms → cellular organisms → Bacteria	5303	Open in IMG/M
3300021958\|Ga0222718_10228019	Not Available	1001	Open in IMG/M
3300021964\|Ga0222719_10084836	All Organisms → Viruses → Predicted Viral	2339	Open in IMG/M
3300021964\|Ga0222719_10667781	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1	593	Open in IMG/M
3300022921\|Ga0255765_1045525	All Organisms → Viruses → Predicted Viral	2642	Open in IMG/M
3300022927\|Ga0255769_10201211	Not Available	880	Open in IMG/M
3300022937\|Ga0255770_10328682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	693	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10006202	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	10243	Open in IMG/M
3300023176\|Ga0255772_10025964	All Organisms → Viruses → Predicted Viral	4482	Open in IMG/M
3300023176\|Ga0255772_10591746	Not Available	514	Open in IMG/M
3300023180\|Ga0255768_10099968	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10025098	All Organisms → Viruses → Predicted Viral	3495	Open in IMG/M
3300024346\|Ga0244775_10004173	All Organisms → cellular organisms → Bacteria	15127	Open in IMG/M
3300024346\|Ga0244775_10274627	Not Available	1401	Open in IMG/M
3300025608\|Ga0209654_1027586	All Organisms → Viruses → Predicted Viral	1987	Open in IMG/M
3300025617\|Ga0209138_1029196	All Organisms → Viruses → Predicted Viral	2284	Open in IMG/M
3300025617\|Ga0209138_1036933	Not Available	1903	Open in IMG/M
3300025626\|Ga0209716_1040653	Not Available	1620	Open in IMG/M
3300025626\|Ga0209716_1138830	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	642	Open in IMG/M
3300025668\|Ga0209251_1145092	Not Available	625	Open in IMG/M
3300025674\|Ga0208162_1053192	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1349	Open in IMG/M
3300025695\|Ga0209653_1001831	All Organisms → cellular organisms → Bacteria	16382	Open in IMG/M
3300025840\|Ga0208917_1249245	Not Available	570	Open in IMG/M
3300025879\|Ga0209555_10133395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas luteoviolacea	1043	Open in IMG/M
3300026085\|Ga0208880_1006882	Not Available	2306	Open in IMG/M
3300027185\|Ga0208672_1023084	Not Available	619	Open in IMG/M
3300027278\|Ga0208439_1088941	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
3300027612\|Ga0209037_1004205	All Organisms → Viruses → Predicted Viral	3831	Open in IMG/M
3300027612\|Ga0209037_1114381	Not Available	656	Open in IMG/M
3300027714\|Ga0209815_1000211	Not Available	44882	Open in IMG/M
3300027788\|Ga0209711_10134809	Not Available	1204	Open in IMG/M
3300027810\|Ga0209302_10412092	Not Available	609	Open in IMG/M
3300031519\|Ga0307488_10009021	All Organisms → cellular organisms → Bacteria	8112	Open in IMG/M
3300033992\|Ga0334992_0000039	Not Available	120470	Open in IMG/M
3300034284\|Ga0335013_0236921	Not Available	1191	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	87.38%
Freshwater	Environmental → Aquatic → Freshwater	7.77%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.88%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	52.43%
Coastal	Environmental → Aquatic → Marine → Coastal	9.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.71%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.77%
Lake	Environmental → Aquatic → Freshwater → Lake	5.83%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.85%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.94%
Inlet	Environmental → Aquatic → Marine → Inlet	1.94%
Strait	Environmental → Aquatic → Marine → Strait	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	31.07%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	13.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.71%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.77%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	31.07%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	13.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.77%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.85%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.88%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.91%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.94%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.94%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.94%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.97%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.97%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.97%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.97%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002154	Marine eukaryotic phytoplankton communities from the South Atlantic Ocean - 30m ANT-15 Metagenome	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003216	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003410	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA	Environmental	Open in IMG/M
3300003427	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300003621	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300016740	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019261	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025668	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300027185	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027612	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24538J26636_101345632	3300002154	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLVVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDG
B570J29032_1087970052	3300002408	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVTTAEFTNLSVKDSLRLGYDKGNTTQYVLVSSGSIAVSGSIDLQGGSFN
B570J40625_1002393373	3300002835	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVTTAEFTNLSVKDSLRLGYDKGNTTQYVLVSSGSIAVSGSIDLQGGSFNVDGVNVLDSAIAFAIALG*
JGI26079J46598_10457242	3300003216	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLNLGYEKDNNTEFVLVSSGSIALSGSIELQGGSYNVDGVSVLDSAIAFAIALG*
JGI26081J50195_100003624	3300003346	Marine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
JGI26086J50260_10153783	3300003410	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDIAVTEAEFERLTVIDTITIGEDNTSGTSVIVSQSIEVSGSINVGPNDAFTVDGVSVLDSAIAFSIALG*
JGI26084J50262_10024453	3300003427	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDITVXQAEFTNLQVRNRIXVGTXNEDGLSILVSGSIETSGSINVVEGEGFTVNGVNVLDSAIAFAIALG*
JGI26273J51734_101709131	3300003620	Marine	YADLSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGTENTSGTSMIVSQSIDVSGSINLGPNDSYNVDGVNVLDSAIAFAIALG*
JGI26083J51738_100098654	3300003621	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDITVEQAEFTNLQVRNRIVVGTENEDGLSILVSGSIETSGSINVVEGEGFTVNGVNVLDSAIAFAIALG*
Ga0065861_12058852	3300004448	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLIVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0066222_13310772	3300004460	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTVSFKGYIEVDVAEFGNLTVRDTLIVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0066377_100001804	3300005934	Marine	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDITVTEAEFERLTVTDRITVGEDNTSGTSLIVSQSIEVSGSVNIGPNDSFNVDGVNVLDSAIAFAIALG*
Ga0075441_100055304	3300006164	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVKDSLQIGYEKDNTTEFVLVSSGSINVSGSIDLQGGSYNVDGVSVLDSAIAFAIALG*
Ga0075475_103840811	3300006874	Aqueous	SAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG*
Ga0099849_10212212	3300007539	Aqueous	MRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGIENTSGTSIIVSQSMEISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0102822_11130922	3300007558	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSIDLQGGGYNVDGVIVLDSAIAFAIALG*
Ga0102948_10633143	3300007623	Water	FTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGTENTSGTSMIVSQSIDVSGSINLGPNDSYNVDGVNVLDSAIAFAIALG*
Ga0102948_10651403	3300007623	Water	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG*
Ga0102903_10843922	3300007630	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFIVGYEKDVNTDYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0102951_10106393	3300007725	Water	MRIDQPSFSGSITQASIAYADLSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGTENTSGTSMIVSQSIDVSGSINLGPNDSYNVDGVNVLDSAIAFAIALG*
Ga0102889_12314081	3300008964	Estuarine	ITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0102831_10498921	3300008996	Estuarine	GSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLGVRDALSVGYEKAVDTEYVIIASGSITISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0102960_12030052	3300009000	Pond Water	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPASTDYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFAIALG*
Ga0102830_10880392	3300009059	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDVAEFTNLSVKDSFIVGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0102830_12067621	3300009059	Estuarine	PSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLGVRDALSVGYEKAVDTEYVIIASGSITISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0114995_100689032	3300009172	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVKDSIQLGYEKDDTTEFVLVSSGSIALSGSIELQGGSYNVDGVSVLDSAIAFAIALG*
Ga0114994_102617753	3300009420	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLVVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0115008_100269133	3300009436	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLIVGSENTSGTSLIVSQSIIVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0115571_10339583	3300009495	Pelagic Marine	MRIDQPSFSGSISQAPSAFADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDVLTVGTENDSGTSLVVSQSILVSGSVNIGPNDSFNVDGVSVLDSAIAFAIALG*
Ga0115571_10350332	3300009495	Pelagic Marine	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTTGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG*
Ga0115572_100131023	3300009507	Pelagic Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTVEFTNLSVRDSLQLGYEKDNTTEFVLVSSGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG*
Ga0129342_11065243	3300010299	Freshwater To Marine Saline Gradient	FTGDIAVTEAEFERLTVTDRITIGADNTSGISVIVSQSIEVSGSINVGPNDAFTVDGVSVLDSAIAFSIALG*
Ga0136549_100164513	3300010389	Marine Methane Seep Sediment	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLGVKDQLKVGYESPESTQYQFELTGSMGISGSIDLREGSFNVDGVSVLDSAIAFAIALG*
Ga0164293_101587533	3300013004	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVTSAEFTNLSVKDSLRLGYDKGNTTQYVLVSSGSIAVSGSIDLQGGSFNVDGVNVLDSAIAFAIALG*
Ga0164292_101908723	3300013005	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVTSAEFTNLSVKDSLRLGYQKGNTTQYVLVASGSLAVSGSIDIQGGSFNVDGVNVLDSAIAFAIALG*
Ga0182096_10457933	3300016740	Salt Marsh	RIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGQENSTGTSLIVSQSVEVSGSINIGPNDSFTVDGVSVLDSAIAFAIALG
Ga0182095_15165581	3300016791	Salt Marsh	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGDISVTEAEFDRLIVNDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG
Ga0187219_10080634	3300017751	Seawater	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLCVKDSLQLGYEKDDTTEFVLVSSGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0181565_100218363	3300017818	Salt Marsh	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTSGTSVIVSQSIQVSGSVNVGPNDSFNVDGVNVLDSAIAFAIALG
Ga0181565_104885021	3300017818	Salt Marsh	MRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGNENTSGTSIIVSQSMDISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0181565_104885031	3300017818	Salt Marsh	MRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGIENTSGTSIIVSQSMDISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0181565_109556361	3300017818	Salt Marsh	FTGSFTGDISVEQAEFTNLTVKDTLRVGTENTSGTSLIVSQSINVSGSINLGPNDAYNVDGVSVLDSAIAFAIALG
Ga0181584_108081991	3300017949	Salt Marsh	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVNDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG
Ga0181607_100628813	3300017950	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGQENSTGTSLIVSQSVEVSGSINIGPNDSFTVDGVSVLDSAIAFAIALG
Ga0181607_100951703	3300017950	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDKAEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0181607_102397711	3300017950	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGEENSSGTSLIVSQSVEVSGSINVGPNDSFTVDGVSVLDSAIAFAIALG
Ga0181577_104792862	3300017951	Salt Marsh	MRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDISVEQAEFTNLTVKDTLRVGTENTSGTSLIVSQSINVSGSINLGPNDAYNVDGVSVLDSAIAFAIALG
Ga0181580_108853872	3300017956	Salt Marsh	MRIDSPSFSGSIDQSPDAYANLSGSFTGSFTGSFTGDISVEVAEFTNLQVKDQLQVGYEKGDNTTYTIINSGSLAISSSIDLEGGNYNVDGVNVLDSAIAFAIALG
Ga0181589_106065873	3300017964	Salt Marsh	LSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGNENTSGTSIIVSQSMDISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0181585_102330071	3300017969	Salt Marsh	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPESTNYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFAIALG
Ga0181600_100472593	3300018036	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDKAEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVSDSAIAFAIALG
Ga0181601_100355843	3300018041	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDRGEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0181606_100631913	3300018048	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGQENSTGTSLIVSQSVEVSGSINVGPNDSFTVDGVSVLDSAIAFAIALG
Ga0181572_104805322	3300018049	Salt Marsh	MRIDSPSFSGSIDQAPSAYADLSGSFTGSFTGSFTGDIAVEQAEFTNLQVKDQFQVGYEKGNNTTYTIINSGSLAISGSIDLEGGSYNVDGVNVLDSAIAFAIALG
Ga0181553_100751281	3300018416	Salt Marsh	LSMRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGNENTSGTSIIVSQSMDISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0181592_107863842	3300018421	Salt Marsh	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYDSPESTNYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFAIALG
Ga0181591_101384654	3300018424	Salt Marsh	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVNDTITIGEENTSGTSVIVSQSIQVSGSVNVGPNDSFNVDGVNVLDSAIAFAIAL
Ga0182097_13266432	3300019261	Salt Marsh	RIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGEENSSGTSLIVSQSVEVSGSINVGPNDSFTVDGVSVLDSAIAFAIALG
Ga0211736_103678541	3300020151	Freshwater	LSGSFTGSFTGSFKGDIEVQSAEFTNLSVKDNLTIGYDKDDTTQYVVIASGSIAVSGSIDLQGGSYNVDGVSVLDSAIAFAIALG
Ga0211733_110026943	3300020160	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVQSAEFTNLSVKDNLTIGYDKDDTTQYVVIASGSIAVSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0181605_101221451	3300020188	Salt Marsh	AYADLSGSFTGSFTGSFTGDITVEVAEFTILSVKDTLTVGQENSTGTSLIVSQSVEVSGSINIGPNDSFTVDGVSVLDSAIAFAIALG
Ga0181605_101768591	3300020188	Salt Marsh	AYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLSLGYEKDNNTEFVLVSSGSIALSGSIELQGGSYNVDGVNVLDSAIAFAIALG
Ga0181605_103290122	3300020188	Salt Marsh	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDRGEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAI
Ga0181604_104057392	3300020191	Salt Marsh	PSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDKAEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0211505_10661033	3300020352	Marine	DSPSFSGSINQAPSAYADLSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTFRVGIENTSGTSMIVSQSIDVSGSINLGPNDSYNVDGVNVLDSAIAFAIALG
Ga0213858_100356042	3300021356	Seawater	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPESTNYQLVLTGSMAMSGSIDLQDGSFNVDGVNVLDSAIAFAIALG
Ga0213864_102710193	3300021379	Seawater	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPELTNYQLVLTGSMAMSGSIDLQDGSFNVDGVNVLDSAIAFAIALG
Ga0222717_100092264	3300021957	Estuarine Water	MRIDQPSFSGSITQASIAYADLSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGTENTSGTSMIVSQSIDVSGSINLGPNDSYNVDGVNVLDSAIAFAIALG
Ga0222717_100148933	3300021957	Estuarine Water	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG
Ga0222718_102280191	3300021958	Estuarine Water	FSGSITQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPASTDYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFAIALG
Ga0222719_100848363	3300021964	Estuarine Water	SITQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESPASTDYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFAIALG
Ga0222719_106677812	3300021964	Estuarine Water	MRIDTPSFSGSITQAPSAYADLSGSFTGSFTGSFTGDISVETAEFTTLDVKERLNVGYENTSFPYTIVNSGSMAISGSIDLQNGGFRVDGVDVLDSAIAFSIAL
Ga0255765_10455253	3300022921	Salt Marsh	YADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDRGEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0255769_102012113	3300022927	Salt Marsh	APSAYADLSGSFTGSFTGSFTGDISVDVAEFTNLSVKDSFRVGYDRGEDTEYVIVSSGSIALSGSIDLQGGSYNVDGVNVLDSAIAFAIALG
Ga0255770_103286822	3300022937	Salt Marsh	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDIAVEQAEFTNLQVKDQFQVGYEKGNNTTYTIINSGSLAISGSIDLEGGSYNVDGVNVLDSAIAFAIALG
(restricted) Ga0233432_100062023	3300023109	Seawater	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLNLGYEKDNNTEFVLVSSGSIALSGSIELQGGSYNVDGVSVLDSAIAFAIALG
Ga0255772_100259641	3300023176	Salt Marsh	RIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGNENTSGTSIIVSQSMDISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0255772_105917462	3300023176	Salt Marsh	MRIDQPSFSGSISQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQLRVGYESSESTNYQLVLTGSMAMSGSIDLQNGSFNVDGVNVLDSAIAFA
Ga0255768_100999681	3300023180	Salt Marsh	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVNDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFA
(restricted) Ga0233438_100250981	3300024255	Seawater	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLNLGYEKDNNTEFVLVSSGSIALSGSIELQGGSYNVDGVNVLDSAIAFAIALG
Ga0244775_100041733	3300024346	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0244775_102746271	3300024346	Estuarine	GSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLGVRDALSVGYEKAVDTEYVIIASGSITISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0209654_10275863	3300025608	Marine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDIEVDTAEFTNLSVKDQIRIGYESPESTDYQLVLSGSMAMSGSIDLQDGSFNVDGVNVLDSAIAFAIALG
Ga0209138_10291961	3300025617	Marine	INQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLNLGYEKDNNTEFVLVSSGSIALSGSIELQGGSYNVDGVSVLDSAIAFAIALG
Ga0209138_10369332	3300025617	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDIAVTEAEFERLTVIDTITIGEDNTSGTSVIVSQSIEVSGSINVGPNDAFTVDGVSVLDSAIAFSIALG
Ga0209716_10406531	3300025626	Pelagic Marine	MRIDQPSFSGSISQAPSAFADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDVLTVGTENDSGTSLVVSQSILVSGSVNIGPNDSFNVDGVSVLDSAIAFAIALG
Ga0209716_11388302	3300025626	Pelagic Marine	MRIDSPIFSGSIEQSLSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTTGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG
Ga0209251_11450921	3300025668	Marine	PSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0208162_10531921	3300025674	Aqueous	MRIDQPSFSGSITQASIAYAELSGSFTGGFTGSFTGDITVEQAEFTNLTVKDTLRVGIENTSGTSIIVSQSMEISGSVNVGPNDSFNVDGVSVLDSAIAFAIALG
Ga0209653_10018314	3300025695	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDITVEQAEFTNLQVRNRIVVGTENEDGLSILVSGSIETSGSINVVEGEGFTVNGVNVLDSAIAFAIALG
Ga0208917_12492452	3300025840	Aqueous	LSAYADLSGSFTGSFTGSFTGDISVTEAEFDRLIVKDTITIGEENTSGTSVIVSQSIQVSGSVNIGPDDSFNVDGVNVLDSAIAFAIALG
Ga0209555_101333953	3300025879	Marine	MRIDSPSFSGSIDQAPSAYADLSGSFTGSFTGSFTGDISVEQAEFTNLQVKDQFQVGYERGENTTYAIIASGSIAISGSIDLEGGNYNVDGVNVLDSAIAFAIALG
Ga0208880_10068823	3300026085	Marine	GSFTGSFTGSFTGDITVTEAEFERLTVTDRITVGEDNTSGTSLIVSQSIEVSGSVNIGPNDSFNVDGVNVLDSAIAFAIALG
Ga0208672_10230841	3300027185	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDVAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0208439_10889412	3300027278	Estuarine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDVAEFTNLSVKDSFIVGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVNVLDSAIAFAIALG
Ga0209037_10042056	3300027612	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFTGDITVEQAEFTNLQVRNRITVGTENEDGLSILVSGSIETSGSINVVEGEGFTVNGVNVLDSAIAFAIALG
Ga0209037_11143811	3300027612	Marine	MRIDQPSFSGSITQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVRDSLAIGYEKDVNTEYVIVASGSISISGSVDLQGGGYNVDGVN
Ga0209815_10002113	3300027714	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDISVDTAEFTNLSVKDSLQIGYEKDNTTEFVLVSSGSINVSGSIDLQGGSYNVDGVSVLDSAIAFAIALG
Ga0209711_101348091	3300027788	Marine	TGSFTGSFKGDIEVDVAEFGNLTVRDTLVVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG
Ga0209302_104120922	3300027810	Marine	MRIDSPSFSGSINQAPSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLVVGSENTSGTSLIVSQSILVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG
Ga0307488_100090214	3300031519	Sackhole Brine	MRIDSPIFSGSIDQATSAYADLSGSFTGSFTGSFKGDIEVDVAEFGNLTVRDTLIVGSENTSGNSLIVSQSIIVSGSVNLGPNDSFNVDGVSVLDSAIAFAIALG
Ga0334992_0000039_117787_118107	3300033992	Freshwater	MRIDAPSFSGSINQAPSAYATLSGSFTGSFTGSFKGDIEVTTAEFTNLSVKDSLRLGYDKGNTTQYVLVSSGSIAVSGSIDLQGGSFNVDGVNVLDSAIAFAIALG
Ga0335013_0236921_929_1189	3300034284	Freshwater	TLSGSFTGSFTGSFKGDIEVTTAEFTNLSVKDSLRLGYDKGNTTQYVLVSSGSIAVSGSIDLQGGSFNVDGVNVLDSAIAFAIALG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters