Basic Information | |
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Family ID | F099819 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 131 residues |
Representative Sequence | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMDGFFQGTGRSAVSFAKKNP |
Number of Associated Samples | 82 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 43.69 % |
% of genes near scaffold ends (potentially truncated) | 32.04 % |
% of genes from short scaffolds (< 2000 bps) | 67.96 % |
Associated GOLD sequencing projects | 76 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (60.194 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (19.417 % of family members) |
Environment Ontology (ENVO) | Unclassified (24.272 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (37.864 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 0.75% β-sheet: 43.61% Coil/Unstructured: 55.64% | Feature Viewer |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF00118 | Cpn60_TCP1 | 19.42 |
PF02515 | CoA_transf_3 | 15.53 |
PF00166 | Cpn10 | 1.94 |
PF05015 | HigB-like_toxin | 0.97 |
PF00496 | SBP_bac_5 | 0.97 |
PF00689 | Cation_ATPase_C | 0.97 |
PF09912 | DUF2141 | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG0459 | Chaperonin GroEL (HSP60 family) | Posttranslational modification, protein turnover, chaperones [O] | 19.42 |
COG1804 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases | Lipid transport and metabolism [I] | 15.53 |
COG0234 | Co-chaperonin GroES (HSP10) | Posttranslational modification, protein turnover, chaperones [O] | 1.94 |
COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 0.97 |
COG3549 | Plasmid maintenance system killer protein | Defense mechanisms [V] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 60.19 % |
Unclassified | root | N/A | 39.81 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300002245|JGIcombinedJ26739_100296947 | All Organisms → cellular organisms → Bacteria | 1500 | Open in IMG/M |
3300004117|Ga0058893_1001114 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1451 | Open in IMG/M |
3300004139|Ga0058897_10029878 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1333 | Open in IMG/M |
3300004139|Ga0058897_10777524 | Not Available | 522 | Open in IMG/M |
3300005174|Ga0066680_10128478 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1573 | Open in IMG/M |
3300005176|Ga0066679_10246908 | All Organisms → cellular organisms → Bacteria | 1149 | Open in IMG/M |
3300005434|Ga0070709_10289991 | All Organisms → cellular organisms → Bacteria | 1192 | Open in IMG/M |
3300005444|Ga0070694_100034981 | All Organisms → cellular organisms → Bacteria | 3317 | Open in IMG/M |
3300005445|Ga0070708_100103477 | All Organisms → cellular organisms → Bacteria | 2610 | Open in IMG/M |
3300005445|Ga0070708_100536756 | All Organisms → cellular organisms → Bacteria | 1103 | Open in IMG/M |
3300005445|Ga0070708_102099007 | Not Available | 523 | Open in IMG/M |
3300005467|Ga0070706_100046370 | All Organisms → cellular organisms → Bacteria | 4012 | Open in IMG/M |
3300005467|Ga0070706_101305264 | Not Available | 665 | Open in IMG/M |
3300005468|Ga0070707_100314913 | All Organisms → cellular organisms → Bacteria | 1521 | Open in IMG/M |
3300005468|Ga0070707_101648074 | Not Available | 608 | Open in IMG/M |
3300005468|Ga0070707_101801147 | Not Available | 579 | Open in IMG/M |
3300005471|Ga0070698_100154904 | All Organisms → cellular organisms → Bacteria | 2237 | Open in IMG/M |
3300005471|Ga0070698_101917293 | Not Available | 545 | Open in IMG/M |
3300005545|Ga0070695_101411056 | Not Available | 578 | Open in IMG/M |
3300005875|Ga0075293_1023982 | Not Available | 788 | Open in IMG/M |
3300005876|Ga0075300_1006586 | All Organisms → cellular organisms → Bacteria | 1219 | Open in IMG/M |
3300005876|Ga0075300_1063519 | Not Available | 548 | Open in IMG/M |
3300005878|Ga0075297_1002298 | All Organisms → cellular organisms → Bacteria | 1474 | Open in IMG/M |
3300005878|Ga0075297_1018323 | Not Available | 734 | Open in IMG/M |
3300005879|Ga0075295_1000022 | All Organisms → cellular organisms → Bacteria | 3464 | Open in IMG/M |
3300005880|Ga0075298_1022163 | Not Available | 607 | Open in IMG/M |
3300005888|Ga0075289_1048842 | Not Available | 661 | Open in IMG/M |
3300005890|Ga0075285_1008391 | All Organisms → cellular organisms → Bacteria | 1124 | Open in IMG/M |
3300006041|Ga0075023_100032885 | All Organisms → cellular organisms → Bacteria | 1537 | Open in IMG/M |
3300006172|Ga0075018_10015057 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2921 | Open in IMG/M |
3300006806|Ga0079220_10245660 | All Organisms → cellular organisms → Bacteria | 1067 | Open in IMG/M |
3300006806|Ga0079220_12054379 | Not Available | 511 | Open in IMG/M |
3300006852|Ga0075433_10027040 | All Organisms → cellular organisms → Bacteria | 4864 | Open in IMG/M |
3300006852|Ga0075433_10857721 | Not Available | 793 | Open in IMG/M |
3300006854|Ga0075425_100104292 | All Organisms → cellular organisms → Bacteria | 3227 | Open in IMG/M |
3300006854|Ga0075425_100610479 | Not Available | 1254 | Open in IMG/M |
3300006954|Ga0079219_10213725 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1108 | Open in IMG/M |
3300007076|Ga0075435_101215337 | Not Available | 659 | Open in IMG/M |
3300007255|Ga0099791_10040987 | All Organisms → cellular organisms → Bacteria | 2056 | Open in IMG/M |
3300009088|Ga0099830_10038927 | All Organisms → cellular organisms → Bacteria | 3279 | Open in IMG/M |
3300009162|Ga0075423_11281219 | Not Available | 783 | Open in IMG/M |
3300010159|Ga0099796_10341446 | Not Available | 644 | Open in IMG/M |
3300010400|Ga0134122_12836203 | Not Available | 538 | Open in IMG/M |
3300011120|Ga0150983_13450310 | Not Available | 877 | Open in IMG/M |
3300011120|Ga0150983_13976888 | Not Available | 539 | Open in IMG/M |
3300012096|Ga0137389_10305326 | All Organisms → cellular organisms → Bacteria | 1347 | Open in IMG/M |
3300012202|Ga0137363_10131932 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1942 | Open in IMG/M |
3300012355|Ga0137369_10032875 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4729 | Open in IMG/M |
3300012361|Ga0137360_10090556 | All Organisms → cellular organisms → Bacteria | 2318 | Open in IMG/M |
3300012362|Ga0137361_10056054 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3273 | Open in IMG/M |
3300012363|Ga0137390_10040800 | All Organisms → cellular organisms → Bacteria | 4475 | Open in IMG/M |
3300012683|Ga0137398_10136461 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1581 | Open in IMG/M |
3300012931|Ga0153915_10166006 | All Organisms → cellular organisms → Bacteria | 2403 | Open in IMG/M |
3300012931|Ga0153915_13072334 | Not Available | 543 | Open in IMG/M |
3300012986|Ga0164304_10543822 | Not Available | 857 | Open in IMG/M |
3300015371|Ga0132258_10987114 | All Organisms → cellular organisms → Bacteria | 2128 | Open in IMG/M |
3300015374|Ga0132255_101623550 | Not Available | 980 | Open in IMG/M |
3300017927|Ga0187824_10053134 | Not Available | 1252 | Open in IMG/M |
3300017930|Ga0187825_10009327 | All Organisms → cellular organisms → Bacteria | 3282 | Open in IMG/M |
3300017936|Ga0187821_10050967 | Not Available | 1485 | Open in IMG/M |
3300017936|Ga0187821_10077464 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1210 | Open in IMG/M |
3300017994|Ga0187822_10118875 | Not Available | 823 | Open in IMG/M |
3300019269|Ga0184644_1382203 | All Organisms → cellular organisms → Bacteria | 1093 | Open in IMG/M |
3300020021|Ga0193726_1299427 | Not Available | 624 | Open in IMG/M |
3300020062|Ga0193724_1011235 | All Organisms → cellular organisms → Bacteria | 1906 | Open in IMG/M |
3300020579|Ga0210407_10060181 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2843 | Open in IMG/M |
3300021086|Ga0179596_10015040 | All Organisms → cellular organisms → Bacteria | 2662 | Open in IMG/M |
3300021088|Ga0210404_10009692 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3921 | Open in IMG/M |
3300021432|Ga0210384_10963394 | Not Available | 754 | Open in IMG/M |
3300025910|Ga0207684_10013078 | All Organisms → cellular organisms → Bacteria | 7183 | Open in IMG/M |
3300025910|Ga0207684_10087496 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2654 | Open in IMG/M |
3300025910|Ga0207684_10715470 | Not Available | 850 | Open in IMG/M |
3300025910|Ga0207684_10719797 | Not Available | 847 | Open in IMG/M |
3300025922|Ga0207646_10076920 | All Organisms → cellular organisms → Bacteria | 2983 | Open in IMG/M |
3300025922|Ga0207646_10713473 | All Organisms → cellular organisms → Bacteria | 896 | Open in IMG/M |
3300025922|Ga0207646_11365280 | Not Available | 617 | Open in IMG/M |
3300026001|Ga0208000_100862 | All Organisms → cellular organisms → Bacteria | 1395 | Open in IMG/M |
3300026005|Ga0208285_1003076 | All Organisms → cellular organisms → Bacteria | 1053 | Open in IMG/M |
3300026285|Ga0209438_1126490 | Not Available | 699 | Open in IMG/M |
3300026359|Ga0257163_1037409 | Not Available | 767 | Open in IMG/M |
3300026482|Ga0257172_1089110 | Not Available | 567 | Open in IMG/M |
3300026496|Ga0257157_1006040 | All Organisms → cellular organisms → Bacteria | 1862 | Open in IMG/M |
3300026508|Ga0257161_1004363 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2415 | Open in IMG/M |
3300026514|Ga0257168_1021091 | All Organisms → cellular organisms → Bacteria | 1346 | Open in IMG/M |
3300026515|Ga0257158_1006038 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1718 | Open in IMG/M |
3300027645|Ga0209117_1038158 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 1470 | Open in IMG/M |
3300027651|Ga0209217_1018045 | All Organisms → cellular organisms → Bacteria | 2275 | Open in IMG/M |
3300027765|Ga0209073_10188594 | Not Available | 779 | Open in IMG/M |
3300027894|Ga0209068_10007659 | All Organisms → cellular organisms → Bacteria | 5091 | Open in IMG/M |
3300028047|Ga0209526_10069561 | All Organisms → cellular organisms → Bacteria | 2475 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10100296 | Not Available | 778 | Open in IMG/M |
3300031424|Ga0308179_1008795 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla | 946 | Open in IMG/M |
3300031716|Ga0310813_10089671 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2366 | Open in IMG/M |
3300031720|Ga0307469_10002576 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7347 | Open in IMG/M |
3300031820|Ga0307473_10016280 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2894 | Open in IMG/M |
3300031962|Ga0307479_11534521 | Not Available | 622 | Open in IMG/M |
3300032179|Ga0310889_10317337 | Not Available | 756 | Open in IMG/M |
3300032205|Ga0307472_100646862 | Not Available | 941 | Open in IMG/M |
3300033412|Ga0310810_10006926 | All Organisms → cellular organisms → Bacteria | 12865 | Open in IMG/M |
3300033432|Ga0326729_1004293 | All Organisms → cellular organisms → Bacteria | 2786 | Open in IMG/M |
3300033433|Ga0326726_10027601 | All Organisms → cellular organisms → Bacteria | 4941 | Open in IMG/M |
3300033433|Ga0326726_11503471 | Not Available | 655 | Open in IMG/M |
3300033500|Ga0326730_1012938 | All Organisms → cellular organisms → Bacteria | 1809 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 19.42% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 10.68% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 10.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 8.74% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 8.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.83% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.83% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.85% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.88% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.88% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 3.88% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.91% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.94% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.94% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.97% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.97% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.97% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.97% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300004117 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300004139 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005875 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 | Environmental | Open in IMG/M |
3300005876 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 | Environmental | Open in IMG/M |
3300005878 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 | Environmental | Open in IMG/M |
3300005879 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 | Environmental | Open in IMG/M |
3300005880 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201 | Environmental | Open in IMG/M |
3300005888 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 | Environmental | Open in IMG/M |
3300005890 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
3300019269 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
3300020062 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1 | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026001 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes) | Environmental | Open in IMG/M |
3300026005 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes) | Environmental | Open in IMG/M |
3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026359 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A | Environmental | Open in IMG/M |
3300026482 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B | Environmental | Open in IMG/M |
3300026496 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A | Environmental | Open in IMG/M |
3300026508 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A | Environmental | Open in IMG/M |
3300026514 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B | Environmental | Open in IMG/M |
3300026515 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A | Environmental | Open in IMG/M |
3300027645 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031424 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033432 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300033500 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGIcombinedJ26739_1002969474 | 3300002245 | Forest Soil | MWRRLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSWSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0058893_10011142 | 3300004117 | Forest Soil | MWRRLVAGGLLGLGLVSSARALDPQALVGDWVGEWNNALGGRDAVYMTVNRVRGDRVEGTVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0058897_100298782 | 3300004139 | Forest Soil | MWRRLVAGGLLGLGLVSSARALDPQALVGDWVGEWNNALGGRDAVYMTVRRVRGDRVEGTVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0058897_107775241 | 3300004139 | Forest Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0066680_101284781 | 3300005174 | Soil | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFMGTLVGSTLSVRAGVTVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0066679_102469082 | 3300005176 | Soil | MWRRLVAGGLLGLGLVSSARALDPQAFVGDWVGEWNNALGGRDAVYMTVSRVRGDRVEGIVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0070709_102899911 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRGLIAGGLLGLGLVSSARALDPQAIVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFLQAAGRSAVSLAKRSP* |
Ga0070694_1000349813 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | VRHAALAVLLGLASVSGVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTKVSGDRVEGTVYWRATPGTASENRDLLFVGTLVGSLLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0070708_1001034774 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0070708_1005367563 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0070708_1020990071 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | LTFPSMWRGLITGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVRRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVNRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0070706_1000463704 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRGLITGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVRRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRSGPTVPGSPAMSFSCSVNRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0070706_1013052641 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTRVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0070707_1003149131 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRVTPGTAADNRDLAFVGTLVGSTLSVRAGVTVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0070707_1016480741 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTRVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGF |
Ga0070707_1018011471 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | SARALEPQAIVGDWVGEWNNGLGARDAVYLTVIRVLGDRVEGTVFWRATPGTAADNRDLSFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQGTGRSAVSFAKKNP* |
Ga0070698_1001549041 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGVTVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0070698_1019172931 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0070695_1014110561 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFLQAAGRSAVSLAKRSP* |
Ga0075293_10239822 | 3300005875 | Rice Paddy Soil | VPGSSRPARGGRWRTGALAVLLGLGSVSVASALEPQAIVGVWVGEWNNGLGVSDAVYLTVSKVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTVPGSSTMSFSCSISRDGTRMDGLFQAASRAAVSFTKKQP* |
Ga0075300_10065861 | 3300005876 | Rice Paddy Soil | ALAVLLGLASVSGVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWQATPGTASENRDLRFVGTLVGSMLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0075300_10635192 | 3300005876 | Rice Paddy Soil | RRPEVPGSSRPARGGRWRTGALAVLLGLGSVSVASALEPQAIVGVWVGEWNNGLGVSDAVYRTVSKVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTAPGSPAMSFSCSISRDGTRMDGFFQAAGRSAVSFAKKQP* |
Ga0075297_10022982 | 3300005878 | Rice Paddy Soil | VLLGLGSVSVASALEPQAIVGVWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTAPGSPAMSFSCSISRDGTRMDGFFQAAGRSAVSFAKKQP* |
Ga0075297_10183231 | 3300005878 | Rice Paddy Soil | ASAPGAGAIEPQALVGAWIGEWNNGLGVSDAVYLTVTKVSGDRVEGTVYWRATPGTASENRDLLFVGTLVGSLLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0075295_10000225 | 3300005879 | Rice Paddy Soil | MSVRLAALALLLGLASVSGAGAIEPQALVGAWIGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWQATPGTASENRDLRFVGTLVGSMLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0075298_10221631 | 3300005880 | Rice Paddy Soil | LVVLLGLGSVSVASALEPQAIVGVWVGEWNNGLGVSDAVYLTVSKVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTVPGSSTMSFSCSISRDGTRTDGLFQAAGRAAVSFTKKQP* |
Ga0075289_10488422 | 3300005888 | Rice Paddy Soil | SVRLAALALLLGLASVSGAGAIEPQALVGAWIGEWNNGLGVSDAVYLTVTKVSGDRVEGTVYWRATPGTASENRDLLFVGTLVGSLLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0075285_10083911 | 3300005890 | Rice Paddy Soil | VTDLARRAWRTGALALLLGLASVSGAGAIEPQALVGAWIGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTASENRDLLFVGTLVGSLLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0075023_1000328854 | 3300006041 | Watersheds | MSGRRTWRGIVVAGLLGLGFVSSASALEPQALVGDWVGEWNNGLGIHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGAGRSAVSFAKKAP* |
Ga0075018_100150572 | 3300006172 | Watersheds | MSRRRTWRGIVVAGLLGLGFVSSASALEPQALVGDWVGEWNNGLGIHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGAGRSAVSFAKKAP* |
Ga0079220_102456601 | 3300006806 | Agricultural Soil | PCAPARGLARVVDLHAQLDLLRPGPRAGWRCGVLAVLVGLASVSGAPAFEPQALVGAWVGEWNNGLGVSKAVYLTVTKVSGERVEGTLYWQATPGTVAENQDLLFVGTLVGPTLSVRGAPTVPGSPAMSFSCSINRDGTRMDGFVQGAGRAAVSFARKDP* |
Ga0079220_120543792 | 3300006806 | Agricultural Soil | GLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLSGSTLSVRDGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0075433_100270405 | 3300006852 | Populus Rhizosphere | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLSGSTLSVRDGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0075433_108577212 | 3300006852 | Populus Rhizosphere | MWRRLVVGRLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVNRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0075425_1001042924 | 3300006854 | Populus Rhizosphere | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVWTLSGSTLSVRDGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0075425_1006104792 | 3300006854 | Populus Rhizosphere | MWRRLVVGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVNRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0079219_102137251 | 3300006954 | Agricultural Soil | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQVAGRSA |
Ga0075435_1012153371 | 3300007076 | Populus Rhizosphere | GGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVNRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP* |
Ga0099791_100409874 | 3300007255 | Vadose Zone Soil | MWRGVIVAGLLGLGVVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0099830_100389275 | 3300009088 | Vadose Zone Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0075423_112812191 | 3300009162 | Populus Rhizosphere | MWRRLVVGRLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVNRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSA |
Ga0099796_103414462 | 3300010159 | Vadose Zone Soil | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMDGFFQGTGRSAVSFAKKNP* |
Ga0134122_128362031 | 3300010400 | Terrestrial Soil | MWRRVVVAGLLGLGLVSSARAVEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTG |
Ga0150983_134503101 | 3300011120 | Forest Soil | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVS |
Ga0150983_139768881 | 3300011120 | Forest Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGARDAVYLTVIRVLGDRVEGTVFWRATPGTAADNRDLSFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGARMEGFFQGTGRSAVSFAKKNP* |
Ga0137389_103053263 | 3300012096 | Vadose Zone Soil | MWRRVIVAGLLGLGVVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0137363_101319323 | 3300012202 | Vadose Zone Soil | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFF |
Ga0137369_100328753 | 3300012355 | Vadose Zone Soil | LVLWSVSIVGALEPHAIVGDWVGEWNNGRGASDAVYMTVTTVAGDRVEGTLYWRATPGAPSENRDLQFVGTLVGNTLSVRGAPTVPGSQAMSFSYNITRDGTRMAGFFQASDRSSVSFTKKQ* |
Ga0137360_100905563 | 3300012361 | Vadose Zone Soil | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLSFVGTLVGSTLSVRAGVTVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0137361_100560544 | 3300012362 | Vadose Zone Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSGSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0137390_100408004 | 3300012363 | Vadose Zone Soil | MWRGVIVAGLLGLGVVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPVMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP* |
Ga0137398_101364611 | 3300012683 | Vadose Zone Soil | MWRGVIVAGLLGLGVVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0153915_101660064 | 3300012931 | Freshwater Wetlands | VSVVDAIEPQALMGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGIVYWQATPGAPSENRDLSFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP* |
Ga0153915_130723342 | 3300012931 | Freshwater Wetlands | LAPVSAASAIEPQALVGAWVGEWNNGLGVSDAVYMTVTKVSGDRVEGTVYWQATPGTPSENRDLSFVGTLVGSTLSVRGAPTVPGSPAMSFSCSVSRDGTRMDGFFQASGRSAVSFARKGP* |
Ga0164304_105438221 | 3300012986 | Soil | MWRRVVVAGLLGLGLVSSARAVEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP* |
Ga0132258_109871143 | 3300015371 | Arabidopsis Rhizosphere | VLLGLGSVSGVGAIEPQALVGAWVGEWNNGLGASDAVYLTVTRVSGDRVEGTVYWQATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAARSAVSFARK* |
Ga0132255_1016235501 | 3300015374 | Arabidopsis Rhizosphere | EPQALVGAWVGEWNNGLGASDAGYLTVTRVSGDRVEGTVYWQATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPTMSFSCSISRDGTRMDGFFQGAARSAVSFARK* |
Ga0187824_100531341 | 3300017927 | Freshwater Sediment | RWRVGVLAALLGLASASSVAAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENRDLLFVGTLVGSTLSVRGAPTIPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0187825_100093274 | 3300017930 | Freshwater Sediment | VTDPTRRRWRVGVLAALLGLASASSVAAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENRDLLFVGTLVGSTLSVRGAPTIPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0187821_100509674 | 3300017936 | Freshwater Sediment | VLAALLGLASAPGVAAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENRDLLFVGTLVGSTLSVRGAPTIPGSPAMSFSCSVSRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0187821_100774641 | 3300017936 | Freshwater Sediment | VTDPTRRRWRVGVLAALLGLASAPGVAAIEPQALVGAWVGEWNNGLGVSDVVYLTVTRVSGDRVEGTVYWQATPGAPSENRDILFVGTLVGSTLSVRGAPTIPGSPAMSFSCSISRDGERMDGFFQGAGRSAVSFARKQP |
Ga0187822_101188752 | 3300017994 | Freshwater Sediment | VTDPTRRRWRVGVLAALLGLASAPGVAAIEPQALVGAWVGEWNNGLGVSDVVYLTVTRVSGDRVEGTVYWQATPGAPSENRDILFVGTLVGSTLSVRGAPTIPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0184644_13822032 | 3300019269 | Groundwater Sediment | MWRRVVVGGLLGLGLVSSARALEPQALVGDWVGEWNNGLGVHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKHP |
Ga0193726_12994271 | 3300020021 | Soil | MWRRVIVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTG |
Ga0193724_10112351 | 3300020062 | Soil | RALEPQAIVGDWVGEWNNGLGVRDAVYMTVTRVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGIGRSAVSFARKHP |
Ga0210407_100601814 | 3300020579 | Soil | MWRRLVAGGLLGLGLVSSARALDPQALVGDWVGEWNNALGGRDAVYMTVRRVRGDRVEGTVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0179596_100150404 | 3300021086 | Vadose Zone Soil | MWRRVIVAGLLGLGVVSSARALEPQAIVGEWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP |
Ga0210404_100096925 | 3300021088 | Soil | MWRRLVAGGLLGLGLVSSARALDPQALVGDWVGEWNNALGGRDAVYMTVSRVRGDRVEGTVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0210384_109633942 | 3300021432 | Soil | MWRRLVAGGLLGLGLVSSARALDPQALVGDWVGEWNNALGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGATVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0207684_100130785 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP |
Ga0207684_100874962 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRGLITGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVRRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRSGPTVPGSPAMSFSCSVNRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0207684_107154702 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTRVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0207684_107197972 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0207646_100769203 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVIVAALLGLGAVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRVTPGTAADNRDLAFVGTLVGSTLSVRAGVTVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP |
Ga0207646_107134731 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGARDAVYLTVIRVLGDRVEGTVFWRATPGTAADNRDLSFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQGTGRSAVSFAKKNP |
Ga0207646_113652801 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQ |
Ga0208000_1008623 | 3300026001 | Rice Paddy Soil | VRHVALAVLLGLASVSGAGAIEPQVLVGAWIGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTAPGSPAMSFSCSISRDGTRMDGFFQAAGRSAVSFAKKQP |
Ga0208285_10030761 | 3300026005 | Rice Paddy Soil | QAIVGVWVGEWNNGLGVSDAVYLTVSKVSGDRVEGTVYWRATPGTPSENHDVLFVGTLVGSTLSVRGAPTALGSPAMSFSCSISRDGTRMDGFFQAAGRSAVSFAKKQP |
Ga0209438_11264902 | 3300026285 | Grasslands Soil | ALEPQAIVGDWVGEWNNGLGARDAVYLTVIRVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0257163_10374091 | 3300026359 | Soil | MWRRVIVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0257172_10891101 | 3300026482 | Soil | MWRGVIVAGLLGLGVVSSARALEPQAIVGDWVGEWNNGLGVRDAVYLTVTQVRGDRVEGTVYWRATPGTAADNRDLAFVGTLVGSTLSVRAGATVPGSPAMSFSCSVSRDGTRMDGFFQAAGRSAVSFAKKTP |
Ga0257157_10060404 | 3300026496 | Soil | MWRRVVVAGLLGLGMVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKNP |
Ga0257161_10043631 | 3300026508 | Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKNP |
Ga0257168_10210913 | 3300026514 | Soil | MWRRVVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFAKKNP |
Ga0257158_10060382 | 3300026515 | Soil | MWRRVIVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVHDAVYMTVTKVLGDRVEGTVHWKATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKNP |
Ga0209117_10381582 | 3300027645 | Forest Soil | MWRRIVVAGLLGLGLVSSARALEPQAIVGDWVGEWNNGLGVHDAVYMTVTKVLGDRVEGTVYWKATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKNP |
Ga0209217_10180453 | 3300027651 | Forest Soil | MWRRLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSWSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0209073_101885942 | 3300027765 | Agricultural Soil | PPDRPPCAPARGLARVVDLHAQLDLLRPGPRAGWRCGVLAVLVGLASVSGAPAFEPQALVGAWVGEWNNGLGVSKAVYLTVTKVSGERVEGTLYWQATPGTVAENQDLLFVGTLVGPTLSVRGAPTVPGSPAMSFSCSINRDGTRMDGFVQGAGRAAVSFARKDP |
Ga0209068_100076593 | 3300027894 | Watersheds | MSGRRTWRGIVVAGLLGLGFVSSASALEPQALVGDWVGEWNNGLGIHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGAGRSAVSFAKKAP |
Ga0209526_100695613 | 3300028047 | Forest Soil | MWRRVVVAGLLGLGLVSSARAVEPQAIVGDWVGEWNNGLGVRDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFVGTLVGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKHP |
(restricted) Ga0255310_101002962 | 3300031197 | Sandy Soil | PARPSWRSGALAALLALASVSSVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWRATPGTPSENRDVLFVGTLVGSTLSVRGAPTIPGSPAMSFSCSVSRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0308179_10087952 | 3300031424 | Soil | MWRRVVVGGLLGLGLVSSARALEPQALVGDWVGEWNNGLGVHDAVYMTVTKVLGDRVEGTVYWQATPGTASDNRDLVFEGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGARMDGFFQGTGRSAVSFARKHP |
Ga0310813_100896714 | 3300031716 | Soil | MPRRWRIGVLAALLGLAMVSGVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWQATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDG |
Ga0307469_100025761 | 3300031720 | Hardwood Forest Soil | MWRGLIAGGLLGLGLVSSARALDPQAIVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFF |
Ga0307473_100162804 | 3300031820 | Hardwood Forest Soil | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0307479_115345211 | 3300031962 | Hardwood Forest Soil | RLLTFPSMWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDTPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPAMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0310889_103173372 | 3300032179 | Soil | VTDPTRRAWRIGTLAVLLGLASVSGVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTKVSGDRVEGTVYWRATPGTASENRDLLFVGTLVGSLLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0307472_1006468622 | 3300032205 | Hardwood Forest Soil | MWRGLIAGGLLGLGLVSSARALDPQALVGDWVGEWNNGLGGRDAVYMTVSRVRGDRVEGTVYRQDAPGAPSDNRDLGFVGTLIGSTLSVRGGPTVPGSPTMSFSCSVSRDGTRMEGFFQAAGRSAVSLAKRSP |
Ga0310810_1000692611 | 3300033412 | Soil | MPRRWRIGVLAALLGLAMVSGVGAIEPQALVGAWVGEWNNGLGVSDAVYLTVTRVSGDRVEGTVYWQATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQL |
Ga0326729_10042934 | 3300033432 | Peat Soil | VTDPTRPWWRSGALAALLALASVSSVGAIEPQALVGAWVGEWNNGLGVSDAVDLTVTRVSGDRVEGIVYWHATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0326726_100276016 | 3300033433 | Peat Soil | VVLAVLLGLAPVSAASAIEPQALVGAWVGEWNNGLGVSDAVYMTVTKVSGDRVEGTVYWQATPGTPSENRDLSFVGTLVGSTLSVRGAPTVPGSPAMSFSCSVSRDGTRMDGFFQASGRSAVSFARKGP |
Ga0326726_115034712 | 3300033433 | Peat Soil | WRSGALAALLALASVSSVGAIEPQALVGAWVGEWNNGLGVSDAVDLTVTRVSGDRVEGIVYWHATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
Ga0326730_10129383 | 3300033500 | Peat Soil | VTDRTRPWWRSGALAALLALASVSSVGAIEPQALVGAWVGEWNNGLGVSDAVDLTVTRVSGDRVEGIVYWHATPGTPSENRDLLFVGTLVGSTLSVRGAPTVPGSPAMSFSCSISRDGTRMDGFFQGAGRSAVSFARKQP |
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