NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099796

Metagenome / Metatranscriptome Family F099796

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099796
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 149 residues
Representative Sequence VNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRIATRRGVVRSLRVELRTSAPLGVFVRTRA
Number of Associated Samples 89
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 43.69 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 100.00 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (74.757 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(11.650 % of family members)
Environment Ontology (ENVO) Unclassified
(29.126 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.777 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 27.38%    β-sheet: 32.74%    Coil/Unstructured: 39.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07726AAA_3 19.42
PF01882DUF58 0.97
PF01734Patatin 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1721Uncharacterized conserved protein, DUF58 family, contains vWF domainFunction unknown [S] 0.97
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 0.97
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 0.97
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.76 %
All OrganismsrootAll Organisms25.24 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004156|Ga0062589_102155877Not Available569Open in IMG/M
3300004157|Ga0062590_101390088Not Available697Open in IMG/M
3300004157|Ga0062590_101972762Not Available604Open in IMG/M
3300004157|Ga0062590_102710100Not Available528Open in IMG/M
3300004463|Ga0063356_101146253Not Available1124Open in IMG/M
3300004463|Ga0063356_104650649Not Available590Open in IMG/M
3300004479|Ga0062595_100506981Not Available908Open in IMG/M
3300004479|Ga0062595_101303413Not Available654Open in IMG/M
3300004479|Ga0062595_102426345Not Available521Open in IMG/M
3300004480|Ga0062592_101614840Not Available627Open in IMG/M
3300004480|Ga0062592_102415130Not Available527Open in IMG/M
3300004480|Ga0062592_102551712Not Available515Open in IMG/M
3300004643|Ga0062591_100823786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium859Open in IMG/M
3300005093|Ga0062594_100554347Not Available992Open in IMG/M
3300005330|Ga0070690_100848906Not Available711Open in IMG/M
3300005338|Ga0068868_102126586Not Available534Open in IMG/M
3300005341|Ga0070691_11011857Not Available519Open in IMG/M
3300005354|Ga0070675_101653107Not Available591Open in IMG/M
3300005355|Ga0070671_101774468Not Available548Open in IMG/M
3300005356|Ga0070674_101890538Not Available542Open in IMG/M
3300005367|Ga0070667_101401060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis656Open in IMG/M
3300005451|Ga0066681_10526350All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005454|Ga0066687_10486956Not Available727Open in IMG/M
3300005458|Ga0070681_11357782Not Available634Open in IMG/M
3300005458|Ga0070681_11791584Not Available541Open in IMG/M
3300005537|Ga0070730_10770700Not Available607Open in IMG/M
3300005544|Ga0070686_101724000Not Available532Open in IMG/M
3300005561|Ga0066699_10883835Not Available624Open in IMG/M
3300005576|Ga0066708_10500413Not Available783Open in IMG/M
3300005615|Ga0070702_100604812Not Available822Open in IMG/M
3300005617|Ga0068859_102556269Not Available562Open in IMG/M
3300005618|Ga0068864_102662716Not Available506Open in IMG/M
3300005719|Ga0068861_101364070Not Available691Open in IMG/M
3300005764|Ga0066903_102996576Not Available915Open in IMG/M
3300005840|Ga0068870_10856864Not Available639Open in IMG/M
3300005842|Ga0068858_100380318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1355Open in IMG/M
3300006052|Ga0075029_101114693All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300006057|Ga0075026_100712158Not Available601Open in IMG/M
3300006059|Ga0075017_101428671Not Available544Open in IMG/M
3300006102|Ga0075015_100162562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1169Open in IMG/M
3300006172|Ga0075018_10520285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207623Open in IMG/M
3300006354|Ga0075021_10414288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia846Open in IMG/M
3300006354|Ga0075021_10849228Not Available591Open in IMG/M
3300006806|Ga0079220_11512473Not Available576Open in IMG/M
3300006844|Ga0075428_102273520Not Available558Open in IMG/M
3300006852|Ga0075433_11601500Not Available562Open in IMG/M
3300006854|Ga0075425_100662309All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300009098|Ga0105245_11065024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia854Open in IMG/M
3300009098|Ga0105245_11094222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia843Open in IMG/M
3300009137|Ga0066709_100504784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1704Open in IMG/M
3300009148|Ga0105243_10355385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1347Open in IMG/M
3300009148|Ga0105243_12923001Not Available518Open in IMG/M
3300009553|Ga0105249_11156532Not Available844Open in IMG/M
3300009824|Ga0116219_10312602Not Available884Open in IMG/M
3300010397|Ga0134124_11150543Not Available794Open in IMG/M
3300010880|Ga0126350_12015068Not Available779Open in IMG/M
3300011119|Ga0105246_11191902Not Available700Open in IMG/M
3300012200|Ga0137382_10442951Not Available919Open in IMG/M
3300012208|Ga0137376_10877235Not Available771Open in IMG/M
3300012356|Ga0137371_10735104Not Available754Open in IMG/M
3300012958|Ga0164299_11507480Not Available525Open in IMG/M
3300012984|Ga0164309_11340231Not Available607Open in IMG/M
3300012984|Ga0164309_11772349Not Available530Open in IMG/M
3300013297|Ga0157378_10848291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia942Open in IMG/M
3300014325|Ga0163163_10463292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1328Open in IMG/M
3300014325|Ga0163163_11087355Not Available863Open in IMG/M
3300015063|Ga0167649_119618Not Available544Open in IMG/M
3300017973|Ga0187780_10337054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1064Open in IMG/M
3300017974|Ga0187777_10234673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1242Open in IMG/M
3300017999|Ga0187767_10329682Not Available530Open in IMG/M
3300018469|Ga0190270_12778887Not Available552Open in IMG/M
3300021432|Ga0210384_10432152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1186Open in IMG/M
3300021559|Ga0210409_11211846Not Available630Open in IMG/M
3300023066|Ga0247793_1080051Not Available555Open in IMG/M
3300025927|Ga0207687_10532458Not Available984Open in IMG/M
3300025935|Ga0207709_10409888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1038Open in IMG/M
3300025937|Ga0207669_11515158Not Available572Open in IMG/M
3300026023|Ga0207677_10172172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1694Open in IMG/M
3300026035|Ga0207703_10830940Not Available883Open in IMG/M
3300026088|Ga0207641_10753052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria962Open in IMG/M
3300027765|Ga0209073_10519907Not Available504Open in IMG/M
3300027869|Ga0209579_10112324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1446Open in IMG/M
3300027894|Ga0209068_10090253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1605Open in IMG/M
3300027907|Ga0207428_10487308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia896Open in IMG/M
3300028800|Ga0265338_10587060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium777Open in IMG/M
3300028869|Ga0302263_10218832Not Available758Open in IMG/M
3300029984|Ga0311332_10588245Not Available879Open in IMG/M
3300029987|Ga0311334_11128165Not Available656Open in IMG/M
3300029990|Ga0311336_11389582Not Available616Open in IMG/M
3300030294|Ga0311349_11697103Not Available584Open in IMG/M
3300031232|Ga0302323_100919065Not Available968Open in IMG/M
3300031232|Ga0302323_102283071Not Available616Open in IMG/M
3300031240|Ga0265320_10376312Not Available627Open in IMG/M
3300031247|Ga0265340_10286158Not Available732Open in IMG/M
3300031711|Ga0265314_10353124Not Available808Open in IMG/M
3300031847|Ga0310907_10794821Not Available529Open in IMG/M
3300031858|Ga0310892_10320123Not Available985Open in IMG/M
3300031902|Ga0302322_103280519Not Available555Open in IMG/M
3300031918|Ga0311367_10849054Not Available922Open in IMG/M
3300032013|Ga0310906_10394994Not Available912Open in IMG/M
3300032179|Ga0310889_10369933Not Available706Open in IMG/M
3300032828|Ga0335080_11446439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia682Open in IMG/M
3300034281|Ga0370481_0396275Not Available509Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil11.65%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen8.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere3.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.94%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.97%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.97%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015063Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028869Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4EnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10215587713300004156SoilLNGPGELTLTSIVLFTLGAYGVASGAASGQQSVVAVGVFAFTLFVIGIVGPIVSLARLEVDAWAPPDATVGERHDVHVRLRGRAARVEMRVVDPPGEWWCTASPATGIVPRVAARR
Ga0062590_10139008813300004157SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVVAPRPAPQSATVAAVTAALRERTIDSVASASPSSPG
Ga0062590_10197276223300004157SoilVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALP
Ga0062590_10271010023300004157SoilLNGPGELTLTSIVLFTLGAYGVASGAASGQQSVVAVGVFAFTLFVIGIVAPIVSLARLEVDAWAPPDATVGERHDVHVRLRGRAARVEMRVVDPPGEWWCTASPATGIVPRVAA
Ga0063356_10114625313300004463Arabidopsis Thaliana RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVALSRIRVDAWASPDAMVGASHDVRVRLHGRAARVEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVRSRFVRVMLPVPLMVAPRPTRAAPRLRPRP
Ga0063356_10465064923300004463Arabidopsis Thaliana RhizosphereLNGPGELTLTSIVLFTLGAYGVAAGAASGQQSVVAVGVFAFTLFVIGIVGPIVSLARLEVDAWAPPDATVGERHDVHVRLRGFAARVELRVVDPPGEWWCTASPAAG
Ga0062595_10050698123300004479SoilVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVNVRLSGRTARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFHTI
Ga0062595_10130341313300004479SoilVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVLGIIAPIVSLARLQVDAWASSDAMVGANHDVHVRLYGRAARVEVRVVDPPGEWWRTASPAEGVIPRVAARRGVFHSIRVELRSSAPLGVFVRSRFLRVTLPVPLTVAPRPTLA
Ga0062595_10242634513300004479SoilVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVVGIVAPIVSLARLQVDAWASSDATVGASHDVHVRLYGRTARVEVRVVDPPGEWWRTASPAEGVIPRVAARR
Ga0062592_10161484023300004480SoilLNGPGELTLTSIVLFTLGAYGVAAGAASGQQSVVAVGVFAFTLFVIGIVGPIVSLARLEVDAWAPPDATVGERHDVHVRLRGRAARVEMRVVDPPGEWWCTASPATGIVP
Ga0062592_10241513013300004480SoilRGPRHDLVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVVAPRPAPQSATVAAVTAA
Ga0062592_10255171213300004480SoilRSAAGERVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVALSRIRVDAWASPDAMVGASHDVRVRLHGRAARVEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVRSRFVRVMLPVPLMVAPRPTRAAPRLRP
Ga0062591_10082378613300004643SoilVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVALSRIRVDAWASPDAMVGASHDVRVRLHGRAARVEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVRSRFVRVMLPVPLMVAPRPTRAAPRLRPRPDDAALSSASSSAYGPGDTVRAVRPYVPGDAARLVHWAT
Ga0062594_10055434713300005093SoilVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSS
Ga0070690_10084890623300005330Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFHTIRI
Ga0068868_10212658623300005338Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVLGIIAPIVSLARLQVDAWASSDAMVGANHDVHVRLHGRAARVEVRVVDPPGEWWRTASPAEGVIPRVAARRGVFHSIRVE
Ga0070691_1101185713300005341Corn, Switchgrass And Miscanthus RhizosphereGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLARIHVDAWASSDAMVGASHDVHVRLSGRTARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFPTVRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPRLRPRPDDAAMSSAST
Ga0070675_10165310713300005354Miscanthus RhizospherePGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRMYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVVAPRPAPQSATVAAVTAALRERTIDSVASASPSSPGGGDTVRAVRPYVP
Ga0070671_10177446813300005355Switchgrass RhizosphereSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVALSRIRVDAWASPDAMVGASHDVRVRLHGSTARLEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVRSRFVRVTLPVPLMVAPRPTRAAPRLRPRPDDAALSSASSSAYGPGDTVRAVRPYV
Ga0070674_10189053823300005356Miscanthus RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATG
Ga0070667_10140106013300005367Switchgrass RhizosphereGRLAAPVSEHWVDVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPRLRPRPEDAAMSSLSTSVHGPGDTVRAVRPYVPGDAARLVHWPTS
Ga0066681_1052635023300005451SoilVSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVVLARVEVDAWTQTDVTVGERYKVHVRLYGRASRVEVRLLDPPADWWRTAVPAAGEIPRVATRRGVSRSLR
Ga0066687_1048695613300005454SoilMNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVVGIVAPIVALARLQVDAWASSDATVGASHDVHVRLYGRTARVEVRVVDPPGEWWRTASPAEGLIPRIAARRGVFRSVRIELRSSAPLGVFVRSRFVRVTLPVPLTVAPRPTLAAPRLRPRRDDAALSTASTSVHGPGDTVRAVRPYV
Ga0070681_1135778223300005458Corn RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFLLGIVIPVVSLARLDVEAWASPDAMVGARHDVHLRLHGRAARVEVRVVDPPGEWWRTAAPADGV
Ga0070681_1179158413300005458Corn RhizosphereVTGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFVIGIVWPIVALSRVDLEAWTRTDVTVDERYEVNIRLRGRCPRVEVRFADRPADAWVTASPADGVLTRVAS
Ga0070730_1077070023300005537Surface SoilVSGPGELTLTSIVLFTLGAYGIAAGAAAGEQSVVAVGVFAFALFIVGIVWPIVSVSRIDLDAWTRTDVAVGERYTVHLRLYGRAARVEVRLLDPSGDWWVTASPGAGEIERVASRRGVFPSLRIEVRSSAPLGVFVRTRAIRVELPYELVVAPRAALTGPRPGAVARPLRERPQD
Ga0070686_10172400013300005544Switchgrass RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYH
Ga0066699_1088383513300005561SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALARVEVDAWTQTDATVGERYNVHVRLRGRASRVEVRLLDPPGDWWRTASPAAGEIQRIATRRGVSRSLRVELRTSAPLGVFVRTRAVRVDLRFELVVAP
Ga0066708_1050041313300005576SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALARVDVDAWTQTDATVGERYNVHVRLRGRASRVEVRLLDPPGEWWRTASPAAGEIQRVATRRGVSRSLRV
Ga0070702_10060481213300005615Corn, Switchgrass And Miscanthus RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRMYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVR
Ga0068859_10255626913300005617Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVIPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPIP
Ga0068864_10266271613300005618Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVLGIIIPIVSLSRLDVEAWAAPDAMVGARHDVHVRLHGRAARVEMRVVDPFGEWWRTAAPADGVIPRV
Ga0068861_10136407023300005719Switchgrass RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVVAPRPAPQSATVAAVTAALRERTIDSVASASPSSPGGGDTVR
Ga0066903_10299657613300005764Tropical Forest SoilVNGPGELTLTSIVLFTLGAYGIAAGAAAGEQSVVAVGVFAFALFVIGIVWPIASLARIDVDAWTRTDVTVGERYTVHTRLRGRAARVELRLLDPPGDWWVTASPSSGDIERVANRRGVFHSLRIELRSSAPLGVFVRTR
Ga0068870_1085686413300005840Miscanthus RhizosphereLARRRRDRRRGRLAAPVSGHRVDVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPRLRPRPEDAAMSSLSTSVHGPGDTVRAVRP
Ga0068858_10038031823300005842Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVLGIIIPIVSLSRLDVEAWAAPDAMVGARHDVHVRLHGRAARVEMRVVDPPGEWWRTAAPA
Ga0075029_10111469313300006052WatershedsVNGPGELTLTSIVLFTLGAYGVAAGAASGEQAVVAVGVFAFALFVIGIIWPIVALSGIAVEAWTPADAIVGEHYDVHVTLHGRVARVELRVLDPPGRWWVTAAPASGVI
Ga0075026_10071215823300006057WatershedsVNGPGELTLTSIVLFTLGAYGVAAGAASGQQSVVAVGVFAFALFVIGIVWPIFSLSRIAVEAWAPADATVGESHDVHLRLIGRVARVEVRLIDPPGQWWITASPAVGVMPRIAS
Ga0075017_10142867123300006059WatershedsLNGPGELTLTSIVLFTLGAYGIAAGAATGEESVVAVGVFAFVLFVVGIIWPIVALSGVEVAAWTPADATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFNRIRVELRTSAPLG
Ga0075015_10016256223300006102WatershedsMSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVAIEAWAPADATVGESHDVHVRLRGRVARVELRLLDPAGPWWVTASPADGVIPRVASRRGVYSSLRIEMRTSAPLGVFVRTRVVRVELR
Ga0075018_1052028513300006172WatershedsARRDAAAPPGSPMSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVAIEAWAPADATVGESHDVHVRLHGRVARVELRLLDPAGPWWVTASPADGVIPRVASRRGVYSSLRIEMRTSAPLGVFVRTRVVRVELRTEIAVAPRPVGSDAFSGATAPRLHELPQDGVLSATHNAGPGDSVRAVRP
Ga0075021_1041428813300006354WatershedsMSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVAIEAWAPADATVGESHDVHVRLRGRVARVELRLLDPAGPWWVTASPADGVIPRVASRRGVYSSLRIEMR
Ga0075021_1084922813300006354WatershedsSLNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALSGVEVAAWTPADATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFNRIRIELRTSAPLGVFVRTRVLRVELPVELAVAPRPTNEAPRLYERPHDGLTSATAVNGHRVGDTVRSVRPYVPGDP
Ga0079220_1151247313300006806Agricultural SoilMNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFVIGIVWPIVALSRVELEAWTRTDVTVDEPYEVNVRLRGRCARVEVRFADLPGDAWVTASPASGVVPRVASRRGVYS
Ga0075428_10227352013300006844Populus RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVALSRIRVDAWASPDAMVGASHDVRVRLHGRAARVEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVRSRFVRVMLPVPLMVAPRPTRAAPRLRPRPDDAA
Ga0075433_1160150023300006852Populus RhizosphereMNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVVLARVEVDAWAQTDVTVGESYTVHVRLYGRASRVEVRLLDPPGDWWRTAVPAAGTIRRVATRRGVSRSLRVELRTSAPLGVFVRTRAVRVEQ
Ga0075425_10066230913300006854Populus RhizosphereMNGPGELTLTSIVLFTLGAYGIAAGAASGQQSVVAVGVFAFALFLIGIIWPIVVLARVEVDAWAQTDVTVGESYTVHVRLYGRASRVEVRLLDPPGDWWRTAVPAAGTIRRVATRRGVSRSLRVELRTSAPLGVFVRTRAVRVEQRFELVVAPSPITAAARPDPVARRVRERPNEGPVAVSTVAARGGGDTVRAVRPYVSGDA
Ga0105245_1106502423300009098Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRIDAWASSDAMVGASHDVKVRLSGRVARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVF
Ga0105245_1109422223300009098Miscanthus RhizosphereVVAVGVFAFALFVIGIVWPIVAMSRIELEAWTRTDVTVDEPYEVNVRLHGHGSRVEVRFADVPGDAWVTASPADGVLPRVANRRGVYNLLRFELRSSAPLGVFVRSRVVRAALPFELVVAPRPTPTSVATSAVAFPLRERPLDLSV
Ga0066709_10050478433300009137Grasslands SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLTGIIWPIVVLARVEVDAWTQTDVTVGERYKVHVRLYGRASRVEVRLLDPPADWWRTAVPAAGEIPRVATRRGVSRSLRVELRTSAPLGVFVRTRAVRVEQRFELVVAPSPI
Ga0105243_1035538513300009148Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRI
Ga0105243_1292300113300009148Miscanthus RhizosphereIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRVARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVELPVPLTVAPRPTLAAPRLRPRPEDAALSSLSTSVHGPGD
Ga0105249_1115653213300009553Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLARIHVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVELPVPLTVAPRPTLAAPRLRPRPEDA
Ga0116219_1031260213300009824Peatlands SoilLNGPGELTLTSIVLFTLGAYGIAAGAASGEQGVVAVGIFAFVLFVLGIVWPIVVLSRIDVEAWTPADATVGETSEVHVRLHGRAVRVELRLLDPPGSWWVTASPADGVIPRLAVRRGVFSSVRIELRTSAPLGVFVRSRVMRVQLPTEQAVAP
Ga0134124_1115054313300010397Terrestrial SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRIATRRGVVRSLRVELRTSAPLGVFVRTRA
Ga0126350_1201506823300010880Boreal Forest SoilVSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVEIDAWAPADATVGEHHDVHVRLRGRVARVELRLLDPVGPWWVTASPTDGVIPRLAARRGVYSSLRIEMRTSAPLGVFVRTRVVRAQLPHDLVVAPRPVGGEAFASAMAPRLHELPQDGVLSAAPNA
Ga0105246_1119190213300011119Miscanthus RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVF
Ga0137382_1044295123300012200Vadose Zone SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALARVDVDAWTQTDATVGERYNVHVRLRGRASRVEVRLLDPPGEWWRTASPAAGEIQR
Ga0137376_1087723523300012208Vadose Zone SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALARVDVDAWTQTDATVGERYNVHVRLRGRASRVEVRLLDPPGEWWRTASPAAGEIQRIATRRGVSRSLRVELRTSAPLGVFVRTRAVRVEQRFELVVAPSPITAAARPDPVARRVRE
Ga0137371_1073510423300012356Vadose Zone SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVVLARVEVDAWTQTDVTVGERYKVHVRLYGRASRVEVRLLDPPADWWRTAVPAAGEIPRVATRRGVCRSLRVELRTSAPLGVFVRTRAVRVEQRFELVVAPSPITAAARPDPVARRVRERPNEGPVAVSAVAARGGGDTVRAVRPYVS
Ga0164299_1150748013300012958SoilLAAPVSDHRVDVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIIAPIVSLSRIRVDAWASSDAMVGASHDVNVRLSGRTARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPRLRP
Ga0164309_1134023123300012984SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFVIGIVWPIVAMSRIELEAWTRTDVTVDEPYEVNVRLHGHGSRVEVRFADVPGDAWVTASPADGVLPRVASRRGVYNLLRFELRSSAPLGVFVRSRVVRAALPFDLVVAPRPTPTSVATSAVAFPLRE
Ga0164309_1177234913300012984SoilRRGRLAAPVSDHRVDVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIIAPIVSLSRIRVDAWASSDAMVGASHDVNVRLSGRTARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPR
Ga0157378_1084829123300013297Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRIATRRGVVRSLRVELRTSAPLGVFVRTRAVRVDLRFELVVAPSPVAAGA
Ga0163163_1046329213300014325Switchgrass RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPY
Ga0163163_1108735533300014325Switchgrass RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVLGIIIPIVSLSRLDVEAWAAPDAMVGARHDVHVRLHGRAARVEMRVVDPPGQWWRTAAPADGVIPRVAARRGVFHTIRVELRSSAPLGVFVRSRFVRVELAAPLTVAPRPTRAAPRLWPRPDDAALSSAS
Ga0167649_11961823300015063Glacier Forefield SoilLNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALSGVEVAAWTPADATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFDRIRIELRTSAPLGVFV
Ga0187780_1033705413300017973Tropical PeatlandVSGPGELTLTSIVLFTLGAYGIASGAASGEQGVVAIGVFAFALFVVGIVWPIVMLSGVTVEAWAPADVMVGERHDVHLRLHGRVARVELRLLDPPGQWWMTASPANGLVPRVA
Ga0187777_1023467313300017974Tropical PeatlandVSGPGELTLTSIVLFTLGAYGIASGAASGEQGVVAIGVFAFALFVVGIVWPIVMLSGVGVEAWAPADVTVGERHDVHLRLHGRVARVELRLLDPPGQWWMTASPA
Ga0187767_1032968213300017999Tropical PeatlandTLTSIVLFTLGAYGIAAGAASGEQSVVAVGIFAFALFVIGIVWPIVALSRLDLEAWTRSDATVGERHTVHIRLRGRAARVEVRALDPPGEWYVTASPSTGEIERIATRRGVFRSLRLELRSSAPLGVFVRTRVVRVDLRHELVVAPRPALTGPRPGAVARPLRERPQDAPVAAAAV
Ga0190270_1277888713300018469SoilVNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFTLFVIGIVAPIVSLSRIRVDAWASPDAMVGASHDVRVRLHGRTARVEVRVVDPPGDWWRTAAPAEGVVPRVAARRGVFHTIRIELRSSAPLGVFVR
Ga0210384_1043215213300021432SoilLNGPGELTLTSIVLFTLGAYGIAAGAASGEQGVVAVGVFAFALFVLGIIWPIVVLSRVEIEAWAPADATVGETGEVHVRLHGRAARVELRLLDPTGPWWVTASPANGVIPRRALRRGVFSNVRIE
Ga0210409_1121184613300021559SoilLNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALSGVEVDAWAPADAIVGESNDLHVRLYGRAPRVEIRVLDPPGQWWVTAAPADGVIPHLANRRGVFRSVRIELRTSAPLGVFVRSRI
Ga0247793_108005123300023066SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVL
Ga0207687_1053245823300025927Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRIATRRGVVRSLRVELRTSAPLGVFVRTRAVRVDLRFELVVAPSPVAAGARSDPAARRTRERPNEGPVAVST
Ga0207709_1040988823300025935Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFLIGIIWPIVALSRVDVDAWTPTDATVGERYDVHVRLGGRASRVEVRLLDPPGDWWRTASPATGEIQRIATRRGVVR
Ga0207669_1151515813300025937Miscanthus RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPR
Ga0207677_1017217233300026023Miscanthus RhizosphereVNGPGELTLTSIVLFTLGAYGIASGAASGEQSVVAVGVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVIPRVAARRGVFHSIRVERRSSAPLGVFVRSRFVRVT
Ga0207703_1083094013300026035Switchgrass RhizosphereVFAFTLFVLGIVAPIVSLSRIRVDAWASSDAMVGASHDVKVRLSGRAARVEVRVVDPPGEWWRTASPAEGVVPRIAARRGVFHTIRIELRSSAPLGVFVRSRFVRVALPVPLTVAPRPTLAAPRLRPRPDDAAMSSASTSVHGPGDTVHVREKKGGIAFTKA
Ga0207641_1075305223300026088Switchgrass RhizosphereGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRMYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELIVAPRPAPQSATVAAVTAALRERTIDSVASASPSSPGGGDTVRAVRPYVPGDPARLVHWPPSELHRCRAIFTQAWLA
Ga0209073_1051990713300027765Agricultural SoilMNGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFVIGIVWPIVALSRVELEAWTRTDVTVDEPYEVNVRLRGRCARVEVRFADLPGDAWVTASPASGVVPRVASRRG
Ga0209579_1011232423300027869Surface SoilVSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFIVGIVWPIVSVSRIDLDAWTRTDVAVGERYTVHLRLYGRAARVEVRLLDPSGDWWVTASPGTGEIERVASRRGVFRSLRIEVRSSAPLGVFVRTRVIRVELPYELVVAPRPALTGPRPGAVARPLRERPQDSPVDVSAVASRGGGDTV
Ga0209068_1009025323300027894WatershedsVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFVIGIIWPIVVLSGIEIDAWTPADATVGEQYDVHVQLRGRVSRVELRVLDPPGRWWVTAAPTAGMMPRVASHRGVIRSLRIELRTSAPIGVFARTRVVRVQLPIELSVAPQPAPATSRPAGAAPRLRERPLDGVMAVASNPGQGPGDTVRTVRPYVPGDAARLV
Ga0207428_1048730823300027907Populus RhizosphereVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRS
Ga0265338_1058706013300028800RhizosphereVNGPGELTLTSIVLFTLGAYGVAAGAASGEQTVVAVGVFAFTLFVFGIVLPIASLARLSVEVWGPPDATVGERHELHVRLQGRASRVELRVLDPPGEWWLTAAPTDGIVPRVAGRRGVFHAVRVELRTSAPLGVFIRSRFIRVELPVPLTVAPRAISAAPRLRARPQDDALSTVATAAYGAGDTVRAVRPYVPGDAARLVHWPTSA
Ga0302263_1021883213300028869FenVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALAGVEIAAWAPADATVGETHDLHVRLSGRAPRVEMRVLDPPGQWWVTSAPTDGVIPHLANRRGVFSSVRVELRTSAPLGVFVRVRILRIEL
Ga0311332_1058824523300029984FenLNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFLVGIIWPIVALSGVEVAAWTPSDATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVI
Ga0311334_1112816513300029987FenVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALAGVEIAAWAPADATVGETHDLHVRLSGRAPRVEMRVLDPPGQWWVTSAPTDGVIPHLANRRGVFSSVRVELRTSAPLGVFVRVRILRIELPVPCSVAPRPVSTAPRLYDYPGAGLTSALAAPSQRAG
Ga0311336_1138958213300029990FenVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALAGVEIAAWAPADATVGETHDLHVRLSGRAPRVEMRVLDPPGQWWVTSAPTDGVIPHLANRRGVFSSVRVELRTSAPLGVFVRVRILRIELPVPCSVAPRPVSAAPRLYDYPGAGLTSALAAPSQRAGDTVRA
Ga0311349_1169710313300030294FenPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFLVGIIWPIVALSGVEVAAWTPSDATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFNRIRVELRTSAPLGVFVRTRVLRVELPVELAVAPRPTNEAPRLYERRHDGLTSATAVNGHRVGDTVRSVRPYVPGDPA
Ga0302323_10091906513300031232FenLNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFLVGIIWPIVALSGVEVAAWTPPDATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFNRIRVELRTSAPLGVFVRTRVLRVELPVELAVAPRPTNEAPRLY
Ga0302323_10228307113300031232FenVNGPGELTLTSIVLFTLGAYGIAAGAAAGEQSVVAVGVFAFALFVAGIIWPIVTLSGVEVEAWTPADATVGEPHDVHVQLHGRAARAEVRLLDPPGQWWVTASPAQGIIARVPSRRGVFG
Ga0265320_1037631213300031240RhizosphereLNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALSGVEVAAWTPADAVVGEHHDLHLQLYGHVGRVEVRVLDPPGEWWVTSSPAVGVIPRFANRRGVFRKI
Ga0265340_1028615813300031247RhizosphereVSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVTVEAWAPADATVGEHHDVHVRLHGRVARVELRLLDPVGPWWVTASPADGVITRVAARRGVFSTIRIELRTSAPLGVFVRVRTLRVALRTELSVAPRPVTTEAFSSANAPRLHELPLDGSLSAAPNTGPGDSVRAVRPYL
Ga0265314_1035312423300031711RhizosphereVSGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFALFVLGIIWPIVMLSGVTVEAWAPADATVGEHHDVHVRLHGRVARVELRLLDPVGPWWVTASPADGVITRVAARRGVFSTIRIELRTSAPLGVFVRVRTLRVALRTELSVAPRPVTTEAF
Ga0310907_1079482113300031847SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVL
Ga0310892_1032012323300031858SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIV
Ga0302322_10328051923300031902FenLNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFLVGIIWPIVALSGVEVAAWTPSDATVGEHHDVHVQLYGHVSRVEVRVLDPPGEWWVTSSPADGVIPRFANRRGVFNRIRVELRTSAPLGVFVRTRVLRVELPVELA
Ga0311367_1084905423300031918FenVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALAGVEIAAWAPADATVGETHDLHVRLSGRAPRVEMRVLDPPGQWWVTSAPTDGVIPHLANRRGVFSSVRVE
Ga0310906_1039499423300032013SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVV
Ga0310889_1036993323300032179SoilVSGPGELTLTSIVLFTLGAYGVAAGAASGEQSVVAVGVFAFALFLIGIVWPIVALSAVELEAWTRTDVTVDEPYDVNVRLYGKCSRVELRFADLPGDAWVTASPATGVLPRVASRRGVYHVLRFELRSSAPLGVFVRSRIVRAELPYELVVAP
Ga0335080_1144643923300032828SoilVSGPGELTLTSIVLFTLGAYGIASGAASGEQGVVAIGVFAFALFVVGIVWPIVMLSGVTVEAWVPADVMVGERHDVHLRLHGRVARVELRLLDPAGQWWMTASPANGLVPRVAARRG
Ga0370481_0396275_2_4093300034281Untreated Peat SoilVNGPGELTLTSIVLFTLGAYGIAAGAASGEQSVVAVGVFAFVLFVVGIIWPIVALAGVEIAAWAPADATVGETHDLHVRLSGRAPRVEMRVLDPPGQWWVTSVPTDGVIPHLANRRGVFSSVRIELRTSAPLGVFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.