Metagenome Family F099776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099776
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	134 residues
Representative Sequence	GVRLCLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRSAEFIQNERDIAPLLELLKMAAEKWPSSDGASIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN
Number of Associated Samples	84
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.33 %
% of genes near scaffold ends (potentially truncated)	82.52 %
% of genes from short scaffolds (< 2000 bps)	84.47 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.485 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.476 % of family members)
Environment Ontology (ENVO)	Unclassified (27.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.689 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 16.88% Coil/Unstructured: 46.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10518	TAT_signal	5.83
PF03401	TctC	4.85
PF00496	SBP_bac_5	4.85
PF13467	RHH_4	3.88
PF04392	ABC_sub_bind	3.88
PF03729	DUF308	2.91
PF13376	OmdA	2.91
PF09361	Phasin_2	1.94
PF01135	PCMT	0.97
PF02729	OTCace_N	0.97
PF06577	EipA	0.97
PF13432	TPR_16	0.97
PF07238	PilZ	0.97
PF13488	Gly-zipper_Omp	0.97
PF01042	Ribonuc_L-PSP	0.97
PF02518	HATPase_c	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.88
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	2.91
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.97
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.97
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.97
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
All Organisms	root	All Organisms	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
cellular organisms	root	All Organisms → cellular organisms	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.07 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.16 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.94 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	1.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.94 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.97 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.97 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.88 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.94 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.97 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.97 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.97 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.94 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.97 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.97 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	0.97 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.94 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.97 %
Methylobacterium sp. 174MFSha1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	0.97 %
Bradyrhizobium sp. ORS 285	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 285	0.97 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	0.97 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig17806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1310	Open in IMG/M
3300000891\|JGI10214J12806_10771163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 285	643	Open in IMG/M
3300001867\|JGI12627J18819_10168429	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300003659\|JGI25404J52841_10070308	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300005332\|Ga0066388_100016978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6132	Open in IMG/M
3300005332\|Ga0066388_100133176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	3035	Open in IMG/M
3300005332\|Ga0066388_101636401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1135	Open in IMG/M
3300005332\|Ga0066388_101910139	Not Available	1060	Open in IMG/M
3300005332\|Ga0066388_102126962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300005332\|Ga0066388_107071335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	564	Open in IMG/M
3300005337\|Ga0070682_101198586	Not Available	641	Open in IMG/M
3300005343\|Ga0070687_100668041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300005347\|Ga0070668_100575791	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005356\|Ga0070674_100008270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6186	Open in IMG/M
3300005365\|Ga0070688_100067751	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300005367\|Ga0070667_101829206	Not Available	572	Open in IMG/M
3300005434\|Ga0070709_10051139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2592	Open in IMG/M
3300005434\|Ga0070709_10276568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1219	Open in IMG/M
3300005439\|Ga0070711_101874178	Not Available	527	Open in IMG/M
3300005440\|Ga0070705_101075998	Not Available	657	Open in IMG/M
3300005457\|Ga0070662_100318088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1268	Open in IMG/M
3300005536\|Ga0070697_101887494	Not Available	535	Open in IMG/M
3300005543\|Ga0070672_101534210	Not Available	597	Open in IMG/M
3300005549\|Ga0070704_100329078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1283	Open in IMG/M
3300005713\|Ga0066905_100380219	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300005718\|Ga0068866_10313741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	984	Open in IMG/M
3300005719\|Ga0068861_101537958	Not Available	654	Open in IMG/M
3300005764\|Ga0066903_100124229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3601	Open in IMG/M
3300005764\|Ga0066903_103754869	Not Available	816	Open in IMG/M
3300005842\|Ga0068858_100404035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1313	Open in IMG/M
3300006041\|Ga0075023_100372792	Not Available	610	Open in IMG/M
3300006047\|Ga0075024_100301499	Not Available	786	Open in IMG/M
3300006172\|Ga0075018_10813699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	513	Open in IMG/M
3300006871\|Ga0075434_101083110	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300006904\|Ga0075424_101631542	Not Available	683	Open in IMG/M
3300006914\|Ga0075436_100874561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	671	Open in IMG/M
3300009011\|Ga0105251_10617247	Not Available	516	Open in IMG/M
3300009098\|Ga0105245_10605218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1123	Open in IMG/M
3300009792\|Ga0126374_11269651	Not Available	593	Open in IMG/M
3300009792\|Ga0126374_11886758	Not Available	502	Open in IMG/M
3300010043\|Ga0126380_10357249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1066	Open in IMG/M
3300010043\|Ga0126380_10838101	Not Available	757	Open in IMG/M
3300010043\|Ga0126380_11457871	Not Available	604	Open in IMG/M
3300010359\|Ga0126376_11100639	Not Available	803	Open in IMG/M
3300010359\|Ga0126376_12094686	Not Available	609	Open in IMG/M
3300010361\|Ga0126378_11853791	Not Available	686	Open in IMG/M
3300010362\|Ga0126377_11257483	Not Available	811	Open in IMG/M
3300010362\|Ga0126377_12050313	Not Available	648	Open in IMG/M
3300010366\|Ga0126379_11161425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	878	Open in IMG/M
3300010375\|Ga0105239_12441933	Not Available	609	Open in IMG/M
3300010376\|Ga0126381_100283333	Not Available	2261	Open in IMG/M
3300010376\|Ga0126381_103625115	Not Available	605	Open in IMG/M
3300010398\|Ga0126383_10298710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1607	Open in IMG/M
3300010398\|Ga0126383_10787879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300010398\|Ga0126383_11192881	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300010399\|Ga0134127_11885690	Not Available	675	Open in IMG/M
3300010399\|Ga0134127_12129401	Not Available	640	Open in IMG/M
3300012498\|Ga0157345_1015393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	724	Open in IMG/M
3300012948\|Ga0126375_10292069	Not Available	1127	Open in IMG/M
3300012955\|Ga0164298_11546494	Not Available	520	Open in IMG/M
3300012957\|Ga0164303_10454319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	807	Open in IMG/M
3300012958\|Ga0164299_10769803	Not Available	682	Open in IMG/M
3300012971\|Ga0126369_10120941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2412	Open in IMG/M
3300012984\|Ga0164309_10193294	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300012988\|Ga0164306_11484012	Not Available	580	Open in IMG/M
3300014321\|Ga0075353_1072825	Not Available	757	Open in IMG/M
3300014325\|Ga0163163_11632611	Not Available	705	Open in IMG/M
3300015371\|Ga0132258_11647107	Not Available	1619	Open in IMG/M
3300015371\|Ga0132258_11981554	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300015372\|Ga0132256_101601620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	761	Open in IMG/M
3300015373\|Ga0132257_102617852	Not Available	656	Open in IMG/M
3300015374\|Ga0132255_100749254	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300017947\|Ga0187785_10008784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3397	Open in IMG/M
3300017947\|Ga0187785_10537576	Not Available	589	Open in IMG/M
3300017966\|Ga0187776_11411837	Not Available	531	Open in IMG/M
3300022756\|Ga0222622_11231386	Not Available	551	Open in IMG/M
3300023069\|Ga0247751_1012356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1280	Open in IMG/M
3300023077\|Ga0247802_1000179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4731	Open in IMG/M
3300025321\|Ga0207656_10366867	Not Available	720	Open in IMG/M
3300025560\|Ga0210108_1038650	Not Available	900	Open in IMG/M
3300025903\|Ga0207680_10911062	Not Available	630	Open in IMG/M
3300025927\|Ga0207687_10483167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1032	Open in IMG/M
3300025928\|Ga0207700_10114430	All Organisms → cellular organisms → Bacteria → Proteobacteria	2176	Open in IMG/M
3300025939\|Ga0207665_11521841	Not Available	531	Open in IMG/M
3300026088\|Ga0207641_10002628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16468	Open in IMG/M
3300026774\|Ga0207451_100411	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300026827\|Ga0207591_102518	Not Available	777	Open in IMG/M
3300026836\|Ga0207612_1003027	Not Available	696	Open in IMG/M
3300027445\|Ga0207554_101035	Not Available	902	Open in IMG/M
3300031231\|Ga0170824_114578486	Not Available	828	Open in IMG/M
3300031446\|Ga0170820_14370584	Not Available	755	Open in IMG/M
3300031908\|Ga0310900_10311829	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300032012\|Ga0310902_10511767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	785	Open in IMG/M
3300032017\|Ga0310899_10607096	Not Available	548	Open in IMG/M
3300032122\|Ga0310895_10253245	Not Available	814	Open in IMG/M
3300032174\|Ga0307470_11542498	Not Available	554	Open in IMG/M
3300032179\|Ga0310889_10028456	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300032211\|Ga0310896_10038512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1853	Open in IMG/M
3300032770\|Ga0335085_10060769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5048	Open in IMG/M
3300032783\|Ga0335079_10229531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2049	Open in IMG/M
3300032783\|Ga0335079_12332474	Not Available	507	Open in IMG/M
3300032892\|Ga0335081_10940369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1014	Open in IMG/M
3300033433\|Ga0326726_10159060	Not Available	2065	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.79%
Host-Associated	Host-Associated	25.24%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.93%
Plants	Host-Associated → Plants	25.24%
Aquatic	Environmental → Aquatic	4.85%
Modeled	Engineered → Modeled	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.68%
Sediment	Environmental → Aquatic → Sediment	3.88%
Marine	Environmental → Aquatic → Marine	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%
Roots	Host-Associated → Plants → Roots	0.97%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.81%
Loam	Environmental → Terrestrial → Soil → Loam	20.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026774	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300026836	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027445	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K3-12 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0806.00001750	2166559005	Simulated	GVRLCLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRSAEFIQNERDIAPLLELLKMAAEKWPSSDGASIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN
JGI10214J12806_107711631	3300000891	Soil	HVFKTAQIVVAESAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
JGI12627J18819_101684291	3300001867	Forest Soil	MNALTEQRRHLRKRVFRTVQIVIGEKAPKLECTARDLSALGVRLCLSTTYGIPHAFDVIIDGSRKPARSVWRTCTEIGVLFSEPSQRSPDFIQHEGDIAPLIELLRMAAETWPPAEGDDISEGELFKRDQ
JGI25404J52841_100703081	3300003659	Tabebuia Heterophylla Rhizosphere	RRRRCRSIWRTYTEIGVVFLEATERASNCLQHDVDILPLIELLKMAAEKWSGSETADVSESELFQRDQMLLEMWPEACRRTGVAVHEFPIGVIRLWQQKMGWAN*
Ga0066388_1000169782	3300005332	Tropical Forest Soil	MNALAEQRKHVRKRVLRTVHIVLGDKAPKLECTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSQRSGAFRQHEQDIVPLLELLKMASETWPTSEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGASH*
Ga0066388_1001331763	3300005332	Tropical Forest Soil	MNALLERRMQHRERVFKNAAIILSENSPKLECAARDLSQRGVRLRFSTTYGIPNQFDVLIDGKRRSGRSVWRTYTEMGVMFLDASHQRVEYLQHERDIVPLLELLKMAEEKWPRSGSGNVSETELLRRDQMLLEMWPEACRRSGIEVHDFPIGVIKRWQKEMGWAN*
Ga0066388_1016364011	3300005332	Tropical Forest Soil	MSTLAERRRDVRSRVFKTARIVVAESAPTIECCARDLSGNGARLCLSTTCGLPQQFDVIIDGKRRSVRSVWMTYTEMGVMFAEASQKHADLVERERDIASLIELLKMAEEKWPSSESYEISETEMLSRDRALLDMWPEACRRIGFSKREFPIDVIKRWQKQMG
Ga0066388_1019101391	3300005332	Tropical Forest Soil	MTAFTEQRRHLRKRVFRTVQIVLSERAPKLECTARDLSVLGGRLCLSTTYGIPHAFDVIIGGSRKPVRSVWRTCTEIGVLFSEPSQQSPDIIQHEKDIAPLIELLKMASETWPPSEGGDISESELFERDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEMGAPN*
Ga0066388_1021269622	3300005332	Tropical Forest Soil	MNALTEQRRHLRKRVFRTVQIVLGEKAPKLECTARDLSALGVRLCLSTTYGIPHAFDVIIGGSRKPARSVWRTCTEIGVLFSEPSQRSPDFIQNERDIAPLIELLRMAAETWPPSEGGDISEGELFKRDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEMGAPN*
Ga0066388_1070713351	3300005332	Tropical Forest Soil	KDFARLTVMATVAEQRRHFRKRVFKTAQIVVTENAPMLECRARDLSAFGARLCLPATYGLPQQFDVIIDGERRAVRSVWRTCTEMGVMFAGETQKPADFMERERDVASLIELLKMADEKWPSPESHEISETEMLSRDRALLDMWPEACRRIGFPEREFPIDVIRRWQKKMGWPN*
Ga0070682_1011985861	3300005337	Corn Rhizosphere	TYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPKRSAESIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070687_1006680411	3300005343	Switchgrass Rhizosphere	IDGKRKPARSIWRTCTEIGVMFSDAPKRSAESIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070668_1005757912	3300005347	Switchgrass Rhizosphere	LPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGNDEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0070674_1000082708	3300005356	Miscanthus Rhizosphere	RSHVFKTAQIVVAESAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0070688_1000677512	3300005365	Switchgrass Rhizosphere	QFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQKKMGWPN*
Ga0070667_1018292062	3300005367	Switchgrass Rhizosphere	ARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070709_100511393	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0070709_102765681	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QGVRLRLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNERDIAPLLELLKMAAEKWPSSDDTSIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN*
Ga0070711_1018741782	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNERDIAPLLELLKMAAEKWPSSDDASIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN*
Ga0070705_1010759981	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRLRLSTTYGIPDRFDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070662_1003180881	3300005457	Corn Rhizosphere	APTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0070697_1018874941	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GKRKPARSIWRTCTEIGVMFSDAPKRSAESIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070672_1015342101	3300005543	Miscanthus Rhizosphere	QIVFSGTAPTLECTARDLSLQGVRLRLSTTYGIPDRIDVIIDEKRKPARSIWRTCTEIGVMFSDAPKRSAESIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0070704_1003290783	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0066905_1003802191	3300005713	Tropical Forest Soil	SIWRTYTEIGVMFLEATERTSNCSQHEFDIVPLIELLKMAAEKWPGSETAGVSEIELFQRDKMLLEMWPEACRRTGVAVHEFPIGVIRRWQQKMGWAN*
Ga0068866_103137412	3300005718	Miscanthus Rhizosphere	RLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNEKDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0068861_1015379581	3300005719	Switchgrass Rhizosphere	RDLSDYGARLCLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0066903_1001242291	3300005764	Tropical Forest Soil	LSTTYSIPNQFDLLIDGKRRHCRSVWRTYTEMGVMFLEPSRWPCNFLQHESDIAPLIELLKMGAEKWPNSENDNISESEQFRRDQILLEMWPEACRRTGVPVHEFPIGVIKRWQQKMGLPN*
Ga0066903_1037548691	3300005764	Tropical Forest Soil	QFDLLIDGKRRHCRSVWRTYTEMGVMFLEPSRRPCNFLQHESDIAALIELLNMAAEKWPSSENDNVSESEQFRRDQILLEMWPEACRRTGVPVHEFPIGVIKRWQQKMGLPN*
Ga0068858_1004040353	3300005842	Switchgrass Rhizosphere	RLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPKRSAESIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0075023_1003727921	3300006041	Watersheds	PELECAALDLSTQGVRLRLSTTYGIPHEFDVIIDGKRTPGRSVWRTYTEIGVMFSEASQSADFMGHERDIAPLIELLKMAAKKWPSSESDDVSETELFCRDQILLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN*
Ga0075024_1003014992	3300006047	Watersheds	EFDVIIDGKRTPGRSVWRTYTEIGVMFSEASLSADFMEHERDIAPLIELLKMAEKKWPSSESDDVSETELFCRDQTLLEMWPEACRRTGVGVREFPPGVIKIWKQGMGRAN*
Ga0075018_108136991	3300006172	Watersheds	FRPAHIVLSERAPKLECAALDLSVQGVRLRVSTTYGIPHEFDVIIDGKRTPCRSVWRTYTEIGVMFSEASQSADFIGHERDIAPLIELLEMAAKKWPSSEGDDVSETELFCRDQILLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN*
Ga0075434_1010831102	3300006871	Populus Rhizosphere	LSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPQNDEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0075424_1016315422	3300006904	Populus Rhizosphere	TYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPRPADFLERERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0075436_1008745611	3300006914	Populus Rhizosphere	LRLSTTYGIPDRFDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0105251_106172471	3300009011	Switchgrass Rhizosphere	QFDIIIDGERRAVRSVWRTCTEMGVMFADESRKPADFLERERDGASLIELLKMAEEKWPNPGNDEISESEMLSRDQALLEMRPEACRRIGFPKREFPAAVIKRWQMGWPN*
Ga0105245_106052183	3300009098	Miscanthus Rhizosphere	GVRLRLSTTYGIPDRFDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0126374_112696511	3300009792	Tropical Forest Soil	CFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSQRSGAFRQHEQDIVPLLELLKMASETWPTSEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGVPN*
Ga0126374_118867581	3300009792	Tropical Forest Soil	RVFRTVQIVLSERAPKLECTARDLSVLGGRLCLSTTYGIPHAFDVIIGGSRKPVRSVWRTCTEIGVLFSEPSQQSPDIIQHEKDIAPLIELLKMASETWPPSEGGDISESELFERDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEMGAPN*
Ga0126380_103572491	3300010043	Tropical Forest Soil	MNALAEQRKHVRKRVLRTVHIVFGDKAPKLECTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSQRSGAFRQHEQDIVPLLELLKMASETWPTSEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGASN*
Ga0126380_108381011	3300010043	Tropical Forest Soil	MNALTEQRKHLRKRVFRTVQIVLGEKAPKLECTARDLSALGVRLCLSTTYGIPHAFDVVIGGSRRPVRSVWRTCTEIGVLFSEPSQRSPDFIRHEGDIAPLIELLKMAAETWPPSEGGDISERELFDRDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEM
Ga0126380_114578711	3300010043	Tropical Forest Soil	MTAFTEQRRHLRKRVFRTVQIVLSERAPKLESTARDLSVLGGRLCLSTTYGIPHAFDVIIGGSRKPVRSVWRTCTEIGVLFSEPSQQSPDIIQHEKDIAPLIELLKMASETWPPSEGGDISESELFERDQALLAMWP
Ga0126376_111006392	3300010359	Tropical Forest Soil	MNALTEQRKHLRKRVFRTVQIVLGEKAPKLECTARDLSALGVRLCLSTTYGIPHAFDVVIGGSRRPVRSVWRTCTEIGVLFSEPSQRSPDFIRHEGDIAPLIELLKMAAETWPPSEG
Ga0126376_120946861	3300010359	Tropical Forest Soil	CTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSQRSGAFRQHEQDIVPLLELLKMASETWPTSEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGASN*
Ga0126378_118537912	3300010361	Tropical Forest Soil	VQIVLGEKAPRLECIVRDLSVQGLRLCLPTTYGIPHSFDVMIGGSRKPARSVWRTCTEIGVLFSEPTQQPVDVLRHDADIVPLIELLKMASEKWSASTDGDISEGEMLKRDQALLAMWPEACRRAGVPVHEFPLGVIRRWQKEMGLPN*
Ga0126377_112574832	3300010362	Tropical Forest Soil	MNALTEQRRHLRKRVFRTVQIVFGEKAPRLECTARDLSALGVRLCLSTTYGIPHAFDVIIGGSRKPARSVWRTCTEIGVLFSEPSQRSPDFIQNERDIAPLIELLKMAAETWPPSEGGDISEGELFKRDQALLAMWPEACRRAGVPLHEFPLGVI
Ga0126377_120503131	3300010362	Tropical Forest Soil	AILVTENSPKLECSVRDLSPQGVRLHLSTTYGIPYQFDVLIDGRRRRCRSIWRTYTDIGVMFLEATEPTANCLQHEVDIVPLIELLKMAAEKWPGSEAADVSEIELFQRDKMLLEMWPEACRRTGVTLHEFPIGVIRRWQQKMGWAN*
Ga0126379_111614252	3300010366	Tropical Forest Soil	DLSPQGVRLHLSTTYSIPNQFDLLIDGKRRHCRSVWRTYTEMGVMFLEPSRRPCNFLQHESDIAPLIELLKMAAEKWPSSESDNVSESEQLRRDQILLEMWPEACRRTGVPVHEFPIGVIKRWQQNMGWPN*
Ga0105239_124419332	3300010375	Corn Rhizosphere	YGARLCLSATYGLPQQFDVIIDGKRRSVRSVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0126381_1002833331	3300010376	Tropical Forest Soil	MNALTEQRKHLRKRVFRTVQIVLGEKAPKLECTARDLSALGVRLCLSTTYGIPHAFDVVIGGSRRPVRSVWRTCTEIGVLFSEPSQRSPDFIRHEGDIAPLIELLKMAAETWPPSEGGDISERELFDRDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEMGAPN*
Ga0126381_1036251151	3300010376	Tropical Forest Soil	MNALAEQRKHVRKRVLRTVHIVLGDKAPKLECTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSERSGAFRQHEQDIVPLLELLKMASETW
Ga0126383_102987101	3300010398	Tropical Forest Soil	MNALAEQRKHVRKRVLRTVHIVLGDKAPKLECTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSERSGAFRQHEQDIVPLLELLKMASETWPTSEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGASN*
Ga0126383_107878791	3300010398	Tropical Forest Soil	HLSTTYSIPNQFDLLIDGKRRHCRSVWRTYTEMGVMFLEPSRRPCNFLQHESDIAPLIELLKMAAEKWPSSESDNVSESEQLRRDQILLEMWPEACRRTGVPVHEFPIGVIKRWQQNMGWPN*
Ga0126383_111928812	3300010398	Tropical Forest Soil	HLSTTYSIPNQFDLLIDGKRRHCRSVWRTYTEMGVMFLEPSRWPCNFLQHESDIAPLIELLKMGAEKWPNSENDNISESEQFRRDQILLEMWPEACRRTGVPVHEFPIGVIKRWQQKMGLPN*
Ga0134127_118856902	3300010399	Terrestrial Soil	STTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNEKDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN
Ga0134127_121294011	3300010399	Terrestrial Soil	ECRARDLSDYGARLCLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0157345_10153932	3300012498	Arabidopsis Rhizosphere	QQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGNDEISESEMLSRDRALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0126375_102920692	3300012948	Tropical Forest Soil	MGQDAMNALLERRMQHRERVFKNAAIILSETSPKLECAARDLSQRGVRLRFSTTYGIPNQFDVLIDGKRRSGRSVWRTYTEMGVMFLDASHQRVEYLQHERDIVPLLELLKMAEEKWPRSGSGNVSETELLRRDQMLLEMWPEACRRSGIEVHDFPIGVIKRWQKEMGWAN*
Ga0164298_115464941	3300012955	Soil	STTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNERDIAPLLELLKMAAEKWASSDDTSIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN
Ga0164303_104543192	3300012957	Soil	QGVRLRLSTTYGIPDRFDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMSPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0164299_107698032	3300012958	Soil	SLQGVRLRLSTTYGIPDRFDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0126369_101209412	3300012971	Tropical Forest Soil	MNALAEQRKHVRKRVLRTVHIVLGDKAPKLECTARDLSAQGVRLCFSTTSGIPHAFDVIIGGSRKPALSVWRTCTEIGVLFPEPSERSGAFRQHEQDIVPLLELLKMASETWPASEGGDISESEIFRRDEALLAMWPEACRRAGVPVHEFPIGVIRRWQKEMGASN*
Ga0164309_101932943	3300012984	Soil	MSTLAERRRHVRSHVFKTAQIVVAKRAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0164306_114840121	3300012988	Soil	RFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAEFIQNERDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN*
Ga0075353_10728252	3300014321	Natural And Restored Wetlands	DLSVQGVRLRLTTTYGIPHEFDVIIDGKRKPSRSVWRTNTEMGVMFSDASQRSADFTRHERDIVPLIELLKMAEEKWPSSESDEISETELLSRDQALLDMWPEACRRTGVLVHEFPIGVIKRWQQEMGWPN*
Ga0163163_116326111	3300014325	Switchgrass Rhizosphere	TYGLPQQFDIIIDGERRAVRSFWRTCTEMGVMFADESRKPADFLERERDGASLIELLKMAEEKWPNPGNDEISESEMLSRDQALLEMRPEACRRIGFPKREFPAAVIKRWQMGWPN*
Ga0132258_116471071	3300015371	Arabidopsis Rhizosphere	GIPHAFDVIIGGSRKPARSVWRTCTEIGVSFSEPSQRSPDFIQNEKDIAPLIELLKMASETWPLSEGGDISESELFKRDQALLAMWPEACRRAGVPLHEFPLGVIRRWQQEMGAPN*
Ga0132258_119815541	3300015371	Arabidopsis Rhizosphere	MSTLAERRRHVRSHIFKTAQIVVAERAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0132256_1016016202	3300015372	Arabidopsis Rhizosphere	SIWRTCTEIGVMFSDAPQRRAESIQNERDIAPLLELLRMAAEKWPSSDDANIPESELLKRDQVLLDMWPEACRRTGIPVHEFPTGVIKRWQQEMGWPN*
Ga0132257_1026178521	3300015373	Arabidopsis Rhizosphere	TYGLPQQFDIIIDGERRAVRSVWRTCTETGVMFADESPRPADFLERERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN*
Ga0132255_1007492543	3300015374	Arabidopsis Rhizosphere	MSTLAERRRHVHSHVFKTAQIVVAERAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN*
Ga0187785_100087843	3300017947	Tropical Peatland	MALASLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLRMAEEKWPNPGSEEISESEMLSRDQAMLDMWPEACRRVGFPKREFPAAVIKRWQRKMGWPN
Ga0187785_105375761	3300017947	Tropical Peatland	CAALDLSVQGVRLRVSTTYGIPHEFDVIIDGKRTLGRSVWRTYTEIGVIFSEASQSADFVGHERDIAPLIELLKIADKKWPSSESDDVSEIELFCRDQVLLEMWPEACRRAGVGVREFPPGVIELWKQRMGRTN
Ga0187776_114118371	3300017966	Tropical Peatland	RAARIVLGDNAPKVECAASDLSTQGVRLRLSTTWGIPHRFDVVIDGKRRVGRSVWRTNTEMGVMFSEASQRLINFMLEREKDIAPLIELLKIAAEKWPSSESGDISESESLRRDRVLLEMWPEACRRTGVEVHEFPAGVIKRWQQEMGWPN
Ga0222622_112313861	3300022756	Groundwater Sediment	ARDLSVQGVRLCLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDVPQRSAEFIQNERDIAPLLELLKMAAEKWPSSDGASIPESELLKRDQALLDMWPEACRRTGIPVHEFPNGVIKRWQQEMGWPN
Ga0247751_10123561	3300023069	Soil	PQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0247802_10001796	3300023077	Soil	CLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0207656_103668672	3300025321	Corn Rhizosphere	SHVFKTAQIVVAESAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRSVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0210108_10386501	3300025560	Natural And Restored Wetlands	PKLECKVIDLSAQGVRLRLSTTYGIPHEFDVIIDGKRKPSRSVWRTNTEMGVMFSDASQRSADFTRHERDIVPLIELLKMAEEKWPSSESDEISETELLSRDQALLDMWPEACRRTGVLVHEFPIGVIKRWQQEMGWPN
Ga0207680_109110621	3300025903	Switchgrass Rhizosphere	YGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNEKDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN
Ga0207687_104831671	3300025927	Miscanthus Rhizosphere	RKPARSIWRTCTEIGVIFSDGPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN
Ga0207700_101144301	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRLRLSTTYGIPDRFDVIIDGKRKPARSIWRTCTEIGVMFSDAPQRPAESIQNEKDIAPLLELLKMAAEKWPSSDDVNIPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN
Ga0207665_115218411	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	FDVVIDGKRKPARSIWRTCTEIGVIFSDAPQRSAESIQNERDIAPLLELLKMAAERWPSSDGAIVPESELLKRDQALLDMWPEACRRTGIPVHEFPIGVIKRWQQEMGWPN
Ga0207641_100026281	3300026088	Switchgrass Rhizosphere	APTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0207451_1004112	3300026774	Soil	MSTLAERRRHVHSHVFKTAQIVVAERAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0207591_1025181	3300026827	Soil	GLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0207612_10030272	3300026836	Soil	RLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0207554_1010351	3300027445	Soil	RHVRSHVFKTAQIVVAESAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0170824_1145784861	3300031231	Forest Soil	SLKLECSTHDLSEQGARLCLATTYGIPHEFDVIIDGNRKPARSVWRTCTEIGVIFSEASQRCADFIRHEKDIAPLLELLKMAAEMWPTSEGEEITESELLRRDQVLLDMWPEACRRTGVPVHEFPIGVIKRWQQEMGSPN
Ga0170820_143705841	3300031446	Forest Soil	KLECSTHDLSEQGARLCLATTYGIPHEFDVIIDGNRKPARSVWRTCTEIGVIFSEASQRCADFIRHEKDIAPLLELLKMAAEMWPTSEGEEITESELLRRDQVLLDMWPEACRRTGVPVHEFPIGVIKRWQQEMGSPN
Ga0310900_103118291	3300031908	Soil	RKNLQDYQTWQQFLSKDDSFGSACSKPRKSLSLRAHQYSSDRARDLSDYGARLCLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPRPADFLERERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN
Ga0310902_105117672	3300032012	Soil	SATYGIPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN
Ga0310899_106070961	3300032017	Soil	LECRARDLSDYGARLCLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPRPADFLERERDVASLIELLKMAEEKWPNPGSEEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN
Ga0310895_102532452	3300032122	Soil	TWQQFLSKDDSFGSACSKPRKSLSLRAHQYSSDRARDLSDYGARLCLSATYGLPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLECERDVASLIELLKMAEEKWPNPGNDEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN
Ga0307470_115424981	3300032174	Hardwood Forest Soil	LPQQFDIIIDGERRAVRSVWRTCTEMGVMFADESPKPADFLERERDVASLIELLKMAEEKWPNPGNDEISESEMLSRDQALLEMWPEACRRIGFPKREFPAAVIKRWQRKMGWPN
Ga0310889_100284562	3300032179	Soil	MSTLAERRRHVHSHVFKTAQIVVAESAPTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRPVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0310896_100385121	3300032211	Soil	APTIECRARDLSGYGARLCLSTTYGLPQQFDVIIDGKRRSVRSVWMTYTEMGVMFAEASQKSADLVECERDIASLIELLKMAEEKWPSSESYEISETEMLCRDQALLDMWPEACRRIGFSKREFPIDVIKLWQKQMGWPN
Ga0335085_100607691	3300032770	Soil	MNAVTEKRRHFRKRVFRPAHIVLSEMAPKLECAAFDLTVQGVRLRVSTTYGIPHEFDVIIDGKRTPGRSVWRTYTEIGVMFSEASQSTDFMEHERDIAPLIELLEMAAKKWPSSGSDDVSETELFCRDQTLLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN
Ga0335079_102295314	3300032783	Soil	VFRPAHIVLGEKAPKLECAALDLSAQGVRLRLSTTYGIPHEFDVIIDGKRTPGRSVWRTYTEIGVIFSEEASQSADFTESERDIAALIELLEMADKKWPSSESDNISEFELFRRDQNLFEMWAEACQRTGVGVREFPPGVIELWKRMMGGAH
Ga0335079_123324741	3300032783	Soil	LRVSTTYGIPHEFDVIIDGKRTPGRSVWRTYTEIGVMFSEASQSTDFMEHERDIAPLIELLEMAAKKWPSSGSDDVSETELFCRDQTLLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN
Ga0335081_109403691	3300032892	Soil	WRTYTEIGVMFSEASQSTDFMEHERDIAPLIELLEMAAKKWPSSGSDDVSETELFCRDQTLLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN
Ga0326726_101590604	3300033433	Peat Soil	ECAALDLSVQGVRLRVSTTYGIPHEFDVIIDGKRTPGRSVWRTYTEIGVMFSEASQSADFIGHERDIAPLIELLEMAAKKWPSSEGDDVSETELFCRDQTLLEMWPEACRRTGVGVREFPPGVIELWKQRMGRAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences