Metagenome / Metatranscriptome Family F099725

Overview

Basic Information

• Family ID: F099725
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 103
• Average Sequence Length: 42 residues
• Representative Sequence: IQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN
• Number of Associated Samples: 89
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 7.77 %
• % of genes from short scaffolds (< 2000 bps): 6.80 %
• Associated GOLD sequencing projects: 84
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (93.204 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.738 % of family members)
• Environment Ontology (ENVO): Unclassified (21.359 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (45.631 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 38.24%
  β-sheet: 0.00%
  Coil/Unstructured: 61.76%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01676	Metalloenzyme	62.14
PF06415	iPGM_N	5.83
PF01381	HTH_3	1.94
PF07609	DUF1572	0.97
PF00528	BPD_transp_1	0.97
PF13683	rve_3	0.97
PF13185	GAF_2	0.97
PF02897	Peptidase_S9_N	0.97
PF03952	Enolase_N	0.97
PF07040	DUF1326	0.97
PF02310	B12-binding	0.97
PF05163	DinB	0.97
PF13426	PAS_9	0.97
PF07238	PilZ	0.97
PF12704	MacB_PCD	0.97
PF13551	HTH_29	0.97
PF02265	S1-P1_nuclease	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	5.83
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.97
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.97
COG1770	Protease II	Amino acid transport and metabolism [E]	0.97
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
All Organisms	root	All Organisms	6.80 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
cellular organisms	root	All Organisms → cellular organisms	6.80 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.80 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.85 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.85 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300006052|Ga0075029_100342148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962
3300011271|Ga0137393_11202899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643
3300019786|Ga0182025_1087333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693
3300021046|Ga0215015_10690495	All Organisms → cellular organisms → Bacteria → Acidobacteria	650
3300025922|Ga0207646_10084862	All Organisms → cellular organisms → Bacteria	2833
3300029943|Ga0311340_11053631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664
3300033158|Ga0335077_10460515	Not Available	1353
3300033826|Ga0334847_008426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.20%
Host-Associated	Host-Associated	6.80%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.58%
Aquatic	Environmental → Aquatic	12.62%
Plants	Host-Associated → Plants	6.80%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.76%
Sediment	Environmental → Aquatic → Sediment	6.80%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Peat	Environmental → Terrestrial → Peat	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.81%
Loam	Environmental → Terrestrial → Soil → Loam	20.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated
3300029943	I_Palsa_N3 coassembly	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_101263833	3300001686	Soil	SRKAPDPKHAKDFSREDLHDLELIAGLLATAPAVIAN*
Ga0068966_12757471	3300004476	Peatlands Soil	IQISRKALDAKFAQDFSREDLHDLELVAGLLATAPALIAN*
Ga0062388_1000438067	3300004635	Bog Forest Soil	IQISRKALDARFAQDFSREDLHDLELAAEVLASSPAIMLN*
Ga0070709_117541121	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VVGVIQISRKALDPKFAQDFSREDLHDLELVAGLLATAPALMTN*
Ga0070714_1009582701	3300005435	Agricultural Soil	VGVIQISRKGLDSKLAQDFSREDLHDLELVAGLLASAPAMRAN*
Ga0070713_1001252783	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DKKVIGVIQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN*
Ga0070713_1014199892	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIQISRKGLDPRFAQDFSREDLHDLELAAGLLATAPALMSN*
Ga0066687_101442152	3300005454	Soil	IGHDKAVIGVIQISRKALDPKHAQDFSREDLHDLELIAGLLATAPAVIAN*
Ga0070735_103550022	3300005534	Surface Soil	IQISRKGLDPKYAKDFSREDLHDLELAAGLLATAPALLAN*
Ga0066698_101239041	3300005558	Soil	RKGLDPRFAPDFSREDLHDLELAAGVLASSPVLLAN*
Ga0070761_103853101	3300005591	Soil	RKGLDPKYAPDFSREDLHDLEIAAGLMATAPALMSN*
Ga0070762_101706431	3300005602	Soil	VGVIQISRKALDARFAQDFSREDLHDLELAAGILASAPAIMLN*
Ga0070762_104101132	3300005602	Soil	KALDAKFAQDFSREDLHDLELVAGLLATAPALMAN*
Ga0070764_110114302	3300005712	Soil	GVIQISRKGLDSKLAQDFSREDLHDLELVAGLLATAPALLSS*
Ga0075297_10282621	3300005878	Rice Paddy Soil	PDKAVVGVIQISRKAPDPKHAKDFSREDLHDLELVAGLLATAPAVIAN*
Ga0070717_101366533	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VVGVIQISRKGLDAKHAKDFSREDLHDLELAAGLLATAPALLAN*
Ga0066651_104493622	3300006031	Soil	QISRKAPDPKHAKDFSREDLHDLELIAGLLATAPAVIAN*
Ga0075029_1003421482	3300006052	Watersheds	MDQGSNVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN*
Ga0075017_1004477083	3300006059	Watersheds	NVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN*
Ga0075017_1005984881	3300006059	Watersheds	IQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN*
Ga0075017_1008444592	3300006059	Watersheds	VGVIQISRKGLDPRYAQDFSREDLHDLELAAGLLATAPALFAN*
Ga0070716_1012211881	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN*
Ga0075014_1006774181	3300006174	Watersheds	DQGSNVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN*
Ga0070712_1019262182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IGVIQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAS*
Ga0070765_1006228391	3300006176	Soil	GVIQISRKGLDPRFAQDFSREDLHDLELAAGLLATAPALLEN*
Ga0066659_112771412	3300006797	Soil	VIQISRKGLDPRFAPDFSREDLHDLELAAGVLASSPVLLAN*
Ga0066709_1000298741	3300009137	Grasslands Soil	DSNVLGVIQISRKGTDSRFAPDFSRDDLHDLETAAGVLASSPVLLES*
Ga0126373_112417461	3300010048	Tropical Forest Soil	GLDPKLAQDFSREDLHDLELLTGLLATAPAVLTN*
Ga0105239_117739112	3300010375	Corn Rhizosphere	AVVGVIQISRKAPDPKHAKDFSREDLHDLELIAGLLATAPAVIAN*
Ga0105239_124968202	3300010375	Corn Rhizosphere	SRKALDPKHAQDFSREDLHDLELIAGLLATAPVITAN*
Ga0126381_1021472051	3300010376	Tropical Forest Soil	VVGVIQISRKGLDPKLAQDFSREDLHDLELLAGLLATAPAVLTN*
Ga0138573_12859152	3300011089	Peatlands Soil	VIQISRKALDAKFAQDFSREDLHDLELVAGLLATAPALIAN*
Ga0137392_114884402	3300011269	Vadose Zone Soil	KVLDPKLAKDFSREDLHDLELAAGLLATAPALLAN*
Ga0137393_112028992	3300011271	Vadose Zone Soil	DRDLNVLGVIQISRKGLDSRFAQDFSREDLHDLELAAGVLATSPVLLDN*
Ga0137397_110741972	3300012685	Vadose Zone Soil	EQNVVGVIQISRKGLDPRFAQDFSREDLHDLELAAGLLATAPALLAN*
Ga0137410_115867192	3300012944	Vadose Zone Soil	GVIQISRKGVDSRFAPDFSREDLHDLELAAGVLASSPVLLSN*
Ga0164307_114759741	3300012987	Soil	GLDPKFAQDFSREDLHDLELAAGLLATAPALMSN*
Ga0134079_107643672	3300014166	Grasslands Soil	QISRKALDSKFAQDFSREDLHDLELVAGLLATAPALMAN*
Ga0181522_101825763	3300014657	Bog	GVIQISRKALDARFAEDFSREDLHDLELAAEILASAPAIMLN*
Ga0182032_103349792	3300016357	Soil	IQISRKALDPKFAQDFSREDLHDLELAAGLLATAPALMSN
Ga0187817_101339442	3300017955	Freshwater Sediment	SRKGLDPKYAQDFSREDLHDLELAAGLLATAPALVEN
Ga0187817_108290161	3300017955	Freshwater Sediment	KALDPKFAQDFSREDLHDLEVAAGLLSAAPALLEN
Ga0187781_114433141	3300017972	Tropical Peatland	RKGLDPKFAQDFGREDLHDLEIVAGLLATAPALLNS
Ga0187875_104667021	3300018035	Peatland	RKALDPKFAQDFSREDLHDLELVTGLLATAPALLAN
Ga0187784_102289272	3300018062	Tropical Peatland	QVSRKGVDPRFAQDFSREDLHDLELVAGLLATAPALVSN
Ga0187770_103373904	3300018090	Tropical Peatland	VIQISRKALDAKYAQDFSREDLHDLEVAAGLLATAPALMAN
Ga0187770_108336941	3300018090	Tropical Peatland	IQISRKALDAKYAQDFSREDLHDLEVAAGLLATAPALLAN
Ga0187770_109383552	3300018090	Tropical Peatland	ISRKGLDARFAQDFSRDDLHDLEVVAGLLATAPALLAN
Ga0066655_107812052	3300018431	Grasslands Soil	IGVIQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN
Ga0182025_10873332	3300019786	Permafrost	DQDSSVLGVIQVSRKGLDPRFTQDFSREDLHDLELAAGLLATSPVLQA
Ga0210403_101357901	3300020580	Soil	IQISRKGLDSKLGQDFSREDLHDLELAAGLLATAPALLTN
Ga0210403_109651212	3300020580	Soil	VVGVIQISRKALDAKFAKDFSREDLHDLELAAGLIATAPALLAN
Ga0210403_114672792	3300020580	Soil	AVVGVIQISRKALDSKFAQDFSREDLHDLELVAGLLATAPALMAN
Ga0215015_106904951	3300021046	Soil	MDHDSNVIGVIQISRKGADSRFAPDFSRDDLHDLETAAGVLASSPVLLQS
Ga0210405_104819062	3300021171	Soil	RKALDSKFAQDFSREDLHDLELVAGLLATAPALMAN
Ga0210388_115034682	3300021181	Soil	ISRKGLDPRFAQDFSREDLHDLELAAGLLATAPALLEN
Ga0210391_109325482	3300021433	Soil	KALDPRFAQDFSREDLHDLELAAGILCTAPALSAN
Ga0210391_112502671	3300021433	Soil	ISRKALDARFAQDFSREDLHDLELAAEILASAPAIMLN
Ga0224560_1128182	3300023019	Soil	QISRKALDAKFAQDFSREDLHDLELVAGLLATAPALLAN
Ga0224561_10048852	3300023030	Soil	GVIQISRKALDARFAQDFSREDLHDLELAAGILASAPAIMLN
Ga0208820_11062012	3300025576	Peatland	VGVIQISRKGLDPKYAQDFSREDLHDLEIVAGLLATAPALLAN
Ga0207692_103741812	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VIQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN
Ga0207646_100848625	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IQISRKGADSRFAPDFSRDDLHDLETAAGVLASSPVLLQN
Ga0207646_105815331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AVVGVIQISRKGLDPKSAKDFSREDLHDLELAAGLLATAPALMAN
Ga0207664_106345041	3300025929	Agricultural Soil	VGVIQISRKGLDSKLAQDFSREDLHDLELVAGLLASAPAMRAN
Ga0207702_120431212	3300026078	Corn Rhizosphere	ISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN
Ga0209474_103250841	3300026550	Soil	SRKALDPKHAQDFSREDLHDLELIAGLLATAPAVIAN
Ga0208827_11926872	3300027641	Peatlands Soil	GVIQISRKGLDSRFAQDFSREDLHDLELAAGLLATAPALLAN
Ga0209007_11543742	3300027652	Forest Soil	SRKGLDPKYAPDFSREDLHDLEIAAGLMATAPALMSN
Ga0209626_11223561	3300027684	Forest Soil	VGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLAGDGDASSI
Ga0209274_102065192	3300027853	Soil	DSNVVGVIQVSRKGLDPKYAPDFSREDLHDLEIAAGLMATAPALMSN
Ga0209517_105768891	3300027854	Peatlands Soil	RDSNVMGVIQISRKGLDSRFAQDFSREDLHDLELAAGVLASSPVLLEN
Ga0209283_101369015	3300027875	Vadose Zone Soil	ISRKGLDSRFAQDFSREDLHDLELAAGVLATSPVLLDN
Ga0209169_106020331	3300027879	Soil	GVIQISRKALDAKFAQDFSREDLHDLELAAGLLATAPALLAN
Ga0209590_104056692	3300027882	Vadose Zone Soil	SRKGLDPRFAPDFSREDLHDLELAAGVLASSPVLLAN
Ga0209067_102557453	3300027898	Watersheds	SNVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN
Ga0209698_105131502	3300027911	Watersheds	NVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALLAN
Ga0209168_100926062	3300027986	Surface Soil	ISRKGLDSRFAQDFSREDLHDLELAAGLLATAPALLES
Ga0209168_102457442	3300027986	Surface Soil	IQISRKGLDPKYAKDFSREDLHDLELAAGLLATAPALLAN
Ga0265355_10169203	3300028036	Rhizosphere	QISRKALDARFAPDFSREDLHDLELAAEILASAPAIMLN
Ga0265338_103427171	3300028800	Rhizosphere	SRKGLDPKFAKDFSREDLHDLELAAGLLATAPALLAN
Ga0311340_110536311	3300029943	Palsa	DQDGVVVGVIQISRKGLDSKYAQDFSREDLHDLELVAGLLATAPALLEN
Ga0311371_107575731	3300029951	Palsa	RDSVVVGVIQISRKALDAKFAQDFSREDLHDLELAAGLLATAPALLEN
Ga0265340_102212061	3300031247	Rhizosphere	DSAVVGVIQISRKGDDPSFAQDFSREDLHDLELIAGLLASAPALIAN
Ga0265331_102307942	3300031250	Rhizosphere	VGVIQISRKGLDSKYAQDFSREDLHDLELAAGLLATAPALLEN
Ga0302326_126208491	3300031525	Palsa	VLGVLQISRKGLDPRFAPDFSREDLHDLELAAGVLAGSPVLTN
Ga0307476_102156621	3300031715	Hardwood Forest Soil	LVVVGVIQISRKGLDSKLAQDFSREDLHDLELVAGLLATAPALLAN
Ga0307476_103004572	3300031715	Hardwood Forest Soil	RNSTVVGVIQISRKGLDPKLAKDFSREDLHDLELAAGLLATAPALLAN
Ga0308175_1000225377	3300031938	Soil	DKKVIGVIQISRKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN
Ga0318540_104864941	3300032094	Soil	SAVVGVIQISRKGLDPKFAQDFSREDLHDLELAAGLLATAPALMSN
Ga0307472_1012187852	3300032205	Hardwood Forest Soil	ISRKALDPKFAQDFSREDLHDLELAAGLLATAPALMTN
Ga0335085_103783723	3300032770	Soil	KGLDPKFAQDFSREDLHDLELAAGLLATAPALMAN
Ga0335080_100478455	3300032828	Soil	KGLDPKFAQDFSREDLHDLELVAGLLATAPALMQN
Ga0335081_109729392	3300032892	Soil	VVGVIQISRKGLDARFAQDFSRDDLHDLEIVAGLLSTAPALMAN
Ga0335069_105900241	3300032893	Soil	IQISRKGLDPKFAQDFSREDLHDLELVAGLLATAPALMSN
Ga0335074_101714381	3300032895	Soil	TVVGVIQISRKGLDPKYAQDFSREDLHDLEIAAGLIATAPALLAN
Ga0335076_106286212	3300032955	Soil	RASSVVGVIQISRKGLDPKLAQDFSREDLHDLELVAGLLATAPAVIAN
Ga0335073_101170231	3300033134	Soil	VGVIQISRKGLDPKYAHDFSREDLHDLEIAAGLIATAPALLEN
Ga0335077_104605152	3300033158	Soil	MDKGTAVVGVIQISRKGLDARFAQDFSRDDLHDLEIVAGLLATAPALLAN
Ga0326728_101851723	3300033402	Peat Soil	KGLDARFAQDFSREDLHDLEVVAGLLATAPALLAN
Ga0310810_113628922	3300033412	Soil	RKALDPKQAHDFSREDLHDLELIAGLLATAPVITAN
Ga0334847_008426_908_1060	3300033826	Soil	MDRDSVVVGVIQISRKGLDSRFAQDFSREDLHDLELAAGLLATAPALLAN
Ga0334790_001153_22633_22743	3300033887	Soil	RKALDSKFAQDFSREDLHDLELAAGLLATAPALLTN