NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099718

Metagenome / Metatranscriptome Family F099718

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099718
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 104 residues
Representative Sequence MPARQLWAFLTDADVRELIGKIGGREPGLAVSQGRYLRGDPQALLVDPAALERRESLPGERRTYLLHRKHSAEIVTHLQPAGPFAGWSQIDEE
Number of Associated Samples 82
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 50.00 %
% of genes near scaffold ends (potentially truncated) 1.94 %
% of genes from short scaffolds (< 2000 bps) 1.94 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (98.058 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(39.806 % of family members)
Environment Ontology (ENVO) Unclassified
(51.456 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.311 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190
1JGI25389J43894_10535502
2Ga0063455_1003360921
3Ga0063455_1013388352
4Ga0066677_102412971
5Ga0066677_104626981
6Ga0066673_100953342
7Ga0066679_109367662
8Ga0066690_101911131
9Ga0066688_100366201
10Ga0066688_100965032
11Ga0066688_103009612
12Ga0066684_100674181
13Ga0066671_100054271
14Ga0066675_111387982
15Ga0066388_1084110301
16Ga0066686_100062375
17Ga0066689_100156501
18Ga0066687_102494351
19Ga0070741_113216071
20Ga0066697_100403331
21Ga0070696_1019807871
22Ga0070693_1002641222
23Ga0066701_100590962
24Ga0066701_106206112
25Ga0066661_103178281
26Ga0066698_102400452
27Ga0066700_109844882
28Ga0066670_100821671
29Ga0066699_103228192
30Ga0066703_102734152
31Ga0066703_107479812
32Ga0066703_108444891
33Ga0066705_100468511
34Ga0066705_103234511
35Ga0066705_108298122
36Ga0068856_1012411891
37Ga0075282_10686112
38Ga0066651_101339322
39Ga0070716_1014008931
40Ga0070716_1017664301
41Ga0066659_117191142
42Ga0066660_101036471
43Ga0066660_116500791
44Ga0075426_114632212
45Ga0075424_1011112902
46Ga0075436_1005702871
47Ga0099793_101378522
48Ga0099794_101618121
49Ga0066710_1023114472
50Ga0066709_1001275451
51Ga0066709_1014808302
52Ga0099792_100089224
53Ga0099792_108056032
54Ga0075423_121055481
55Ga0099796_101464211
56Ga0134063_106796102
57Ga0137393_105751012
58Ga0137382_102924761
59Ga0137399_105716401
60Ga0137360_115739082
61Ga0137361_103732852
62Ga0137361_106380882
63Ga0150984_1190685533
64Ga0137394_101613562
65Ga0137359_104203922
66Ga0137419_103864871
67Ga0137419_106943252
68Ga0137407_113008761
69Ga0137410_102514372
70Ga0134087_106642752
71Ga0134081_101348222
72Ga0134079_102852752
73Ga0167647_10836912
74Ga0137418_106650451
75Ga0137403_109095231
76Ga0066667_100490913
77Ga0066662_123490931
78Ga0213851_10738041
79Ga0209802_11265452
80Ga0209802_11331322
81Ga0209473_10939992
82Ga0209803_11244171
83Ga0209803_12275491
84Ga0209804_12088342
85Ga0209378_10601731
86Ga0209806_11188372
87Ga0209805_11358251
88Ga0209805_13055182
89Ga0209805_13504971
90Ga0209577_100322041
91Ga0179587_111597242
92Ga0209588_12603732
93Ga0209701_107411972
94Ga0209488_104073471
95Ga0209488_111900662
96Ga0307469_117234552
97Ga0307468_1003426611
98Ga0318566_105700342
99Ga0307473_107521321
100Ga0307473_111107392
101Ga0315287_118174732
102Ga0335085_121065601
103Ga0335077_107021031
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.36%    β-sheet: 18.18%    Coil/Unstructured: 64.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MPARQLWAFLTDADVRELIGKIGGREPGLAVSQGRYLRGDPQALLVDPAALERRESLPGERRTYLLHRKHSAEIVTHLQPAGPFAGWSQIDEESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
98.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Watersheds
Sediment
Vadose Zone Soil
Glacier Forefield Soil
Grasslands Soil
Surface Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Rice Paddy Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Populus Rhizosphere
Avena Fatua Rhizosphere
23.3%3.9%39.8%5.8%3.9%4.9%3.9%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25389J43894_105355023300002916Grasslands SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRVYLLHRKYSADIVTH
Ga0063455_10033609213300004153SoilMVRAMPARQLWAFLTERDTDQLLAGIAAREPGLVMSQGRYLRGDPAELLRDPKMLERRESLPGERRVYLLHRKHSADIVTHLQPEGPFAGWAQIDEERSDCMVL
Ga0063455_10133883523300004153SoilMPARQIWLFLFERDVSALIDDLQGREPGLVASWGRYLQGNPRDLLDDPSRLTRRESLPGERRLYLLHRKHSSDVVTHLQPAGPFAGWMQIDEERTDALVLRIPDAREGEIQPARLYAH
Ga0066677_1024129713300005171SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYS
Ga0066677_1046269813300005171SoilMAARLLWAFLTGKDVRDLLDGIEQREPGLVHSGGRYFRGDAQNLITDPSRLERRESLPGEKRIYLFHRKHSADVVAHPQPSGPFAGWSQIDEERSDCLVLRLKDAPQGELEPAQLYAHVT
Ga0066673_1009533423300005175SoilMAARQLWFFFTERDVEALIATLQSREPGLVVSQGRYLRGDPQDLLLGPERLERRESLPRERRLYLLHRKHSADVVAHEQPLGP
Ga0066679_1093676623300005176SoilMPARQLWAFLSENDVRELIAQIAAREPGLAVSQGRYLRGDPRGLLGEPAALERRESLPGERRIYLLHRKYSADIVAHLQPAGPF
Ga0066690_1019111313300005177SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSADIVTHLQPAGPFAGW
Ga0066688_1003662013300005178SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADIVTHLQPAGPFAGWSQIDEEKTDCVVVRLKDSP
Ga0066688_1009650323300005178SoilMAARQLWLFLTAKDVESLLAVLDAREPGLIWSQGRYLRGDPSDLLAGPSKLERRESLPAEMRIYLLHRKHSAEVVAHPQPAGPFSGWAQIDEERTDALVLRVPEAHPGEIQPARLYA
Ga0066688_1030096123300005178SoilMAARQLWFFFTARDVEDLLAKLELREAGLVTSYGRYLRGESRDLLLSPEKLERRESLPRERRLYLLHRKHSADVVAHEQPLGPFAGWRQIDEERTDALVLALPEERPGEIEPARLYAHTSYWRAGKKIRKR
Ga0066684_1006741813300005179SoilMPARQLWAFFTERDVEELIAKIAAREPGLAVSQGRYLRGNPQDLLDGPEKLERREALPGERRIYLLHRKHCSEIVTH
Ga0066671_1000542713300005184SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSADIVTH
Ga0066675_1113879823300005187SoilMAARQLWFFFTARDIESLLAELERRERGFVVSQGRYLRGNAQDLLAAPERLERRDSLPRERRIYLLHRKHSADVVAHAQPRGPFAGWQQIDEERTDALVLAVPEERPDEIQPARLY
Ga0066388_10841103013300005332Tropical Forest SoilMAARQLWLFLTDADVRSVLGMLEQREPGLVVSQGRYLRGDPADLLTAPGKLERRESLPAETRLYLFHRKHSSEVVAHPQPAGPFAGWAQIDEERTDALVLRIPEERPDEIQPARLYAHTSYWRGGEKTRKRPVFALWANQTLRWMAA
Ga0066686_1000623753300005446SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSA
Ga0066689_1001565013300005447SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADI
Ga0066687_1024943513300005454SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSADI
Ga0070741_1132160713300005529Surface SoilMPRQAFLFLTDDDVAALLADLEKREPGLVVSWGRYLRGDPADLLLDPARLERRESLPSERRAYLFHRKHCGEIVAHPQPSGPFAGWSQIDEERTEALVLRLPSRGPGELWPSRLYAHTTFWRAERKTKKRPMFAIWVNQTLRWIKSRYPATSASFMRIGPDALAKAKSGTLRLT
Ga0066697_1004033313300005540SoilMAARQLWLFLTEPDVRSVLTMLEEREPGLVWSQGRYLCGDPADLLADPAKLERRESLPGERRLYLLHRKHSAEVLAHPQPAGPFAGWAQIDEER
Ga0070696_10198078713300005546Corn, Switchgrass And Miscanthus RhizosphereMPARQLWAFLSENDLRELIAQIAAREPGLAVSQGRYLRGDPRALVGNPAALERRESLPGERRIYLFHGKYSADIVAHLQPAGPFAGWSQIDEEKTDCIVVRLKEAPAGQLEPARIYAHVT
Ga0070693_10026412223300005547Corn, Switchgrass And Miscanthus RhizosphereMVRPMPARQLWAFLSEADVRDLIRRIGEREPGLAVSGGRYFRGDPMALLRSPESLERRESLPGERRIYLFHRKHSTDIVTHPQPAGPFAGW
Ga0066701_1005909623300005552SoilMPARQLWAFLSENDLRELIGQIAAREPGLAVSQGRYLRGDPQALLGDPAALERRESLPGERRIYLLHRKYSADIV
Ga0066701_1062061123300005552SoilMAARQLWIFLTDADVDLLLAMLQAHEPGLSWSAGRYLQGDPRKLLSNPVELERRESLPGERRLYLLHQKHSAEVVAHAQPAGPFAGWAQIDEERTDAIVLRIPTAGGGRIQPARLYA
Ga0066661_1031782813300005554SoilMAARQLWLFLTAKDVESLLAVLDAREQGLIWSQGRYLRGDPSDLLAGPSKLERRESLPAEMRIYLLHRRHSAEVVAHPQPAGPFSGWAQIDEERTDALVLRVPEAHPGEIQPARLYAHTSYWRGGEKIRKRPV
Ga0066698_1024004523300005558SoilMAARQLWLFLTEPDVRSVLTMLEEREPGLVWSQGRYLCGDPADLLAEPAKLERRESLPGERRLYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTDALVLRIPEGRPDEIQPARLYAHTSYWRAGEKIRKRPVFA
Ga0066700_1098448823300005559SoilMAARQLWLFLTAKDVESLLAVLDAREPGLIWSQGRYLRGDPSDLLVAPSKLERRESLPAEMRIYLLHRKHSAEVVAHPQPAGPFSGWAQIDEERTDALVLR
Ga0066670_1008216713300005560SoilMVRAMPARQLWAFLTERDVQELIDQIAAREAGLAVSGGRYLRGDPQALVRDPRSLERRESLPGERRLYLLHAKYSGDIVAHLQPAGPFAGWSQIDEEKTDCIV
Ga0066699_1032281923300005561SoilMAARQLWLFLTAKDVESLLAVLDAREPGLIWSQGRYLRGDPSDLLAGPSKLERRESLPAEMRIYLLHRRHSAEVVAHPQPAGPFSGWAQIDEERTDALVLRVPEAHPGEIQPAR
Ga0066703_1027341523300005568SoilMAARQLWIFLTDADVGSLLGLLESREPGLVSSAGRYLRGDPRKLLDDPASLERRESLPGESRIYLLHRKHSSDVVAHVQPAGPFAEWAQIDEERTDAMILRLPSPGPGTIQPAR
Ga0066703_1074798123300005568SoilMAARQLWFFFTARDVEDLLAKLESHEAGLVTSYGRYLRGESRDLLLSPEKLERRESLPRERRLYLLHRKHSADVVAHEQPLGPFAGWRQIDEERTDALVLALPEERPGEI
Ga0066703_1084448913300005568SoilMVRAMPARQLWAFLTDEDLRALIERIGAREPGLTVSQGRYLRGDPHALLQDPTSLERRESLPGERRIYLLHRKHCAEIVTHLQPSGPFEGWSQIDEERTD
Ga0066705_1004685113300005569SoilMAARQLWFFFTARDIESLLAELERREPGFVVSQGRYLRGNAQDLLAAPERLERRDSLPRERRIYLLHRKHSADVVAHAQPRGPFAGWQQIDEE
Ga0066705_1032345113300005569SoilMAARQLWAFLTDRDVEELIAKIAAREPGLVVSQGRYLRGDPRMLLEDPAKLERRESLPGERRIYLLHRKHCSEIVAHLQPAGPFAGWAQIDEDRTDCLVLRL
Ga0066705_1082981223300005569SoilMPARQLWAFFTERDVEELIAKIAAREPGLAVSQGRYLRGNPQDLLDGPEKLERREALPGERRIYLLHRKHCSEIVTHLQPRGPFAGWSQIDEERTDCM
Ga0068856_10124118913300005614Corn RhizosphereMPARQLWMFLTERDVEELLASIAGREEGLVVSAGRYFQGEAQDLLRAPEKLQRRESLPAEKRYYLFH
Ga0075282_106861123300005896Rice Paddy SoilMRWPSSDAFCAMVRPMPARQLWAFLSERDVEELLAQIAAREPGLLISQGRYLRGDARALLDDPSALERRESVSGERRTYLFHRKHSAEIVTHLQPE
Ga0066651_1013393223300006031SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSADIVTHLQPAGPFAGWTQIDEEKTDCIVIRL
Ga0070716_10140089313300006173Corn, Switchgrass And Miscanthus RhizosphereMAARQLWAFLTGKDVDELIAKIAAREPGLVVSQGRYLRGDPRMLLEDPSKLERRESLPGEKRVYLLHRKHSADIVTH
Ga0070716_10176643013300006173Corn, Switchgrass And Miscanthus RhizosphereMPARQIWIFLVERDVSSLIEDLQAREPGLAASWGRYLQGDPRDLLANPSLLARRESLPGERRLYLLHRKHSSDVIAHQQPAGPFAGWMQIDEERTDALVLRIPDARGADIQPARLYAHTTYWRGAEKFRKRPMFSIWASQT
Ga0066659_1171911423300006797SoilMAARQLWLFFTGRDVEALLAKLESREPGLVASQGRYLRGDPRDLLLAPERLERKESLPRERRLYLLHRKHSADVVAHEQPMGPFAGWRQIDEERTDALVLAVPEERPSEIEPARLYAHTSYWREGKKIRKRPVFAVWAN
Ga0066660_1010364713300006800SoilMAARQLWFFFTARDVEDLLAKLELREAGLVTSYGRYLRGEPRDLLLSPEKLERRESLPRERRLYLLHRKHSADVVAHEQPLWPVAGWRQIDEERTDALVLALPEERPGEIEPARLYAHTSYWRAGKKIRKRPVF
Ga0066660_1165007913300006800SoilMAARQLWIFLTDADVGSLLGLLESREPGLVSSAGRYLRGDPRKLLDDPASLERRESLPGESRIYLLHRKHSSDVV
Ga0075426_1146322123300006903Populus RhizosphereMAARQLWMFLTGEDVRSLLAMLEAHEPGLISSQGRYLRGDPADLLAAPDRLERRESLPSERRLYLFHRKHSADVVAHAQPAGPFAGWSQIDEERTDALVLRLPEERPDEIQPSRLYAHTSYWRGGEKVRKR
Ga0075424_10111129023300006904Populus RhizosphereMAARQLWLFLTSEDVESLLTTLDAREPGLIWSPGRYLRGDPSDLLANPARLERRESLPAERRIYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTD
Ga0075436_10057028713300006914Populus RhizosphereMAARQLWMFLTGEDVRSLLAMLEAHEPGLISSQGRYLRGDPADLLAAPDRLERRESLPSERRLYLFHRKHSADVVAHAQPAGPFAGWSQIDEERTDALVLRLPEERPDEIQPSRLYAHTSYWRGGEKVRKRPVFAIWANQTLRWL
Ga0099793_1013785223300007258Vadose Zone SoilMVRAMPARQLWVFLTDADLRELIERIGAREPGLAVSQGRYLRGDPQALLQDPTSLERRESLPGERRIYLLHRKHCAEIVTHLQPSGPFSGWSQIDEERSDCIVIRGKDAPAGELEPARVYAHVTFW
Ga0099794_1016181213300007265Vadose Zone SoilMVRAMPARQLWTFLTDADLEELIDRIGAREPGLAVSQGRYLRGDPQALLRDPSSLERRESLPGERRIYLLHRKHCAEIVAHLQPSGPFAGWSQIDEERTD
Ga0066710_10231144723300009012Grasslands SoilMAARQLWVFLTDADVRQLLEGVERRDPGLVASGGRYLKGEARDLLDDPSRLERRESLPGERRLYLFHRKHSTDLIVHPQPAGPFRGWSQIDEERSDCLVLLRKDSPEGELQPARLYGYVTYWRAA
Ga0066709_10012754513300009137Grasslands SoilMVGAMPARQLWAFLTERDAQELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALDRRDSLPGERRLYLLHAKYSADIVTHLQP
Ga0066709_10148083023300009137Grasslands SoilMAARLIWAFLTDKDVRDLLEKLEQREPGMVCSGGRYLRGDAQDLVRDPTKLERRESLPGERRLYLFHRKHSAEIVTHDQPAGPFSGWSQIDEE
Ga0099792_1000892243300009143Vadose Zone SoilMVRAMPARQLWAFLTDADLGELIERIGAREPGLAVSQGRYLRGDPEALLRDPTSLERRESLPGERRIYLLHRKHCA
Ga0099792_1080560323300009143Vadose Zone SoilMPARQLWAFLSEADLRELIGRIGGREPGLAVSQGRYLRGDPQALLHDPAALERRESLPGERRTYLLHRKHSAEIVTHLQPAGPFAGWSQID
Ga0075423_1210554813300009162Populus RhizosphereMAARQLWIFLTSHDVQTLLSTLEAREPGLICSQGRYLRGEAKDLLGAPEKLERRDSLPGEKRLYLLHRKHSADVIAHLQPAGPFAGWAQIDEERTDALVLRIPDETPGEIQPARLYAHTSYWRGAEKIRKRPVFSL
Ga0099796_1014642113300010159Vadose Zone SoilMAARQLWLFLTEKDLDSLLAMLDAREPGLIWSQGRYLRGAATDLLEEPSRLERRESLPAERRIYLLHRKHSADVVAHPQPAGPFAGWAQIDEERTDCI
Ga0134063_1067961023300010335Grasslands SoilMAARQLWLFLTEPDVRSVLTMLEEREPGLVWSQGRYLCGDPADLLAEPAKLERRESLPGERRLYLLHRKHSAEVLAHPQPAGPFAGWAQIDEERTDALVLRIPEGRPDEIQPA
Ga0137393_1057510123300011271Vadose Zone SoilMAARQLWLFLTDLDVRSLLAMLEAREPGLIWSQGRYLRGDPPDLLAAPARLERRESLPAERRLYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTDALVLRIPEERPDEIQPARLYAHTSYWRGGEKIRKRPVFSVWANQTLRWLGTQ
Ga0137382_1029247613300012200Vadose Zone SoilMPSRQLWAFLTDADIHELIGKIAARGPGLAVSEGRYLRGDPRFLLEDPSLLDHRESLPSERRTYLLHRKHSADIVTHLQPEGPFKGWSQIDEER
Ga0137399_1057164013300012203Vadose Zone SoilMVRAMPARQLWVFLTDADLRELIERIGAREPGLAVSQGRYLRGDPQALLQDPTSLERRESLPGERRIYLLHRKHCAEIVTHLQPSG
Ga0137360_1157390823300012361Vadose Zone SoilMAARQLWLFLTDLDVRSLLAMLEAREPGLIWSQGRYVRGDPADLLAAPAKLERRDSLPGERRLYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTDALVLRIPEERPDEIQPVRLYAHTSYWRAGEKIRKRPVFSLWA
Ga0137361_1037328523300012362Vadose Zone SoilMAARQLWLFLTGEDVRWLLDTLEAHEPGLIWSQGRYLRGDAPDLLAAPAQLERRESLPGERRLYLLHRRYSTEVVAHLQPAGPFAGWSQIDEERTDALVLRIPEERPDEIQPARLYAHTSYWRTGEKIRKK
Ga0137361_1063808823300012362Vadose Zone SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADIIT
Ga0150984_11906855333300012469Avena Fatua RhizosphereMPARQIWLFLLDGDVSSISDDLARREPGLVPSWGRYLKGEPQDLLTDPSRLERRESLPGERRLYLLHRKHSLDIVTHLQPKGPFAGWMQIDEERTDALVLRIPDRKGADVSPSRLYAHATFWRGAVKA
Ga0137394_1016135623300012922Vadose Zone SoilMVRAMPARQLWTFLTDADLEELIDRIGAREPGLAVSQGRYLRGDPQALLRDPSSLERRESLPGERRIYLLHRK
Ga0137359_1042039223300012923Vadose Zone SoilMVRAMPARQLWAFLTDADLGELIERIGAREPGLAVSRGRYLRGDPQALLGDPISLERRESLPGERRTYLLHRKHCAEIVTHLQPSGPFAGWSQIDEERTDCIVIRRKDAPAGELEPARVYAHVTFWRAADK
Ga0137419_1038648713300012925Vadose Zone SoilMVRAMPARQLWAFLTDADLGELIERIGAREPGLAVSQGRYLRGDPEALLRDPTSLERRESLPGERRIYLLHRKHCAEIVTHLQPSGPF
Ga0137419_1069432523300012925Vadose Zone SoilMAARQLWLFLTDQDVQSLLAMLEAREPGLIWSQGRYLRGDPPDLVAAPSKLERRESLPGERRLYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTDALVLRIPEERPDEIQPARLYAHTSYW
Ga0137407_1130087613300012930Vadose Zone SoilMAARQLWLFLTSEDVESLVTTLDVREPGLIRSQGRYLRGDPADLLAGPARLERRESLPAERRIYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERTDALVLRLPEGLP
Ga0137410_1025143723300012944Vadose Zone SoilMVRAMPARQLWAFLTDADLGELIDRIGAREPGLAVSQGRYLRGDPEALLQDPISLERRESLPGERRIYLLHRKHCAEIVTHLQPSGPFAGWSQIDEERTDCIVIRRK
Ga0134087_1066427523300012977Grasslands SoilMAARQLWAFLTDRDVEELIAKIAAREPGLVVSQGRYLRGDPRMLLEDPAKLERRESLPGERRIYLLHRKHCSEIVAHVQPAGPFEGWAQIDEDRT
Ga0134081_1013482223300014150Grasslands SoilMVRAMPARQLWAFLTERDVQELIDQIAAREAGLAVSGGRYLRGDPQALVRDPRSLERRESLPGERRLYLLHAKYSGDIVAHLQPAGPFAGWS
Ga0134079_1028527523300014166Grasslands SoilMPARQIWLFLLERDVSALIDDLQGREPGLVTSWGRYLQGNPRDLLDDPSRLARRESLPGERRLYLLHRKHSSEVVTHLQPLGPFAGWMQIDEERTDALVLKIPDAGEGEIQPARLYAHTTYWRGAEKFRKRPMFSIWASQMLKWL
Ga0167647_108369123300015199Glacier Forefield SoilMVRAMPARQLWAFLSDRDVEDLIAKIAAREPGLSVSKGRYLRGDPRALLENPEALERRESLPNERRIYLLHRKYSAEIVTHLMPAGPFAGWSQIDEERTDCLVLALRN
Ga0137418_1066504513300015241Vadose Zone SoilMVRAMPARQLWAFLTDADLGELIERIGAREPGLAVSQGRYLRGDPEALLRDPTSLERRESLPGERRIYLLHRKHCAEIVTHLQPSGPFS
Ga0137403_1090952313300015264Vadose Zone SoilMVRRMPARQIQAFLTDRDVAELIGKIAAREPGLVWSQGRYLRGDPQALLKDPASLERRESLPGESRIYLLHKKHCTEIVTH
Ga0066667_1004909133300018433Grasslands SoilMVRAMPARQLWAFLTERDVRELIDQIGAREPGLAVSQGRYLRGEPQALLRDPRALERRDSLPGERRLYLLHAKYSADIVTHLQPAGPFAGWTQIDEEKTDCIVIRLKQAPE
Ga0066662_1234909313300018468Grasslands SoilMVRPMPARQLWAFLTARDVEDLLAEIAKREPGLVVSSGRYFRGEPADLLERPEALERRQSLPGEQRVYLFHRKHSTDVVTHLQPEGPFAGWSQIDEERTDC
Ga0213851_107380413300021860WatershedsVTVPARAFCAMVRAMPARQLWAFLTQRDTEELLAKIAAREPGLMVSQGRYLRGDPRMLLEDPSVLERRESLPYERRIYLLHRKHCAEIVAHLQPGGPFAGWSQIDEERTDCLVLRLKDSPPGEL
Ga0209802_112654523300026328SoilMAARQLWLFLTAKDVESLLAVLDAREPGLIWSQGRYLRGDPSDLLAGPSKLERRESLPAEMRIYLLHRKHSAEVVAHPQPAGPFSGWAQIDEERT
Ga0209802_113313223300026328SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADIVTHLQPAGPFAGWSQIDEEKTDCVVVRLKDSPAGELEPARIYAYVT
Ga0209473_109399923300026330SoilMPARQIWLFLLERDVSALVEDLEGREPGLVASWGRYLQGDPRDLLEDPSRLARRESLPTERRLYLLHRKHSSDVVTHRQPAGPFAGWMQIDEERTDALVLRIPDAREGEIQPARLYAHTTYWRGAEKFRKRPMFSIWASQTLRWLVGRH
Ga0209803_112441713300026332SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYMRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADIITHLQPAGPFAGWSQIDEEKTDCVVVRLKDSPAGDLEPARIYAHVTWWRAAEKARKRP
Ga0209803_122754913300026332SoilMPARQLWAFLSENDLRELIGQIAAREPGLAVTQGRYLRGDPRALLGDPAALERRESLPGERRIYLLHRKYSADIVAHLQPAGPFAGWSQID
Ga0209804_120883423300026335SoilVGSLLGLLESREPGLVSSAGRYLRGDPRKLRDDPAALERRESLPGESRIYLLHRKHSSDVVAHVQPAGPFAEWAQIDEERTDAMILRLPSPGPGTIQPARLYAHTSYWRGGEKIRKKPMFAVWANQTLRWLLSRF
Ga0209378_106017313300026528SoilMPARQLWAFLSENDLRELIGQIAAREPGLAVTQGRYLRGDPRALLGDPAALERRESLPGERRIYLLHRKYSADIVAHLQPAGPFAGW
Ga0209806_111883723300026529SoilMPARQLWAFLTENDLRELIGQIAAREPGLTVSQGRYVRGDPRALLGDPASLERRESLPGERRIYLLHRKYSADIVTHLQPAGPF
Ga0209805_113582513300026542SoilMAARQLWLFLTAKDVESLLAVLDAREPGLIWSQGRYLRGDPSDLLAGPSKLERRESLPAEMRIYLLHRKHSAEVVAHPQPAGPFSGWAQIDEERTDALVLRVPEAHPGEIQPARLYAHTSYWRGGEKIR
Ga0209805_130551823300026542SoilMAARQLWIFLTDADVGSLLGLLESREPGLVSSAGRYLRGDPRKLLDDPAALERRESLPGESRIYLLHRKHSSDVVAHVQPAGPFAE
Ga0209805_135049713300026542SoilMVRAMPARQLWAFLTERDVQELIGQIAAREPGLAVSQGRYLRGDPAALLRDPRALERRDSLPGERRLYLLHAKY
Ga0209577_1003220413300026552SoilMAARQLWIFLTDADVGSLLGLLESREPGLVSSAGRYLRGDPRKLLDDPASLERRESLPGESRIYLLHRKHSSD
Ga0179587_1115972423300026557Vadose Zone SoilMPARQLWAFLTDADVRELIGKIGGREPGLAVSQGRYLRGDPQALLVDPAALERRESLPGERRTYLLHRKHSAEIVTHLQPAGPFAGWSQIDEE
Ga0209588_126037323300027671Vadose Zone SoilMAARQLWLFLTEKDLDSLLAMLDAREPGLIWSQGRYLRGAATDLLEEPSRLERCESLPAERRIYLLHRKHSADVVAHPQPAGPFAGWAQIDEERTDAL
Ga0209701_1074119723300027862Vadose Zone SoilMAARQLWLFLTDLDVRSLLAMLEAREPGLIWSQGRYVRGDPADLLAAPAKLERRDSLPGERRLYLLHRKHSAEVVAHPQPAGPFAGWAQIDEERT
Ga0209488_1040734713300027903Vadose Zone SoilMAARQLWMFLTDADVRWLLGMLETREPGLIWSQGRYLRGDPPDLLAAPAKLERRESLPAERRLYLLHRKHSAEVVAHPQPAGPFEGWAQIDEERTDALVLRIPTEQPEEIQPARLYAHTSYWRGGE
Ga0209488_1119006623300027903Vadose Zone SoilMPARQLWAFLSENDLRELIGQIAAREPGLAVSQGRYLRGDPQALLGDPAALERRESLPGERRIYLLHRKYSADIVAHLQPAGPFAGWSQIDEEKTDCIVVRLKETPAGQLEPAR
Ga0307469_1172345523300031720Hardwood Forest SoilMAARQLWAFLTEKDVEELIAKIAAREQGLVVSQGRYLRGDPRMLLEDPGKLERRESLPGEKRIYLLHRKHSSDVVAHVQPAGPFAGWAQIDEDRTDCLVLRLKETPKGEL
Ga0307468_10034266113300031740Hardwood Forest SoilMPARQVWAFLTAADVRDLIEKIDPLDPGLVASQGRYLRGDPQLLVKDPAALERRESLPNQRRTYLFHRRRSADIVTHLQPAGPFEGWSQIDEE
Ga0318566_1057003423300031779SoilMPARQLWAFLTDRDIDELVAAIAAREPGLSVSRGRYFKGDPRALIEDPDKLERRESLPQERRIYLFHRKHSSAVVTHEQPAGPFAGWSQIDEERSDCIVLRIKELGPGMLEPVTIYGHVTFW
Ga0307473_1075213213300031820Hardwood Forest SoilMPARQLWAFLTDEDVRSLIEQIGAREPGLAVSQGRYLRGDPQALLHDPGALERRESLPGERRWYLLHRKHSADIV
Ga0307473_1111073923300031820Hardwood Forest SoilMPARQLWAFLTDRDVDDLLARIAAREPGLSVSGGRYLRGDPLALLEAPQTLERRESVAGERRIYLLHRKHCADIVTHLQPEGPFAGWSQID
Ga0315287_1181747323300032397SedimentMFLTDDDVAALVRRLEARDPGVRASSGRYLRGDPRALLDDPSALERREAVVGERRLYLFHRAHSTEVVVHAQPAGPFAGWSQIDEERSDCLVL
Ga0335085_1210656013300032770SoilMVRPMPARQLWAFLTDADLRGLIDALAAREPGLIVSQGRYLRGDPRALLEDPAALERRESLPGERRLYLLHRKHCQEVVAHLQPQGPFAGWSQIDE
Ga0335077_1070210313300033158SoilMPARQLWAFFTQRDVEELIAAIAAREEGLMVSQGRYLRGDPQDLLRAPEALERREALPGEQRLYLLHRKHCADIVAHL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.