Metagenome Family F099709

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099709
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	40 residues
Representative Sequence	MALLVAEREIEMNSRGGGVGIVGVIIIVLVILWLVHVI
Number of Associated Samples	74
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.00 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	83.50 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.456 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (54.369 % of family members)
Environment Ontology (ENVO)	Unclassified (46.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.97% β-sheet: 0.00% Coil/Unstructured: 53.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13545	HTH_Crp_2	8.74
PF11706	zf-CGNR	3.88
PF04226	Transgly_assoc	2.91
PF04020	Phage_holin_4_2	0.97
PF12833	HTH_18	0.97
PF02416	TatA_B_E	0.97
PF07690	MFS_1	0.97
PF00291	PALP	0.97
PF13374	TPR_10	0.97
PF09851	SHOCT	0.97
PF13683	rve_3	0.97
PF13424	TPR_12	0.97
PF13560	HTH_31	0.97
PF01028	Topoisom_I	0.97
PF13546	DDE_5	0.97
PF13436	Gly-zipper_OmpA	0.97
PF01850	PIN	0.97
PF00211	Guanylate_cyc	0.97
PF02826	2-Hacid_dh_C	0.97
PF00486	Trans_reg_C	0.97
PF13248	zf-ribbon_3	0.97
PF13488	Gly-zipper_Omp	0.97
PF00581	Rhodanese	0.97
PF04101	Glyco_tran_28_C	0.97
PF11752	DUF3309	0.97
PF12079	DUF3558	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.91
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.97
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.97
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.97
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
All Organisms	root	All Organisms	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
cellular organisms	root	All Organisms → cellular organisms	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	23.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	8.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.88 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1.94 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.97 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1.94 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1.94 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1.94 %
Clostridium sp. DJ247	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. DJ247	0.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_67678_len_578_cov_17_773355	Not Available	628	Open in IMG/M
2088090004\|P1_DRAFT_NODE_990_len_758_cov_13_062005	Not Available	808	Open in IMG/M
2088090008\|P3_DRAFT_NODE_28714_len_633_cov_11_990521	Not Available	683	Open in IMG/M
2124908028\|beta3_all_NODE_57981_len_749_cov_12_650200	Not Available	799	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig81099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2275	Open in IMG/M
2124908039\|B3_v_NODE_60265_len_12179_cov_16_667707	All Organisms → cellular organisms → Bacteria	12229	Open in IMG/M
2140918006\|ConsensusfromContig74253	Not Available	695	Open in IMG/M
2140918008\|ConsensusfromContig197457	Not Available	914	Open in IMG/M
3300001394\|JGI20191J14862_1009601	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300001410\|JGI20179J14886_1016327	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300001870\|JGI24129J20441_1038936	Not Available	1137	Open in IMG/M
3300002066\|JGIcombinedJ21911_10063049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1206	Open in IMG/M
3300002066\|JGIcombinedJ21911_10079595	Not Available	1022	Open in IMG/M
3300002068\|JGIcombinedJ21913_10151725	Not Available	823	Open in IMG/M
3300002068\|JGIcombinedJ21913_10209704	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300002068\|JGIcombinedJ21913_10214816	Not Available	642	Open in IMG/M
3300002069\|JGIcombinedJ21912_10028079	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300002069\|JGIcombinedJ21912_10134594	Not Available	896	Open in IMG/M
3300002069\|JGIcombinedJ21912_10285887	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300002071\|JGIcombinedJ21915_10049385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1840	Open in IMG/M
3300002071\|JGIcombinedJ21915_10087772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. DJ247	1269	Open in IMG/M
3300002071\|JGIcombinedJ21915_10116346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1046	Open in IMG/M
3300002549\|JGI24130J36418_10025722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1757	Open in IMG/M
3300002550\|JGI24131J36419_10080704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	840	Open in IMG/M
3300002563\|JGI24138J36424_10037781	Not Available	1404	Open in IMG/M
3300002564\|JGI24134J36421_10075341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300002569\|JGI24136J36422_10020614	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300002569\|JGI24136J36422_10030244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1674	Open in IMG/M
3300005468\|Ga0070707_101060773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	776	Open in IMG/M
3300005938\|Ga0066795_10000787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6597	Open in IMG/M
3300005938\|Ga0066795_10035851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1453	Open in IMG/M
3300005938\|Ga0066795_10227069	Not Available	554	Open in IMG/M
3300005947\|Ga0066794_10221977	Not Available	567	Open in IMG/M
3300006049\|Ga0075417_10184513	All Organisms → cellular organisms → Bacteria → Terrabacteria group	983	Open in IMG/M
3300006173\|Ga0070716_101659532	Not Available	526	Open in IMG/M
3300006640\|Ga0075527_10013191	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300006640\|Ga0075527_10219115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	550	Open in IMG/M
3300006642\|Ga0075521_10167930	Not Available	1034	Open in IMG/M
3300006795\|Ga0075520_1044051	Not Available	2167	Open in IMG/M
3300006795\|Ga0075520_1116659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1195	Open in IMG/M
3300006795\|Ga0075520_1316914	Not Available	638	Open in IMG/M
3300006864\|Ga0066797_1084571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1111	Open in IMG/M
3300006864\|Ga0066797_1269843	Not Available	593	Open in IMG/M
3300006949\|Ga0075528_10017789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1755	Open in IMG/M
3300006949\|Ga0075528_10204045	Not Available	536	Open in IMG/M
3300006950\|Ga0075524_10437638	Not Available	578	Open in IMG/M
3300011999\|Ga0120148_1045896	Not Available	898	Open in IMG/M
3300013503\|Ga0120127_10022589	Not Available	1130	Open in IMG/M
3300013758\|Ga0120147_1017502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1421	Open in IMG/M
3300013766\|Ga0120181_1099067	Not Available	638	Open in IMG/M
3300014490\|Ga0182010_10506630	Not Available	668	Open in IMG/M
3300014490\|Ga0182010_10708350	Not Available	567	Open in IMG/M
3300014494\|Ga0182017_10653740	Not Available	638	Open in IMG/M
3300014498\|Ga0182019_10141897	Not Available	1514	Open in IMG/M
3300014839\|Ga0182027_10725616	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300014839\|Ga0182027_12373756	Not Available	500	Open in IMG/M
3300018027\|Ga0184605_10096768	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300018027\|Ga0184605_10194853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	919	Open in IMG/M
3300018028\|Ga0184608_10303839	All Organisms → cellular organisms → Bacteria → Terrabacteria group	701	Open in IMG/M
3300018061\|Ga0184619_10026950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2397	Open in IMG/M
3300018061\|Ga0184619_10109077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1248	Open in IMG/M
3300023311\|Ga0256681_10327278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1809	Open in IMG/M
3300025443\|Ga0208081_1008383	All Organisms → cellular organisms → Bacteria → Proteobacteria	2003	Open in IMG/M
3300025443\|Ga0208081_1034108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	881	Open in IMG/M
3300025457\|Ga0208850_1049034	Not Available	702	Open in IMG/M
3300025484\|Ga0208587_1103958	Not Available	548	Open in IMG/M
3300025495\|Ga0207932_1054885	Not Available	886	Open in IMG/M
3300025533\|Ga0208584_1066033	Not Available	910	Open in IMG/M
3300025533\|Ga0208584_1091888	Not Available	735	Open in IMG/M
3300025548\|Ga0208716_1027032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1334	Open in IMG/M
3300025553\|Ga0208080_1069680	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300025650\|Ga0209385_1028916	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300025650\|Ga0209385_1094980	Not Available	977	Open in IMG/M
3300025692\|Ga0209744_1163470	Not Available	707	Open in IMG/M
3300025739\|Ga0209745_1176742	Not Available	649	Open in IMG/M
3300025739\|Ga0209745_1206507	Not Available	582	Open in IMG/M
3300025764\|Ga0209539_1107379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1121	Open in IMG/M
3300025836\|Ga0209748_1073046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1370	Open in IMG/M
3300025846\|Ga0209538_1083351	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300025846\|Ga0209538_1202426	Not Available	739	Open in IMG/M
3300025854\|Ga0209176_10052799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	905	Open in IMG/M
3300025857\|Ga0209014_10191380	All Organisms → cellular organisms → Bacteria → Terrabacteria group	715	Open in IMG/M
3300025864\|Ga0209429_10229926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	740	Open in IMG/M
3300025865\|Ga0209226_10089553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1404	Open in IMG/M
3300025865\|Ga0209226_10307945	Not Available	664	Open in IMG/M
3300025878\|Ga0209584_10009717	Not Available	3163	Open in IMG/M
3300025888\|Ga0209540_10082662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1973	Open in IMG/M
3300025888\|Ga0209540_10657164	Not Available	518	Open in IMG/M
3300025891\|Ga0209585_10366418	Not Available	585	Open in IMG/M
3300025939\|Ga0207665_11124134	Not Available	626	Open in IMG/M
3300026271\|Ga0209880_1010990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2387	Open in IMG/M
3300027873\|Ga0209814_10039877	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300028784\|Ga0307282_10033282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	2238	Open in IMG/M
3300028799\|Ga0307284_10381645	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031232\|Ga0302323_101970845	Not Available	663	Open in IMG/M
3300031902\|Ga0302322_102152363	Not Available	686	Open in IMG/M
3300032160\|Ga0311301_11418421	Not Available	864	Open in IMG/M
3300034070\|Ga0334822_065692	Not Available	777	Open in IMG/M
3300034170\|Ga0370487_0174034	Not Available	710	Open in IMG/M
3300034195\|Ga0370501_0071841	Not Available	1133	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.26%
Aquatic	Environmental → Aquatic	6.80%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.35%
Sediment	Environmental → Aquatic → Sediment	4.85%
Peat	Environmental → Terrestrial → Peat	2.91%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Loam	Environmental → Terrestrial → Soil → Loam	2.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.91%
Lake	Environmental → Aquatic → Freshwater → Lake	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	66.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	54.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	7.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.97%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001394	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012	Environmental	Open in IMG/M
3300001410	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002069	Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00856950	2088090004	Soil	MAAKVIGREIEMNSRSGGIGIVGVIVIVLVILWLVGVIKL
P1_DRAFT_00235230	2088090004	Soil	MRRPNGRAVTEREIEMNSRTGGVGIVGVIIIVLVVLWLLKVI
P3_DRAFT_00671170	2088090008	Soil	MAVQVIGREIKMNSRSGGIGIVGVIVIILVILWLVGVIKL
beta3_all_00993270	2124908028	Soil	VQPRSISRKLALLVAEREIEMNSRGGGVGIVGVIIIVLVILWLVHVI
Perma_A_C_04308630	2124908032	Soil	RLNGLTGQEIEMNYRSGGVGIVGVIVIVLVILWLVGVIKL
B3_v_00110250	2124908039	Soil	VQPRSISRKLASLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI
P1_C_00364270	2140918006	Soil	MAHLLVTRSEIDMNYRSGGIGIVGVIVIVLVILFLVGVIKL
Bog_all_C_02770030	2140918008	Soil	VQPRSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI
JGI20191J14862_10096013	3300001394	Arctic Peat Soil	MVGLVIEQEIDMNYRSGGIGIVGVIVIVVVILFXVGVIKL*
JGI20179J14886_10163273	3300001410	Arctic Peat Soil	VAFLATEREIEMNYRSGGIGIVGVIVIVVVILFLV
JGI24129J20441_10389363	3300001870	Arctic Peat Soil	MALLVAEREIEMNSRGGGVGIVGVIIIVLVILWLVHVI*
JGIcombinedJ21911_100630492	3300002066	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLAHVI*
JGIcombinedJ21911_100795951	3300002066	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMNSRGGGVGIVGVIIIVLVIL
JGIcombinedJ21913_101517251	3300002068	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMYSRGGGIGIVGVIIIVLVILWLIHVI*
JGIcombinedJ21913_102097043	3300002068	Arctic Peat Soil	VAFLATEREIEMNYRSGGIGIVGVIVIVVVILFLVGV
JGIcombinedJ21913_102148161	3300002068	Arctic Peat Soil	MRRPNGRAATEREIEMNSRTGGIGIVGVIIIVLVVLWLLKVI*
JGIcombinedJ21912_100280792	3300002069	Arctic Peat Soil	VTNLETKMNYRSGGIGIVGVIVIVIVVLFLLGRL*
JGIcombinedJ21912_101345941	3300002069	Arctic Peat Soil	MAVQVIGREIMNSRSGGIGIVGVIVIVLVILWLVGVIKL*
JGIcombinedJ21912_102858872	3300002069	Arctic Peat Soil	AFLATEREIEMNYRSGGVGIVGVIIIVLVILWLVHVI*
JGIcombinedJ21915_100493851	3300002071	Arctic Peat Soil	MASLVAEREIKMYSRGGGIGIVGVIIIVLVILWLVHVI*
JGIcombinedJ21915_100877723	3300002071	Arctic Peat Soil	MALLVAEREIEMNYRSGGVGIVGVIVIVLVILWLVHVI*
JGIcombinedJ21915_101163462	3300002071	Arctic Peat Soil	AVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLAHVI*
JGI24130J36418_100257221	3300002549	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIXLVILWLVGVIKL*
JGI24131J36419_100807042	3300002550	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLVGVIKL*
JGI24138J36424_100377813	3300002563	Arctic Peat Soil	MRRPNGRAATEGEIEMNSRTGGVGIVGVIIIVLVILWLLKVI*
JGI24134J36421_100753411	3300002564	Arctic Peat Soil	MVGLVIEQEIDMNYRSGGIGIVGVIFIVVVILFLVGVIKL*
JGI24136J36422_100206142	3300002569	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIXGVIVIVLVILWLVGVIKL*
JGI24136J36422_100302442	3300002569	Arctic Peat Soil	MRRPNGRAVTEREIEMNSRTGGVGIVGVIIIVLVVLWLLKVI*
Ga0070707_1010607731	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALLASQREIEMYRSGGIGIVGVIVIVLVILWLVGVIKL*
Ga0066795_100007878	3300005938	Soil	MALLVAEWEIEMNSRGGGVGIVGVIIIVLVILWLVHVI*
Ga0066795_100358512	3300005938	Soil	MAVQVIGREIKMNSRSGGIGIVGVIIIVLVILWLVHVI*
Ga0066795_102270691	3300005938	Soil	VAFLATEREIEMNYRSGGVGIVGVIIIVLVILWLVHVI*
Ga0066794_100640891	3300005947	Soil	CEAAAARLTHMRRPNGRAVTEREIEMNSRTGGVGIVGVIIIVLVVLWLLKVI*
Ga0066794_102219771	3300005947	Soil	MVGLVIEQEIDINYRSGGIGIVGVIFIVVVILFLVGVIKL*
Ga0075417_101845134	3300006049	Populus Rhizosphere	LGVVTNLEMKMNYRSGGIGIVGVIVIVLIVLFVVGRL*
Ga0070716_1016595322	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSQREIEMYIGGGIGIVGVIVIVLVILWLVGVIKL*
Ga0075527_100131913	3300006640	Arctic Peat Soil	MALLVAEREIEMYSRGGGIGIVGVIIIVLVILWLIHVI*
Ga0075527_102191152	3300006640	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIIGVIVIVLVILWLVGVIKL*
Ga0075521_101679302	3300006642	Arctic Peat Soil	VQPRSISRTLALLVAEREIDMYSRGGGVGIVGVIIIVLVILWLIHVI*
Ga0075520_10440516	3300006795	Arctic Peat Soil	VQPRGISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI*
Ga0075520_11166592	3300006795	Arctic Peat Soil	MAAKVIGREIEMNSRSGGIGIVGVIVIVLVILWLLHVI*
Ga0075520_13169141	3300006795	Arctic Peat Soil	VSAEDGPLVAEREIEMYSRGGGVGIVGVIIIVLVILWLLHVI*
Ga0066797_10845713	3300006864	Soil	MAAKVIGREIEMNSRSGGIGIVGVIVIILVILWLVGVIKL*
Ga0066797_12698431	3300006864	Soil	VQPRSIGRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI*
Ga0075528_100177893	3300006949	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLLHVI*
Ga0075528_102040452	3300006949	Arctic Peat Soil	VQPLSISRKLALLVAEREIEMNSRGGGVGIVGVIIIVLVILWLVHVI*
Ga0075524_104376381	3300006950	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVVLWLIHVI*
Ga0120148_10458961	3300011999	Permafrost	PQHDPVPEQEIEMRNGGVGIIGVIVIVLVILWLAGVIKL*
Ga0120127_100225892	3300013503	Permafrost	MAAVAHHWEIEMNRNGGIGIIGVIVIVLVILWLLGVIKL*
Ga0120147_10175022	3300013758	Permafrost	VPEQEIEMRNGGVGIIGVIVVVLVILWLVGVIRL*
Ga0120181_10990672	3300013766	Permafrost	VPEQEIEMRNGGVGIIGVIVIVLVILWLAGVIKL*
Ga0182010_105066302	3300014490	Fen	VQPRSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI*
Ga0182010_107083501	3300014490	Fen	VQPRSISRKLALLVAEQEIEMYSRGGGVGIVGVIIIVLV
Ga0182017_106537402	3300014494	Fen	MALLVAEREIEMYSRGGGIGIVGVIIIVLVILWLVHVI*
Ga0182019_101418973	3300014498	Fen	VQPRSISRKLALLVAEREIEMNSRGGGVGIVGVILIVLVILWLVHVI*
Ga0182027_107256161	3300014839	Fen	VQPRSLSRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI*
Ga0182027_123737562	3300014839	Fen	RALLATEVEIEMNRGGGVGIVGVIVIVLVILWLVHVI*
Ga0184605_100967683	3300018027	Groundwater Sediment	MALLGAGWEVEMRGGGIGIIGVIVIVLVILWLLGYIKL
Ga0184605_101948533	3300018027	Groundwater Sediment	SGTALSACQTEVDMNRGGGIGIVGVIIIVLVILWLVGVIKV
Ga0184608_103038392	3300018028	Groundwater Sediment	MGRMALLGARWEVEMRGGGIGIIGVIVIVLVILWLLGYIKL
Ga0184619_100269505	3300018061	Groundwater Sediment	MALLGARWEVEMRGGGIGIIGVIVIVLVILWLLGYIKL
Ga0184619_101090772	3300018061	Groundwater Sediment	MGRMALLGAGWEVEMRGGGIGIIGVIVIVLVILWLLGYIKL
Ga0256681_103272784	3300023311	Freshwater	RRMALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI
Ga0256681_125141363	3300023311	Freshwater	MPARRLSGFSATEREIEMNYRSGGVGIVGVIIIVLVILWLLHVI
Ga0208081_10083835	3300025443	Arctic Peat Soil	MGLLVTEREIEMNYRSGGIGIVGVIIIVLVILWLVHVI
Ga0208081_10341082	3300025443	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLAHVI
Ga0208850_10490342	3300025457	Arctic Peat Soil	VAFLATEREIEMNYRSGGVGIVGVIIIVLVILWLVHVI
Ga0208587_11039581	3300025484	Arctic Peat Soil	VALSATGWEIEMNYRSGGVGIVGVIVIVLVILWLVHVI
Ga0207932_10548852	3300025495	Arctic Peat Soil	MRRPNGRAATEGEIEMNSRTGGVGIVGVIIIVLVILWLLKVI
Ga0208584_10660332	3300025533	Arctic Peat Soil	VQPPSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0208584_10918881	3300025533	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0208716_10270322	3300025548	Arctic Peat Soil	MAAKVIGREIEMNSRSGGIGIVGVIVIILVILWLVGVIKL
Ga0208080_10696801	3300025553	Arctic Peat Soil	LEWPSWILESENEMNNRGGGVGIVGVIVIVLVVLWLLHVI
Ga0209385_10289161	3300025650	Arctic Peat Soil	RKLASLVAEREIEMYSRGGGVGIVGVIIIVLVILWLVHVI
Ga0209385_10949802	3300025650	Arctic Peat Soil	VQPRSISRTLALLVAEREIDMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0209744_11634702	3300025692	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMYSRGGGIGIVGVIIIVLVILWLIHVI
Ga0209745_11767421	3300025739	Arctic Peat Soil	MAHLLVTKREIGMNYRSGGIGIVGVIVIVLVILFLVGVIKL
Ga0209745_12065071	3300025739	Arctic Peat Soil	MRRPNGRAATEREIEMNSRTGGIGIVGVIIIVLVVLWLLKVI
Ga0209539_11073792	3300025764	Arctic Peat Soil	MAVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLLHVI
Ga0209748_10730461	3300025836	Arctic Peat Soil	AVQVIGREIEMNSRSGGIGIVGVIVIVLVILWLAHVI
Ga0209538_10833511	3300025846	Arctic Peat Soil	LALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0209538_12024262	3300025846	Arctic Peat Soil	QSAGVVTNLETKMNYRSGGIGIVGVIVIVIVVLFLLGRL
Ga0209176_100527991	3300025854	Arctic Peat Soil	MAVQVIGREIKMNSRSGGIGIVGVIIIVLVILWLAHVI
Ga0209014_101913802	3300025857	Arctic Peat Soil	MGLLVTEREIEMNYRSGGVGIVGVIIIVLVILWLVHVI
Ga0209429_102299261	3300025864	Arctic Peat Soil	VTRSEIGMNYRSGGIGIVGVIVIVLVILFLVGVIKL
Ga0209226_100895533	3300025865	Arctic Peat Soil	MASLVAEREIKMYSRGGGIGIVGVIIIVLVILWLVHVI
Ga0209226_103079451	3300025865	Arctic Peat Soil	MAHLLVTRSEIGMNYRSGGIGIVGVIVIVLVILFLVGVIKL
Ga0209584_100097172	3300025878	Arctic Peat Soil	VSAEDGPLVAEREIEMYSRGGGVGIVGVIIIVLVILWLLHVI
Ga0209540_100826621	3300025888	Arctic Peat Soil	MALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0209540_106571642	3300025888	Arctic Peat Soil	ALLVAEREIEMYSRGGGVGIVGVIIIVLVILWLIHVI
Ga0209585_103664181	3300025891	Arctic Peat Soil	VQPRSISRKLALLVAEREIEMYSRGGGVGIVGVIIIVLVVLWLIHVI
Ga0207665_111241342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VVSQREIEMYIGGGIGIVGVIVIVLVILWLVGVIKL
Ga0209880_10109903	3300026271	Soil	MAVQVIGREIKMNSRSGGIGIVGVIIIVLVILWLVHVI
Ga0209814_100398772	3300027873	Populus Rhizosphere	LGVVTNLEMKMNYRSGGIGIVGVIVIVLIVLFVVGRL
Ga0307282_100332823	3300028784	Soil	MALLGARWEVEMRGGGIGIIGVIVIVLVILWLLGYIK
Ga0307284_103816451	3300028799	Soil	RMALLGAGWEVEMRGGGIGIIGVIVIVLVILWLLGYIKL
Ga0302323_1019708452	3300031232	Fen	VQPRSISRKLALLVAEREIEMNSRGGGVGIVGVILIVLVILWLVHVI
(restricted) Ga0255312_10581081	3300031248	Sandy Soil	DTQLNGRSSMNYRTGGVGIVGVIVIVLVILWLVGVIKI
Ga0302322_1021523631	3300031902	Fen	AFLATEVEIEMNRGGGVGIVGVIVIVLVILWLVHVI
Ga0311301_114184211	3300032160	Peatlands Soil	SRRATREVDMNRGGGVGIVGVIVIVLVILWLVHVI
Ga0334822_065692_563_679	3300034070	Soil	MAFLATEREIEMNYRSGGVGIVGVIIIVLVILWLLKVI
Ga0370487_0174034_36_152	3300034170	Untreated Peat Soil	MASLVSGRESEMNSRTGGVGIVGVIVIVLVILWLLKVI
Ga0370501_0071841_791_913	3300034195	Untreated Peat Soil	MGLLVTEREIEMNYRSGGIGIVGVIVIVLVILFLVGVIKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters