Metagenome / Metatranscriptome Family F099707

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	87 residues
Representative Sequence	LPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Number of Associated Samples	92
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	95.15 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.845 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (33.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.777 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.09% β-sheet: 0.00% Coil/Unstructured: 27.91%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07366	SnoaL	20.39
PF12804	NTP_transf_3	12.62
PF00924	MS_channel	9.71
PF02417	Chromate_transp	5.83
PF12680	SnoaL_2	3.88
PF00196	GerE	1.94
PF00005	ABC_tran	1.94
PF06737	Transglycosylas	1.94
PF08241	Methyltransf_11	0.97
PF01420	Methylase_S	0.97
PF13641	Glyco_tranf_2_3	0.97
PF00376	MerR	0.97
PF01476	LysM	0.97
PF01872	RibD_C	0.97
PF13424	TPR_12	0.97
PF04542	Sigma70_r2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	9.71
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	9.71
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	5.83
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.97
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.97
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.97
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.97
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.97
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.97
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.84 %
Unclassified	root	N/A	28.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.84 %
Unclassified	root	N/A	28.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.84 %
Unclassified	root	N/A	28.16 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.96 %
Unclassified	root	N/A	28.16 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.99 %
Unclassified	root	N/A	28.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.16 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.97 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.97 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.97 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.97 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.16 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.97 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.97 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.16 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.97 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.97 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.97 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.97 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.97 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.16 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.97 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.97 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.97 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.97 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.97 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GJ87FRN02JEL19	Not Available	528	Open in IMG/M
2170459010\|GIO7OMY02JZS6X	Not Available	535	Open in IMG/M
2199352025\|deepsgr__Contig_24371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105884178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300001431\|F14TB_105750827	Not Available	552	Open in IMG/M
3300001867\|JGI12627J18819_10477730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300004114\|Ga0062593_100466121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1157	Open in IMG/M
3300005328\|Ga0070676_10580787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300005336\|Ga0070680_100594634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300005337\|Ga0070682_101866465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	526	Open in IMG/M
3300005339\|Ga0070660_100104941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2242	Open in IMG/M
3300005347\|Ga0070668_100097777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2322	Open in IMG/M
3300005438\|Ga0070701_10085160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1720	Open in IMG/M
3300005439\|Ga0070711_100272739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300005439\|Ga0070711_100870430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300005467\|Ga0070706_101171287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300005468\|Ga0070707_100714605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300005471\|Ga0070698_100590678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1050	Open in IMG/M
3300005471\|Ga0070698_101657464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300005546\|Ga0070696_100680809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300005561\|Ga0066699_10573553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300005563\|Ga0068855_101560294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300005586\|Ga0066691_10243002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300005617\|Ga0068859_102044090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300006173\|Ga0070716_101692793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300006175\|Ga0070712_100205227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1551	Open in IMG/M
3300006358\|Ga0068871_101129080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300006358\|Ga0068871_102262695	Not Available	518	Open in IMG/M
3300006755\|Ga0079222_10147949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1330	Open in IMG/M
3300006804\|Ga0079221_10143370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1239	Open in IMG/M
3300006804\|Ga0079221_10795438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300006903\|Ga0075426_10294512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300009177\|Ga0105248_10701852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1142	Open in IMG/M
3300010359\|Ga0126376_10208091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300010360\|Ga0126372_10173841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1758	Open in IMG/M
3300010396\|Ga0134126_11135247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	870	Open in IMG/M
3300010397\|Ga0134124_11762529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300010399\|Ga0134127_10300630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300010401\|Ga0134121_11207064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300010937\|Ga0137776_1457791	Not Available	512	Open in IMG/M
3300012200\|Ga0137382_11226151	Not Available	532	Open in IMG/M
3300012211\|Ga0137377_10392889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1325	Open in IMG/M
3300012362\|Ga0137361_10509147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1106	Open in IMG/M
3300012925\|Ga0137419_10401765	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300012986\|Ga0164304_11726675	Not Available	523	Open in IMG/M
3300012989\|Ga0164305_11263167	Not Available	643	Open in IMG/M
3300013104\|Ga0157370_11368842	Not Available	637	Open in IMG/M
3300013105\|Ga0157369_12489368	Not Available	524	Open in IMG/M
3300013297\|Ga0157378_10138894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2255	Open in IMG/M
3300014157\|Ga0134078_10642773	Not Available	513	Open in IMG/M
3300015373\|Ga0132257_101525662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300016270\|Ga0182036_10451771	Not Available	1010	Open in IMG/M
3300017955\|Ga0187817_10977689	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300017959\|Ga0187779_11224382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300017972\|Ga0187781_10119610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1836	Open in IMG/M
3300017974\|Ga0187777_10204042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1333	Open in IMG/M
3300019362\|Ga0173479_10748605	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300020081\|Ga0206354_10897291	Not Available	662	Open in IMG/M
3300021170\|Ga0210400_11064031	Not Available	656	Open in IMG/M
3300021404\|Ga0210389_10527424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300021405\|Ga0210387_10615069	Not Available	965	Open in IMG/M
3300021478\|Ga0210402_11150216	Not Available	703	Open in IMG/M
3300021479\|Ga0210410_10493299	Not Available	1094	Open in IMG/M
3300022709\|Ga0222756_1053664	Not Available	609	Open in IMG/M
3300022722\|Ga0242657_1218176	Not Available	534	Open in IMG/M
3300025910\|Ga0207684_10898798	Not Available	745	Open in IMG/M
3300025916\|Ga0207663_10608508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	859	Open in IMG/M
3300025927\|Ga0207687_11346541	Not Available	614	Open in IMG/M
3300025928\|Ga0207700_10344114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300025928\|Ga0207700_11042298	Not Available	732	Open in IMG/M
3300025928\|Ga0207700_11835837	Not Available	532	Open in IMG/M
3300025929\|Ga0207664_10987484	All Organisms → cellular organisms → Bacteria → Terrabacteria group	755	Open in IMG/M
3300025972\|Ga0207668_10141890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1849	Open in IMG/M
3300026078\|Ga0207702_11502103	Not Available	667	Open in IMG/M
3300026088\|Ga0207641_11008184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300026089\|Ga0207648_10154899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2023	Open in IMG/M
3300026552\|Ga0209577_10883235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300027080\|Ga0208237_1015358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300027775\|Ga0209177_10231233	Not Available	673	Open in IMG/M
3300027775\|Ga0209177_10421208	Not Available	540	Open in IMG/M
3300028381\|Ga0268264_10334540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300028768\|Ga0307280_10267786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300031561\|Ga0318528_10715430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300031718\|Ga0307474_10332458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1174	Open in IMG/M
3300031795\|Ga0318557_10353093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300031833\|Ga0310917_10770708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300031833\|Ga0310917_11143754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300031879\|Ga0306919_10344943	Not Available	1137	Open in IMG/M
3300031996\|Ga0308176_11771496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300032001\|Ga0306922_10628291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300032068\|Ga0318553_10573759	Not Available	591	Open in IMG/M
3300032174\|Ga0307470_10596137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300032205\|Ga0307472_100525777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300032261\|Ga0306920_102220827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300032770\|Ga0335085_10239937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2187	Open in IMG/M
3300032770\|Ga0335085_11434964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	722	Open in IMG/M
3300032783\|Ga0335079_11721647	Not Available	612	Open in IMG/M
3300032805\|Ga0335078_10365216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1911	Open in IMG/M
3300032828\|Ga0335080_11367034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300032828\|Ga0335080_11984530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300032892\|Ga0335081_12666148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300032954\|Ga0335083_10644943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300032954\|Ga0335083_11078793	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.55%
Host-Associated	Host-Associated	18.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.61%
Plants	Host-Associated → Plants	18.45%
Aquatic	Environmental → Aquatic	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.80%
Roots	Host-Associated → Plants → Roots	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.57%
Loam	Environmental → Terrestrial → Soil → Loam	20.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_00401650	2124908006	Soil	GLLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAETFAAQETLDQVAHHYRRITGRSPRTPGGNG
F62_06510010	2170459010	Grass Soil	IANVITEPDLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQIAHHYRRITGRGT
deepsgr_03433700	2199352025	Soil	LPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
INPhiseqgaiiFebDRAFT_1058841782	3300000364	Soil	MVLTGDTYRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAEMFAAQETRDQVARHYRRITGRSA*
F14TB_1057508271	3300001431	Soil	PNVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDMWLNHPLDAAVEHSMDDFAGTFAAQETRDQVAYHYRRITGRSP*
JGI12627J18819_104777301	3300001867	Forest Soil	TEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVAXHYRRITGRGT*
Ga0062593_1004661212	3300004114	Soil	REMVLTGDIYRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVERSTDEFAETFAAQETRDQIAHHYRRITGRTT*
Ga0070676_105807872	3300005328	Miscanthus Rhizosphere	ITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070680_1005946342	3300005336	Corn Rhizosphere	YRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070682_1018664651	3300005337	Corn Rhizosphere	IYRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHSLDAAVEYSTDEFAETFAAQETRDQVAHHYRRITGRSP*
Ga0070660_1001049411	3300005339	Corn Rhizosphere	DQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070668_1000977775	3300005347	Switchgrass Rhizosphere	EPGLLTEATERLLERTATHTRTVTAAQRRLFGVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070701_100851601	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070711_1002727393	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LDQLPPHSIANVVTEPGQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG*
Ga0070711_1008704302	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ITEPGLLTEATERLLERTATHTRTVTATQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070706_1011712872	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PHSIANITTEPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAEIFTTQETRDQVAYHYRRITGRST*
Ga0070707_1007146052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070698_1005906782	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TEPGLLAEATERMLERTAAHTRTVTAAQRRLFSLWLNNPLDEAVERSTDEFARTFEAQETRDQIAHHYRRITGRSS*
Ga0070698_1016574642	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	YRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNNPLDAAVEHSMDEFAGTFGAQETRDQIAHYHRRITGRGS*
Ga0070696_1006808092	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AREMVLTGDIYRLDQLPPHSIANVTTEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0066699_105735532	3300005561	Soil	TGDTYRLDQLPPHSIANDITEPGLLADATERLLDRTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAGTFAAQETHDQIAHHYRRITRRNPLAEPGHYQRSLTRRLP*
Ga0068855_1015602941	3300005563	Corn Rhizosphere	IANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0066691_102430022	3300005586	Soil	LDQLPPHSIANVVTEPGHLAEATEHLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEYSTDEFAGTFGAQETRDHIADHYRRITGRSS*
Ga0068859_1020440901	3300005617	Switchgrass Rhizosphere	LDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0070716_1016927931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PHSIANVITEPGLLTEATERLLERTATHTRTVTATQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRGT*
Ga0070712_1002052272	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LAEATERLLERTATHTRTVTSAQRRLFNLWLNNPLDAAVEQSTDEFAGTFETQETRDQIACHYRRITGRGT*
Ga0068871_1011290802	3300006358	Miscanthus Rhizosphere	EPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0068871_1022626951	3300006358	Miscanthus Rhizosphere	DQLPPHSIANVVTEPGQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG*
Ga0079222_101479491	3300006755	Agricultural Soil	RLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHPLDAAVEYSTDEFAETFAAQETRDQIARHYRRITGRSP*
Ga0079221_101433701	3300006804	Agricultural Soil	DAYRLGELPPHSIANVVTEPGQLAEATERLLDRTATHTRTVTAAQRRLFDMWLNHPLDEAVELSTGEFAGTFGAQETRDQIERHYQRITGHR*
Ga0079221_107954381	3300006804	Agricultural Soil	TEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVAHHYRRITGRST*
Ga0075426_102945121	3300006903	Populus Rhizosphere	LDQLPPHSIANVITEPGLLTEATERLLERTAKHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0105248_107018522	3300009177	Switchgrass Rhizosphere	GLSKAREMVLTGDIYRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHPLDAAVEYSTDEFAETFAAQETRDQVAHHYRRITGRSP*
Ga0126376_102080911	3300010359	Tropical Forest Soil	VLTGDIYRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAEAFAAQETRDQIAHHYRRITGGSA*
Ga0126372_101738411	3300010360	Tropical Forest Soil	VITEPGFLTEATERLLERTATHTRTVTAAQRRLFRVWLNHPLDVAVERSTDEFAETFAAQETRDQIAHHYRRITGGSA*
Ga0134126_111352471	3300010396	Terrestrial Soil	NCIANVVTEPGQLAEATERLLERTATHTRTVTAAQRRLFDMWLNHPLDEAVELSTDEFAGTFGAQETRDQIERHYRRITSHGS*
Ga0134124_117625291	3300010397	Terrestrial Soil	LPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHPLDAAVGHSTDEFAGTFAAQETRDQIARHYRRITGRSP*
Ga0134127_103006303	3300010399	Terrestrial Soil	VISEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0134121_112070641	3300010401	Terrestrial Soil	AREMVLTGDIYRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHPLDAAVGHSTDEFAGTFAAQETRDQIARHYRRITGRSP*
Ga0137776_14577911	3300010937	Sediment	EPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNSPLDAAVEHSTDEFAGTFGAQETRDQIADHYRRITGRGT*
Ga0137382_112261511	3300012200	Vadose Zone Soil	FVGLNKAREMVLTGDTYRLDQLPPHSIANVITEPGLLAEATERLLERTAPHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAETFAAQETRDQVAQHYRRITGRST*
Ga0137377_103928891	3300012211	Vadose Zone Soil	PSLLAEATERLLQRTATHTRTVTAAQRRLFDLWLNHPLDAAVEHSMDEFAGTFGAQETRDQIAHHYRRITGRGS*
Ga0137361_105091473	3300012362	Vadose Zone Soil	LLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDVAVEHSTDEFAGTFAAQETRDQIAHHYRRITGRSS*
Ga0137419_104017651	3300012925	Vadose Zone Soil	TGDIYRLDQLPPHSIANVVTEPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAAQETRDQVARHYRRITGRST*
Ga0164304_117266751	3300012986	Soil	PPHSIANVVTEPGQLAEATEHLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAGTFGAQETRDHIARHYRRITGRSSLTEHAGPDGRPG*
Ga0164305_112631671	3300012989	Soil	GQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG*
Ga0157370_113688421	3300013104	Corn Rhizosphere	QLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG*
Ga0157369_124893682	3300013105	Corn Rhizosphere	HSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0157378_101388941	3300013297	Miscanthus Rhizosphere	IANVISEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0134078_106427731	3300014157	Grasslands Soil	EMVLTGDIYRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAETFAAQETRDQVAHHYRRITGRST*
Ga0132257_1015256622	3300015373	Arabidopsis Rhizosphere	LDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST*
Ga0182036_104517712	3300016270	Soil	TGDAYRLDELPPHSIANVITQPGLLAEATGRLLERTATHTRTVTAAQRRLFSLWLNHSLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRRP
Ga0187817_109776891	3300017955	Freshwater Sediment	DQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDQIAHHYRRITGRSL
Ga0187779_112243822	3300017959	Tropical Peatland	LSKAREMMLTGDTHRLDQLPPHSIANVITEPGLLGEATERLLESTATHTRTVTAAQRRLFNLWLNSPLDEAVEQSTDEFAGTFGMQETQDQIARHYRRITSRGSG
Ga0187781_101196103	3300017972	Tropical Peatland	ATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHGTDEFAGTFGAQETRDQIAHHYRRITGRSL
Ga0187777_102040422	3300017974	Tropical Peatland	LAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDQIAHHYRRITGRGL
Ga0173479_107486051	3300019362	Soil	DQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTGAQRRLFSLWLNHPLDAAVEHSTDEFAGTFGARETRDQIAYHYRRITGRST
Ga0206354_108972911	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	DQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0210400_110640311	3300021170	Soil	ANVVTEPGQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEYSTDEFAETFGAQETRDHIADHYRRITGRSS
Ga0210389_105274242	3300021404	Soil	PGRLAEATERLLERTATHTRTVTAAQRRLFNLWLNNPLDASVEHSTDEFAGTFETQETRDQIAYHYRRITGRGT
Ga0210387_106150693	3300021405	Soil	RLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQIAHHYRRITGRGT
Ga0210402_111502162	3300021478	Soil	HSIANVVTEPGQLAEATEHLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEYSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTERGGLDGRPG
Ga0210410_104932992	3300021479	Soil	IANVVAEPGQLAEATEHLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEYSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTERGGLDGRPG
Ga0222756_10536641	3300022709	Soil	EPGLLAEAAERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEQSTDEFAGTFGAQETRDQIAHHHRRITGRSS
Ga0242657_12181761	3300022722	Soil	ANVITEPGLLAEAAERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGTFGAQETHDHIAHHYRRITGRSR
Ga0207684_108987981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAEIFTTQETRDQVAYHYRRITGRST
Ga0207663_106085081	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LDQLPPHSIANVVTEPGQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG
Ga0207687_113465411	3300025927	Miscanthus Rhizosphere	EATERLLERTVTHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0207700_103441141	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ILTGDTYRLDQLPPHSIANVVTEPGHLAEATEHLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEYSTDEFAGTFGAQETRDHIADHYRRITGRSS
Ga0207700_110422982	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TTEPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAEIFTNQETRDQVAYHYRRITGRST
Ga0207700_118358371	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TGDVYQLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAEMFAAQETRDQVARHYRRITGRGT
Ga0207664_109874842	3300025929	Agricultural Soil	VTEPGQLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAGTFGAQETRDHIAHHYRRITGRSSLTEHAGPDGRPG
Ga0207668_101418903	3300025972	Switchgrass Rhizosphere	PLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHSLDAAVEYSTDEFAETFAAQETRDQVAHHYRRITGRSP
Ga0207702_115021032	3300026078	Corn Rhizosphere	EATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0207641_110081842	3300026088	Switchgrass Rhizosphere	REMVLTGDTYRLDQLPPHSIANVISEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0207648_101548991	3300026089	Miscanthus Rhizosphere	VLTGDTYRLDQLPPHSIANVISEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0209577_108832351	3300026552	Soil	IANDITEPGLLAEATERLLDRTATHPRTVTAAQRRLFSLWLNNPLDAAVERSTDEFAGTFAAQETHDQIAHHYRRITRRNPLAEPGHYQRSLTRRLP
Ga0208237_10153582	3300027080	Forest Soil	GDTYRLDQLPPHSIANVITEPGLLAEATERLLERAATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFGAQETRDQIAHHHRRITGRSS
Ga0209177_102312331	3300027775	Agricultural Soil	SVANVITEPSLLAEAAERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGTFGAQETRDQIAHHYRRITGRSR
Ga0209177_104212081	3300027775	Agricultural Soil	EMVLTGDIYRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTATQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0268264_103345401	3300028381	Switchgrass Rhizosphere	TYRLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAETFAAQETRDQVARHYRRITGRST
Ga0307280_102677862	3300028768	Soil	PGLLAEATERLLERTATHTRTVTAAQRRVFSLWLNQPLDAAVEHSTDEFAETFAAQETRDQVAHHYRRITGRST
Ga0318528_107154301	3300031561	Soil	TEPGLLAEATGRLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSTDEFAGTFAAQETRDQIARHNRRVTGRGS
Ga0307474_103324583	3300031718	Hardwood Forest Soil	KAREMVLTGDIYQLDQLPPHSIANVITEPGLLTEATERLLERTATHTRTVTAAQRRLFSVWLNHPLDAAVEHSTDEFAEMFAAQETRDQVARHYRRITGRGT
Ga0318557_103530932	3300031795	Soil	LTGDTYRLDELPPHSIANVITQPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0310917_107707081	3300031833	Soil	EATERLLERAATHTRTVTAAQRRLFSFWLNNPLDVAVEHSTDEFAGTFGAQETRDQIAHHYTRITGRSS
Ga0310917_111437541	3300031833	Soil	LAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0306919_103449432	3300031879	Soil	LPPHSIANVITQPGLLAEATERLLARTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0308176_117714961	3300031996	Soil	RLDQLPPDSIANIITEPGHLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAETFAAQETGDQVAHHYRRITGRSTLVW
Ga0306922_106282911	3300032001	Soil	PPHSIANVTTQPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNHSLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0318553_105737591	3300032068	Soil	DTYRLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDEAVEHSTEEFAETFGAQETRDQITYHYRRITDRGL
Ga0307470_105961372	3300032174	Hardwood Forest Soil	TEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHPLDAAVGHSTDEFAGTFAAQETRDQIARHYRRITGRSP
Ga0307472_1005257772	3300032205	Hardwood Forest Soil	IYPLDQLPPHSIANVITEPGLLAEATERLLERTATHTRTVTAAQRRLFDLWLNHSLDAAVEYSTDEFAETFAAQETRDQVAYHYRRITGRSP
Ga0306920_1022208271	3300032261	Soil	LTGDTYRLDELPPDSIANVITQPGLLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0335085_102399371	3300032770	Soil	SKAREMVLTGDTYRLDQLPPHSIANVITEPGLLAEATEHLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAETFAAQETRDQVAHHYRRITGRSPYG
Ga0335085_114349641	3300032770	Soil	PHSIANVITEPGLLAEATERLLERAATHTRTVTAAQRRLFSFWLNNPLDAAVEHSMDEFAGTFGAPETRGQIAYHYKRITGRSS
Ga0335079_117216472	3300032783	Soil	SIANVITQPGLLTEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVERSTDEFAGAFAAQETRDQIASHYRRITGRSP
Ga0335078_103652164	3300032805	Soil	LAEATERLLDRTATHTRTVIAAQRRLFSLWLNHPLDEAVERSTDEFAGTFAVQETRDQIAHHFRRITGRDA
Ga0335080_113670342	3300032828	Soil	YRLDQLPPHSVANVITEPGLLAEATERLLDRTATHTRTVIAAQRRLFSLWLNHPLDEAVERSTDEFAGTFAAQETRDQIARHYRRITGRNS
Ga0335080_119845302	3300032828	Soil	TYRLDQLPPHSIANVITEPGRLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEQSTDEFAETFAAQETRDQVAHHYRRITGRST
Ga0335081_126661481	3300032892	Soil	LTGDTYRLDQLPPHSIANVITEPGLLAEATGHLLERTATHTRTVTAAQRRLFGLWLNHPLDAAVEHSTDEFAETFAAQETRDQVAHHYRRITGRSPSC
Ga0335083_106449431	3300032954	Soil	AEATERLLERTATHTRTVTAAQRRLFSLWLNNPLDAAVEHSSDEFAGTFAAQETRDQIARHYRRITGSSS
Ga0335083_110787931	3300032954	Soil	LPPHSIANVITQPGVLAEATERLLERTATHTRTVTAAQRRLFSLWLNHPLDAAVEHSTDEFAGTFGAQETRDQIAYHYRRITGRNT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences