Basic Information | |
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Family ID | F099691 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 53 residues |
Representative Sequence | MRAVTEYRDRAQECRKLARMVHKLEDKYALDCAAQSWERLADRRERDIDAEN |
Number of Associated Samples | 66 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 54.37 % |
% of genes near scaffold ends (potentially truncated) | 40.78 % |
% of genes from short scaffolds (< 2000 bps) | 83.50 % |
Associated GOLD sequencing projects | 62 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.76 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (58.252 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.184 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.515 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (66.019 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 58.75% β-sheet: 0.00% Coil/Unstructured: 41.25% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.76 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
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a.25.1.1: Ferritin | d4iwka_ | 4iwk | 0.94934 |
a.25.1.1: Ferritin | d6txia_ | 6txi | 0.9411 |
a.25.1.0: automated matches | d6sooa_ | 6soo | 0.92765 |
a.25.1.2: Ribonucleotide reductase-like | d3n20b_ | 3n20 | 0.91536 |
a.25.1.1: Ferritin | d2fzfa1 | 2fzf | 0.9136 |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF04392 | ABC_sub_bind | 4.85 |
PF13649 | Methyltransf_25 | 2.91 |
PF12847 | Methyltransf_18 | 1.94 |
PF03401 | TctC | 1.94 |
PF13356 | Arm-DNA-bind_3 | 0.97 |
PF00486 | Trans_reg_C | 0.97 |
PF12327 | FtsZ_C | 0.97 |
PF11146 | DUF2905 | 0.97 |
PF00091 | Tubulin | 0.97 |
PF03473 | MOSC | 0.97 |
PF01928 | CYTH | 0.97 |
PF09954 | DUF2188 | 0.97 |
PF03176 | MMPL | 0.97 |
PF02780 | Transketolase_C | 0.97 |
PF07345 | DUF1476 | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 4.85 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 1.94 |
COG1033 | Predicted exporter protein, RND superfamily | General function prediction only [R] | 0.97 |
COG2409 | Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily | General function prediction only [R] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 58.25 % |
All Organisms | root | All Organisms | 41.75 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000597|AF_2010_repII_A1DRAFT_10000617 | All Organisms → cellular organisms → Bacteria | 8427 | Open in IMG/M |
3300000597|AF_2010_repII_A1DRAFT_10170449 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis | 518 | Open in IMG/M |
3300000793|AF_2010_repII_A001DRAFT_10000075 | All Organisms → cellular organisms → Bacteria | 15621 | Open in IMG/M |
3300001867|JGI12627J18819_10176733 | Not Available | 865 | Open in IMG/M |
3300004633|Ga0066395_10003811 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 5219 | Open in IMG/M |
3300004633|Ga0066395_10195952 | All Organisms → cellular organisms → Bacteria | 1054 | Open in IMG/M |
3300005332|Ga0066388_100054952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 4143 | Open in IMG/M |
3300005332|Ga0066388_100274761 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2327 | Open in IMG/M |
3300005332|Ga0066388_100870947 | All Organisms → cellular organisms → Bacteria | 1483 | Open in IMG/M |
3300005332|Ga0066388_101379701 | All Organisms → cellular organisms → Bacteria | 1222 | Open in IMG/M |
3300005332|Ga0066388_102708139 | Not Available | 905 | Open in IMG/M |
3300005332|Ga0066388_103272556 | Not Available | 828 | Open in IMG/M |
3300005332|Ga0066388_103394718 | Not Available | 813 | Open in IMG/M |
3300005332|Ga0066388_104624288 | Not Available | 700 | Open in IMG/M |
3300005332|Ga0066388_105980878 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 615 | Open in IMG/M |
3300005332|Ga0066388_108728320 | Not Available | 503 | Open in IMG/M |
3300005439|Ga0070711_100177121 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1630 | Open in IMG/M |
3300005713|Ga0066905_100676497 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 883 | Open in IMG/M |
3300005764|Ga0066903_100982955 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1540 | Open in IMG/M |
3300005764|Ga0066903_101773256 | Not Available | 1178 | Open in IMG/M |
3300005764|Ga0066903_106358138 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 616 | Open in IMG/M |
3300006174|Ga0075014_100398612 | Not Available | 750 | Open in IMG/M |
3300009792|Ga0126374_10130472 | All Organisms → cellular organisms → Bacteria | 1487 | Open in IMG/M |
3300010046|Ga0126384_10585930 | Not Available | 974 | Open in IMG/M |
3300010048|Ga0126373_10150180 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 2213 | Open in IMG/M |
3300010048|Ga0126373_11179679 | Not Available | 832 | Open in IMG/M |
3300010048|Ga0126373_12190810 | Not Available | 614 | Open in IMG/M |
3300010361|Ga0126378_10667964 | Not Available | 1152 | Open in IMG/M |
3300010376|Ga0126381_100207863 | Not Available | 2622 | Open in IMG/M |
3300012948|Ga0126375_10082109 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 1848 | Open in IMG/M |
3300012971|Ga0126369_10533926 | Not Available | 1236 | Open in IMG/M |
3300016294|Ga0182041_10102206 | All Organisms → cellular organisms → Bacteria | 2109 | Open in IMG/M |
3300016341|Ga0182035_10292296 | All Organisms → cellular organisms → Bacteria | 1333 | Open in IMG/M |
3300016371|Ga0182034_10989648 | Not Available | 726 | Open in IMG/M |
3300016371|Ga0182034_11379173 | Not Available | 616 | Open in IMG/M |
3300016404|Ga0182037_10644116 | Not Available | 903 | Open in IMG/M |
3300016445|Ga0182038_10038682 | All Organisms → cellular organisms → Bacteria | 3082 | Open in IMG/M |
3300016445|Ga0182038_10709896 | Not Available | 876 | Open in IMG/M |
3300016445|Ga0182038_12000250 | Not Available | 525 | Open in IMG/M |
3300017974|Ga0187777_10950291 | Not Available | 620 | Open in IMG/M |
3300017993|Ga0187823_10093644 | Not Available | 889 | Open in IMG/M |
3300018032|Ga0187788_10388055 | Not Available | 584 | Open in IMG/M |
3300018058|Ga0187766_10490323 | Not Available | 826 | Open in IMG/M |
3300021560|Ga0126371_10049788 | Not Available | 4006 | Open in IMG/M |
3300021560|Ga0126371_10542476 | Not Available | 1312 | Open in IMG/M |
3300021560|Ga0126371_10559527 | Not Available | 1292 | Open in IMG/M |
3300021560|Ga0126371_10847977 | Not Available | 1059 | Open in IMG/M |
3300021560|Ga0126371_11509571 | Not Available | 800 | Open in IMG/M |
3300021560|Ga0126371_11772035 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07 | 740 | Open in IMG/M |
3300021560|Ga0126371_12340031 | Not Available | 646 | Open in IMG/M |
3300021560|Ga0126371_13257203 | Not Available | 549 | Open in IMG/M |
3300026817|Ga0207775_105455 | All Organisms → cellular organisms → Bacteria | 1017 | Open in IMG/M |
3300026871|Ga0207825_114518 | Not Available | 534 | Open in IMG/M |
3300026872|Ga0207785_1026858 | Not Available | 502 | Open in IMG/M |
3300027703|Ga0207862_1163415 | Not Available | 665 | Open in IMG/M |
3300027874|Ga0209465_10000844 | All Organisms → cellular organisms → Bacteria | 13981 | Open in IMG/M |
3300031231|Ga0170824_105023337 | All Organisms → cellular organisms → Bacteria | 2214 | Open in IMG/M |
3300031543|Ga0318516_10008383 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 4884 | Open in IMG/M |
3300031545|Ga0318541_10652118 | Not Available | 588 | Open in IMG/M |
3300031549|Ga0318571_10322223 | Not Available | 586 | Open in IMG/M |
3300031573|Ga0310915_10153022 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans | 1595 | Open in IMG/M |
3300031573|Ga0310915_11296988 | Not Available | 501 | Open in IMG/M |
3300031640|Ga0318555_10458509 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 691 | Open in IMG/M |
3300031668|Ga0318542_10232821 | All Organisms → cellular organisms → Bacteria | 934 | Open in IMG/M |
3300031682|Ga0318560_10037538 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 2330 | Open in IMG/M |
3300031719|Ga0306917_10224909 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1430 | Open in IMG/M |
3300031719|Ga0306917_11095283 | Not Available | 620 | Open in IMG/M |
3300031744|Ga0306918_10088378 | Not Available | 2175 | Open in IMG/M |
3300031744|Ga0306918_10230715 | Not Available | 1406 | Open in IMG/M |
3300031747|Ga0318502_10684430 | Not Available | 619 | Open in IMG/M |
3300031751|Ga0318494_10087260 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1704 | Open in IMG/M |
3300031753|Ga0307477_10588157 | Not Available | 751 | Open in IMG/M |
3300031754|Ga0307475_11284777 | Not Available | 567 | Open in IMG/M |
3300031768|Ga0318509_10114483 | Not Available | 1465 | Open in IMG/M |
3300031769|Ga0318526_10415672 | Not Available | 550 | Open in IMG/M |
3300031781|Ga0318547_10438992 | All Organisms → cellular organisms → Bacteria | 803 | Open in IMG/M |
3300031781|Ga0318547_10863303 | Not Available | 564 | Open in IMG/M |
3300031781|Ga0318547_10975132 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 529 | Open in IMG/M |
3300031782|Ga0318552_10291390 | Not Available | 829 | Open in IMG/M |
3300031793|Ga0318548_10089443 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 1464 | Open in IMG/M |
3300031794|Ga0318503_10166503 | Not Available | 712 | Open in IMG/M |
3300031805|Ga0318497_10073294 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1803 | Open in IMG/M |
3300031820|Ga0307473_11554328 | Not Available | 503 | Open in IMG/M |
3300031821|Ga0318567_10068986 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1865 | Open in IMG/M |
3300031833|Ga0310917_10235516 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81 | 1230 | Open in IMG/M |
3300031833|Ga0310917_10374024 | Not Available | 968 | Open in IMG/M |
3300031890|Ga0306925_10074253 | All Organisms → cellular organisms → Bacteria | 3581 | Open in IMG/M |
3300031890|Ga0306925_10262230 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1862 | Open in IMG/M |
3300031890|Ga0306925_10576691 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1190 | Open in IMG/M |
3300031897|Ga0318520_10200392 | All Organisms → cellular organisms → Bacteria | 1177 | Open in IMG/M |
3300031910|Ga0306923_11388214 | Not Available | 740 | Open in IMG/M |
3300031910|Ga0306923_11983399 | Not Available | 591 | Open in IMG/M |
3300031912|Ga0306921_10178255 | Not Available | 2491 | Open in IMG/M |
3300031945|Ga0310913_11020211 | Not Available | 579 | Open in IMG/M |
3300031947|Ga0310909_10313427 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1315 | Open in IMG/M |
3300031947|Ga0310909_10657152 | Not Available | 873 | Open in IMG/M |
3300031954|Ga0306926_11829099 | Not Available | 688 | Open in IMG/M |
3300032035|Ga0310911_10310883 | Not Available | 907 | Open in IMG/M |
3300032076|Ga0306924_10484428 | Not Available | 1410 | Open in IMG/M |
3300032091|Ga0318577_10110173 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1294 | Open in IMG/M |
3300032261|Ga0306920_101010649 | Not Available | 1210 | Open in IMG/M |
3300032261|Ga0306920_101198726 | Not Available | 1097 | Open in IMG/M |
3300032261|Ga0306920_101566255 | Not Available | 938 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 27.18% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 22.33% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 20.39% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 16.50% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.88% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.91% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.91% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.97% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.97% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.97% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.97% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
3300001867 | Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705) | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300017993 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3 | Environmental | Open in IMG/M |
3300018032 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG | Environmental | Open in IMG/M |
3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300026817 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes) | Environmental | Open in IMG/M |
3300026871 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes) | Environmental | Open in IMG/M |
3300026872 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes) | Environmental | Open in IMG/M |
3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031549 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24 | Environmental | Open in IMG/M |
3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
3300031668 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23 | Environmental | Open in IMG/M |
3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
3300031751 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24 | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
3300031769 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24 | Environmental | Open in IMG/M |
3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
3300031793 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21 | Environmental | Open in IMG/M |
3300031794 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23 | Environmental | Open in IMG/M |
3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
3300032091 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
AF_2010_repII_A1DRAFT_100006175 | 3300000597 | Forest Soil | MRAVIEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED* |
AF_2010_repII_A1DRAFT_101704491 | 3300000597 | Forest Soil | MRAVTEYRQRARDCRELARMVHKREDRYALDHAAQSWERLAKRCERDIEADAAQPTPHSAAL* |
AF_2010_repII_A001DRAFT_100000756 | 3300000793 | Forest Soil | MGAEDYLMRAVIEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED* |
JGI12627J18819_101767331 | 3300001867 | Forest Soil | MRAVTEYRQRARECRDLARMVDKLEDKYALDCAAQSWERLADRRERDSEAED* |
Ga0066395_100038113 | 3300004633 | Tropical Forest Soil | MRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED* |
Ga0066395_101959523 | 3300004633 | Tropical Forest Soil | MGAEDYSMRAVAEYRDRARECRELARMVHKLEDKYALACAAQSWERLADRRERDTEPEG* |
Ga0066388_1000549523 | 3300005332 | Tropical Forest Soil | MRAVTEYRQRARECRELARMVDKLEDKYALDCAAQSWERLAERREHDIGAED* |
Ga0066388_1002747614 | 3300005332 | Tropical Forest Soil | MRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRE |
Ga0066388_1008709472 | 3300005332 | Tropical Forest Soil | MRAITEYRQRARACRELARMVDKLDDKYALDCAAQSWERLAARSERDIDPED* |
Ga0066388_1013797012 | 3300005332 | Tropical Forest Soil | MGAEDNSMRAVAEYRDRAQECRKLARMVCKLEDKYALDHAAQSWERLADRCSRDIEAED* |
Ga0066388_1027081392 | 3300005332 | Tropical Forest Soil | SMRAVTEYRDRAQECRKLARMVHKLEDKYALDAQSWERLADRREHDIEAED* |
Ga0066388_1032725561 | 3300005332 | Tropical Forest Soil | MRPVTEYRQRARECRELARMVHKLDDKHALDCAAQSWERLADRSEHDIELEDLGPRQATERECH* |
Ga0066388_1033947181 | 3300005332 | Tropical Forest Soil | MGAEESSMRAVTEYRQRARDCRELARMVHTLDDKLALDHAAQSWERLAERCELEADD* |
Ga0066388_1046242882 | 3300005332 | Tropical Forest Soil | MRAVAEYRDRARECRELARMVHKLEDKYALACAAQSWERLADRRERDTEPEG* |
Ga0066388_1059808781 | 3300005332 | Tropical Forest Soil | MRAVTDYRERARECRKLAGMVHKLEDKYALDRAAQSWERLAERRERD |
Ga0066388_1087283201 | 3300005332 | Tropical Forest Soil | MRAVTEYRLRARDCRDLARVVHKLEDKHALDCAAQSWERLADRCERDIDAED* |
Ga0070711_1001771212 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MRAVTEYRDRAQECRKLARMVHKLEDKYALDCAAQSWERLADRRERDIDAEN* |
Ga0066905_1006764973 | 3300005713 | Tropical Forest Soil | MGAEDNSMRALAEYRDRAQECRKLARMVCKLEDKYALDHAAQSWERLADRCSRDIEAED* |
Ga0066903_1009829552 | 3300005764 | Tropical Forest Soil | MRAVTEYRERARECRKLARMVHKLEDKYALDRAAQSWERLAERRERDVEAED* |
Ga0066903_1017732563 | 3300005764 | Tropical Forest Soil | MRAVTEYRDRAQECRKLARIVHRLEDKYALDCAAQSWERLAERYERDIAAED* |
Ga0066903_1063581381 | 3300005764 | Tropical Forest Soil | MRAETEYRDRAQECRKLAKMVHRLEDKYALASAAQSWERLADRCERDIAAED* |
Ga0075014_1003986121 | 3300006174 | Watersheds | MGAEDHSMRTVTEYRDRAQECRKLARMVHKLEDKYALDCAAQSWERLADRRERDIEAED* |
Ga0126374_101304722 | 3300009792 | Tropical Forest Soil | MGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED* |
Ga0126384_105859302 | 3300010046 | Tropical Forest Soil | MGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRRERDTEPEG* |
Ga0126373_101501802 | 3300010048 | Tropical Forest Soil | MGAEDHSMRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRERDFEAED* |
Ga0126373_111796792 | 3300010048 | Tropical Forest Soil | MRAVTEYRDRARECRELARMVHKLEDKYALDSAAHSWERLADRRERDIEAQD* |
Ga0126373_121908101 | 3300010048 | Tropical Forest Soil | MRAVTEYRERARECRKLARMVHKLEDKYALDHAAQSWERLAERSERDIED* |
Ga0126378_106679641 | 3300010361 | Tropical Forest Soil | MRAVTEYRERARECRELARMVHKLEDKYALDHAAQSWERLAERSERDIED* |
Ga0126381_1002078631 | 3300010376 | Tropical Forest Soil | MRAATEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERDIDAED* |
Ga0126375_100821091 | 3300012948 | Tropical Forest Soil | MGAEDNSMRAVAEYRDRAQECRKLARMVCKLEDKYALDHAAQSWERLADRCSRYIEAED* |
Ga0126369_105339263 | 3300012971 | Tropical Forest Soil | RRGMGAEDYSMRAVAEYRDRARECRELSRMVHKLEDKYALDCAAQSWERLADRRERDTEPEG* |
Ga0182041_101022065 | 3300016294 | Soil | MRAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWQRLADRYERDIAAED |
Ga0182035_102922963 | 3300016341 | Soil | MRAVTEYRNRAQECRKLARIVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0182034_109896481 | 3300016371 | Soil | MRAVTEYRQRARDCRELARMVHTLDDKLALDHAAQSWERLAERCE |
Ga0182034_113791731 | 3300016371 | Soil | MRTVTEFRDRAEECRKLARIVCKLEDKYALDHAAKSWERLADRHEREIGAED |
Ga0182037_106441161 | 3300016404 | Soil | RAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0182038_100386821 | 3300016445 | Soil | MRAVIEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0182038_107098963 | 3300016445 | Soil | MRAVTEYRKRAWECRKLASMVHNLEDKYALDHAAQSWERLAA |
Ga0182038_120002501 | 3300016445 | Soil | AVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
Ga0187777_109502911 | 3300017974 | Tropical Peatland | MGAEDYSMRAVTEYRHRALECRRLARMVRSLEDKYALDRAAQSWERLADRHERDVEAED |
Ga0187823_100936442 | 3300017993 | Freshwater Sediment | MRAVTEYRQRARECRELARMVHKLEDKYSLECAAQSWEGLAERRERDIE |
Ga0187788_103880552 | 3300018032 | Tropical Peatland | MRAVTEYGQRARECRELARMVDKLEDKYALDCAAQSWERLAERREHDIEAAD |
Ga0187766_104903231 | 3300018058 | Tropical Peatland | MRAVTEYRHRALECRRLARMVRSLEDKYALDRAAQSWER |
Ga0126371_100497886 | 3300021560 | Tropical Forest Soil | MRPVTEYRQRARECRELARMVHKLDDKHALDCAAQSWERLADRSEHDIELEDLGPRQATERECH |
Ga0126371_105424762 | 3300021560 | Tropical Forest Soil | MRAVTEYRDRARECRELARMVHKLEDKYALDSAAHSWERLADRRERDIEAQD |
Ga0126371_105595272 | 3300021560 | Tropical Forest Soil | MRPVIEYRLRARACRELARMVAKLDDKYALDCAAQSWERLAERRERDIDAED |
Ga0126371_108479772 | 3300021560 | Tropical Forest Soil | MGAEDYSMRAVAEYRDRARECRELARMVHKLEDKYALACAAQSWERLADRRERDTEPEG |
Ga0126371_115095712 | 3300021560 | Tropical Forest Soil | MGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0126371_117720351 | 3300021560 | Tropical Forest Soil | MRAVLEYRDRAKECRELARMVHKLEDKYALDCAAQSWERLADRRERDIDAED |
Ga0126371_123400311 | 3300021560 | Tropical Forest Soil | MRAVTEYRQRARECRELARMVDKLEDKYALDCAAQSWERLAE |
Ga0126371_132572031 | 3300021560 | Tropical Forest Soil | MRAVTEFRLRARQCRVLARMVDRLDDKYALDCAAQSWERLAERRERDIDAED |
Ga0207775_1054552 | 3300026817 | Tropical Forest Soil | HRMRAVTEYRKRAWECRKLASMVHNLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0207825_1145181 | 3300026871 | Tropical Forest Soil | FIYGDGRGDHRMRAVTEYRKRAWECRKLASMVHNLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0207785_10268582 | 3300026872 | Tropical Forest Soil | MRAVTGYRKRAWECRKLASMVHNLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0207862_11634152 | 3300027703 | Tropical Forest Soil | ENHCMRAVTEYRERARARRELARRVHKLEDKYALDRAAQSWERLAKRCERDIEAED |
Ga0209465_1000084412 | 3300027874 | Tropical Forest Soil | MRAVAEYRDRARECRELARMVHKLEDKYALACAAQSWERLADRRERDTEPEG |
Ga0170824_1050233372 | 3300031231 | Forest Soil | MRAVTEYRQRARECRELARMVDKLEDKYALDCAAQSWERLAERREHDIGAEN |
Ga0318516_100083834 | 3300031543 | Soil | MRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0318541_106521181 | 3300031545 | Soil | VVGMGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAE |
Ga0318571_103222231 | 3300031549 | Soil | MGAEDYSMRAVAEYRDRARECRELSRMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0310915_101530222 | 3300031573 | Soil | MRAVAEYRDRARECRELSRMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0310915_112969881 | 3300031573 | Soil | MRAVIEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERD |
Ga0318555_104585091 | 3300031640 | Soil | MRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWER |
Ga0318542_102328212 | 3300031668 | Soil | SMGMGAEMIVCAAVTEYRKRAWECRKLASMVHNLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0318560_100375382 | 3300031682 | Soil | MRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRERDFEAED |
Ga0306917_102249091 | 3300031719 | Soil | NGGICFSVGMGAEIIMRAVIEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERDIDAED |
Ga0306917_110952832 | 3300031719 | Soil | MRAVTEYRQRARDCRELARMVHTLDDKLALDHAAQSWERLAERCELEAD |
Ga0306918_100883786 | 3300031744 | Soil | MRAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0306918_102307152 | 3300031744 | Soil | MGAEESSMRAVTEYRQRARDCRELARMVHTLDDKLALDHAAQSWERLAERCELEADD |
Ga0318502_106844302 | 3300031747 | Soil | MGAEDYSMRAVAEYRDRARECRELARMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0318494_100872602 | 3300031751 | Soil | LMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0307477_105881571 | 3300031753 | Hardwood Forest Soil | CMRAVTEYRDRAQECRKLARMVHKLEDKYALDCAAQSWERLADRRERDIDAEN |
Ga0307475_112847771 | 3300031754 | Hardwood Forest Soil | MRAVTEYRQRARDCRQLSRMVDKLEDKYALDCAAQSWERLA |
Ga0318509_101144835 | 3300031768 | Soil | MRAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDIA |
Ga0318526_104156722 | 3300031769 | Soil | LSRRFHKTDYSMRAVAEYRDRARECRELARMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0318547_104389921 | 3300031781 | Soil | MRAVAEYRDRARECRELARMVHKLEDKYALACAAQSWERLAD |
Ga0318547_108633031 | 3300031781 | Soil | SRRGMGAEDYSMRAVAEYRDRARECRELARMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0318547_109751322 | 3300031781 | Soil | MRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWE |
Ga0318552_102913901 | 3300031782 | Soil | EDYSMRAVAEYRDRARECRELSRMVHKLEDKYALDCAAQSWERLADRRERDTEPEG |
Ga0318548_100894432 | 3300031793 | Soil | MGAEDHSMRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRERDFEAED |
Ga0318503_101665031 | 3300031794 | Soil | MRAVTEYRQRARECRELARMVDKLEDKYALDCAAQSWER |
Ga0318497_100732942 | 3300031805 | Soil | MGAGDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0307473_115543282 | 3300031820 | Hardwood Forest Soil | EDHSMRTVTEYRDRAQECRKLARMVHKLEDKYALDCAAQSWERLADRRERDIDAEN |
Ga0318567_100689861 | 3300031821 | Soil | YLMRAVTEYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRERDFEAED |
Ga0310917_102355162 | 3300031833 | Soil | MGAEIIMRAVIEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERDIDAED |
Ga0310917_103740241 | 3300031833 | Soil | NIFSHGDGRGVHRMRAVTEYRKRAWECRKLASMVHNLEDKYALDHAAQSWERLAARQERDIEAED |
Ga0306925_100742535 | 3300031890 | Soil | MGAEDYSMRAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0306925_102622302 | 3300031890 | Soil | MRAITEYRERARECRELARMVHKLEDKCALDHAAQSWERLAERSERDIED |
Ga0306925_105766912 | 3300031890 | Soil | MRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
Ga0318520_102003921 | 3300031897 | Soil | RAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDIAAED |
Ga0306923_113882144 | 3300031910 | Soil | MRAVTEYRNRAQECRKLARMVHRLEDKYALDCAAQSWERLADRYERDI |
Ga0306923_119833991 | 3300031910 | Soil | MGAEIISMRTVTEFRDRAEECRKLARIVCKLEDKYALDHAAKSWERLADRHEREIGAED |
Ga0306921_101782552 | 3300031912 | Soil | MRAVIEYRKRAWECRKLAIMVHNLEDKYALDCAAQSWERLADRRERDIDAED |
Ga0310913_110202111 | 3300031945 | Soil | LLVVGMGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
Ga0310909_103134273 | 3300031947 | Soil | RKRAWECRKLASMVHNLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0310909_106571521 | 3300031947 | Soil | MRAVTEYRKRAWECRKLASMVHSLEDKYALDCAAQGWERLADRSERDIDAED |
Ga0306926_118290992 | 3300031954 | Soil | AEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
Ga0310911_103108833 | 3300032035 | Soil | RMRAVTEYRKRAWECRKLASMVHNLEDKYALDHAAQSWERLAARQERDIEAED |
Ga0306924_104844282 | 3300032076 | Soil | LMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
Ga0318577_101101732 | 3300032091 | Soil | EYRDRAQECRKLARMVHKLEDKYALDSAAQSWERLADRRERDFEAED |
Ga0306920_1010106491 | 3300032261 | Soil | MRAVTEYRKRAWECRKLASMVHNLEDKYALDHAAQSWERLAARQERDIEAED |
Ga0306920_1011987262 | 3300032261 | Soil | MRPVTEYRQRARECRELARMIRNLDDKHALDCAAQSWERLADRSEHELELED |
Ga0306920_1015662551 | 3300032261 | Soil | MGAEDYLMRAVTEYRDRAQECRKLARLVHRLEDKYALDCAAQRERLADRYERDIAAED |
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