Metagenome / Metatranscriptome Family F099659

Basic Information
Family ID	F099659
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	43 residues
Representative Sequence	QIRGALEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPG
Number of Associated Samples	89
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.35 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (93.204 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.505 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.631 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.14% β-sheet: 0.00% Coil/Unstructured: 52.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00977	His_biosynth	4.85
PF13517	FG-GAP_3	3.88
PF13641	Glyco_tranf_2_3	3.88
PF00072	Response_reg	1.94
PF13620	CarboxypepD_reg	1.94
PF00990	GGDEF	1.94
PF00691	OmpA	1.94
PF02894	GFO_IDH_MocA_C	1.94
PF12679	ABC2_membrane_2	0.97
PF06439	3keto-disac_hyd	0.97
PF13551	HTH_29	0.97
PF13414	TPR_11	0.97
PF02563	Poly_export	0.97
PF02310	B12-binding	0.97
PF07638	Sigma70_ECF	0.97
PF00881	Nitroreductase	0.97
PF13340	DUF4096	0.97
PF01244	Peptidase_M19	0.97
PF00326	Peptidase_S9	0.97
PF13537	GATase_7	0.97
PF00485	PRK	0.97
PF00589	Phage_integrase	0.97
PF02457	DAC	0.97
PF13292	DXP_synthase_N	0.97
PF01435	Peptidase_M48	0.97
PF11737	DUF3300	0.97
PF13545	HTH_Crp_2	0.97
PF11138	DUF2911	0.97
PF01546	Peptidase_M20	0.97
PF00903	Glyoxalase	0.97
PF13472	Lipase_GDSL_2	0.97
PF08281	Sigma70_r4_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	1.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.97
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.58 %
Unclassified	root	N/A	6.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.68 %
Unclassified	root	N/A	6.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.68 %
Unclassified	root	N/A	6.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.68 %
Unclassified	root	N/A	6.80 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.97 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Unclassified	root	N/A	6.80 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	0.97 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Unclassified	root	N/A	6.80 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %
Klenkia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia	0.97 %
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Unclassified	root	N/A	6.80 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
unclassified Klenkia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → unclassified Klenkia	0.97 %
Roseiflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	0.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Unclassified	root	N/A	6.80 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Klenkia sp. PcliD-1-E	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → unclassified Klenkia → Klenkia sp. PcliD-1-E	0.97 %
unclassified Roseiflexus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus	0.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.49 %
Unclassified	root	N/A	6.80 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Roseiflexus sp. RS-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	0.97 %
Klenkia sp. PcliD-1-E	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → unclassified Klenkia → Klenkia sp. PcliD-1-E	0.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1020685	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300004139\|Ga0058897_11120717	Not Available	787	Open in IMG/M
3300004635\|Ga0062388_102918480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	504	Open in IMG/M
3300005177\|Ga0066690_10971720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	536	Open in IMG/M
3300005559\|Ga0066700_10470487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005614\|Ga0068856_100143543	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300005947\|Ga0066794_10098136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300005952\|Ga0080026_10048789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300006050\|Ga0075028_100206205	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300006050\|Ga0075028_101092757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300006052\|Ga0075029_100070873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2049	Open in IMG/M
3300006102\|Ga0075015_100870671	Not Available	545	Open in IMG/M
3300006175\|Ga0070712_100272648	All Organisms → cellular organisms → Bacteria → Acidobacteria	1360	Open in IMG/M
3300006893\|Ga0073928_10792006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300006954\|Ga0079219_11702837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009089\|Ga0099828_10408665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1224	Open in IMG/M
3300009524\|Ga0116225_1094626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1390	Open in IMG/M
3300009525\|Ga0116220_10405508	Not Available	610	Open in IMG/M
3300009552\|Ga0116138_1214374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300009634\|Ga0116124_1046580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300009640\|Ga0116126_1041135	All Organisms → cellular organisms → Bacteria → Acidobacteria	1872	Open in IMG/M
3300009643\|Ga0116110_1015549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3026	Open in IMG/M
3300009644\|Ga0116121_1297551	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300009646\|Ga0116132_1074294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300009700\|Ga0116217_10464796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300009764\|Ga0116134_1129640	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300009824\|Ga0116219_10028454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3382	Open in IMG/M
3300009824\|Ga0116219_10079611	All Organisms → cellular organisms → Bacteria → Acidobacteria	1920	Open in IMG/M
3300009839\|Ga0116223_10449143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300010339\|Ga0074046_10536439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300010379\|Ga0136449_100500023	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300010379\|Ga0136449_103057619	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300010379\|Ga0136449_104026106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300010379\|Ga0136449_104097119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010400\|Ga0134122_12982773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012096\|Ga0137389_11079409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300012986\|Ga0164304_10223394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300012989\|Ga0164305_11699533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300014155\|Ga0181524_10342741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300014200\|Ga0181526_10152787	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300017928\|Ga0187806_1276412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300017938\|Ga0187854_10103864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1329	Open in IMG/M
3300017940\|Ga0187853_10245357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300017940\|Ga0187853_10401817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300017941\|Ga0187850_10403598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300017943\|Ga0187819_10566033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300017946\|Ga0187879_10427952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → unclassified Klenkia → Klenkia sp. PcliD-1-E	734	Open in IMG/M
3300017946\|Ga0187879_10695173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300017996\|Ga0187891_1141766	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300018004\|Ga0187865_1088505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300018017\|Ga0187872_10165866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300018030\|Ga0187869_10519341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300018037\|Ga0187883_10042123	All Organisms → cellular organisms → Bacteria → Acidobacteria	2439	Open in IMG/M
3300018037\|Ga0187883_10451647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300018037\|Ga0187883_10555593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300018038\|Ga0187855_10915405	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300018043\|Ga0187887_10723653	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300018047\|Ga0187859_10680147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300018057\|Ga0187858_10356187	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300018085\|Ga0187772_10493724	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021170\|Ga0210400_10061485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2929	Open in IMG/M
3300021171\|Ga0210405_11127165	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300021178\|Ga0210408_10996490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300021402\|Ga0210385_11584753	Not Available	500	Open in IMG/M
3300021407\|Ga0210383_10003622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13803	Open in IMG/M
3300021407\|Ga0210383_11136099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300021479\|Ga0210410_10019090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5922	Open in IMG/M
3300022557\|Ga0212123_10074510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2905	Open in IMG/M
3300023088\|Ga0224555_1061555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300024225\|Ga0224572_1025178	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300027545\|Ga0209008_1011800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2068	Open in IMG/M
3300027565\|Ga0209219_1103929	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027745\|Ga0209908_10198781	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300027812\|Ga0209656_10404126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027824\|Ga0209040_10391123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300027855\|Ga0209693_10601568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027875\|Ga0209283_10825814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027879\|Ga0209169_10142433	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300027889\|Ga0209380_10233702	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300028666\|Ga0265336_10125429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300028780\|Ga0302225_10191462	Not Available	985	Open in IMG/M
3300028781\|Ga0302223_10244073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300028906\|Ga0308309_11184467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300029882\|Ga0311368_10275264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300029943\|Ga0311340_11456082	Not Available	538	Open in IMG/M
3300029999\|Ga0311339_10090500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3830	Open in IMG/M
3300030007\|Ga0311338_11560648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	606	Open in IMG/M
3300030007\|Ga0311338_11630554	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300030058\|Ga0302179_10257323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300030058\|Ga0302179_10309435	Not Available	696	Open in IMG/M
3300030058\|Ga0302179_10475570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	549	Open in IMG/M
3300030707\|Ga0310038_10087471	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300030739\|Ga0302311_10635366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300030815\|Ga0265746_1008632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300031708\|Ga0310686_103875430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300031753\|Ga0307477_11074136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031754\|Ga0307475_10153355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1830	Open in IMG/M
3300031788\|Ga0302319_10953776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300032160\|Ga0311301_11366826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300032160\|Ga0311301_11831188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300033402\|Ga0326728_11161891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300033798\|Ga0334821_063600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300033887\|Ga0334790_233554	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.19%
Aquatic	Environmental → Aquatic	35.92%
Plants	Host-Associated → Plants	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.66%
Freshwater	Environmental → Aquatic → Freshwater	30.10%
Peat	Environmental → Terrestrial → Peat	15.53%
Sediment	Environmental → Aquatic → Sediment	3.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.53%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.94%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.97%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10206852	3300000546	Quercus Rhizosphere	RGALEGITPLAHPSKNQQSIRVIREEVERIEWALKEILPG*
Ga0058897_111207172	3300004139	Forest Soil	QIRGALDGITPLAHPSKNQQSIRVIREEIDRIESALKEILPR*
Ga0062388_1029184801	3300004635	Bog Forest Soil	ARLNFICARSHHIRGALEGITPLAHPSKNQQSIRVIREEVERIEWAIKEILPG*
Ga0066690_109717201	3300005177	Soil	LNFIWDRNHQIRGALEAITPLAHPSKNQQSIRVIREEVDRIEWALKEILPR*
Ga0066700_104704872	3300005559	Soil	EGIAPSAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0068856_1001435431	3300005614	Corn Rhizosphere	NQIRGALEGITPLAHPSKNQQSIRVIREEVDRIEWAVKEILPG*
Ga0066794_100981362	3300005947	Soil	IWARNHQIRGAVEGISTLAHPLKNQQSIRVIREEVDKIEWALKEILPS*
Ga0080026_100487891	3300005952	Permafrost Soil	NHQIRGALEGITPLAHPSKNQQSIRVIREEVDRIEWALKEILPR*
Ga0075028_1002062051	3300006050	Watersheds	ARNHQIRGALDGITPLAHPLKNQQSIRVIREEVDRIEWALKDILPG*
Ga0075028_1010927571	3300006050	Watersheds	IRGALEGITPVDHPFKNQQSIRVIREEVDRIEWALKEILPG*
Ga0075029_1000708731	3300006052	Watersheds	NFIWARNHQIRGALEAITPLAHPSKNQQSIRVIREEVDRIEWALRLLDAGR*
Ga0075015_1008706712	3300006102	Watersheds	INPLAHPSRNQQSIRVIREEVDRIESALKEILPG*
Ga0070712_1002726481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LKFIWARSNQIRGALEGITPLAHPSKNQQSIRVIREEVDRIEWAVKEILPG*
Ga0073928_107920061	3300006893	Iron-Sulfur Acid Spring	QIRDALEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0079219_117028372	3300006954	Agricultural Soil	GALEGITPLAHPAKNQQSIRVIREEVDRIESVLKQILPR*
Ga0099828_104086651	3300009089	Vadose Zone Soil	FIWDRNHQIRGALEAITPLAHPSKNQQSIRVIREEVDRIEWALKEILPR*
Ga0116225_10946261	3300009524	Peatlands Soil	ITPLAHPAKNQQSIRVIREEVDRIESALKEILTR*
Ga0116220_104055082	3300009525	Peatlands Soil	DRNRQIRDALEGVTPLAHPMKNQQSIRVIREEVDRIESALKEISTR*
Ga0116138_12143741	3300009552	Peatland	QIRGAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG*
Ga0116124_10465801	3300009634	Peatland	GALEGITPMAHPLKNQQSIRVIREEVERIEWALKEILPG*
Ga0116126_10411354	3300009640	Peatland	WARNHHIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0116110_10155491	3300009643	Peatland	IWARNHHIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0116121_12975512	3300009644	Peatland	LEGISPVAHPLKNQQSIRVIREEVDRIEWALKEILPG*
Ga0116132_10742942	3300009646	Peatland	GALEGITPMAHPLKNQQSIRIIREEVDRIEWALKEILPG*
Ga0116217_104647962	3300009700	Peatlands Soil	QIRGALEGITPLAHPAKNQQSIRVIREEVDRIESALKEISTR*
Ga0116134_11296401	3300009764	Peatland	IAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0116219_100284542	3300009824	Peatlands Soil	RGALEAITPLAHPMQNQQSIRVIREEVDRIEWALKEILPS*
Ga0116219_100796111	3300009824	Peatlands Soil	ITPFAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0116223_104491431	3300009839	Peatlands Soil	NFIWARNHQIRGAVEGITPVAHPFKNQQSIRVIREEVDRIEWALKEILPG*
Ga0074046_105364391	3300010339	Bog Forest Soil	RLNFIWARNHHIRGAVEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS*
Ga0136449_1005000231	3300010379	Peatlands Soil	LNFIWARNHHIRGALEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPG*
Ga0136449_1030576191	3300010379	Peatlands Soil	IRGALEGITPMAHPLKNQQSIRVIREEVERIEWALKEILPG*
Ga0136449_1040261061	3300010379	Peatlands Soil	ITPLAHPAKNQQSIRVIREEVDRIEWALKTILPR*
Ga0136449_1040971191	3300010379	Peatlands Soil	IRGALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR*
Ga0134122_129827731	3300010400	Terrestrial Soil	RGALEGIAPSAHPAKNQQSIRVIREEVDRIEWALKEILPRHGS*
Ga0137389_110794091	3300012096	Vadose Zone Soil	KERSASLNFIWDRNHQIRGALEAITPLAHPSKNQQSIRVIREEVDRIEWALKEILPR*
Ga0164304_102233942	3300012986	Soil	FIWARSNQIRGALEGITPLAHPSKNQQSIRVIREEVDRIEWAVKEILPG*
Ga0164305_116995332	3300012989	Soil	WARNHQIRGALEGIAPSAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0181524_103427411	3300014155	Bog	NFIWARNHHIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR*
Ga0181526_101527872	3300014200	Bog	QIRGALEAITPLAHPMQNQQSIRVIREEVDRIEWALKEILPS*
Ga0187806_12764121	3300017928	Freshwater Sediment	HIRGAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0187854_101038641	3300017938	Peatland	IRGAVEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS
Ga0187853_102453571	3300017940	Peatland	QIRGAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0187853_104018171	3300017940	Peatland	LEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0187850_104035982	3300017941	Peatland	WARNHQIRGALEGINTVAHPLKNQQSIRVIREEVDRIELALKEILPS
Ga0187819_105660332	3300017943	Freshwater Sediment	WARNHQIRGALEGITPLAHPVKNQQSIRVIREEVDRIELALKEILSR
Ga0187879_104279521	3300017946	Peatland	AVEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS
Ga0187879_106951731	3300017946	Peatland	IWARNHHIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0187891_11417661	3300017996	Peatland	RGALEGITPMAHPLKNQQSIRVIREEVERIEWALKEILPG
Ga0187865_10885051	3300018004	Peatland	GITPLAHPAKNQQSIRVIREEVDRIELALKEILPS
Ga0187872_101658662	3300018017	Peatland	RGAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0187869_105193411	3300018030	Peatland	HIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0187883_100421231	3300018037	Peatland	GAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0187883_104516472	3300018037	Peatland	ALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0187883_105555931	3300018037	Peatland	IRGALEGISPVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0187855_109154052	3300018038	Peatland	RNHQIRCALEGITPLAHPAKNQQSIRVIREEVDKIEWALKEILPS
Ga0187887_107236531	3300018043	Peatland	QIRGALEAITPLAHPMQNQQSIRVIREEVDRIEWALKEILPS
Ga0187859_106801471	3300018047	Peatland	IWARNHHIRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALNEILPR
Ga0187858_103561871	3300018057	Peatland	IRGALEGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0187772_104937241	3300018085	Tropical Peatland	NFIWARNHHIRGAVEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0210400_100614851	3300021170	Soil	IRGALEAITPLAHPMQNQQSIRVIREEVDRIEWALKEILPS
Ga0210405_111271652	3300021171	Soil	ICDRNRQIRGALEAITPLAHPMQNQQSIRVIREEVDRIEWALKEILPS
Ga0210408_109964902	3300021178	Soil	ERLNFIWARNHHIRGALEGIAPLAHPARNQQSIRVIREEVDRIDWALKEILTR
Ga0210385_115847531	3300021402	Soil	RGALEGITPLAHPSRNQQSIRVIREEVDRIEWVLKEMLTG
Ga0210383_100036229	3300021407	Soil	ALEGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0210383_111360991	3300021407	Soil	RGALEGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0210410_100190908	3300021479	Soil	NFICARNHQIRGALEGLTPLAHPAKNQQSIRVIREEVERIEWALNEILQR
Ga0212123_100745105	3300022557	Iron-Sulfur Acid Spring	ALEGITPLAHPSKNQQSIRVIREEVDRIEWALKEIMPR
Ga0224555_10615551	3300023088	Soil	GISPVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0224572_10251782	3300024225	Rhizosphere	ALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR
Ga0209008_10118001	3300027545	Forest Soil	EGITPLAHPSKNQQSIRVIREEVEKIESALKEILPG
Ga0209219_11039291	3300027565	Forest Soil	QIRGALDGIAPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0209908_101987812	3300027745	Thawing Permafrost	NHQIRGALEGIAPSAHPAKNQQSIRIIREEVDRIERALKDILPR
Ga0209656_104041261	3300027812	Bog Forest Soil	HIRGAVEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS
Ga0209040_103911232	3300027824	Bog Forest Soil	NHHIRGAVEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS
Ga0209693_106015682	3300027855	Soil	NFIFARNHQIRGALGGITPLAHPPKNQQSIRVIREEVERIESALKEILPG
Ga0209283_108258141	3300027875	Vadose Zone Soil	DLNHQIRGALEAITPLAHPSKNQQSIRVIREEVDRIEWALKEILPR
Ga0209169_101424333	3300027879	Soil	VEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPS
Ga0209380_102337021	3300027889	Soil	WDRNHQIRGALEGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0265336_101254291	3300028666	Rhizosphere	LEGITPLAHPAKNQQSIRVIREEVDRIELTLKEILSR
Ga0302225_101914622	3300028780	Palsa	LDGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0302223_102440731	3300028781	Palsa	ARLSFIWARNHQIRGALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR
Ga0308309_111844671	3300028906	Soil	IRGALEGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0311368_102752643	3300029882	Palsa	RNDQIRGALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR
Ga0311340_114560821	3300029943	Palsa	EAITPLAHPSKNQQSIRVIREEVERIEWAIKEILPG
Ga0311339_100905001	3300029999	Palsa	FICARNHQIRGALEAITPLAHPMKNQQSIRVIREEVDRIEWALKEILPR
Ga0311338_115606482	3300030007	Palsa	HRIRGAVEGITPVGHPLKNQQSIRVIREEVDRIEWALKEILPS
Ga0311338_116305542	3300030007	Palsa	NFIWARNHQIRGALEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0302179_102573232	3300030058	Palsa	ARNHQIRGALEAITPLAHPMKNQQSIRVIREEVDRIEWALKEILPH
Ga0302179_103094351	3300030058	Palsa	NHHIRGALEGITPLAHPAKNQQSIRVIREEVERIEWALKEILPR
Ga0302179_104755702	3300030058	Palsa	NFIWARSHKIRGAVEGITPVGHPLKNQQSIRVIREEVDRIEWALKEILPS
Ga0310038_100874711	3300030707	Peatlands Soil	QIRGALEGITPLAHPAKNQQSIRVIREEVDRIESALKEISTR
Ga0302311_106353661	3300030739	Palsa	RNHQIRGALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR
Ga0265746_10086323	3300030815	Soil	IWARNHQIRGALDGIAPTAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0310686_1038754301	3300031708	Soil	ALEGITPLAHPSKNQQSIRVIREEVERIEWALKEILPG
Ga0307477_110741361	3300031753	Hardwood Forest Soil	GALEGITPLAHPAKNQQSIRVIREEVDRIELALKEILSR
Ga0307475_101533553	3300031754	Hardwood Forest Soil	QIRGALAGIMPLAHPAKNQQSIRVIREEVDRIEWALKEILPR
Ga0302319_109537761	3300031788	Bog	QIRGALEGITPLAHPAKNQQSIRVIREEVDRIEWALKEILPG
Ga0311301_113668261	3300032160	Peatlands Soil	VEGITTVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0311301_118311882	3300032160	Peatlands Soil	EGITPVAHPLKNQQSIRVIREEVDRIEWALKEILPG
Ga0326728_111618911	3300033402	Peat Soil	RNHQIRGAVEGIATVAHPLKNQQSIRVIREETDRIEWALKEILPS
Ga0334821_063600_574_732	3300033798	Soil	RLNFIWARNHQIRGAVEGIATVAHPLKNQQSIRVIREETDRIEWALKEILPS
Ga0334790_233554_408_515	3300033887	Soil	GITPLAHPSKNQQSIRVIREEVDRIEWALKEILSR

Hidden Markov Model


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