NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099607

Metagenome / Metatranscriptome Family F099607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099607
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 84 residues
Representative Sequence MALKTRKKRIEAPAITPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGE
Number of Associated Samples 92
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.621 % of family members)
Environment Ontology (ENVO) Unclassified
(22.330 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.660 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.97%    β-sheet: 0.00%    Coil/Unstructured: 71.03%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF13185GAF_2 3.88
PF05977MFS_3 1.94
PF04014MazE_antitoxin 1.94
PF08808RES 0.97
PF13411MerR_1 0.97
PF04734Ceramidase_alk 0.97
PF03720UDPG_MGDP_dh_C 0.97
PF01047MarR 0.97
PF00248Aldo_ket_red 0.97
PF07592DDE_Tnp_ISAZ013 0.97
PF01850PIN 0.97
PF13744HTH_37 0.97
PF02806Alpha-amylase_C 0.97
PF04389Peptidase_M28 0.97
PF09335SNARE_assoc 0.97
PF06505XylR_N 0.97
PF13570PQQ_3 0.97
PF00535Glycos_transf_2 0.97
PF16576HlyD_D23 0.97
PF13610DDE_Tnp_IS240 0.97
PF12680SnoaL_2 0.97
PF00196GerE 0.97
PF00106adh_short 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.94
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.97
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.97
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.97
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.97
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.97
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.97
COG5654Predicted toxin component of a toxin-antitoxin system, contains RES domainDefense mechanisms [V] 0.97


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.62%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.71%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.74%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.91%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.91%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion1.94%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.94%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.97%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.97%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.97%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.97%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.97%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.97%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.97%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.97%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.97%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.97%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.97%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.97%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.97%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001175Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014161Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021976Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1EnvironmentalOpen in IMG/M
3300025316Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025865Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027432Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030851Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032070Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12649J13570_101515713300001175Forest SoilMALKTGTKRIGAPAIGRPRKAKFQADLASAEDRAVRLLKEELQIASNTDFLSDAVALFRWAVSERKLGHRIVSESAGGERKILLFPRLE
JGI12635J15846_1038419423300001593Forest SoilMALKTGTKRIGAPAIGRPRKAKFQADLASAEDRAVRLLKEELQIASNTDFLSDAVALFRWAVSERKLGHRIVSESAGGERKILLF
Ga0062389_10285202913300004092Bog Forest SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGE
Ga0058899_1214518613300004631Forest SoilMRTDSMPARTHKKRIVVSATSRPRKLKFQADLAPADDRTVRALKDELQLAGNTDFLSDALALFQWAVSERKLGNRILSESASGERRVLLFPRLERVAP
Ga0070685_1055718613300005466Switchgrass RhizosphereMALKTKKKRIEVPATSPRRKAKFQADLAPAEDRSVRLLKEELQLTSNSDFLSDAVALFRWAVSERKLGHRIMSESANGERKVLLFPRLERVA
Ga0068858_10247904323300005842Switchgrass RhizosphereMALKTKKKRIEVPATSPRRKAKFQADLAPAEDRSVRLLKEELQLTSNSDFLSDAVALFRWAVSERKLGHRIMSES
Ga0070766_1015211313300005921SoilMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRLVRSLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLERVAPDLVLP
Ga0070765_10003095663300006176SoilMAVKPKRNQPPTARRARNKKFQADLAPAEDRALRALKEDLQVRSNTDFLADAVALFRWAASERKLGHRIISETPGGERKVLVFPRLERVAPE
Ga0066793_1015475833300009029Prmafrost SoilMALKTRKKRIEAPAISPRRKAKFQADLTPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGRRIISESASGERKVLLF
Ga0099830_1123799223300009088Vadose Zone SoilMALKTKKKRTEAPASRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSE
Ga0073936_1069391213300009175Freshwater Lake HypolimnionMALKTQNKRIEAPSIRRLRKTKFQADLAPAEDRTMRLLKEELQLTSNTDFLSDALALFRWAVSERKLGRRIVSE
Ga0105242_1096306713300009176Miscanthus RhizosphereMALKTKKKRIEVPATSPRRKAKFQADLAPAEDRSVRLLKEELQLTSNSDFLSDAVALFRWAVSERKL
Ga0116108_121928413300009519PeatlandMALKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSESASGERRV
Ga0116136_109125023300009547PeatlandVALKTRKKQVEAPVIHRPRKARFQAHLAPAEDSTVRLLKEELQLTSDTDFLSDAVALFRWAVSERKLGHRIVSESASGERKVLVFPRLE
Ga0116138_102425613300009552PeatlandMALKAKSKRIQSPPGKRARKAKFQADLAPAEDHAMRVLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIISENLSGERQVL
Ga0116110_104003323300009643PeatlandMALKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSE
Ga0116106_130252713300009645PeatlandMALKTKRKPIEPTTINRARKAKFQADLALAENRAVRRLKEELQLSSNTDFLSDAVALFQWAVSERKLGRRIISESV
Ga0105856_118844423300009662Permafrost SoilVALKTRKKRIEAPAITQRRKTKFQADLAPAEDRSVRLLKEELQLNSNSDFLSDAVALFRWAVSERKLGHRIMSESASGERKVLLFPRLERVAPDLVLPRVEIKWTGR
Ga0116135_142866923300009665PeatlandMALKTRKKRIEAPAVRPRRKAKFQADLAPAEDRPVRLLKEELQLASNTDFLSDAVALFRWAVSERKLGHRIV
Ga0116217_1052239323300009700Peatlands SoilMAVKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLTSNTDFFSDAIALFRWAVSERKLGHRIVSEGASGERRVLVFPRLERVAPSLALPRV
Ga0134122_1171493523300010400Terrestrial SoilMALKTPKKWIEAPASKPRRKAKFQADLAPAEDRSVRLLKEELQLSSNSDFLSDALALFRWAVSERKLGRRIVSESASGERNVLLFPRLERVAP
Ga0150983_1651553113300011120Forest SoilMPARTHKKRIVVSATSRPRKLKFQADLAPADDRTVRALKDELQLAGNTDFLSDALALFQWAVSERKLGNRILSESASGERRVLLFPRLERVAPTEALPHVQIQ
Ga0137392_1162968513300011269Vadose Zone SoilMALKTRKKRLEAPAISRRRKAKFQADLAPAEDRSVRLLKEELQLTSNTDFLSDALALFRWAVSERKLGHRILSESASGERKVLLFPRLERVAPDVVLPRVEIA
Ga0137391_1012435953300011270Vadose Zone SoilMALKTKKKRIEAPASRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPR
Ga0137389_1169784313300012096Vadose Zone SoilMALKTKKKRIEAPAGRPRRKSKFQADLAPSEDRSVRLLKEELQLSSNTDFLSDAVALFRWAV
Ga0137388_1040732113300012189Vadose Zone SoilMALKTRKKRIEAPAITQRRKTKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERKVLLFPRLERVAPDLAL
Ga0137388_1073515013300012189Vadose Zone SoilMALKTRKKRIEAPPTSPRRKAKFQADLAPAEDRSVRWLKEELQLGSNTDFLSDAVALF
Ga0137388_1170426423300012189Vadose Zone SoilMSLKAKSKGIQSSSNRRPRKAKFQADLAPAEDRTIRLLKEELQLSSNTDFLSDALALFGWAVSE
Ga0137363_1050507223300012202Vadose Zone SoilMALKTRKKRIEARAISRRRKAKFQADLAPAEDRSVRWLKEELQLSSNTDFLSDAVALFRWAVSER
Ga0137378_1148817923300012210Vadose Zone SoilMSLKAKSKGIQPSSNKRPRKAKFQADLAPAEDRTIRLLKEELQLSSNTDFLSDALALFGWAVSER
Ga0137360_1025712313300012361Vadose Zone SoilMALKTRKKRIEAPATSPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGRRIVSE
Ga0137413_1153397323300012924Vadose Zone SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLERVAPDLVLPRVDI
Ga0164301_1128536413300012960SoilMALKNRKKRFDSPAAARPRKTKFQADLAPAEDRSVRLLKQELQLTSNTDFLSDALALFRWAVSERKLGHRIVSES
Ga0153916_1254194613300012964Freshwater WetlandsMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRSVRLLKAELQLSSNTDFLSDAVALFRWAVSERKLGHRIVSESANGERKVLLFPRIERVAPDLAL
Ga0164304_1049757223300012986SoilMALKTRKKKRVESPVTSVRRKTKFQADLAPAEDRTLRLLKDELQLTSNTDFLSDAVALFRWAVSERKLGHRIISESASGGRKVLLFPRLERVAPDLVLP
Ga0181530_1014560523300014159BogMALKIRKKRVEAPAISRPRKSKFQADLAPAEDRTVRLLKKELQLTSNTGFLSDAVALFRWAVSERKLGHRIISESVSGERKVLLFPRLE
Ga0181529_1001902713300014161BogMALKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSESASGERR
Ga0181529_1029849313300014161BogMPPNTKRKRVAAPAVRRARRTKFQADLAPADDRSVRALKKELQLSSNTDFLADAVALYRWAVSERRQGHRIVSESAHGERRVLVFPRLE
Ga0181523_1060565023300014165BogMALKTRKKRIEAPAPSPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMS
Ga0181526_1102990123300014200BogMALKTRKKRIEAPAPSPRRKAKFQADLAPAEDRSLRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLF
Ga0182016_1062722213300014493BogMALKHKTKPSGSPARRPRKTKFQADLAPADDRVVRALKEELQLSSNTDFLSDALALFHWAVSERKLGHRIISENPGGERRVLVFPRLERVAPELSLPRVEIQWT
Ga0182015_1099872013300014495PalsaMAVKPKRIQPATAKRARNTKFQADLAPAEDRALRTLKEDLQLRSNTDFLADAVALFRWAVSERRLGHRIISETPSGERKVLMFPRLERVAPE
Ga0182024_1215041313300014501PermafrostMALKTKKKRIEAPASKLRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSER
Ga0182027_1164720323300014839FenMAFKATSKKTQSPPGKRTRKAKFQADLAPAEDRSMRVLKAELELTSNTDFLSDALALFRWAVSERKLGHRIVSESVSGERRVLVFPRLERVAPDASLPRVEIQWT
Ga0137409_1063467923300015245Vadose Zone SoilMALKAKSKAIQTSSNKRARKSKFQADVAPAEDRTIRLLKEELQLSSNTDLLSDALALFGWAVSERR
Ga0187879_1034413913300017946PeatlandMALKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSESASGERRVLVFP
Ga0187781_1133758613300017972Tropical PeatlandMTVKPKRKRVEAQRPRKAKFQADLAPAQDRTVRLLKEELQVTSNTDFLSDAVAFFRWAVSERRLGHRIVSESASGERKVLVFPRLELVAPDLALPRVEIR
Ga0187781_1144924613300017972Tropical PeatlandMPLREKKKREPAPESKRARKTKFQADLAPAEDRTVRLLKQELQLSSNTAFFSDAVALFRWAVSERKLGRCIVSESATGDRRVLVFPRLERVAPEVALPRV
Ga0187859_1007551723300018047PeatlandMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFP
Ga0210406_1095264113300021168SoilVALKTRKKRIEAPAITPRRKAKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGRRIM
Ga0210387_1091653313300021405SoilMALKTRKKRIEAPAPSPRRKAKFQADLAPAEDRSLRLLKEELQLSSNTDFLSDAVALFRWAVS
Ga0210394_1042038333300021420SoilMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLERVAPDLVLPRVDIK
Ga0187846_1045931113300021476BiofilmMALKTRRKRVEAPRRRKAKFQADLAPAEDRTVRLLKEELQLASNSDFLSDAVALFRWAVSERRLGHRIVSES
Ga0210398_1039091923300021477SoilMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRLVRSLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIVSESASGERNVLLFPRLERVAPDLVLPRVEIKW
Ga0210409_1153861013300021559SoilMALKTRKKRIEASAINRRRKAKFQADLAPADDRTVRLLKEELQVASNSDFLSDALALFWWAVSERKSGHRIVSESASGERK
Ga0193742_103436813300021976SoilMALKTRKKRIEAPAISRPRKAKFQADLAPAEDRALRLLKDELQLTSNTDFLSDAVALFRWAVSERKLGHRIVSESANGERKVLLFPRLERV
Ga0209697_1049479923300025316Freshwater Lake HypolimnionMALKTQNKRIEAPSIRRLRKTKFQADLAPAEDRTMRLLKEELQLTSNTDFLSDALALFRWAVSERKLGRRIV
Ga0208039_103479923300025454PeatlandMALKAKSKRIQSPPGKRARKAKFQADLAPAEDHAMRVLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIISENLSGERQV
Ga0208686_109837913300025500PeatlandMALKTRKKQVEAQAVNRPRKAKFQADIAPAEDRTVRLLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSESASGERRVLVFPRLERVAPD
Ga0209226_1033450713300025865Arctic Peat SoilMALNTRKKRIEAPAISRRRKAKFQADLAPAEDRSLRLLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIVSESASGERKVLLFPRL
Ga0209540_1065705623300025888Arctic Peat SoilMALNTRKKRIEAPAISRRRKAKFQADLAPAEDRSLRLLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIVSESASGE
Ga0207692_1051821113300025898Corn, Switchgrass And Miscanthus RhizosphereMALKTRKKRIETPAITQRRKTKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERKV
Ga0209647_107397723300026319Grasslands SoilMTSKVRNNKLIQAPSSKRPRKAKFQADLAPAEDRTMRALKEELQLTSNTDFLSDALALFHWAVSERKQGNRIISESANGERRVLVFPRLERVAPEAVLP
Ga0257147_100169323300026475SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHR
Ga0209648_1081098323300026551Grasslands SoilMSLKAKGKGIQSSPNKRPRKAKFQADLAPAEDRTIRLLKEELQLSSNTDFLSDALALFGWAVSERKQGHRIISESDSGERRVLVFPRLERVA
Ga0209421_110897113300027432Forest SoilMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRMVGAKS
Ga0209115_114038823300027567Forest SoilMALKTKKKQVETQTSRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRMVGAKS
Ga0209106_114711813300027616Forest SoilMALKTRKKRIEAPATSPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERKVLLFPRLERVAPDLVLPRVEIKWTG
Ga0209908_1010193913300027745Thawing PermafrostMAQKTGAKRIEAPAIGRPRKTKFQADLAPAEDRAVRLLKEELQIASNTDFLSDAVALFRWAVSERKLGHKIVSESASGERKILLLSLI
Ga0209169_1028521823300027879SoilMALKTKKKRVETPASRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESATGQRNVLLFPRLERVAPD
Ga0209488_1030643513300027903Vadose Zone SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLERV
Ga0209698_1018321113300027911WatershedsMASRASKKPVEARGISRPRKAKFQADLAPAEDRTVRLLKQELQLTSNTDFLSDAVALFRWAVSERKLGHKIVSESASGDRSVLVFPRLE
Ga0209079_1015452223300027972Freshwater SedimentMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRSVRLLKAELQLSSNSDFLSDAVALFRWAVSERKLGHRIVSESANGERTVLLFPRIERV
Ga0209526_1052144723300028047Forest SoilMALKTRKKRIEAPAITQRRKTKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKF
Ga0209526_1071796713300028047Forest SoilMASKTRKKRIEAAPNSRPRKAKFQADLAPAEDRTVRLLKEELQLTSNTDFLSDAVALFRWAVSERKLGHRIVSESTRGERNVLLFPRLERVAPDIALPRV
Ga0302225_1024383523300028780PalsaMALKTRKKRIEAPAVRPRRKAKFQADLAPAEDRPVRLLKEELQLASNTDFLSDAVALFRWAVSERKLGHRIVSESASGEHKVLLFPRLERVA
Ga0302222_1043198013300028798PalsaMAVKTKKKRIEAPAPGPRRKSKFQADLAPAEDRSLRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERHVLLFPRLERVAPGL
Ga0222749_1072424013300029636SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRI
Ga0311369_1101292413300029910PalsaMALKTRKKRIEAPAVRPRRKAKFQADLAPAEDRPVRLLKEELQLASNTDFLSDAVALFRWAVSERKLGHRIVSESASGEHKVLLFPRLERVAPDLVM
Ga0311359_1060873013300029914BogMPTNTKRKRTAASAVPRARRTKFQADLAPAEDRTVRALKADLQLSSNTDFLSDAVALYGWAVSERKQGHRIVSESADGERRILVFPRLERVAPES
Ga0311340_1027509213300029943PalsaMAQKTGAKRIEAPAIGRPRKTKFQADLAPAEDRAVRLLKEELQIASNTDFLSDALALFRWAVSERKLGHKIVSESASGERKILLFPRLER
Ga0311339_1137423113300029999PalsaMALKTRKKRIEAPAVRPRRKAKFQADLAPAEDRPVRLLKEELQLASNTDFLSDAVALFRWAVSERKLGHRIVSESASGEHKVLLF
Ga0075380_1091785013300030851SoilMALKTRKKRIEAPAPSPRRKAKFQADLAPAEDRSLRLLKEELQLSSNTDFLSDAVALFRWAVSE
Ga0170823_1393757143300031128Forest SoilMALKTKKKRIEDPASRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSER
Ga0302325_1203947913300031234PalsaMARITKNKTKEAPPRKQIRKSKFQADLAPSEDSMVRALKTELQLTSNTDFLSDALALFRWAVSERKRGHRIVSESATGERRILVFPHLERVAPELAL
Ga0302325_1300433413300031234PalsaMQVKTRKKRTETQAVKPPRKAKFQADLAPAEDRIVRSLKAELQLMSNTDFFSDAIALFRWAVSERKLGHRIVSESQSGE
Ga0302324_10087390313300031236PalsaMALKTKKKQTEAPASKPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLER
Ga0302324_10151091723300031236PalsaMAVKSRSKKSEPLPTRLRKTKFQADLAPADDRMVRALKDELQLNSNSDFLCDALALFRWAVSERKLGHRIVSETLE
Ga0302324_10241122613300031236PalsaMALKTRKKRIEAPATSPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFPRLER
Ga0310686_10403614813300031708SoilMALKTKIKRIEAPASRQRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIMSESASGERNVLLFP
Ga0310686_10472803013300031708SoilMALKTKKKRIEAPASKPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSE
Ga0310686_11584714433300031708SoilMALKTKKKRIEDPASRPRRKSKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRW
Ga0307477_1116869813300031753Hardwood Forest SoilMALKAKRKRTEGRQLRKTKFQADLAPAEDRTVRMLKEELQLSSNTDFLCDAVALFRWAVSERKLGHRIVSESVSGDRKVLVFPRLERVAPDVMLPRVDIKW
Ga0302322_10394840113300031902FenMRIQKKLLAKPATGRPRKTKFQADLAPAEDRTVRLLKEELQLASNTDFLSDAVALYRWAVSERRLGHRIVSESVSGERKVL
Ga0307479_1132607723300031962Hardwood Forest SoilMALKAKKKRVEARRPRKTKFQADLAPAEDRTVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIVSESVSGDRKVLVF
Ga0315279_1055521113300032070SedimentMALKTRKKRIEAPAIGPRRKAKFQADLAPAEDRSMRLLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIVSESASGERRVLLFPRL
Ga0311301_1076243823300032160Peatlands SoilMISKNRRKRIEAATSKHPRKAKFQADLAPAEVRTMRALKDELQLTSNTDFLSDALVLFHWAVS
Ga0311301_1203961223300032160Peatlands SoilMGQYPMPRRAQKKRIDVSTGSRARKAKFQADLAPADDGAVRALKAELQLASNTDFLSDAVALFRWAVSERKLGNR
Ga0315281_1041893523300032163SedimentMALKTRKKRIEAPAIGPRRKAKFQADLAPAEDRSMRLLKEELQLTSNTDFLSDALALFRWAVSERKLGHRIVSESAS
Ga0326728_1116711513300033402Peat SoilMALKARKKQVEAQAVNRPRKAKFQADIASAEDRTVRLLKAELQLTSNTDFFSDAIALFRWAVSERKLGHRIVSEGAS
Ga0326727_1007003613300033405Peat SoilMALKSRQPKKTIQVPRTRRKSKFQADLAPAEDQMVRGLKRELQLNSNTDFLSDAVALFRWAVGERKRGYRI
Ga0326726_1109583323300033433Peat SoilMALKTRKNRIEAPTVSPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDAVALFRWAVSERKLGHRIVSESASGERKVLLFPRLERVAPDLVMP
Ga0316620_1216344713300033480SoilMALKTRKKRIEAPAITPRRKAKFQADLAPAEDRSVRLLKEELQLSSNTDFLSDALALFRWAVSERKLGHRIVSESANGERRVLLFPRLERVAPDLVLPRV


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