Metagenome / Metatranscriptome Family F099606

Overview

Basic Information

• Family ID: F099606
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 103
• Average Sequence Length: 66 residues
• Representative Sequence: MHPPVRYITWLIEKNLVPGAIVILHDGISDPTRSIQALPHILTVGRKRGLRFVSIGALVREAAEHFEAS
• Number of Associated Samples: 93
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 3.88 %
• % of genes from short scaffolds (< 2000 bps): 4.85 %
• Associated GOLD sequencing projects: 89
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (95.146 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.359 % of family members)
• Environment Ontology (ENVO): Unclassified (33.010 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (45.631 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 43.30%
  β-sheet: 0.00%
  Coil/Unstructured: 56.70%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01522	Polysacc_deac_1	6.80
PF08592	Anthrone_oxy	5.83
PF03060	NMO	3.88
PF08448	PAS_4	2.91
PF13376	OmdA	1.94
PF13413	HTH_25	1.94
PF15580	Imm53	1.94
PF02518	HATPase_c	1.94
PF13692	Glyco_trans_1_4	0.97
PF13490	zf-HC2	0.97
PF13185	GAF_2	0.97
PF06580	His_kinase	0.97
PF13424	TPR_12	0.97
PF13683	rve_3	0.97
PF00069	Pkinase	0.97
PF01548	DEDD_Tnp_IS110	0.97
PF13231	PMT_2	0.97
PF04892	VanZ	0.97
PF13365	Trypsin_2	0.97
PF01810	LysE	0.97
PF03435	Sacchrp_dh_NADP	0.97
PF02371	Transposase_20	0.97
PF04134	DCC1-like	0.97
PF01741	MscL	0.97
PF14403	CP_ATPgrasp_2	0.97
PF13857	Ank_5	0.97
PF00756	Esterase	0.97
PF00294	PfkB	0.97
PF13495	Phage_int_SAM_4	0.97
PF00106	adh_short	0.97
PF13911	AhpC-TSA_2	0.97
PF01925	TauE	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	6.80
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	3.88
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	3.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.94
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.97
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.97
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.97
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
All Organisms	root	All Organisms	4.85 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
cellular organisms	root	All Organisms → cellular organisms	4.85 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.85 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.94 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002245|JGIcombinedJ26739_101267819	All Organisms → cellular organisms → Bacteria	627
3300005177|Ga0066690_10420237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907
3300012202|Ga0137363_10132465	All Organisms → cellular organisms → Bacteria	1938
3300020140|Ga0179590_1146033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646
3300024288|Ga0179589_10260668	All Organisms → cellular organisms → Bacteria	772

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.44%
Host-Associated	Host-Associated	14.56%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.50%
Plants	Host-Associated → Plants	14.56%
Aquatic	Environmental → Aquatic	1.94%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Roots	Host-Associated → Plants → Roots	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Sediment	Environmental → Aquatic → Sediment	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.84%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_02491461	3300000033	Soil	DPIHPPVWYIRWWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVXQLDRATISDAL*
INPhiseqgaiiFebDRAFT_1005912612	3300000364	Soil	LIEKNLVPGAIVILHDGIPDPTRGIQALPHILAAGRQRGLRFVSIGALMRGAVEQVDAVDEALPP*
JGI11643J11755_113192041	3300000787	Soil	TAKNLAPGAIVILHDGISDPSRSIAALPAILAAGQRKGLQFVSVGTLMAGSGDGG*
JGI12630J15595_101280631	3300001545	Forest Soil	PPLWYICWLVKKNLAPGTIVILHDGISNPTQTIRALPQILTAAHRKGLRIVSIATLKASANQRHAT*
JGIcombinedJ26739_1012678192	3300002245	Forest Soil	AYPHDPMHPPVWYIRWLVKKNLAPGTIVILHDGISNPTRSIHALPQILTAGHRKGLRFVSIAALRANCG*
JGI25617J43924_100047612	3300002914	Grasslands Soil	MHPPVWYIRWLIEKNLVPGAIVILHDGIRDASRSIQALPHILNAGRARGLRFVSIGGLLREAGAIDLGIGNA*
Ga0062593_1031178741	3300004114	Soil	NARVHGSAYANDPTHPPVCYIRCWIEKNLVPGAIIILHDGISDPRRGIQALPHILAAGIQKGLRFVSVGALMRGAVEQMGTASTSDNL*
Ga0066690_101412482	3300005177	Soil	MHPPVRYIRWLIGKNLVPGAIIILHDGISDPTRSIQALPHILTLGREKGLRFVSIGALVREAAEPVEVS*
Ga0066690_104202372	3300005177	Soil	YIRWVVEKNLVPGAIVILHDGIPDPSRSLQALPHILEVGRRKGLRFVSISELFRSATP*
Ga0065712_100099973	3300005290	Miscanthus Rhizosphere	NLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL*
Ga0065715_105763083	3300005293	Miscanthus Rhizosphere	SAYANDPIHPPVWYIRGWIEKNLLPGAIVILHDGISDPTRTIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL*
Ga0070675_1009908091	3300005354	Miscanthus Rhizosphere	NLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVDQLDRATISDAL*
Ga0070710_106721082	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VWYIRWLVEKNLVPGTIVILHDGISDLTRSIEALPHILDTGRRRKLKFVSIGELRAASRRA*
Ga0066682_104087522	3300005450	Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSI
Ga0070695_1011341081	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALLREAAKPAKQADDA*
Ga0066692_103454602	3300005555	Soil	PPVWYMRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVTEAARPVETS*
Ga0066670_100375421	3300005560	Soil	WLIEKNLAPGTIVILHDGIANPKRSIAALPQILAAGRKKGLRFVSIGELRRRSGGQGE*
Ga0070664_1014748403	3300005564	Corn Rhizosphere	WYIRGWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVDQLDRATISDAL*
Ga0066705_100299785	3300005569	Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVTEAARPVETS*
Ga0066651_100473993	3300006031	Soil	YPHDPMRPPVWYIRWLIEKNLAPGTIVILHDGIANPKRSIAALPDILAEGRKKGLRFVSIGELRRSGGVAAGRVALSG*
Ga0070765_1000337274	3300006176	Soil	MHPPAWYIRWLVEKNLAPGTIIILHDGISDATRGIKALPHILDAGRQRGVRFVSIGELMGASNKERKK*
Ga0075422_105506111	3300006196	Populus Rhizosphere	PIHPPVWYIRGWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL*
Ga0068871_1000822671	3300006358	Miscanthus Rhizosphere	PPVWYMRWLVQKNLVPGTIVILHDGISNPARTLKALPLILAEGRRRGFSFVSIGELMQRGRFPDEQ*
Ga0075434_1006071461	3300006871	Populus Rhizosphere	GAIVILHDGISDPTRSIEALPAVLAEGRRRGFRFVSIGELMREGTGRRPADAMKGESP*
Ga0075435_1002939602	3300007076	Populus Rhizosphere	YANDPIHPPVWYIRGWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL*
Ga0075418_100774892	3300009100	Populus Rhizosphere	VSYIQWLIEKNLVPGAIVILHDGISNPRKSIQALPHLLATGKQRGIRFVTVGELLRER*
Ga0099792_100459081	3300009143	Vadose Zone Soil	HDPIRPPVWYMRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGSSS*
Ga0075423_113068561	3300009162	Populus Rhizosphere	AYANDPIHPPVWYIRWRIERNLVPGSIIILHDGISDPRRGIEALPHILATGAQNGLRFTSIGALMRGANTITTTETEVPT*
Ga0126373_115408481	3300010048	Tropical Forest Soil	MTWLIEKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETR
Ga0126373_116664691	3300010048	Tropical Forest Soil	PVRYITWLIEKNLVPGAIVILHDGISNPTRSIQALPHILTVGRKRGLRFVSIGALVKEAAQHVEGTRLARCPLS*
Ga0134109_102105851	3300010320	Grasslands Soil	MHPPVWYIRWLIEKNLAPGTIVILHDGIANPERSIAALPQILAAGRKKGLRFVSIGELMGRR*
Ga0134067_100517191	3300010321	Grasslands Soil	WLIGKNLVPGAIVILHEGISDPTRTIQALPHILTAGHQRRLRFVSIGALMRGATEQVEST
Ga0134111_104123311	3300010329	Grasslands Soil	MRPPVSYIRWLIEKNLAPGTIVILHDGIANPKRSIAALPDILAEGRKKGLRFVSIGELRRSGGVAAGRVALSG*
Ga0134062_105754891	3300010337	Grasslands Soil	MRPPVWYIRWLIEKNLAPGTIVILHDGIANPKRSIAALPDILAEGRKKGLRFVSIGELRRSGGVAAGRVALSG*
Ga0126376_117982651	3300010359	Tropical Forest Soil	IEKNLVPGAIVILHDGISDPSRSLEALPHILEAARGKGLRLVSIGELIHNT*
Ga0126378_102566263	3300010361	Tropical Forest Soil	MHPPAWYMTWLIEKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANR
Ga0126378_132418302	3300010361	Tropical Forest Soil	YIRWLVAKNLVPGAIVILHDGISDPSRSIEALPYILEAGCQKGLRFVSISELFRAAGRTGAT*
Ga0134066_102818991	3300010364	Grasslands Soil	HDPMRPPVSYIRWLSEKNLAPGTIVILHDGIANPKRSIAALPDILAEGRKKGLRFVSIGELRRSGGGRRGE*
Ga0126383_102905493	3300010398	Tropical Forest Soil	CAYPHDPMHPPVWYIRWLIEKNLAPGTIVILHDGISNPSRSIAALPHILSTGRQRGLRFVPIGELMSSDLNRNG*
Ga0137392_107465491	3300011269	Vadose Zone Soil	MHPPVWYIRWLIEKNLVPGTIIILHDGISDATRSIRALPHILMEGRRRGLKFVSAGELMNTFGGAKQES*
Ga0137383_100075829	3300012199	Vadose Zone Soil	MHPPVRYIRWLIGKNLVPGAIIILHDGISDPTRSIQALPHILALGREKGLRFVSIGALVREAAEPVEVS*
Ga0137383_110311551	3300012199	Vadose Zone Soil	HDPMHPPVRYITWLIEKNLVPGAIVILHDGISEPTRSIQALPHILTVGRKKGLRFVSIGALMREAAEHVEGS*
Ga0137363_101324652	3300012202	Vadose Zone Soil	MHPPVQYITWLIEKNLVPGAIVILHDGISDPTRSIQALPHILTVGSQRGLRFVSIGALVREAAEHVEAS*
Ga0137363_101471923	3300012202	Vadose Zone Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGQRKQAD*
Ga0137363_117532752	3300012202	Vadose Zone Soil	AYPHDPIRPPVWYMRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGSSS*
Ga0137399_103393821	3300012203	Vadose Zone Soil	LVGKNLVPGTIVILHDGISDPSRSIEALPHVLTAGRKKGLRFTSIGALVREAAGQRKQAD
Ga0137362_101456602	3300012205	Vadose Zone Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVTEAARPAETS*
Ga0137378_104853593	3300012210	Vadose Zone Soil	MHPPVWYITWLIEKNLVPGAIVILHDGISDPTRSLRALPHILTVGRKKGLRFVSIGALLREAAEHVEGT*
Ga0137384_100736964	3300012357	Vadose Zone Soil	WYITWLIEKNLVPGAIVILYDGISDPTRSLRALPHILTVVRMKGLRFVSIGALLREAAEHVEGT*
Ga0137360_101070121	3300012361	Vadose Zone Soil	HDPIRPPVWYMRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGQRKQAD*
Ga0137360_113557632	3300012361	Vadose Zone Soil	YMRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVTEAARPAETS*
Ga0137390_116839572	3300012363	Vadose Zone Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVRAAAGPAETS*
Ga0157339_10362431	3300012505	Arabidopsis Rhizosphere	KNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSVVEQLDRATISDAL*
Ga0137358_110667392	3300012582	Vadose Zone Soil	LHPPVWYIRWLVKKSLAPGAIVILHDGISNPTRTLQALPKILTAAHRKGLRVISISALRRAADQPDAK*
Ga0137398_100344121	3300012683	Vadose Zone Soil	MHPPVRYITWLIEKNLVPGAIVILHDGISDPTRSIQALPHILTVGRKRGLRFVSIGALVREAAEHFEAS*
Ga0137396_109949481	3300012918	Vadose Zone Soil	DPIRPPVWYIRWLVGKNLVPVTIVILHDGISDSSRSIEALPHILTAGRKKGLRFTSIGALVREAAGPAETS*
Ga0137359_106207472	3300012923	Vadose Zone Soil	MRWLVGKNLVPGTIVILHDGITDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGQRKQAD*
Ga0137407_116683531	3300012930	Vadose Zone Soil	PPVWYITWLIEKNLVPGAIVILHGGISDPTRSIRALPHILTVGRKRGLRFVSIGALIMREAAEHVEAS*
Ga0164299_100047021	3300012958	Soil	MCVLGSAYANDPIHPPVWYIRGWIEKNLLPGAIVSLHDGISGPTRTIQALPHILAAGRQKGLRFISVG
Ga0126369_109143342	3300012971	Tropical Forest Soil	RWWIEKNLVPGAIIILHDGISDPRRGIEALPHILATGAQNGLRFTSIGALMREAVEQVGMAR*
Ga0126369_125941362	3300012971	Tropical Forest Soil	GCAYPHDPMRAPVWYIRWLVGKNLVPGAIVILHDAIRDAKRSLRALPHILAAGQKKGLRFVPIGKLMNACRLKQG*
Ga0157373_102523331	3300013100	Corn Rhizosphere	KNLLPGAIVILHDGISDPTRTIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL*
Ga0134079_100973692	3300014166	Grasslands Soil	PPVWYIRWLIEKNLAPGTIVILHDGIANPKRSIAALPDILAEGRKKGLRFVSIGELRRSGGGRRGE*
Ga0163163_128921551	3300014325	Switchgrass Rhizosphere	RVHGSAYANDPTHPPVCYIRCWIEKNLVPGAIIILHDGISDPRRGIQALPHILAAGIQKGLRFVSVGALMRGAVEQMGTASTSDNL*
Ga0182015_105261911	3300014495	Palsa	YIRWLIEKNLAPGTIVILHDGIPDPTRAIQALPHILAEGRKRGLTFVSIGELLAAREPPK
Ga0137420_10591901	3300015054	Vadose Zone Soil	FWVVPIRMTPFDDPIRPPVWYIRWLVGKNLVPGTIVILHDGISDPSRSIEALPHVLTAGRKKGLRFTSIGALVREAAGQRKQAD*
Ga0173483_107093832	3300015077	Soil	LRPPVGYIRWLVQKNLRPGTIVILHDGIADPAHTLLALPPILAEGRRRGLCFVSIGELMQQSKKPE*
Ga0180093_10804032	3300015258	Soil	HPPVWYIEWLIEKNLAPGTIVILHDGIPDPSRGIAALPHILATGRERGLRFVSIGTLMAAATP*
Ga0182032_101814551	3300016357	Soil	KNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETRG
Ga0187806_12264672	3300017928	Freshwater Sediment	RWLIEKNLVPGTIIILHDGISDPKRSIEALPHILAAGKSRGLSFVSIGELESLSRKAHG
Ga0066655_107977971	3300018431	Grasslands Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVTEAARPVETS
Ga0206350_104358942	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVDQLDRATISDAL
Ga0179590_11460332	3300020140	Vadose Zone Soil	HGPIHPPVWYITWLIEKNLVPGAIVILHDGISDPTRSIRALPHILSVGRKRRLRFVSIGALTREAAEHVEGT
Ga0210390_103083121	3300021474	Soil	YPHDPAHPPLRYIRWLIEKNLAPGTIVILHDGIPDPTRAIQALPHILAEGRKRGLTFVSIGELLAAREPPK
Ga0210409_1000435111	3300021559	Soil	VSYIRWLVTKNLAPGTIVILHDGISNPTRSIQALPQILVAGCREGLRFVSIGALRAAAEQRDAT
Ga0179589_102606682	3300024288	Vadose Zone Soil	CAYPHDPIHPPVWYITWLIEKNLVPGAIVILHDGISDPTRSIRALPHILSVGRKRRLRFVSIGALTREAAEHVEGT
Ga0207680_113352222	3300025903	Switchgrass Rhizosphere	PPVWYIRWWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL
Ga0207685_106031852	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	DPTHPPVCYIRCWIEKNLVPGAIIILHDGISDPRRGIQALPHILAAGIQKGLRFVSVGALMRGAVEQMGTASTSDNL
Ga0207690_101332802	3300025932	Corn Rhizosphere	PPVWYIRGWIEKNLLPGAIVILHDGISDPTRSIQALPHILAAGRQKGLRFISVGALMRSAVEQLDRATISDAL
Ga0209131_11875551	3300026320	Grasslands Soil	MRWLVGKNLVPGTIVILHDGISDPSRSIEALPHILTAGRKKGLRFTSIGALVREAAGPAETS
Ga0209473_12324091	3300026330	Soil	TCVLGCAYPHDPVHPPVWYIRWVVEKNLVPGAIVILHDGIPDPSRSLQALPHILEVGRRKGLRFVSISELFRSATP
Ga0209648_100066528	3300026551	Grasslands Soil	MHPPVWYIRWLIEKNLVPGAIVILHDGIRDASRSIQALPHILNAGRARGLRFVSIGGLLREAGAIDLGIGNA
Ga0209648_103657131	3300026551	Grasslands Soil	MRWLIGKNLVPGAIVILHDGISDPTRSIQALPHILTVGRKKGLRFISIGALIREAAEPVETGLLIPSG
Ga0209729_10466602	3300027061	Forest Soil	VEKNLVPGTIVILHDGISDLTRSIEALPHILDTGRRRKLKFVSIGELRAASRKA
Ga0209115_10832731	3300027567	Forest Soil	WLITKNLAPGAIVILHDGIDEASGAIRVLPEILEEGRKRGLRFVSIGELIEAH
Ga0209217_10209711	3300027651	Forest Soil	PMHPPVWYIRWLVKKNLAPGTIVILHDGISNPTRSIHALPQILTAGHRKGLRFVSIAALRANCG
Ga0302219_100036124	3300028747	Palsa	HPPLQYIRWLIEKNLAPGTIVILHDGIPDPTRAIQALPHILAEGRKRGLTFVSIGELLAAREPPK
Ga0308309_100016984	3300028906	Soil	MHPPAWYIRWLVEKNLAPGTIIILHDGISDATRGIKALPHILDAGRQRGVRFVSIGELMGASNKERKK
Ga0170834_1083128531	3300031057	Forest Soil	PVRYITWLIEKNLVPGAIVILHDGISDPTRSIQALPHILTVGRKRGLRFVSIGALVSEAAEHLEAC
Ga0318571_100986233	3300031549	Soil	YIRWLIKKNLAPGGIVILHDGIPDASRSIAALPQILGDGSERGLTFVSIGQLIARAL
Ga0307474_102292521	3300031718	Hardwood Forest Soil	WYIRWLVEKNLVSGTIVILHDGISDATRSIEALPHILETARRRKLKFVSIGALRAASRKAQPKTM
Ga0318493_104038082	3300031723	Soil	PAWYMTWLIEKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETRG
Ga0318546_109062631	3300031771	Soil	MRYMKWLIEKNLVPGAIITLHDGISDPARSIRTLPDILTVGRKRGLRFVSIGALMKEARCRCVDRL
Ga0318517_104856421	3300031835	Soil	HPPAWYMTWLIEKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETRG
Ga0306925_122886351	3300031890	Soil	LIEKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETRR
Ga0310916_106619731	3300031942	Soil	LRPPVWYIRWLIKKNLAPGGIVILHDGIPDASRSIAALPQILGDGSERGLTFVSIGQLIARAL
Ga0310916_114648911	3300031942	Soil	LFVKNLVPGTIVILHDGISDATRSIRALPQILRTGRQRGVRFVPIGELMKANRETRG
Ga0326597_106150691	3300031965	Soil	PYDGGHPPVWYIQWLVEKNLAPGTIVILHDGIPDPRRSLAALPHILATGRERGLRFVSIGALLQAAERESN
Ga0318531_104943881	3300031981	Soil	MRYMKWLIEKNLVPGAIITLHDGISDPARSIRTLPDILTVGRKRGLRFVSIGALMKEARC
Ga0306922_101173277	3300032001	Soil	WYMTWLIEKNLVPGTIVILHDGISDATRSIRALPQILQTGRQRGVRFVPIGELMKANRETRG
Ga0310897_102760032	3300032003	Soil	VCYIRCWIEKNLVPGAIIILHDGISDPRRGIQALPHILAAGIQKGLRFVSVGALMRGAVEQMGTASTSDNL
Ga0310902_100563901	3300032012	Soil	IRWLVSKNLAPGTIVILHDGIADPSRSIAALPGILEAGRGKGLRFVSVGTLVRS
Ga0318533_106822841	3300032059	Soil	IEKNLAPGTIVILHDGISNPSRTIAALPHILAAGRQRGLRFFSIGELISAGSS