Metagenome Family F099595

Overview

Basic Information

• Family ID: F099595
• Family Type: Metagenome
• Number of Sequences: 103
• Average Sequence Length: 41 residues
• Representative Sequence: DALPAARVRARLRYDKLIRAAAKEISNKNRDTLREMVADE
• Number of Associated Samples: 67
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 88.35 %
• Associated GOLD sequencing projects: 58
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (75.728 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (66.990 % of family members)
• Environment Ontology (ENVO): Unclassified (65.049 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (67.961 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 87.50%
  β-sheet: 0.00%
  Coil/Unstructured: 12.50%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12728	HTH_17	26.21
PF11843	DUF3363	10.68
PF03432	Relaxase	7.77
PF00589	Phage_integrase	4.85
PF03972	MmgE_PrpD	0.97
PF13102	Phage_int_SAM_5	0.97
PF13620	CarboxypepD_reg	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3843	Type IV secretory pathway, VirD2 component (relaxase)	Intracellular trafficking, secretion, and vesicular transport [U]	7.77
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.73 %
Unclassified	root	N/A	24.27 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.73 %
Unclassified	root	N/A	24.27 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.73 %
Unclassified	root	N/A	24.27 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.90 %
Unclassified	root	N/A	24.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	57.28 %
Unclassified	root	N/A	24.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.28 %
Unclassified	root	N/A	24.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.28 %
Unclassified	root	N/A	24.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001593|JGI12635J15846_10199839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323
3300001593|JGI12635J15846_10906100	All Organisms → cellular organisms → Bacteria → Acidobacteria	503
3300002914|JGI25617J43924_10014060	All Organisms → cellular organisms → Bacteria	2677
3300002914|JGI25617J43924_10024411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2115
3300002914|JGI25617J43924_10267260	Not Available	582
3300002914|JGI25617J43924_10284416	Not Available	566
3300005545|Ga0070695_100140427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1674
3300005554|Ga0066661_10078775	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937
3300005610|Ga0070763_10181640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114
3300006086|Ga0075019_10604488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688
3300006176|Ga0070765_100404656	All Organisms → cellular organisms → Bacteria	1274
3300006794|Ga0066658_10626284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588
3300006893|Ga0073928_10696854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709
3300007265|Ga0099794_10046487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2079
3300009038|Ga0099829_11346376	Not Available	590
3300009038|Ga0099829_11449797	All Organisms → cellular organisms → Bacteria → Acidobacteria	567
3300009038|Ga0099829_11499775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557
3300009038|Ga0099829_11805129	Not Available	500
3300009088|Ga0099830_11861429	Not Available	503
3300009089|Ga0099828_10268893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531
3300009090|Ga0099827_11697154	Not Available	550
3300011269|Ga0137392_10744200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811
3300011269|Ga0137392_10767101	Not Available	797
3300011269|Ga0137392_11347285	Not Available	573
3300011269|Ga0137392_11503352	Not Available	532
3300011269|Ga0137392_11567359	Not Available	517
3300011270|Ga0137391_10137238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2127
3300011270|Ga0137391_10558277	All Organisms → cellular organisms → Bacteria → Acidobacteria	964
3300011271|Ga0137393_10807841	Not Available	802
3300011271|Ga0137393_11467842	Not Available	571
3300011271|Ga0137393_11800563	Not Available	500
3300012096|Ga0137389_10591005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954
3300012096|Ga0137389_11630153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541
3300012189|Ga0137388_10824074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	859
3300012189|Ga0137388_10996617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773
3300012189|Ga0137388_11978332	Not Available	511
3300012200|Ga0137382_10158943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536
3300012201|Ga0137365_10874499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656
3300012202|Ga0137363_10015378	All Organisms → cellular organisms → Bacteria	5008
3300012202|Ga0137363_11740393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516
3300012203|Ga0137399_10194404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1644
3300012205|Ga0137362_10301336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1387
3300012205|Ga0137362_10962502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728
3300012205|Ga0137362_11142596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661
3300012205|Ga0137362_11570103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545
3300012210|Ga0137378_10176923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1983
3300012210|Ga0137378_10815936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845
3300012211|Ga0137377_11800379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532
3300012211|Ga0137377_11867256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519
3300012359|Ga0137385_11525871	Not Available	532
3300012361|Ga0137360_10199412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1619
3300012361|Ga0137360_11258678	Not Available	640
3300012363|Ga0137390_10748941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937
3300012363|Ga0137390_11491454	All Organisms → cellular organisms → Bacteria → Acidobacteria	617
3300012363|Ga0137390_11899144	Not Available	524
3300012363|Ga0137390_11937051	Not Available	517
3300012582|Ga0137358_10085664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2124
3300012683|Ga0137398_11136599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536
3300012685|Ga0137397_10400879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022
3300012917|Ga0137395_10517062	Not Available	860
3300012918|Ga0137396_10162600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630
3300012923|Ga0137359_11395896	All Organisms → cellular organisms → Bacteria → Proteobacteria	588
3300012923|Ga0137359_11436402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578
3300012925|Ga0137419_11098766	All Organisms → cellular organisms → Bacteria → Acidobacteria	662
3300012925|Ga0137419_11271065	All Organisms → cellular organisms → Bacteria → Acidobacteria	618
3300012927|Ga0137416_11760818	Not Available	566
3300012929|Ga0137404_12040019	Not Available	535
3300012930|Ga0137407_10846932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	864
3300014155|Ga0181524_10118612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434
3300015054|Ga0137420_1133091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967
3300015241|Ga0137418_10160478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1974
3300015264|Ga0137403_10387448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279
3300018433|Ga0066667_10644136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886
3300018433|Ga0066667_11133086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678
3300018482|Ga0066669_11224045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678
3300020579|Ga0210407_10552948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898
3300020583|Ga0210401_10275636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542
3300021086|Ga0179596_10546808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587
3300021171|Ga0210405_10065351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2870
3300021407|Ga0210383_10098574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2458
3300021479|Ga0210410_10684517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906
3300021559|Ga0210409_11694998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508
3300024330|Ga0137417_1159896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996
3300026551|Ga0209648_10062504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3154
3300026551|Ga0209648_10600640	Not Available	606
3300026551|Ga0209648_10763273	Not Available	528
3300026557|Ga0179587_10115288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642
3300026557|Ga0179587_10856779	Not Available	599
3300027643|Ga0209076_1001118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5308
3300027729|Ga0209248_10255200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510
3300027737|Ga0209038_10116867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807
3300027846|Ga0209180_10008986	All Organisms → cellular organisms → Bacteria	5129
3300027846|Ga0209180_10209211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124
3300027882|Ga0209590_10361665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	936
3300028536|Ga0137415_10161654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2073
3300028536|Ga0137415_10255814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1559
3300028536|Ga0137415_10889733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700
3300028906|Ga0308309_10322886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310
3300031236|Ga0302324_103608842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500
3300031670|Ga0307374_10345517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901
3300031671|Ga0307372_10360566	Not Available	770
3300031753|Ga0307477_10123052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1809
3300031754|Ga0307475_11558549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.15%
Aquatic	Environmental → Aquatic	4.85%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.17%
Freshwater	Environmental → Aquatic → Freshwater	2.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%
Sediment	Environmental → Aquatic → Sediment	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.41%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.91%
Clay	Environmental → Terrestrial → Soil → Clay	1.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	66.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101998391	3300001593	Forest Soil	DALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMIADE*
JGI12635J15846_109061001	3300001593	Forest Soil	RVRARLRYDKLIRAAAKELSNKNRDTLREMVADE*
JGI25617J43924_100140605	3300002914	Grasslands Soil	EPPEDALPAARVRARLRYDKLIRAAAKEISNKNRDTLREMLADE*
JGI25617J43924_100244114	3300002914	Grasslands Soil	ALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
JGI25617J43924_102672601	3300002914	Grasslands Soil	EPPEDALPAARVRARLRYDKLIRAAAKEISNKNRDTLRQMVADD*
JGI25617J43924_102844162	3300002914	Grasslands Soil	ALPAARVRARLRYDKLIRAAAKELSNKNRDTLRAMLADD*
Ga0070695_1001404271	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PPDDALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE*
Ga0066661_100787753	3300005554	Soil	AARVRARLRYEKLVRAAAEGISNKNRETLKGMVADE*
Ga0070763_101816402	3300005610	Soil	RVRARLRYEKLLRAAAEGISTKNKETLKGMMIDE*
Ga0075019_106044882	3300006086	Watersheds	PEDALPAARVRARLRYDKLIRVAAKELSNKNRDTLREMLADD*
Ga0070765_1004046563	3300006176	Soil	VEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY*
Ga0066658_106262841	3300006794	Soil	PAARVRARLRYEKLVRAAAEGISNKNRETLRGMVSDE*
Ga0073928_106968541	3300006893	Iron-Sulfur Acid Spring	DALPAARVRARLRYDKLIRAAAKELSNKNRDTLRGDGSR*
Ga0099794_100464875	3300007265	Vadose Zone Soil	DALPAARVRARLRYDKLIRAAAKEISNKNRDTLREMVADE*
Ga0099829_113463761	3300009038	Vadose Zone Soil	PPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVAND*
Ga0099829_114497971	3300009038	Vadose Zone Soil	DALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0099829_114997752	3300009038	Vadose Zone Soil	PEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADD*
Ga0099829_118051292	3300009038	Vadose Zone Soil	ARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0099830_118614291	3300009088	Vadose Zone Soil	DDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREILADE*
Ga0099828_102688931	3300009089	Vadose Zone Soil	PEDALPAARVRARLRYQKLVRAAAKEISNKNRDTLREMLADE*
Ga0099827_116971542	3300009090	Vadose Zone Soil	VEPPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRAMVTDE*
Ga0137392_107442001	3300011269	Vadose Zone Soil	PDDALPSARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE*
Ga0137392_107671011	3300011269	Vadose Zone Soil	ARVRARLRYEKLVRAAAKEISNKNRDTLREMVVDY*
Ga0137392_113472852	3300011269	Vadose Zone Soil	PAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
Ga0137392_115033521	3300011269	Vadose Zone Soil	ALRAARVRARLRYDHLIRAAAKELSNKNRDTLREMVADD*
Ga0137392_115673591	3300011269	Vadose Zone Soil	PEDALPAALVRARLRYEKLVRAAAEGISNKNKDTLKGMVADE*
Ga0137391_101372384	3300011270	Vadose Zone Soil	AARVRARLRYDKLIRAAARELSNKNRDTLRAILADE*
Ga0137391_105582773	3300011270	Vadose Zone Soil	DALPAARVRARLRYDKLVRAAAQEISNKNRNTLREMVADE*
Ga0137393_108078412	3300011271	Vadose Zone Soil	EPPEDALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMVVDY*
Ga0137393_114678422	3300011271	Vadose Zone Soil	VVEPPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
Ga0137393_118005631	3300011271	Vadose Zone Soil	PDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREILADE*
Ga0137389_105910051	3300012096	Vadose Zone Soil	DDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
Ga0137389_116301532	3300012096	Vadose Zone Soil	RVRARLRYEKLVRAAAKEISNKNRDTLREMVADD*
Ga0137388_108240741	3300012189	Vadose Zone Soil	RVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0137388_109966172	3300012189	Vadose Zone Soil	VVEPPDDALPAARVRARLRYDKLIRAAAKEISNKNRDTLREMVADE*
Ga0137388_119783322	3300012189	Vadose Zone Soil	LPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0137382_101589431	3300012200	Vadose Zone Soil	RVRARLCYEKLVRAAAEGISTKNRDTLKGMVADE*
Ga0137365_108744991	3300012201	Vadose Zone Soil	EDALPAARVRARLRYDKLIRAAAKELSNRNRDTLREMVAND*
Ga0137363_100153781	3300012202	Vadose Zone Soil	PVDALPAARVRVRLRYEKLVRSAAEGISNKNRDTLKGMVVDE*
Ga0137363_117403931	3300012202	Vadose Zone Soil	ARVRARLRYEKLIRAAAKELSNKNRDTLREMLADD*
Ga0137399_101944042	3300012203	Vadose Zone Soil	EDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADD*
Ga0137362_103013361	3300012205	Vadose Zone Soil	AARVRARLRYEKLVRAAAKEISNKNRDTLREMIADE*
Ga0137362_109625021	3300012205	Vadose Zone Soil	PEDALPAARVRARLRYEKLVRAAAEGISNKNRDTLKGMVADE*
Ga0137362_111425962	3300012205	Vadose Zone Soil	TCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRTMVADE*
Ga0137362_115701032	3300012205	Vadose Zone Soil	VEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADD*
Ga0137378_101769234	3300012210	Vadose Zone Soil	PPEDALPAARVRARLRYDKLIRTAAKELSNKNRDTLREMVADY*
Ga0137378_108159361	3300012210	Vadose Zone Soil	ITCVVEPPEDALPAARVRARLRYDKLIRAAAQELSNKNRDTLREMVAND*
Ga0137377_118003791	3300012211	Vadose Zone Soil	LPAARVRARLRYEKLVRAAAEGISNKNRDTLKGMVADE*
Ga0137377_118672561	3300012211	Vadose Zone Soil	ARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY*
Ga0137385_115258711	3300012359	Vadose Zone Soil	ITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVAND*
Ga0137360_101994123	3300012361	Vadose Zone Soil	VVEPPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRGMLADY*
Ga0137360_112586782	3300012361	Vadose Zone Soil	RTVALEDALLAARARPRLRYERLVRAAAEGISNKNRETLKGMVADE*
Ga0137390_107489411	3300012363	Vadose Zone Soil	TDVLLKYVITCVVEPPEDALPAARVRARLRYDKLIRAAARELSNKNRDTLRAILADE*
Ga0137390_114914542	3300012363	Vadose Zone Soil	YVITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0137390_118991442	3300012363	Vadose Zone Soil	CVVEPPEDALPAARVRARLRYDKLIRAAAKEISNKNRDTLRAMLADD*
Ga0137390_119370511	3300012363	Vadose Zone Soil	CVVEPPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREILADE*
Ga0137358_100856644	3300012582	Vadose Zone Soil	YVITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRAILADE*
Ga0137398_111365991	3300012683	Vadose Zone Soil	LPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY*
Ga0137397_104008791	3300012685	Vadose Zone Soil	LPAARVRARLRYEKLVRPAAEGISNKNRDTFKRMVADE*
Ga0137395_105170621	3300012917	Vadose Zone Soil	AARVRARLRYDKLIRAAAKELSNKNRDTLREMVVDY*
Ga0137396_101626003	3300012918	Vadose Zone Soil	EDALPAARVRARLRYDKLIRAAAKELSNKNRDTLKEMVADD*
Ga0137359_113958962	3300012923	Vadose Zone Soil	VITCVVEPPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY*
Ga0137359_114364021	3300012923	Vadose Zone Soil	IYPRRLVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0137419_110987662	3300012925	Vadose Zone Soil	LPAARVRARLRYDKLVRAAAKEISNKNRDTLREMVADD*
Ga0137419_112710652	3300012925	Vadose Zone Soil	VEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRGTLREMVSDD*
Ga0137416_117608181	3300012927	Vadose Zone Soil	EDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVVDY*
Ga0137404_120400191	3300012929	Vadose Zone Soil	ITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
Ga0137407_108469323	3300012930	Vadose Zone Soil	PAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADD*
Ga0181524_101186122	3300014155	Bog	LPAARVRARLRYEKLVRVAAKEISNKNRDTLREMLADE*
Ga0137420_11330913	3300015054	Vadose Zone Soil	ARVRARLRYDKLIRAAAKELSNKNRDTLREMVADE*
Ga0137418_101604781	3300015241	Vadose Zone Soil	AARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD*
Ga0137403_103874481	3300015264	Vadose Zone Soil	VVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY*
Ga0066667_106441361	3300018433	Grasslands Soil	HAARVRARLRYEKLVRAAAEGISNKNRETLKGMVADG
Ga0066667_111330861	3300018433	Grasslands Soil	ALPAARVRARLRYEKLVRAAAEGISNKNRETLRGMVSDE
Ga0066669_112240452	3300018482	Grasslands Soil	LPAARVRARLRYEKLVRAAAEGISNKNRETLKGMVADE
Ga0210407_105529482	3300020579	Soil	LPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0210401_102756361	3300020583	Soil	ALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0179596_105468081	3300021086	Vadose Zone Soil	PAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADE
Ga0210405_100653514	3300021171	Soil	DALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0210383_100985741	3300021407	Soil	ALPAARVRARLRYEKLVRAAAEGISNKNRETLKGMVADE
Ga0210410_106845171	3300021479	Soil	PPDDALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0210409_116949981	3300021559	Soil	PDDALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0137417_11598961	3300024330	Vadose Zone Soil	AARVRARLRYEKLVRAAAEGISNKNRETLKGMVADE
Ga0209648_100625041	3300026551	Grasslands Soil	CVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMLADY
Ga0209648_106006402	3300026551	Grasslands Soil	PEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD
Ga0209648_107632732	3300026551	Grasslands Soil	ARVRARLRYDKLIRAAAKELSDKNRDTLREMVADD
Ga0179587_101152881	3300026557	Vadose Zone Soil	PPEDALPAARVRARLRYEKLVRAAAEGISNKNRDTLKGMVADE
Ga0179587_108567791	3300026557	Vadose Zone Soil	TCVVEPPEDALPAARVRARLRYDKLIRAAAKEISNKNRDTLREMLADE
Ga0209076_10011181	3300027643	Vadose Zone Soil	ALPAARVRARLRYDKLIRAAAKELSNKNRDTLKEMVADD
Ga0209248_102552002	3300027729	Bog Forest Soil	DDALPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLADE
Ga0209038_101168672	3300027737	Bog Forest Soil	LPAARVRARLRYEKLVRAAAKEISNKNRDTLREMLTDA
Ga0209180_100089861	3300027846	Vadose Zone Soil	EPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRAMLADE
Ga0209180_102092111	3300027846	Vadose Zone Soil	PPDDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY
Ga0209590_103616651	3300027882	Vadose Zone Soil	PAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADD
Ga0137415_101616544	3300028536	Vadose Zone Soil	ITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLRAILADE
Ga0137415_102558142	3300028536	Vadose Zone Soil	YVITCVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADE
Ga0137415_108897331	3300028536	Vadose Zone Soil	ALPAARVRARLRYEKLVCADAEGISNKNRGTLKGMVADE
Ga0308309_103228861	3300028906	Soil	CVVEPPEDALPAARVRARLRYDKLIRAAAKELSNKNRDTLREMVADY
Ga0302324_1036088422	3300031236	Palsa	EPPEDALPAARIRARLRYEKLVRAAAEGISNKNRDTLKGMVADE
Ga0307374_103455171	3300031670	Soil	VEPPEDALPAARVRARLRYEKLVRAAAEGISNKNRDTLKGMVADE
Ga0307372_103605661	3300031671	Soil	AARIRARLRYEKLVRAAAEGISNKNRDTLKGMVADE
Ga0307477_101230521	3300031753	Hardwood Forest Soil	DALPAARVRARLRYQKLVRTAAKEISNKNRDTLREMLADE
Ga0307475_115585491	3300031754	Hardwood Forest Soil	EDALPAARVRARLRYEKLVRAAAEGISNKNRETLKGMVADE